Prupe.1G207000_v2.0.a1

Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl-tRNAi to 40S ribosomal subunits. In contrast to the eIF- 2 complex, it binds methionyl-tRNAi to 40 S subunits in a codon- dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40 S subunits in a GTP-dependent manner. May act by impiging the expression of specific proteins

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
21048974 .. 21054585
5612 bp
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UTR
Exon/CDS
Intron
Prupe.1G207000.1

Sequence Viewer

Length: 1554 bp
ATGGCAGCCTCTGAAACTGCCCCGCCTCTGGATATCTTAGTTCGTGGCCCAGAAGGGTTCTCGCTCTGGAATGGGCCCCCATTTAGCAATGGGCAACCTGGTATCAAGCTTGAAAACATTTCCTGCACAAGTACAAAATTCAGTGAAGATGGATCGAGGCTGATGGTGATGAAATCTGATTCAGTAATTAGCATATATGATTGCAGCAGCTACAGGGAGATCAGATCTTTTCAAATCCCCAATGTTGCTGCAGCTGCCTTGTCCCCACGTGGGACTTATGTGCAAACTTTTCAGAAATCATCAACGCCACAGGAGAAGAATGTCATCTTATGGAACACCGAGACTGGTGATCCTGTTTATCAACAATTCCAAAAGAACATGACAAAAGCTACATGGCCCTCAATTAGATTCAGCTCTGATGAAGCTGTTGCATGTCGATTGGCAACAAATGAGATACAATTTTTGGATGCTGGAGATTTCTCTAAACCATTTATATATCGGCTAAGAGTTCCTGGAGTGGCTGCATTTGAGCTTTCTAAGGCACCTGGCTCCCATGTGGCAGCATTTGTTCCAGAATCCAAGGGGATTCCTGCCAGTGTCCAGATATTTTCTTGTGCAAAAGCTGTACAGAGTCAACCTCTTGCTCGACGGAGTTTCTTCCGATGTTCATCAGTGCAACTGAATTGGAATAATGGCTCAACTGGGCTTTTAGTTGTGGTGCAGTCAGATGTTGATAAAACCAATCAGAGTTACTATGGGGAATCAAAGCTCAACTACCTGACAACAGATGGGACCCATGAAGGACTTGTGCCTCTTCGTAAAGAGGGGCCTGTTCATGATGTTCAGTGGTCATATTCTGGATCCGAATTTGCTGTAGTTTATGGCTTTATGCCTTCAAAAGCCACTGTGTTTGACAAGAAGTGCAATCCTCTTCTTGAGCTTGGAACGGGTCCGTACAATACCATCCGATGGAATCCGAAGGGAAAATTTCTGTGTTTGGCAGGCTTTGGTAACTTACCTGGTGATATGGCATTTTGGGACTATGGGGAGAAAAAACAGCTTGGGACAACTAGGGCTGAATTGTCTGTGACAAGCGAATGGTCTCCAGATGGATGCTATTTTATGACTGCGACAACTGCACCAAGACTTCAAGTTGATAATGGGATTAAGATTTTCCACCACAACGGGTCATTATTCTTCAAGAAGATGTTTGACAAGTTGTACCAGGCTGATTGGAAACCAGAGTCACCAGATAGGTTTGGTGACATTGCCGAACTTGTCAAGTCCATAGGATCATTAAAAGTTGTCGAAACGAAACCTCAAGGAGACAGGTCCAAAATTTCTCAGACCTCTGCAAAAGCTAGCGCTAGCAACCCTCCTGCCCAAAAGCCTGCTGCTTATCGGCCCCCACATGCTAAGAGTGCTGCTGCTGTTCAGGCTCAGCTGTTTGGAGAGAGCTCTACAGAGACGGTGAGCAAGAATGCATTGAAAAACAAGAAGAAAAGGGAGAAGCAAAGGGAGAAAAAGGCTGCTGAGGCTACCAGTGGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

518

Amino Acids

56.79

Weight (kDa)

9.17

Isoelectric Point (pI)

