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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g23980 |
| malus_domestica | MD16G1117200.v1.1 |
| prunus_persica | Prupe.1G229000_v2.0.a1 |
| pyrus_communis | pycom16g10040 |
| rosa_chinensis | RchiOBHm_Chr4g0430641 |
| rosa_laevigata | RLG00000006960 |
| rosa_multiflora | Rmu_sc0000131.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00372390 |
| rosa_rugosa | Rorug04G0245000 |
| rosa_samantha | Rh4AG301000 Rh4BG308100 Rh4CG325200 Rh4DG305700 |
| rosa_wichuraiana | Rw4G026120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 559 |
| AcoI | YGGCCR | 1 cut(s) | 364 |
| AcsI | RAATTY | 2 cut(s) | 424, 496 |
| AcuI | CTGAAG | 2 cut(s) | 214, 556 |
| AfaI | GTAC | 1 cut(s) | 127 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 507 |
| AgsI | TTSAA | 4 cut(s) | 110, 332, 352, 489 |
| AjnI | CCWGG | 2 cut(s) | 200, 506 |
| AluBI | AGCT | 3 cut(s) | 69, 348, 570 |
| AluI | AGCT | 3 cut(s) | 69, 348, 570 |
| AoxI | GGCC | 2 cut(s) | 101, 364 |
| ApeKI | GCWGC | 2 cut(s) | 285, 540 |
| ApoI | RAATTY | 2 cut(s) | 424, 496 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 336 |
| AsuC2I | CCSGG | 2 cut(s) | 138, 302 |
| AsuHPI | GGTGA | 2 cut(s) | 254, 404 |
| BalI | TGGCCA | 1 cut(s) | 366 |
| BbvI | GCAGC | 2 cut(s) | 297, 527 |
| BccI | CCATC | 2 cut(s) | 262, 375 |
| BceAI | ACGGC | 1 cut(s) | 116 |
| BciT130I | CCWGG | 2 cut(s) | 202, 508 |
| BcnI | CCSGG | 2 cut(s) | 138, 302 |
| BfaI | CTAG | 2 cut(s) | 75, 513 |
| BfmI | CTRYAG | 1 cut(s) | 453 |
| BisI | GCNGC | 2 cut(s) | 286, 541 |
| BlsI | GCNGC | 2 cut(s) | 287, 542 |
| Bme1390I | CCNGG | 4 cut(s) | 138, 202, 302, 508 |
| BmiI | GGNNCC | 1 cut(s) | 563 |
| BmrFI | CCNGG | 4 cut(s) | 138, 202, 302, 508 |
| BmsI | GCATC | 3 cut(s) | 74, 96, 123 |
| Bpu10I | CCTNAGC | 1 cut(s) | 566 |
| BpuEI | CTTGAG | 1 cut(s) | 49 |
| BpuMI | CCSGG | 2 cut(s) | 138, 302 |
| BsaJI | CCNNGG | 3 cut(s) | 200, 300, 506 |
| BsaWI | WCCGGW | 1 cut(s) | 414 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 253, 283 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 507 |
| BseBI | CCWGG | 2 cut(s) | 202, 508 |
| BseDI | CCNNGG | 3 cut(s) | 200, 300, 506 |
| BseGI | GGATG | 3 cut(s) | 87, 89, 254 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 507 |
| BseXI | GCAGC | 2 cut(s) | 297, 527 |
| BshFI | GGCC | 2 cut(s) | 103, 366 |
| BsiSI | CCGG | 3 cut(s) | 138, 302, 415 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 507 |
| BsnI | GGCC | 2 cut(s) | 103, 366 |
| Bsp143I | GATC | 1 cut(s) | 244 |
