Prupe.1G240400_v2.0.a1

Oxysterol-binding protein-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0011201
Physical Location & Seq
Forward (+)
25442927 .. 25448229
5303 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G240400.1

Sequence Viewer

Length: 2460 bp
ATGAACCCGCTGTGCTGCATTGCGCCGGTGTCGATCGATCGGGACCGGGCCAGTCCGGTCGCGGCGAAGCAGTCAAGTCAGTGCCAGTTGGGGCCCGAGGCTCCGATCCGAAACGTGAGTTACGGCTCGAAGCCGAGCTACTCGGCTCAGGTCTCGTCGGCCGGGACCGAATCGGATAGGGCTTCCGTTACTGCGGGACACGAGGTTGAAGATACGATCAGCGAAGCTAGGGATTCGAAGGTGTTTGGTATCAATGGAGGCGTCAGTGGCAACGTGGCTGGGATTTTGTACAAGTGGGTGAACTACGGGAAGGGATGGAGGTCGAGGTGGTTTGTGCTCGAAGACGGTGTGCTTTCGTACTACAAGGTTCACGGACCGGACAAGATTTTGATGAGCCCGGTCCGGGAGAAAGGCTTGAGGGTGATCGGAGAAGACTCGTTGAGGTATATGAAGAAGGCTAATTGGAGTAATAGTCGGCTTGGCGCGCCGGCGAGGCCGTGCAAGCCTTTCGGCGTAGTCCATTTGAAGGTCTCTTCAATTCGTGCCAGCAAGTCAGATGATAAAAGGCTTTCCATATTCACAGGAACTAAAACTCTTCACTTGCGTTGTGTATCTAGAGAGGGCAGAGCTGCATGGATTGAGGCACTGCTGGGTGCTAAAGATCTTTTCCCTAGAGTTTTGACAAGCCATGATTTAGTACCTTCAGAAGATATAGTTGTTTCAACAGAGAAGCTAAGATTAAGATTAGCACAGGAGGGTGTTGGTGAGCCGGTGATCAAAGACTGCGAGTCAATTATGCTCTTAGAAGTCTCCGAGCTGCAAAATCAGTTGAAGACTCTTCAGAGTAAACATGTGATGTTGTTAGACACTTTGAGACAATTGGAGACGGAGAAAATAGAGCTGGAAACTACAGTAGTAGATGAAACAAAGGAGCGTGAGTCCTACTGCGGACAGGGGAATAGGAGATTTAGTGATTTCTACTCCGTCTTATCAGAGGGAAGTGCAAGTGACTCTGACGCAGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACAGATGAAGATGAAGGAACATATTTTGATACGCATGATATGTTGTCTTCAGATGCTTTAAGGAGTGCTTCCTATCGGAGTAGGGAAGATACTCTAAGAAGTGCTTCCCATCGGAGTAGGGAAGGTTTGGGCAATGGTTGTTTATATGATAGAGATTCCTTCTTTTCTGATCGATTGCATGGAGTTGAGGAGATGCGGACAGTTAAATATCCATATGTGAAAAGGAGGGATAATTTTCCAGAACCAAAGGAGAAAGAGAAACCTGTTGGCTTGTGGTCAATTATCAAGGATAATATTGGGAAGGACTTGTCTGGAGTCTGTCTTCCTGTTTATTTTAATGAACCCCTCTCTTCGTTACAAAAGTGCTTCGAAGATCTGGAGTATTCGAACTTGGTTGATCGAGCATTGGAATGGGGAAAGCAGGGGAATGATTTAATGAGAATTCTAAACGTTGCAGCTTTTGCTGTTTCTGGCTATGCATCAACAGAAGGTCGGCAGTGCAAACCCTTTAATCCTCTTCTTGGGGAGACCTATGAAGCTGACTATCCAGATAAAGGACTTCGTTTTTTCTCTGAAAAGGTGAGTCACCACCCAATGGTTGTTGCTTGTCACTGTGAAGGCAGAGGTTGGAAATTCTGGGCAGACTCCAATCTCAAGGGCAAGTTTTGGGGGCGTTCTATTCAGCTTGATCCTGTGGGTGTCCTTTCCTTGCAGTTTGAGGACGGGGAGACTTTTCAGTGGAGCAAGGTCACTACTTCTATATACAATATCATACTAGGAAAAATTTATTGTGACCACTATGGCACCATGCGCATCAGTGGAAGTGGCAATTACTCCTGCAAGCTAAAGTTCAAGGAGCAGTCTATCATAGACCGAAATCCACATCAGGTTCATGGATTTGTTCAAGACAACAGAACTGGAGAGAAAGTAGCAATGTTGGTGGGCAAGTGGGACGAGGCAATGTACTATGTGCTGGGAGATCCAACTACAAAACAAAAGGGTTATGATCCAATGACAGAGGCCGTGCTGCTGTGGGAAAGAGATAACTATGCAACCAAGACAAGATACAATCTCTCTCCTTTTGCAATATCTCTGAATGAATTAACACCTGGCTTATTGGAGAAATTACCTCCAACAGACTCAAGGCTAAGGCCAGATCAAAGACATTTGGAGAACGGTGAATATGAATTGGCAAATGCAGAGAAACTAAGACTAGAACAGCTACAAAGACAGGCGAGGAAGTTGCAAGAGAGAGGTTGGCAGCCAAGATGGTTTCGAAAAGACGAGGATGGTTGTTATAGTTATGCAGGTGGGTATTGGGAAACTAGGGAGAAGAAGAATTGGGAAGGAATTCCTGATATTTTTGGCCAGACTAGTGATTTGCCCTCATGTTCTGGGGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oxysterol_BP PH_11

Protein Analysis

820

Amino Acids

92.57

Weight (kDa)

5.88

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13170 AT1G13170
fragaria_vesca FvH4_4g25220 FvH4_4g25220
malus_domestica MD13G1105800.v1.1 MD16G1106000.v1.1
prunus_persica Prupe.1G240400_v2.0.a1
pyrus_communis pycom13g09180 pycom16g09010
rosa_chinensis RchiOBHm_Chr4g0432411
rosa_laevigata RLG00000003003 RLG00000006845
rosa_multiflora Rmu_sc0001084.1_g000022
rosa_roxburghii Rroxscaffold_5G00373880
rosa_rugosa Rorug04G0258300 Rorug04G0258400
rosa_samantha Rh4BG321800 Rh4DG317500
rosa_wichuraiana Rw4G027300 Rw7G029610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2351
Acc16I TGCGCA 1 cut(s) 1865
Acc36I ACCTGC 1 cut(s) 2351
AccB1I GGYRCC 1 cut(s) 1856
AccB7I CCANNNNNTGG 1 cut(s) 1648
AccII CGCG 2 cut(s) 62, 485
AciI CCGC 5 cut(s) 8, 62, 194, 948, 1249
AclI AACGTT 1 cut(s) 1503
AclWI GGATC 4 cut(s) 100, 1736, 2027, 2054
AcoI YGGCCR 2 cut(s) 159, 2419
AcsI RAATTY 4 cut(s) 1494, 1685, 1836, 2403
AcuI CTGAAG 3 cut(s) 687, 824, 1086
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 4 cut(s) 290, 359, 699, 2018
AfiI CCNNNNNNNGG 5 cut(s) 403, 526, 1574, 1607, 1648
AflIII ACRYGT 1 cut(s) 850
AgsI TTSAA 8 cut(s) 209, 526, 537, 723, 832, 1052, 1906, 1958
AhdI GACNNNNNGTC 1 cut(s) 787
AhlI ACTAGT 1 cut(s) 2426
AjnI CCWGG 1 cut(s) 2161
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 7 cut(s) 157, 535, 814, 868, 878, 1574, 1775
AlwI GGATC 4 cut(s) 100, 1736, 2027, 2054
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 7 cut(s) 48, 92, 159, 494, 2073, 2204, 2419