38.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010315)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 541
AccB7I CCANNNNNTGG 1 cut(s) 969
AciI CCGC 1 cut(s) 23
AclWI GGATC 5 cut(s) 160, 344, 855, 868, 1300
AcsI RAATTY 4 cut(s) 137, 866, 986, 1338
AcvI CACGTG 1 cut(s) 269
AfaI GTAC 5 cut(s) 133, 627, 956, 1223, 1549
AfeI AGCGCT 1 cut(s) 1366
AfiI CCNNNNNNNGG 3 cut(s) 28, 270, 969
AgsI TTSAA 6 cut(s) 113, 233, 897, 1151, 1201, 1489
AjnI CCWGG 5 cut(s) 97, 511, 544, 1018, 1224
Alw21I GWGCWC 1 cut(s) 1460
Alw26I GTCTC 4 cut(s) 335, 1107, 1320, 1460
AlwI GGATC 5 cut(s) 160, 344, 855, 868, 1300
AlwNI CAGNNNCTG 1 cut(s) 11
Aor51HI AGCGCT 1 cut(s) 1366
AoxI GGCC 5 cut(s) 46, 74, 395, 827, 1403
ApaI GGGCCC 1 cut(s) 78
ApoI RAATTY 4 cut(s) 137, 866, 986, 1338
AspLEI GCGC 1 cut(s) 1367
AspS9I GGNCC 9 cut(s) 47, 74, 75, 396, 792, 827, 950, 1332, 1404
AsuHPI GGTGA 6 cut(s) 178, 359, 1034, 1239, 1274, 1483
AsuNHI GCTAGC 2 cut(s) 1361, 1367
AvaII GGWCC 3 cut(s) 792, 950, 1332
BaeGI GKGCMC 1 cut(s) 78
BamHI GGATCC 1 cut(s) 860
BanI GGYRCC 1 cut(s) 541
BanII GRGCYC 2 cut(s) 78, 1460
BbrPI CACGTG 1 cut(s) 269
Bbv12I GWGCWC 1 cut(s) 1460
BbvCI CCTCAGC 1 cut(s) 1533
BccI CCATC 6 cut(s) 143, 157, 782, 963, 971, 1103
BciT130I CCWGG 5 cut(s) 99, 513, 546, 1020, 1226
BcoDI GTCTC 4 cut(s) 335, 1107, 1320, 1460
BfaI CTAG 3 cut(s) 1071, 1362, 1368
BfmI CTRYAG 4 cut(s) 211, 249, 873, 1461
BfoI RGCGCY 1 cut(s) 1368
BglII AGATCT 1 cut(s) 224
BlpI GCTNAGC 1 cut(s) 1440
Bme1390I CCNGG 5 cut(s) 99, 513, 546, 1020, 1226
Bme18I GGWCC 3 cut(s) 792, 950, 1332
BmgT120I GGNCC 9 cut(s) 47, 74, 75, 396, 792, 827, 950, 1332, 1404
BmrFI CCNGG 5 cut(s) 99, 513, 546, 1020, 1226
BmrI ACTGGG 1 cut(s) 711
BmsI GCATC 2 cut(s) 457, 1103
BmtI GCTAGC 2 cut(s) 1365, 1371
BmuI ACTGGG 1 cut(s) 711
BplI GAGNNNNNCTC 2 cut(s) 622, 654
BpmI CTGGAG 3 cut(s) 492, 534, 1089
Bpu10I CCTNAGC 1 cut(s) 1533
Bpu1102I GCTNAGC 1 cut(s) 1440
BpuEI CTTGAG 2 cut(s) 956, 1305
BsaAI YACGTR 1 cut(s) 269
BsaBI GATNNNNATC 1 cut(s) 667
BsaI GGTCTC 1 cut(s) 1107
BsaJI CCNNGG 1 cut(s) 579
Bsc4I CCNNNNNNNGG 3 cut(s) 28, 270, 969
Bse1I ACTGG 4 cut(s) 349, 594, 706, 1542
Bse3DI GCAATG 2 cut(s) 94, 1266
Bse8I GATNNNNATC 1 cut(s) 667
BseBI CCWGG 5 cut(s) 99, 513, 546, 1020, 1226
BseDI CCNNGG 1 cut(s) 579
BseGI GGATG 3 cut(s) 472, 963, 1118
BseJI GATNNNNATC 1 cut(s) 667
BseLI CCNNNNNNNGG 3 cut(s) 28, 270, 969
BseMI GCAATG 2 cut(s) 94, 1266
BseMII CTCAG 3 cut(s) 1358, 1454, 1524
BseNI ACTGG 4 cut(s) 349, 594, 706, 1542
BseSI GKGCMC 1 cut(s) 78
BsgI GTGCAG 3 cut(s) 109, 740, 1122
