Rorug04G0245000

Pre-mRNA-splicing factor ATP-dependent RNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0002001
Physical Location & Seq
Forward (+)
41499353 .. 41503843
4491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0245000.1

Sequence Viewer

Length: 771 bp
ATGGCCAGGTACCGGAGCCGCAGCCGCAGCCTGAGCAGAAGCTACAGCCCCCCTCGCCGGCGTAGCAGAACTCCGCCACGTGGACGCAAGCGATACGACGACGACGACGAGCCTCGCGACCGCTACCGTGACAGCCGCTCTTACCGAGACCGCCGCTCACCGGCTCCGTCTGGCTTGCTCGTTCGCAATCTTCCTCTTGACGCTAGGTCAGATGATCTTAGGATCCCTTTTGAGCGCTTTGGTCCAGTGAAGGATGTGTATCTTCCTAAGAATTACTACACCCGGGAGCCACGGGGCTTTGGCTTTGTGAAGTACCGTTATGCAGAGGACGCAGCTGAAGCAAAGCAACAAATGAACCATAAACTTATTGGTGGACGTGAAATAAGGATTGTTTTTGCTGAGGAGAACAGAAAAACTCCCCAAGAAATGCGCACAACAACTCGTGTAAGTGGAGGAAGCTCTAGAAGAAGAAGAACTCCACCTAGGTCTCCAAGACGGCAATATCGTTCCTACTCCCAGTCAGTTTCACCTCTTAGGCGCGACTCAAGGGACCATGGAGCTAGGGATCATTATCGTTCCCCCGTGCAGTCTAGATCAATTTCACGATCTCCTTCACCACACGATGAAAGAGACTACAGGCGGTCCCCAAGTCCAAGGGATAACGGTCAGGATCTGCGTGATGAGAGAGTCTATGCACCTAGAAGGTTAAGGAGTCCAAGGGGTAATAGGCACAGTCCTATGTCACGCTCACGGTCATACAGTCCTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0002376 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0007389 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009817 GO:0009888 GO:0009892 GO:0009893 GO:0009987 GO:0010015 GO:0010033 GO:0010051 GO:0010053 GO:0010054 GO:0010154 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016049 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0031047 GO:0031050 GO:0031053 GO:0031123 GO:0031124 GO:0031323 GO:0031325 GO:0031503 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033120 GO:0034470 GO:0034613 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040007 GO:0040029 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045087 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048522 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0070727 GO:0070887 GO:0070918 GO:0071013 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071695 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0098542 GO:0099402 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902494 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

256

Amino Acids

30.53

Weight (kDa)

11.43

Isoelectric Point (pI)