ApaI GGGCCC 1 cut(s) 96
ApeKI GCWGC 6 cut(s) 15, 629, 817, 1508, 2080, 2314
ApoI RAATTY 4 cut(s) 1494, 1685, 1836, 2403
ArsI GACNNNNNNTTYG 2 cut(s) 2416, 2448
AscI GGCGCGCC 1 cut(s) 483
Asp700I GAANNNNTTC 2 cut(s) 1156, 2403
AspLEI GCGC 4 cut(s) 25, 485, 487, 1866
AspS9I GGNCC 7 cut(s) 43, 48, 92, 93, 165, 374, 400
AsuC2I CCSGG 4 cut(s) 47, 163, 398, 404
AsuHPI GGTGA 7 cut(s) 310, 433, 776, 784, 1631, 1645, 2243
AsuII TTCGAA 4 cut(s) 236, 1422, 1439, 2329
AvaI CYCGRG 1 cut(s) 95
AvaII GGWCC 4 cut(s) 43, 165, 374, 400
BaeGI GKGCMC 1 cut(s) 96
BalI TGGCCA 1 cut(s) 2421
BanI GGYRCC 1 cut(s) 1856
BanII GRGCYC 2 cut(s) 96, 398
BarI GAAGNNNNNNTAC 2 cut(s) 122, 154
BauI CACGAG 1 cut(s) 200
BbsI GAAGAC 5 cut(s) 348, 438, 839, 1092, 1367
Bbv12I GWGCWC 1 cut(s) 339
BbvI GCAGC 6 cut(s) 2, 616, 804, 1520, 2067, 2326
BccI CCATC 5 cut(s) 309, 1031, 1170, 2316, 2336
BceAI ACGGC 3 cut(s) 139, 481, 2060
BcgI CGANNNNNNTGC 4 cut(s) 490, 524, 2278, 2312
BciT130I CCWGG 1 cut(s) 2163
BclI TGATCA 1 cut(s) 774
BcnI CCSGG 4 cut(s) 47, 163, 398, 404
BcoDI GTCTC 7 cut(s) 157, 535, 814, 868, 878, 1574, 1775
BcuI ACTAGT 1 cut(s) 2426
BfaI CTAG 7 cut(s) 228, 615, 672, 1829, 2267, 2379, 2427
BfmI CTRYAG 1 cut(s) 909
BfuAI ACCTGC 1 cut(s) 2351
BglI GCCNNNNNGGC 1 cut(s) 493
BglII AGATCT 2 cut(s) 661, 1426
BisI GCNGC 7 cut(s) 16, 63, 630, 818, 1509, 2081, 2315
BlsI GCNGC 7 cut(s) 17, 64, 631, 819, 1510, 2082, 2316
Bme1390I CCNGG 5 cut(s) 47, 163, 398, 404, 2163
Bme18I GGWCC 4 cut(s) 43, 165, 374, 400
BmeRI GACNNNNNGTC 1 cut(s) 787
BmeT110I CYCGRG 1 cut(s) 95
BmgT120I GGNCC 7 cut(s) 43, 48, 92, 93, 165, 374, 400
BmiI GGNNCC 6 cut(s) 44, 93, 94, 102, 166, 1858
BmrFI CCNGG 5 cut(s) 47, 163, 398, 404, 2163
BmsI GCATC 4 cut(s) 1096, 1236, 1541, 1875
BpiI GAAGAC 5 cut(s) 348, 438, 839, 1092, 1367
BpmI CTGGAG 3 cut(s) 1386, 1451, 1992
Bpu10I CCTNAGC 2 cut(s) 147, 2201
Bpu14I TTCGAA 4 cut(s) 236, 1422, 1439, 2329
BpuEI CTTGAG 3 cut(s) 436, 1691, 2179
BpuMI CCSGG 4 cut(s) 47, 163, 398, 404
Bsa29I ATCGAT 2 cut(s) 36, 1225
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 3 cut(s) 157, 535, 1574
BsaJI CCNNGG 1 cut(s) 96