BshFI GGCC 5 cut(s) 48, 76, 397, 829, 1405
BshNI GGYRCC 1 cut(s) 541
BsiHKAI GWGCWC 1 cut(s) 1460
BslFI GGGAC 5 cut(s) 247, 286, 805, 1052, 1078
BslI CCNNNNNNNGG 3 cut(s) 28, 270, 969
BsmAI GTCTC 4 cut(s) 335, 1107, 1320, 1460
BsmBI CGTCTC 1 cut(s) 1460
BsmFI GGGAC 5 cut(s) 247, 286, 805, 1052, 1078
BsmI GAATGC 1 cut(s) 1486
BsnI GGCC 5 cut(s) 48, 76, 397, 829, 1405
Bso31I GGTCTC 1 cut(s) 1107
Bsp120I GGGCCC 1 cut(s) 74
Bsp1286I GDGCHC 2 cut(s) 78, 1460
Bsp1407I TGTACA 1 cut(s) 625
Bsp143I GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
Bsp1720I GCTNAGC 1 cut(s) 1440
BspACI CCGC 1 cut(s) 23
BspANI GGCC 5 cut(s) 48, 76, 397, 829, 1405
BspCNI CTCAG 3 cut(s) 1357, 1453, 1525
BspHI TCATGA 1 cut(s) 835
BspMAI CTGCAG 1 cut(s) 253
BspOI GCTAGC 2 cut(s) 1365, 1371
BspPI GGATC 5 cut(s) 160, 344, 855, 868, 1300
BspT107I GGYRCC 1 cut(s) 541
BspTNI GGTCTC 1 cut(s) 1107
BsrDI GCAATG 2 cut(s) 94, 1266
BsrGI TGTACA 1 cut(s) 625
BsrI ACTGG 4 cut(s) 349, 594, 706, 1542
BssECI CCNNGG 1 cut(s) 579
BssMI GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
BssT1I CCWWGG 1 cut(s) 579
Bst2UI CCWGG 5 cut(s) 99, 513, 546, 1020, 1226
Bst4CI ACNGT 2 cut(s) 907, 1471
Bst6I CTCTTC 2 cut(s) 819, 936
BstAUI TGTACA 1 cut(s) 625
BstBAI YACGTR 1 cut(s) 269
BstC8I GCNNGC 4 cut(s) 1003, 1363, 1369, 1392
BstDEI CTNAG 7 cut(s) 37, 503, 537, 1344, 1416, 1440, 1533
BstF5I GGATG 3 cut(s) 472, 963, 1118
BstH2I RGCGCY 1 cut(s) 1368
BstHHI GCGC 1 cut(s) 1367
BstKTI GATC 6 cut(s) 155, 222, 227, 352, 863, 1295
BstMAI GTCTC 4 cut(s) 335, 1107, 1320, 1460
BstMBI GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
BstMWI GCNNNNNNNGC 5 cut(s) 254, 1136, 1421, 1436, 1535
BstNI CCWGG 5 cut(s) 99, 513, 546, 1020, 1226
BstNSI RCATGY 2 cut(s) 435, 1415
BstSCI CCNGG 5 cut(s) 97, 511, 544, 1018, 1224
BstSFI CTRYAG 4 cut(s) 211, 249, 873, 1461
BstSLI GKGCMC 1 cut(s) 78
BstX2I RGATCY 2 cut(s) 224, 860
BstYI RGATCY 2 cut(s) 224, 860
BsuRI GGCC 5 cut(s) 48, 76, 397, 829, 1405
BtsCI GGATG 3 cut(s) 472, 963, 1118
BtsIMutI CAGTG 6 cut(s) 148, 601, 678, 851, 903, 1549
Cac8I GCNNGC 4 cut(s) 1003, 1363, 1369, 1392
CaiI CAGNNNCTG 1 cut(s) 11
CciI TCATGA 1 cut(s) 835
CfoI GCGC 1 cut(s) 1367
Cfr13I GGNCC 9 cut(s) 47, 74, 75, 396, 792, 827, 950, 1332, 1404
CsiI ACCWGGT 2 cut(s) 97, 1018
Csp6I GTAC 5 cut(s) 132, 626, 955, 1222, 1548
CspCI CAANNNNNGTGG 2 cut(s) 892, 927
CviAII CATG 7 cut(s) 379, 393, 432, 554, 797, 836, 1412
CviQI GTAC 5 cut(s) 132, 626, 955, 1222, 1548
DdeI CTNAG 7 cut(s) 37, 503, 537, 1344, 1416, 1440, 1533
DpnI GATC 6 cut(s) 154, 221, 226, 351, 862, 1294