116.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 59 - 129 7.3e-19 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 431
Acc65I GGTACC 1 cut(s) 9
AccB1I GGYRCC 1 cut(s) 9
AccBSI CCGCTC 2 cut(s) 138, 156
AccII CGCG 2 cut(s) 117, 540
AciI CCGC 8 cut(s) 19, 25, 74, 121, 136, 151, 154, 640
AclWI GGATC 4 cut(s) 217, 230, 573, 678
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 357
AcvI CACGTG 1 cut(s) 80
AfaI GTAC 2 cut(s) 11, 314
AfeI AGCGCT 1 cut(s) 236
AfiI CCNNNNNNNGG 4 cut(s) 12, 57, 80, 160
AhdI GACNNNNNGTC 1 cut(s) 205
AjiI CACGTC 1 cut(s) 377
AjnI CCWGG 1 cut(s) 5
AluBI AGCT 4 cut(s) 42, 335, 459, 560
AluI AGCT 4 cut(s) 42, 335, 459, 560
Alw26I GTCTC 3 cut(s) 141, 492, 624
AlwI GGATC 4 cut(s) 217, 230, 573, 678
AlwNI CAGNNNCTG 1 cut(s) 673
Ama87I CYCGRG 1 cut(s) 282
Aor51HI AGCGCT 1 cut(s) 236
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 21, 27, 332
Asp718I GGTACC 1 cut(s) 9
AspA2I CCTAGG 1 cut(s) 482
AspLEI GCGC 3 cut(s) 237, 432, 540
AspS9I GGNCC 3 cut(s) 242, 550, 642
AsuC2I CCSGG 2 cut(s) 283, 284
AsuHPI GGTGA 3 cut(s) 150, 519, 606
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 3 cut(s) 242, 550, 642
AvrII CCTAGG 1 cut(s) 482
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 222
BanI GGYRCC 1 cut(s) 9
BauI CACGAG 1 cut(s) 441
BbrPI CACGTG 1 cut(s) 80
BbvCI CCTCAGC 1 cut(s) 399
BbvI GCAGC 3 cut(s) 33, 39, 344
BceAI ACGGC 1 cut(s) 512
BciT130I CCWGG 1 cut(s) 7
BcnI CCSGG 2 cut(s) 283, 284
BcoDI GTCTC 3 cut(s) 141, 492, 624
BfaI CTAG 6 cut(s) 204, 462, 483, 561, 591, 699
BfmI CTRYAG 2 cut(s) 43, 634
BfoI RGCGCY 1 cut(s) 238
BisI GCNGC 7 cut(s) 19, 22, 25, 28, 136, 154, 333
BlnI CCTAGG 1 cut(s) 482
BlsI GCNGC 7 cut(s) 20, 23, 26, 29, 137, 155, 334
Bme1390I CCNGG 3 cut(s) 7, 283, 284
Bme18I GGWCC 3 cut(s) 242, 550, 642
BmeRI GACNNNNNGTC 1 cut(s) 205
BmeT110I CYCGRG 1 cut(s) 282
BmgBI CACGTC 1 cut(s) 377
BmgT120I GGNCC 3 cut(s) 242, 550, 642
BmiI GGNNCC 7 cut(s) 11, 17, 165, 224, 288, 551, 644
BmrFI CCNGG 3 cut(s) 7, 283, 284
BmrI ACTGGG 1 cut(s) 511
BmuI ACTGGG 1 cut(s) 511
Bpu10I CCTNAGC 2 cut(s) 32, 399
BpuEI CTTGAG 1 cut(s) 529
BpuMI CCSGG 2 cut(s) 283, 284
BsaAI YACGTR 1 cut(s) 80
BsaBI GATNNNNATC 2 cut(s) 258, 570
BsaI GGTCTC 2 cut(s) 141, 492
BsaJI CCNNGG 6 cut(s) 282, 290, 482, 553, 653, 716
BsaWI WCCGGW 1 cut(s) 12
Bsc4I CCNNNNNNNGG 4 cut(s) 12, 57, 80, 160
Bse118I RCCGGY 2 cut(s) 57, 160
Bse1I ACTGG 2 cut(s) 245, 517
Bse8I GATNNNNATC 2 cut(s) 258, 570
BseBI CCWGG 1 cut(s) 7
BseDI CCNNGG 6 cut(s) 282, 290, 482, 553, 653, 716
BseGI GGATG 1 cut(s) 259
BseJI GATNNNNATC 2 cut(s) 258, 570