BsaWI WCCGGW 2 cut(s) 55, 376
Bsc4I CCNNNNNNNGG 5 cut(s) 403, 526, 1574, 1607, 1648
Bse118I RCCGGY 3 cut(s) 25, 487, 769
Bse1I ACTGG 3 cut(s) 51, 85, 1975
Bse3DI GCAATG 4 cut(s) 18, 1192, 1992, 2019
BseBI CCWGG 1 cut(s) 2163
BseCI ATCGAT 2 cut(s) 36, 1225
BseDI CCNNGG 1 cut(s) 96
BseGI GGATG 2 cut(s) 320, 2347
BseLI CCNNNNNNNGG 5 cut(s) 403, 526, 1574, 1607, 1648
BseMI GCAATG 4 cut(s) 18, 1192, 1992, 2019
BseMII CTCAG 1 cut(s) 161
BseNI ACTGG 3 cut(s) 51, 85, 1975
BsePI GCGCGC 1 cut(s) 483
BseRI GAGGAG 1 cut(s) 1256
BseSI GKGCMC 1 cut(s) 96
BseX3I CGGCCG 1 cut(s) 159
BseXI GCAGC 6 cut(s) 2, 616, 804, 1520, 2067, 2326
BseYI CCCAGC 3 cut(s) 278, 649, 2026
Bsh1236I CGCG 2 cut(s) 62, 485
Bsh1285I CGRYCG 4 cut(s) 36, 40, 60, 162
BshFI GGCC 7 cut(s) 50, 94, 161, 496, 2075, 2206, 2421
BshNI GGYRCC 1 cut(s) 1856
BshVI ATCGAT 2 cut(s) 36, 1225
BsiEI CGRYCG 4 cut(s) 36, 40, 60, 162
BsiHKAI GWGCWC 1 cut(s) 339
BsiHKCI CYCGRG 1 cut(s) 95
BsiSI CCGG 9 cut(s) 26, 46, 56, 162, 377, 398, 403, 488, 770
BslFI GGGAC 4 cut(s) 56, 178, 210, 2018
BslI CCNNNNNNNGG 5 cut(s) 403, 526, 1574, 1607, 1648
BsmAI GTCTC 7 cut(s) 157, 535, 814, 868, 878, 1574, 1775
BsmBI CGTCTC 1 cut(s) 878
BsmFI GGGAC 4 cut(s) 56, 178, 210, 2018
BsnI GGCC 7 cut(s) 50, 94, 161, 496, 2075, 2206, 2421
Bso31I GGTCTC 3 cut(s) 157, 535, 1574
BsoBI CYCGRG 1 cut(s) 95
Bsp119I TTCGAA 4 cut(s) 236, 1422, 1439, 2329
Bsp120I GGGCCC 1 cut(s) 92
Bsp1286I GDGCHC 3 cut(s) 96, 339, 398
Bsp1407I TGTACA 1 cut(s) 288
BspACI CCGC 5 cut(s) 8, 62, 194, 948, 1249
BspANI GGCC 7 cut(s) 50, 94, 161, 496, 2075, 2206, 2421
BspCNI CTCAG 1 cut(s) 160
BspDI ATCGAT 2 cut(s) 36, 1225
BspFNI CGCG 2 cut(s) 62, 485
BspLI GGNNCC 6 cut(s) 44, 93, 94, 102, 166, 1858
BspMI ACCTGC 1 cut(s) 2351
BspPI GGATC 4 cut(s) 100, 1736, 2027, 2054
BspT104I TTCGAA 4 cut(s) 236, 1422, 1439, 2329
BspT107I GGYRCC 1 cut(s) 1856
BspTNI GGTCTC 3 cut(s) 157, 535, 1574
BsrDI GCAATG 4 cut(s) 18, 1192, 1992, 2019
BsrFI RCCGGY 3 cut(s) 25, 487, 769
BsrGI TGTACA 1 cut(s) 288
BsrI ACTGG 3 cut(s) 51, 85, 1975
BssAI RCCGGY 3 cut(s) 25, 487, 769
BssECI CCNNGG 1 cut(s) 96
BssHII GCGCGC 1 cut(s) 483
BssNI GRCGYC 1 cut(s) 261
BssSI CACGAG 1 cut(s) 200