| BspACI | CCGC | 1 cut(s) | 559 |
| BspANI | GGCC | 2 cut(s) | 103, 366 |
| BspHI | TCATGA | 1 cut(s) | 340 |
| BspLI | GGNNCC | 1 cut(s) | 563 |
| BssECI | CCNNGG | 3 cut(s) | 200, 300, 506 |
| BssMI | GATC | 1 cut(s) | 244 |
| Bst2UI | CCWGG | 2 cut(s) | 202, 508 |
| Bst4CI | ACNGT | 1 cut(s) | 130 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstC8I | GCNNGC | 3 cut(s) | 145, 364, 545 |
| BstDEI | CTNAG | 2 cut(s) | 45, 566 |
| BstF5I | GGATG | 3 cut(s) | 87, 89, 254 |
| BstKTI | GATC | 1 cut(s) | 247 |
| BstMBI | GATC | 1 cut(s) | 244 |
| BstNI | CCWGG | 2 cut(s) | 202, 508 |
| BstSCI | CCNGG | 4 cut(s) | 136, 200, 300, 506 |
| BstSFI | CTRYAG | 1 cut(s) | 453 |
| BstV1I | GCAGC | 2 cut(s) | 297, 527 |
| BsuRI | GGCC | 2 cut(s) | 103, 366 |
| BtsCI | GGATG | 3 cut(s) | 87, 89, 254 |
| BtsIMutI | CAGTG | 3 cut(s) | 93, 238, 580 |
| Cac8I | GCNNGC | 3 cut(s) | 145, 364, 545 |
| CciI | TCATGA | 1 cut(s) | 340 |
| Csp6I | GTAC | 1 cut(s) | 126 |
| CviAII | CATG | 1 cut(s) | 341 |
| CviJI | RGCY | 7 cut(s) | 69, 103, 288, 348, 362, 366, 570 |
| CviKI_1 | RGCY | 7 cut(s) | 69, 103, 288, 348, 362, 366, 570 |
| CviQI | GTAC | 1 cut(s) | 126 |
| DdeI | CTNAG | 2 cut(s) | 45, 566 |
| DpnI | GATC | 1 cut(s) | 246 |
| DpnII | GATC | 1 cut(s) | 244 |
| EaeI | YGGCCR | 1 cut(s) | 364 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| Eco57I | CTGAAG | 2 cut(s) | 214, 556 |
| EcoRII | CCWGG | 2 cut(s) | 200, 506 |
| EcoT22I | ATGCAT | 1 cut(s) | 89 |
| FaeI | CATG | 1 cut(s) | 344 |
| FaiI | YATR | 7 cut(s) | 182, 293, 342, 384, 445, 447, 464 |
| FatI | CATG | 1 cut(s) | 340 |
| FauNDI | CATATG | 1 cut(s) | 445 |
| Fnu4HI | GCNGC | 2 cut(s) | 286, 541 |
| FokI | GGATG | 3 cut(s) | 74, 96, 241 |
| Fsp4HI | GCNGC | 2 cut(s) | 286, 541 |
| FspBI | CTAG | 2 cut(s) | 75, 513 |
| GluI | GCNGC | 2 cut(s) | 286, 541 |
| HaeIII | GGCC | 2 cut(s) | 103, 366 |
| HapII | CCGG | 3 cut(s) | 138, 302, 415 |
| Hin1II | CATG | 1 cut(s) | 344 |
| HindIII | AAGCTT | 3 cut(s) | 67, 346, 568 |
| HinfI | GANTC | 5 cut(s) | 35, 209, 386, 398, 449 |
| HpaII | CCGG | 3 cut(s) | 138, 302, 415 |
| HphI | GGTGA | 2 cut(s) | 254, 404 |
| Hpy166II | GTNNAC | 1 cut(s) | 152 |
| Hpy188I | TCNGA | 5 cut(s) | 196, 214, 391, 473, 502 |
| Hpy188III | TCNNGA | 3 cut(s) | 110, 341, 371 |
| Hpy8I | GTNNAC | 1 cut(s) | 152 |
| HpyCH4III | ACNGT | 1 cut(s) | 130 |
| HpyCH4V | TGCA | 4 cut(s) | 87, 143, 184, 533 |
| HpyF3I | CTNAG | 2 cut(s) | 45, 566 |
| Hsp92II | CATG | 1 cut(s) | 344 |
| Kzo9I | GATC | 1 cut(s) | 244 |
| Lsp1109I | GCAGC | 2 cut(s) | 297, 527 |