BseLI CCNNNNNNNGG 4 cut(s) 12, 57, 80, 160
BseMII CTCAG 2 cut(s) 23, 390
BseNI ACTGG 2 cut(s) 245, 517
BseRI GAGGAG 1 cut(s) 416
BseXI GCAGC 3 cut(s) 33, 39, 344
BsgI GTGCAG 1 cut(s) 605
Bsh1236I CGCG 2 cut(s) 117, 540
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 9
BsiEI CGRYCG 1 cut(s) 121
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 4 cut(s) 13, 58, 161, 283
BslFI GGGAC 2 cut(s) 563, 628
BslI CCNNNNNNNGG 4 cut(s) 12, 57, 80, 160
BsmAI GTCTC 3 cut(s) 141, 492, 624
BsmFI GGGAC 2 cut(s) 563, 628
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 2 cut(s) 141, 492
BsoBI CYCGRG 1 cut(s) 282
Bsp143I GATC 6 cut(s) 214, 222, 565, 593, 605, 670
Bsp19I CCATGG 1 cut(s) 553
Bsp68I TCGCGA 1 cut(s) 117
BspACI CCGC 8 cut(s) 19, 25, 74, 121, 136, 151, 154, 640
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 2 cut(s) 24, 391
BspFNI CGCG 2 cut(s) 117, 540
BspLI GGNNCC 7 cut(s) 11, 17, 165, 224, 288, 551, 644
BspPI GGATC 4 cut(s) 217, 230, 573, 678
BspT107I GGYRCC 1 cut(s) 9
BspTNI GGTCTC 2 cut(s) 141, 492
BsrBI CCGCTC 2 cut(s) 138, 156
BsrFI RCCGGY 2 cut(s) 57, 160
BsrI ACTGG 2 cut(s) 245, 517
BssAI RCCGGY 2 cut(s) 57, 160
BssECI CCNNGG 6 cut(s) 282, 290, 482, 553, 653, 716
BssMI GATC 6 cut(s) 214, 222, 565, 593, 605, 670
BssSI CACGAG 1 cut(s) 441
BssT1I CCWWGG 4 cut(s) 482, 553, 653, 716
Bst2BI CACGAG 1 cut(s) 441
Bst2UI CCWGG 1 cut(s) 7
Bst4CI ACNGT 6 cut(s) 128, 317, 665, 734, 753, 761
BstBAI YACGTR 1 cut(s) 80
BstC8I GCNNGC 3 cut(s) 59, 89, 176
BstDEI CTNAG 5 cut(s) 32, 218, 267, 399, 533
BstDSI CCRYGG 2 cut(s) 290, 553
BstF5I GGATG 1 cut(s) 259
BstFNI CGCG 2 cut(s) 117, 540
BstH2I RGCGCY 1 cut(s) 238
BstHHI GCGC 3 cut(s) 237, 432, 540
BstKTI GATC 6 cut(s) 217, 225, 568, 596, 608, 673
BstMAI GTCTC 3 cut(s) 141, 492, 624
BstMBI GATC 6 cut(s) 214, 222, 565, 593, 605, 670
BstMCI CGRYCG 1 cut(s) 121
BstMWI GCNNNNNNNGC 7 cut(s) 24, 27, 33, 54, 63, 329, 338
BstNI CCWGG 1 cut(s) 7
BstSCI CCNGG 3 cut(s) 5, 281, 282
BstSFI CTRYAG 2 cut(s) 43, 634
BstUI CGCG 2 cut(s) 117, 540
BstV1I GCAGC 3 cut(s) 33, 39, 344
BstX2I RGATCY 2 cut(s) 222, 670
BstYI RGATCY 2 cut(s) 222, 670
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 2 cut(s) 290, 553
BtrI CACGTC 1 cut(s) 377
BtsCI GGATG 1 cut(s) 259
BtsIMutI CAGTG 1 cut(s) 252
BtuMI TCGCGA 1 cut(s) 117
Cac8I GCNNGC 3 cut(s) 59, 89, 176
CaiI CAGNNNCTG 1 cut(s) 673
CfoI GCGC 3 cut(s) 237, 432, 540
Cfr10I RCCGGY 2 cut(s) 57, 160
Cfr13I GGNCC 3 cut(s) 242, 550, 642
Cfr9I CCCGGG 1 cut(s) 282
CseI GACGC 3 cut(s) 93, 209, 338
Csp6I GTAC 2 cut(s) 10, 313
CviAII CATG 1 cut(s) 554