Bst2BI CACGAG 1 cut(s) 200
Bst2UI CCWGG 1 cut(s) 2163
Bst4CI ACNGT 5 cut(s) 347, 913, 1255, 1667, 2231
Bst6I CTCTTC 6 cut(s) 538, 600, 843, 1408, 1575, 2448
BstACI GRCGYC 1 cut(s) 261
BstAPI GCANNNNNTGC 1 cut(s) 1514
BstAUI TGTACA 1 cut(s) 288
BstBI TTCGAA 4 cut(s) 236, 1422, 1439, 2329
BstC8I GCNNGC 5 cut(s) 485, 489, 503, 547, 1895
BstDEI CTNAG 6 cut(s) 147, 734, 802, 1148, 2201, 2261
BstF5I GGATG 2 cut(s) 320, 2347
BstFNI CGCG 2 cut(s) 62, 485
BstHHI GCGC 4 cut(s) 25, 485, 487, 1866
BstMAI GTCTC 7 cut(s) 157, 535, 814, 868, 878, 1574, 1775
BstMCI CGRYCG 4 cut(s) 36, 40, 60, 162
BstMWI GCNNNNNNNGC 6 cut(s) 267, 484, 493, 502, 1514, 1863
BstNI CCWGG 1 cut(s) 2163
BstNSI RCATGY 1 cut(s) 854
BstSCI CCNGG 5 cut(s) 45, 161, 396, 402, 2161
BstSFI CTRYAG 1 cut(s) 909
BstSLI GKGCMC 1 cut(s) 96
BstUI CGCG 2 cut(s) 62, 485
BstV1I GCAGC 6 cut(s) 2, 616, 804, 1520, 2067, 2326
BstV2I GAAGAC 5 cut(s) 348, 438, 839, 1092, 1367
BstX2I RGATCY 3 cut(s) 661, 1426, 2032
BstYI RGATCY 3 cut(s) 661, 1426, 2032
BstZI CGGCCG 1 cut(s) 159
Bsu15I ATCGAT 2 cut(s) 36, 1225
BsuRI GGCC 7 cut(s) 50, 94, 161, 496, 2075, 2206, 2421
BsuTUI ATCGAT 2 cut(s) 36, 1225
BtsCI GGATG 2 cut(s) 320, 2347
BtsI GCAGTG 2 cut(s) 644, 1556
BtsIMutI CAGTG 7 cut(s) 86, 271, 644, 1556, 1663, 1796, 1876
BveI ACCTGC 1 cut(s) 2351
Cac8I GCNNGC 5 cut(s) 485, 489, 503, 547, 1895
CfoI GCGC 4 cut(s) 25, 485, 487, 1866
Cfr10I RCCGGY 3 cut(s) 25, 487, 769
Cfr13I GGNCC 7 cut(s) 43, 48, 92, 93, 165, 374, 400
ClaI ATCGAT 2 cut(s) 36, 1225
CpoI CGGWCCG 2 cut(s) 374, 400
CseI GACGC 2 cut(s) 250, 1025
Csp6I GTAC 4 cut(s) 289, 358, 698, 2017
CspCI CAANNNNNGTGG 2 cut(s) 1974, 2009
CspI CGGWCCG 2 cut(s) 374, 400
CviAII CATG 8 cut(s) 633, 689, 851, 1088, 1232, 1861, 1946, 2442
CviQI GTAC 4 cut(s) 289, 358, 698, 2017
DdeI CTNAG 6 cut(s) 147, 734, 802, 1148, 2201, 2261
DriI GACNNNNNGTC 1 cut(s) 787
EaeI YGGCCR 2 cut(s) 159, 2419
EagI CGGCCG 1 cut(s) 159
Eam1104I CTCTTC 6 cut(s) 538, 600, 843, 1408, 1575, 2448
Eam1105I GACNNNNNGTC 1 cut(s) 787
EarI CTCTTC 6 cut(s) 538, 600, 843, 1408, 1575, 2448
EclXI CGGCCG 1 cut(s) 159
Eco24I GRGCYC 2 cut(s) 96, 398
Eco31I GGTCTC 3 cut(s) 157, 535, 1574
Eco47I GGWCC 4 cut(s) 43, 165, 374, 400