DpnII GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
Eam1104I CTCTTC 2 cut(s) 819, 936
EarI CTCTTC 2 cut(s) 819, 936
Ecl136II GAGCTC 1 cut(s) 1458
Eco130I CCWWGG 1 cut(s) 579
Eco24I GRGCYC 2 cut(s) 78, 1460
Eco31I GGTCTC 1 cut(s) 1107
Eco32I GATATC 1 cut(s) 34
Eco47I GGWCC 3 cut(s) 792, 950, 1332
Eco47III AGCGCT 1 cut(s) 1366
Eco53kI GAGCTC 1 cut(s) 1458
Eco72I CACGTG 1 cut(s) 269
EcoICRI GAGCTC 1 cut(s) 1458
EcoO109I RGGNCCY 3 cut(s) 75, 792, 827
EcoRII CCWGG 5 cut(s) 97, 511, 544, 1018, 1224
EcoRV GATATC 1 cut(s) 34
EcoT14I CCWWGG 1 cut(s) 579
EcoT22I ATGCAT 1 cut(s) 1486
EcoT38I GRGCYC 2 cut(s) 78, 1460
ErhI CCWWGG 1 cut(s) 579
Esp3I CGTCTC 1 cut(s) 1460
FaeI CATG 7 cut(s) 382, 396, 435, 557, 800, 839, 1415
FaqI GGGAC 5 cut(s) 247, 286, 805, 1052, 1078
FatI CATG 7 cut(s) 378, 392, 431, 553, 796, 835, 1411
FauI CCCGC 1 cut(s) 30
FokI GGATG 3 cut(s) 479, 950, 1125
FriOI GRGCYC 2 cut(s) 78, 1460
FspBI CTAG 3 cut(s) 1071, 1362, 1368
GlaI GCGC 1 cut(s) 1366
GsuI CTGGAG 3 cut(s) 492, 534, 1089
HaeII RGCGCY 1 cut(s) 1368
HaeIII GGCC 5 cut(s) 48, 76, 397, 829, 1405
HhaI GCGC 1 cut(s) 1367
Hin1II CATG 7 cut(s) 382, 396, 435, 557, 800, 839, 1415
Hin6I GCGC 1 cut(s) 1365
HinP1I GCGC 1 cut(s) 1365
HincII GTYRAC 1 cut(s) 635
HindII GTYRAC 1 cut(s) 635
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 8 cut(s) 179, 408, 575, 586, 631, 761, 973, 1244
HphI GGTGA 6 cut(s) 178, 359, 1034, 1239, 1274, 1483
Hpy166II GTNNAC 1 cut(s) 635
Hpy188III TCNNGA 9 cut(s) 29, 67, 572, 601, 836, 858, 935, 1106, 1201
Hpy8I GTNNAC 1 cut(s) 635
Hpy99I CGWCG 1 cut(s) 651
HpyAV CCTTC 4 cut(s) 47, 794, 903, 973
HpyCH4III ACNGT 2 cut(s) 907, 1471
HpyCH4IV ACGT 1 cut(s) 268
HpyF10VI GCNNNNNNNGC 5 cut(s) 254, 1136, 1421, 1436, 1535
HpyF3I CTNAG 7 cut(s) 37, 503, 537, 1344, 1416, 1440, 1533
HpySE526I ACGT 1 cut(s) 268
Hsp92II CATG 7 cut(s) 382, 396, 435, 557, 800, 839, 1415
HspAI GCGC 1 cut(s) 1365
KflI GGGWCCC 1 cut(s) 792
Kzo9I GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
LmnI GCTCC 1 cut(s) 554
LweI GCATC 2 cut(s) 457, 1103
MabI ACCWGGT 2 cut(s) 97, 1018
MaeI CTAG 3 cut(s) 1071, 1362, 1368
MaeII ACGT 1 cut(s) 268
MaeIII GTNAC 5 cut(s) 749, 1010, 1087, 1245, 1262
MalI GATC 6 cut(s) 154, 221, 226, 351, 862, 1294
MboI GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
MboII GAAGA 8 cut(s) 158, 328, 649, 806, 923, 1189, 1216, 1510
MflI RGATCY 2 cut(s) 224, 860
MhlI GDGCHC 2 cut(s) 78, 1460
MlyI GAGTC 2 cut(s) 640, 1253
Mph1103I ATGCAT 1 cut(s) 1486
MseI TTAA 2 cut(s) 1167, 1298
MspA1I CMGCKG 2 cut(s) 254, 1444
MspR9I CCNGG 5 cut(s) 99, 513, 546, 1020, 1226