CviQI GTAC 2 cut(s) 10, 313
DdeI CTNAG 5 cut(s) 32, 218, 267, 399, 533
DpnI GATC 6 cut(s) 216, 224, 567, 595, 607, 672
DpnII GATC 6 cut(s) 214, 222, 565, 593, 605, 670
DriI GACNNNNNGTC 1 cut(s) 205
EaeI YGGCCR 1 cut(s) 3
Eam1105I GACNNNNNGTC 1 cut(s) 205
EciI GGCGGA 1 cut(s) 63
Eco130I CCWWGG 4 cut(s) 482, 553, 653, 716
Eco31I GGTCTC 2 cut(s) 141, 492
Eco47I GGWCC 3 cut(s) 242, 550, 642
Eco47III AGCGCT 1 cut(s) 236
Eco57I CTGAAG 1 cut(s) 357
Eco72I CACGTG 1 cut(s) 80
Eco88I CYCGRG 1 cut(s) 282
EcoRII CCWGG 1 cut(s) 5
EcoT14I CCWWGG 4 cut(s) 482, 553, 653, 716
ErhI CCWWGG 4 cut(s) 482, 553, 653, 716
FaeI CATG 1 cut(s) 557
FaiI YATR 6 cut(s) 321, 360, 555, 693, 740, 757
FaqI GGGAC 2 cut(s) 563, 628
FatI CATG 1 cut(s) 553
Fnu4HI GCNGC 7 cut(s) 19, 22, 25, 28, 136, 154, 333
FokI GGATG 1 cut(s) 266
Fsp4HI GCNGC 7 cut(s) 19, 22, 25, 28, 136, 154, 333
FspAI RTGCGCAY 1 cut(s) 431
FspBI CTAG 6 cut(s) 204, 462, 483, 561, 591, 699
FspI TGCGCA 1 cut(s) 431
GlaI GCGC 3 cut(s) 236, 431, 539
GluI GCNGC 7 cut(s) 19, 22, 25, 28, 136, 154, 333
HaeII RGCGCY 1 cut(s) 238
HaeIII GGCC 1 cut(s) 5
HapII CCGG 4 cut(s) 13, 58, 161, 283
HgaI GACGC 3 cut(s) 93, 209, 338
HhaI GCGC 3 cut(s) 237, 432, 540
Hin1II CATG 1 cut(s) 557
Hin6I GCGC 3 cut(s) 235, 430, 538
HinP1I GCGC 3 cut(s) 235, 430, 538
HinfI GANTC 3 cut(s) 542, 687, 712
HpaII CCGG 4 cut(s) 13, 58, 161, 283
HphI GGTGA 3 cut(s) 150, 519, 606
Hpy166II GTNNAC 2 cut(s) 83, 374
Hpy188I TCNGA 1 cut(s) 211
Hpy188III TCNNGA 6 cut(s) 116, 197, 462, 591, 603, 668
Hpy8I GTNNAC 2 cut(s) 83, 374
Hpy99I CGWCG 4 cut(s) 101, 104, 107, 110
HpyAV CCTTC 3 cut(s) 244, 621, 696
HpyCH4III ACNGT 6 cut(s) 128, 317, 665, 734, 753, 761
HpyCH4IV ACGT 2 cut(s) 79, 376
HpyCH4V TGCA 3 cut(s) 323, 586, 695
HpyF10VI GCNNNNNNNGC 7 cut(s) 24, 27, 33, 54, 63, 329, 338
HpyF3I CTNAG 5 cut(s) 32, 218, 267, 399, 533
HpySE526I ACGT 2 cut(s) 79, 376
Hsp92II CATG 1 cut(s) 557
HspAI GCGC 3 cut(s) 235, 430, 538
KpnI GGTACC 1 cut(s) 13
KroI GCCGGC 1 cut(s) 57
KroNI GCCGGC 1 cut(s) 59
Kzo9I GATC 6 cut(s) 214, 222, 565, 593, 605, 670
LmnI GCTCC 4 cut(s) 15, 169, 286, 557
Lsp1109I GCAGC 3 cut(s) 33, 39, 344
MaeI CTAG 6 cut(s) 204, 462, 483, 561, 591, 699
MaeII ACGT 2 cut(s) 79, 376
MaeIII GTNAC 2 cut(s) 128, 741
MalI GATC 6 cut(s) 216, 224, 567, 595, 607, 672
MbiI CCGCTC 2 cut(s) 138, 156
MboI GATC 6 cut(s) 214, 222, 565, 593, 605, 670
MboII GAAGA 5 cut(s) 182, 254, 477, 480, 483
MflI RGATCY 2 cut(s) 222, 670
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 271, 597
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 536, 696, 721