Eco52I CGGCCG 1 cut(s) 159
Eco57I CTGAAG 3 cut(s) 687, 824, 1086
Eco88I CYCGRG 1 cut(s) 95
EcoO109I RGGNCCY 1 cut(s) 92
EcoRI GAATTC 2 cut(s) 1494, 2403
EcoRII CCWGG 1 cut(s) 2161
EcoT22I ATGCAT 1 cut(s) 1534
EcoT38I GRGCYC 2 cut(s) 96, 398
Esp3I CGTCTC 1 cut(s) 878
FaeI CATG 8 cut(s) 636, 692, 854, 1091, 1235, 1864, 1949, 2445
FalI AAGNNNNNCTT 4 cut(s) 1105, 1137, 1141, 1173
FaqI GGGAC 4 cut(s) 56, 178, 210, 2018
FatI CATG 8 cut(s) 632, 688, 850, 1087, 1231, 1860, 1945, 2441
FauI CCCGC 2 cut(s) 15, 187
FauNDI CATATG 1 cut(s) 1267
FbaI TGATCA 1 cut(s) 774
Fnu4HI GCNGC 7 cut(s) 16, 63, 630, 818, 1509, 2081, 2315
FokI GGATG 2 cut(s) 327, 2354
FriOI GRGCYC 2 cut(s) 96, 398
Fsp4HI GCNGC 7 cut(s) 16, 63, 630, 818, 1509, 2081, 2315
FspAI RTGCGCAY 1 cut(s) 1865
FspBI CTAG 7 cut(s) 228, 615, 672, 1829, 2267, 2379, 2427
FspI TGCGCA 1 cut(s) 1865
GlaI GCGC 4 cut(s) 24, 484, 486, 1865
GluI GCNGC 7 cut(s) 16, 63, 630, 818, 1509, 2081, 2315
GsaI CCCAGC 3 cut(s) 282, 653, 2030
GsuI CTGGAG 3 cut(s) 1386, 1451, 1992
HaeIII GGCC 7 cut(s) 50, 94, 161, 496, 2075, 2206, 2421
HapII CCGG 9 cut(s) 26, 46, 56, 162, 377, 398, 403, 488, 770
HgaI GACGC 2 cut(s) 250, 1025
HhaI GCGC 4 cut(s) 25, 485, 487, 1866
Hin1I GRCGYC 1 cut(s) 261
Hin1II CATG 8 cut(s) 636, 692, 854, 1091, 1235, 1864, 1949, 2445
Hin6I GCGC 4 cut(s) 23, 483, 485, 1864
HinP1I GCGC 4 cut(s) 23, 483, 485, 1864
HpaII CCGG 9 cut(s) 26, 46, 56, 162, 377, 398, 403, 488, 770
HphI GGTGA 7 cut(s) 310, 433, 776, 784, 1631, 1645, 2243
Hpy166II GTNNAC 3 cut(s) 301, 370, 848
Hpy188III TCNNGA 9 cut(s) 41, 615, 1034, 1292, 1365, 1430, 1601, 1958, 2408
Hpy8I GTNNAC 3 cut(s) 301, 370, 848
Hpy99I CGWCG 1 cut(s) 160
HpyCH4III ACNGT 5 cut(s) 347, 913, 1255, 1667, 2231
HpyCH4IV ACGT 3 cut(s) 114, 273, 1503
HpyF10VI GCNNNNNNNGC 6 cut(s) 267, 484, 493, 502, 1514, 1863
HpyF3I CTNAG 6 cut(s) 147, 734, 802, 1148, 2201, 2261
HpySE526I ACGT 3 cut(s) 114, 273, 1503
Hsp92I GRCGYC 1 cut(s) 261
Hsp92II CATG 8 cut(s) 636, 692, 854, 1091, 1235, 1864, 1949, 2445
HspAI GCGC 4 cut(s) 23, 483, 485, 1864
KroI GCCGGC 1 cut(s) 487
KroNI GCCGGC 1 cut(s) 489
Ksp22I TGATCA 1 cut(s) 774
LmnI GCTCC 5 cut(s) 106, 931, 1040, 1794, 1909