| LweI | GCATC | 3 cut(s) | 74, 96, 123 |
| MaeI | CTAG | 2 cut(s) | 75, 513 |
| MaeIII | GTNAC | 1 cut(s) | 48 |
| MalI | GATC | 1 cut(s) | 246 |
| MboI | GATC | 1 cut(s) | 244 |
| MboII | GAAGA | 5 cut(s) | 30, 183, 220, 233, 393 |
| MlsI | TGGCCA | 1 cut(s) | 366 |
| MluCI | AATT | 6 cut(s) | 7, 120, 185, 332, 424, 496 |
| MluNI | TGGCCA | 1 cut(s) | 366 |
| MlyI | GAGTC | 2 cut(s) | 29, 395 |
| MmeI | TCCRAC | 1 cut(s) | 369 |
| MnlI | CCTC | 4 cut(s) | 101, 169, 352, 573 |
| Mox20I | TGGCCA | 1 cut(s) | 366 |
| Mph1103I | ATGCAT | 1 cut(s) | 89 |
| MroXI | GAANNNNTTC | 1 cut(s) | 336 |
| MscI | TGGCCA | 1 cut(s) | 366 |
| Msp20I | TGGCCA | 1 cut(s) | 366 |
| MspI | CCGG | 3 cut(s) | 138, 302, 415 |
| MspR9I | CCNGG | 4 cut(s) | 138, 202, 302, 508 |
| MvaI | CCWGG | 2 cut(s) | 202, 508 |
| NciI | CCSGG | 2 cut(s) | 138, 302 |
| NdeI | CATATG | 1 cut(s) | 445 |
| NdeII | GATC | 1 cut(s) | 244 |
| NlaIII | CATG | 1 cut(s) | 344 |
| NlaIV | GGNNCC | 1 cut(s) | 563 |
| NmuCI | GTSAC | 1 cut(s) | 48 |
| NsiI | ATGCAT | 1 cut(s) | 89 |
| PagI | TCATGA | 1 cut(s) | 340 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 498 |
| PdmI | GAANNNNTTC | 1 cut(s) | 336 |
| PfeI | GAWTC | 3 cut(s) | 209, 398, 449 |
| PkrI | GCNGC | 2 cut(s) | 287, 542 |
| PleI | GAGTC | 2 cut(s) | 29, 394 |
| PpsI | GAGTC | 2 cut(s) | 29, 394 |
| Psp6I | CCWGG | 2 cut(s) | 200, 506 |
| PspGI | CCWGG | 2 cut(s) | 200, 506 |
| PspN4I | GGNNCC | 1 cut(s) | 563 |
| RsaI | GTAC | 1 cut(s) | 127 |
| RsaNI | GTAC | 1 cut(s) | 126 |
| SatI | GCNGC | 2 cut(s) | 286, 541 |
| Sau3AI | GATC | 1 cut(s) | 244 |
| SchI | GAGTC | 2 cut(s) | 29, 395 |
| ScrFI | CCNGG | 4 cut(s) | 138, 202, 302, 508 |
| SetI | ASST | 5 cut(s) | 71, 206, 350, 567, 572 |
| SfaNI | GCATC | 3 cut(s) | 74, 96, 123 |
| SfcI | CTRYAG | 1 cut(s) | 453 |
| SmlI | CTYRAG | 1 cut(s) | 64 |
| SmoI | CTYRAG | 1 cut(s) | 64 |
| Sse9I | AATT | 6 cut(s) | 7, 120, 185, 332, 424, 496 |
| SsiI | CCGC | 1 cut(s) | 559 |
| SspMI | CTAG | 2 cut(s) | 75, 513 |
| StyD4I | CCNGG | 4 cut(s) | 136, 200, 300, 506 |
| TaaI | ACNGT | 1 cut(s) | 130 |
| TasI | AATT | 6 cut(s) | 7, 120, 185, 332, 424, 496 |
| TfiI | GAWTC | 3 cut(s) | 209, 398, 449 |
| TscAI | CASTG | 3 cut(s) | 100, 238, 580 |
| TseFI | GTSAC | 1 cut(s) | 48 |
| TseI | GCWGC | 2 cut(s) | 285, 540 |
| Tsp45I | GTSAC | 1 cut(s) | 48 |
| TspDTI | ATGAA | 3 cut(s) | 329, 357, 462 |
| TspRI | CASTG | 3 cut(s) | 100, 238, 580 |
| XapI | RAATTY | 2 cut(s) | 424, 496 |
| XmnI | GAANNNNTTC | 1 cut(s) | 336 |
| XspI | CTAG | 2 cut(s) | 75, 513 |
| Zsp2I | ATGCAT | 1 cut(s) | 89 |