MnlI CCTC 7 cut(s) 63, 123, 204, 319, 394, 446, 540
Mox20I TGGCCA 1 cut(s) 5
MreI CGCCGGCG 1 cut(s) 57
MroNI GCCGGC 1 cut(s) 57
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 707
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 335
MspI CCGG 4 cut(s) 13, 58, 161, 283
MspR9I CCNGG 3 cut(s) 7, 283, 284
MvaI CCWGG 1 cut(s) 7
MvnI CGCG 2 cut(s) 117, 540
MwoI GCNNNNNNNGC 7 cut(s) 24, 27, 33, 54, 63, 329, 338
NaeI GCCGGC 1 cut(s) 59
NciI CCSGG 2 cut(s) 283, 284
NcoI CCATGG 1 cut(s) 553
NdeII GATC 6 cut(s) 214, 222, 565, 593, 605, 670
NgoMIV GCCGGC 1 cut(s) 57
NlaIII CATG 1 cut(s) 557
NlaIV GGNNCC 7 cut(s) 11, 17, 165, 224, 288, 551, 644
NmuCI GTSAC 2 cut(s) 128, 741
NruI TCGCGA 1 cut(s) 117
NsbI TGCGCA 1 cut(s) 431
PcsI WCGNNNNNNNCGW 4 cut(s) 102, 105, 114, 502
PdiI GCCGGC 1 cut(s) 59
PkrI GCNGC 7 cut(s) 20, 23, 26, 29, 137, 155, 334
PleI GAGTC 3 cut(s) 536, 695, 720
PmaCI CACGTG 1 cut(s) 80
PmlI CACGTG 1 cut(s) 80
PpsI GAGTC 3 cut(s) 536, 695, 720
Ppu21I YACGTR 1 cut(s) 80
Psp6I CCWGG 1 cut(s) 5
PspCI CACGTG 1 cut(s) 80
PspGI CCWGG 1 cut(s) 5
PspN4I GGNNCC 7 cut(s) 11, 17, 165, 224, 288, 551, 644
PspPI GGNCC 3 cut(s) 242, 550, 642
PstNI CAGNNNCTG 1 cut(s) 673
PsuI RGATCY 2 cut(s) 222, 670
PvuII CAGCTG 1 cut(s) 335
RruI TCGCGA 1 cut(s) 117
RsaI GTAC 2 cut(s) 11, 314
RsaNI GTAC 2 cut(s) 10, 313
SaqAI TTAA 1 cut(s) 707
SatI GCNGC 7 cut(s) 19, 22, 25, 28, 136, 154, 333
Sau3AI GATC 6 cut(s) 214, 222, 565, 593, 605, 670
Sau96I GGNCC 3 cut(s) 242, 550, 642
SchI GAGTC 3 cut(s) 536, 696, 721
ScrFI CCNGG 3 cut(s) 7, 283, 284
SfcI CTRYAG 2 cut(s) 43, 634
SgrAI CRCCGGYG 1 cut(s) 57
SinI GGWCC 3 cut(s) 242, 550, 642
SmaI CCCGGG 1 cut(s) 284
SmlI CTYRAG 1 cut(s) 544
SmoI CTYRAG 1 cut(s) 544
Sse9I AATT 2 cut(s) 271, 597
SsiI CCGC 8 cut(s) 19, 25, 74, 121, 136, 151, 154, 640
SspMI CTAG 6 cut(s) 204, 462, 483, 561, 591, 699
StyD4I CCNGG 3 cut(s) 5, 281, 282
StyI CCWWGG 4 cut(s) 482, 553, 653, 716
TaaI ACNGT 6 cut(s) 128, 317, 665, 734, 753, 761
TaiI ACGT 2 cut(s) 82, 379
TasI AATT 2 cut(s) 271, 597
TauI GCSGC 4 cut(s) 21, 27, 138, 156
Tru1I TTAA 1 cut(s) 707
Tru9I TTAA 1 cut(s) 707
TscAI CASTG 1 cut(s) 252
TseFI GTSAC 2 cut(s) 128, 741
TseI GCWGC 3 cut(s) 21, 27, 332
Tsp45I GTSAC 2 cut(s) 128, 741
TspDTI ATGAA 2 cut(s) 368, 639
TspGWI ACGGA 1 cut(s) 156
TspMI CCCGGG 1 cut(s) 282
TspRI CASTG 1 cut(s) 252
VpaK11BI GGWCC 3 cut(s) 242, 550, 642
XbaI TCTAGA 2 cut(s) 461, 590
XcmI CCANNNNNNNNNTGG 1 cut(s) 365
XmaI CCCGGG 1 cut(s) 282
XmaJI CCTAGG 1 cut(s) 482
XspI CTAG 6 cut(s) 204, 462, 483, 561, 591, 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.