Lsp1109I GCAGC 6 cut(s) 2, 616, 804, 1520, 2067, 2326
LweI GCATC 4 cut(s) 1096, 1236, 1541, 1875
MaeI CTAG 7 cut(s) 228, 615, 672, 1829, 2267, 2379, 2427
MaeII ACGT 3 cut(s) 114, 273, 1503
MaeIII GTNAC 8 cut(s) 119, 187, 1007, 1407, 1637, 1661, 1801, 1844
MfeI CAATTG 1 cut(s) 878
MflI RGATCY 3 cut(s) 661, 1426, 2032
MhlI GDGCHC 3 cut(s) 96, 339, 398
MlsI TGGCCA 1 cut(s) 2421
MluNI TGGCCA 1 cut(s) 2421
MlyI GAGTC 9 cut(s) 428, 797, 829, 947, 1004, 1377, 1645, 1691, 2186
MmeI TCCRAC 3 cut(s) 1661, 2060, 2210
Mox20I TGGCCA 1 cut(s) 2421
Mph1103I ATGCAT 1 cut(s) 1534
MreI CGCCGGCG 1 cut(s) 487
MroNI GCCGGC 1 cut(s) 487
MroXI GAANNNNTTC 2 cut(s) 1156, 2403
MscI TGGCCA 1 cut(s) 2421
MseI TTAA 7 cut(s) 740, 1112, 1257, 1389, 1487, 1563, 2156
MslI CAYNNNNRTG 1 cut(s) 1462
Msp20I TGGCCA 1 cut(s) 2421
MspA1I CMGCKG 1 cut(s) 10
MspI CCGG 9 cut(s) 26, 46, 56, 162, 377, 398, 403, 488, 770
MspR9I CCNGG 5 cut(s) 47, 163, 398, 404, 2163
MunI CAATTG 1 cut(s) 878
MvaI CCWGG 1 cut(s) 2163
MvnI CGCG 2 cut(s) 62, 485
MwoI GCNNNNNNNGC 6 cut(s) 267, 484, 493, 502, 1514, 1863
NaeI GCCGGC 1 cut(s) 489
NciI CCSGG 4 cut(s) 47, 163, 398, 404
NdeI CATATG 1 cut(s) 1267
NgoMIV GCCGGC 1 cut(s) 487
NlaIII CATG 8 cut(s) 636, 692, 854, 1091, 1235, 1864, 1949, 2445
NlaIV GGNNCC 6 cut(s) 44, 93, 94, 102, 166, 1858
NmeAIII GCCGAG 2 cut(s) 122, 159
NmuCI GTSAC 5 cut(s) 1007, 1637, 1661, 1801, 1844
NsbI TGCGCA 1 cut(s) 1865
NsiI ATGCAT 1 cut(s) 1534
NspI RCATGY 1 cut(s) 854
NspV TTCGAA 4 cut(s) 236, 1422, 1439, 2329
PalAI GGCGCGCC 1 cut(s) 483
PaqCI CACCTGC 1 cut(s) 2351
PauI GCGCGC 1 cut(s) 483
PciI ACATGT 1 cut(s) 850
PdiI GCCGGC 1 cut(s) 489
PdmI GAANNNNTTC 2 cut(s) 1156, 2403
PfeI GAWTC 3 cut(s) 170, 233, 1208
PflMI CCANNNNNTGG 1 cut(s) 1648
PfoI TCCNGGA 1 cut(s) 402
PkrI GCNGC 7 cut(s) 17, 64, 631, 819, 1510, 2082, 2316
Ple19I CGATCG 2 cut(s) 36, 40
PleI GAGTC 9 cut(s) 428, 796, 829, 946, 1004, 1376, 1644, 1691, 2186
PpsI GAGTC 9 cut(s) 428, 796, 829, 946, 1004, 1376, 1644, 1691, 2186
PscI ACATGT 1 cut(s) 850
Psp1406I AACGTT 1 cut(s) 1503
Psp6I CCWGG 1 cut(s) 2161
PspFI CCCAGC 3 cut(s) 278, 649, 2026
PspGI CCWGG 1 cut(s) 2161