Mva1269I GAATGC 1 cut(s) 1486
MvaI CCWGG 5 cut(s) 99, 513, 546, 1020, 1226
MwoI GCNNNNNNNGC 5 cut(s) 254, 1136, 1421, 1436, 1535
NdeII GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
NheI GCTAGC 2 cut(s) 1361, 1367
NlaIII CATG 7 cut(s) 382, 396, 435, 557, 800, 839, 1415
NmuCI GTSAC 3 cut(s) 1087, 1245, 1262
NsiI ATGCAT 1 cut(s) 1486
NspI RCATGY 2 cut(s) 435, 1415
PagI TCATGA 1 cut(s) 835
PctI GAATGC 1 cut(s) 1486
PfeI GAWTC 6 cut(s) 179, 408, 575, 586, 761, 973
PflMI CCANNNNNTGG 1 cut(s) 969
PfoI TCCNGGA 1 cut(s) 511
PleI GAGTC 2 cut(s) 639, 1252
PmaCI CACGTG 1 cut(s) 269
PmlI CACGTG 1 cut(s) 269
PpsI GAGTC 2 cut(s) 639, 1252
Ppu21I YACGTR 1 cut(s) 269
PpuMI RGGWCCY 1 cut(s) 792
Psp124BI GAGCTC 1 cut(s) 1460
Psp5II RGGWCCY 1 cut(s) 792
Psp6I CCWGG 5 cut(s) 97, 511, 544, 1018, 1224
PspCI CACGTG 1 cut(s) 269
PspGI CCWGG 5 cut(s) 97, 511, 544, 1018, 1224
PspOMI GGGCCC 1 cut(s) 74
PspPI GGNCC 9 cut(s) 47, 74, 75, 396, 792, 827, 950, 1332, 1404
PspPPI RGGWCCY 1 cut(s) 792
PstI CTGCAG 1 cut(s) 253
PstNI CAGNNNCTG 1 cut(s) 11
PsuI RGATCY 2 cut(s) 224, 860
PvuII CAGCTG 2 cut(s) 254, 1444
RsaI GTAC 5 cut(s) 133, 627, 956, 1223, 1549
RsaNI GTAC 5 cut(s) 132, 626, 955, 1222, 1548
SacI GAGCTC 1 cut(s) 1460
SaqAI TTAA 2 cut(s) 1167, 1298
Sau3AI GATC 6 cut(s) 152, 219, 224, 349, 860, 1292
Sau96I GGNCC 9 cut(s) 47, 74, 75, 396, 792, 827, 950, 1332, 1404
SchI GAGTC 2 cut(s) 640, 1253
ScrFI CCNGG 5 cut(s) 99, 513, 546, 1020, 1226
SduI GDGCHC 2 cut(s) 78, 1460
SexAI ACCWGGT 2 cut(s) 97, 1018
SfaNI GCATC 2 cut(s) 457, 1103
SfcI CTRYAG 4 cut(s) 211, 249, 873, 1461
SinI GGWCC 3 cut(s) 792, 950, 1332
SmlI CTYRAG 2 cut(s) 935, 1320
SmoI CTYRAG 2 cut(s) 935, 1320
SsiI CCGC 1 cut(s) 23
SspMI CTAG 3 cut(s) 1071, 1362, 1368
SstI GAGCTC 1 cut(s) 1460
StyD4I CCNGG 5 cut(s) 97, 511, 544, 1018, 1224
StyI CCWWGG 1 cut(s) 579
TaaI ACNGT 2 cut(s) 907, 1471
TaiI ACGT 1 cut(s) 271
TaqI TCGA 4 cut(s) 155, 436, 646, 1308
TatI WGTACW 2 cut(s) 131, 625
TfiI GAWTC 6 cut(s) 179, 408, 575, 586, 761, 973
Tru1I TTAA 2 cut(s) 1167, 1298
Tru9I TTAA 2 cut(s) 1167, 1298
TscAI CASTG 6 cut(s) 148, 601, 678, 851, 910, 1549
TseFI GTSAC 3 cut(s) 1087, 1245, 1262
Tsp45I GTSAC 3 cut(s) 1087, 1245, 1262
TspDTI ATGAA 5 cut(s) 185, 435, 657, 813, 824
TspGWI ACGGA 2 cut(s) 664, 942
TspRI CASTG 6 cut(s) 148, 601, 678, 851, 910, 1549
Van91I CCANNNNNTGG 1 cut(s) 969
VpaK11BI GGWCC 3 cut(s) 792, 950, 1332
XapI RAATTY 4 cut(s) 137, 866, 986, 1338
XceI RCATGY 2 cut(s) 435, 1415
XspI CTAG 3 cut(s) 1071, 1362, 1368
Zsp2I ATGCAT 1 cut(s) 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.