PspN4I GGNNCC 6 cut(s) 44, 93, 94, 102, 166, 1858
PspOMI GGGCCC 1 cut(s) 92
PspPI GGNCC 7 cut(s) 43, 48, 92, 93, 165, 374, 400
PsuI RGATCY 3 cut(s) 661, 1426, 2032
PteI GCGCGC 1 cut(s) 483
PvuI CGATCG 2 cut(s) 36, 40
RsaI GTAC 4 cut(s) 290, 359, 699, 2018
RsaNI GTAC 4 cut(s) 289, 358, 698, 2017
RseI CAYNNNNRTG 1 cut(s) 1462
Rsr2I CGGWCCG 2 cut(s) 374, 400
RsrII CGGWCCG 2 cut(s) 374, 400
SaqAI TTAA 7 cut(s) 740, 1112, 1257, 1389, 1487, 1563, 2156
SatI GCNGC 7 cut(s) 16, 63, 630, 818, 1509, 2081, 2315
Sau96I GGNCC 7 cut(s) 43, 48, 92, 93, 165, 374, 400
SchI GAGTC 9 cut(s) 428, 797, 829, 947, 1004, 1377, 1645, 1691, 2186
ScrFI CCNGG 5 cut(s) 47, 163, 398, 404, 2163
SduI GDGCHC 3 cut(s) 96, 339, 398
SfaNI GCATC 4 cut(s) 1096, 1236, 1541, 1875
SfcI CTRYAG 1 cut(s) 909
SfuI TTCGAA 4 cut(s) 236, 1422, 1439, 2329
SgrAI CRCCGGYG 2 cut(s) 25, 487
SgsI GGCGCGCC 1 cut(s) 483
SinI GGWCC 4 cut(s) 43, 165, 374, 400
SmiMI CAYNNNNRTG 1 cut(s) 1462
SmlI CTYRAG 3 cut(s) 415, 1706, 2194
SmoI CTYRAG 3 cut(s) 415, 1706, 2194
SpeI ACTAGT 1 cut(s) 2426
SsiI CCGC 5 cut(s) 8, 62, 194, 948, 1249
SspI AATATT 1 cut(s) 1348
SspMI CTAG 7 cut(s) 228, 615, 672, 1829, 2267, 2379, 2427
StyD4I CCNGG 5 cut(s) 45, 161, 396, 402, 2161
TaaI ACNGT 5 cut(s) 347, 913, 1255, 1667, 2231
TaiI ACGT 3 cut(s) 117, 276, 1506
TaqII GACCGA 2 cut(s) 182, 1941
TatI WGTACW 2 cut(s) 288, 2016
TauI GCSGC 1 cut(s) 65
TfiI GAWTC 3 cut(s) 170, 233, 1208
Tru1I TTAA 7 cut(s) 740, 1112, 1257, 1389, 1487, 1563, 2156
Tru9I TTAA 7 cut(s) 740, 1112, 1257, 1389, 1487, 1563, 2156
TscAI CASTG 7 cut(s) 86, 271, 651, 1556, 1670, 1796, 1876
TseFI GTSAC 5 cut(s) 1007, 1637, 1661, 1801, 1844
TseI GCWGC 6 cut(s) 15, 629, 817, 1508, 2080, 2314
Tsp45I GTSAC 5 cut(s) 1007, 1637, 1661, 1801, 1844
TspGWI ACGGA 4 cut(s) 175, 387, 902, 973
TspRI CASTG 7 cut(s) 86, 271, 651, 1556, 1670, 1796, 1876
Van91I CCANNNNNTGG 1 cut(s) 1648
VpaK11BI GGWCC 4 cut(s) 43, 165, 374, 400
XapI RAATTY 4 cut(s) 1494, 1685, 1836, 2403
XbaI TCTAGA 1 cut(s) 614
XceI RCATGY 1 cut(s) 854
XmnI GAANNNNTTC 2 cut(s) 1156, 2403
XspI CTAG 7 cut(s) 228, 615, 672, 1829, 2267, 2379, 2427
Zsp2I ATGCAT 1 cut(s) 1534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.