pycom13g09180

Oxysterol-binding protein-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0011201
Physical Location & Seq
Reverse (-)
6145429 .. 6149518
4090 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g09180.1

Sequence Viewer

Length: 2460 bp
ATGAACCCGCTGTGCTGCATTGCGCCGGTTTCGATCGATCGGGACCGGGGCACCCCGGTGGCGGCGAAGCAGTCGGGTCAGTGCCAGGTAGGCTCGGAGGCTCCGATCCGGAACGTCAGCTACGGCTCGAAGCCGAGCTACTCGGCTCAGGTCTCGTCGGCCGGGACCGAATCGGACAGGGCTTCCGCCGCGGCGGGCCACGAGGTTGAGGATACGATCAGCGAAGCTCGGGATTCGAAGGTGTTTGGCGGCGGCGTGAGCGGCAGCTTGGCTGGGATTTTGTACAAGTGGGTGAACTACGGGAAGGGGTGGCGGTCGCGGTGGTTTATGCTCGAAGACGGCGTGTTTTCGTACTACAAGGTTCATGGACCGGACAAGATTTTGGTGAGCCAGGTGAGAGAGAAGGGATTGAGGGTGATCGGAGAGAACTCGCTGAGGTACATGAAGAAGGCGAATTGGGGCAGTAATCGGCTCGGAGGTCCGGCGAGGCCGTGGAAGCCTTTCGGAGAAGTGCATTTGAAGGTCTCTTCAATTCGTGCCAGCAAATCAGATGATAAACGGCTTTCCATATTCACAGGAACTAAAACTCTTCACTTGCGGTGTGTGACCAGAGAGGACCGAGCTACATGGATTGACGCACTGCTGGGTGCTAAAGATCTTTTCCCTAGAGTGTTTACGAGCAATGATTTGGTACCTTCGGAAGATATAGTTGTTTCGACAGAGAAGCTAAGGCTAAGATTAACACAGGAGGGAATTGGTGAGCCGGTGATCAAAGAATGCGAGTCAATTATGCTCTTAGAAGTGTCAGAGCTTCAAAATCAGTTGAAGGGTCTTCAGAGTAAACATGTGATGCTGTTGGAGTCATTGAGGCAATTAGAGACAGAAAAAATCGAGCTGGAAACTACAGTAGTGGATGAAACAAAGGAGCGTGAGTCATACGGACAGGGGGATAGGAGATTTAGTGATTTCTACTCCGTCTTATCTGAGGGCAGTGCAAGTGATTCTGATGCAGATAACGAAAGTCAAGATGGGGCAGATGTTGAAACAGATGAAGATGAAGGAACATATTTTGATACATATGACATTTTGTCTTCAGAAGCTCTAAGAAGTGCTTCCTATCGGAATAGAGAAGGCTTGGGAAATGATGCTCTAAGAAGTGCTTCCTACCGGAGCAGGGAAGGTTTGGGAAATGGTTGTATATTTGAAAGAGATTCTTTCTTTTCTGATCGATTGCGTGGACTTGAGGAGATCAAGACAATTAAATATCCATACGTGAAAAGGAGGGATGATTTGCCAGAACCCAAGGAGAAAGAGAAGCATATTGGCTTGTGGTCGATTATCAAGGATAATATTGGGAAGGACTTGTCTGGAGTTTGCCTTCCCGTTTATTTTAATGAACCACTCTCATCGTTGCAAAAGTGCTTTGAAGATCTGGAATATTCAAAGTTGGTTGATCGAGCATCGGAATGGGGAAAGCAGGGGAATGATTTAATGAGAATTCTAAACGTTGCAGCTTTTGCTGTATCTGGCTATGCATCAACAGAAGGTCGGCAGTGCAAACCCTTTAATCCTCTCCTCGGGGAGACCTATGAGGCTGACTATCCAGATAAAGGACTTCGTTTTTTCTCTGAAAAGGTGAGTCACCACCCAATGGTTGTTGCTTGTCATTGTGAAGGAAGAGGTTGGAAATTCTGGGCGGACTCCAATCTCAAGGGCAAGTTTTGGGGGCGTTCTATTCAGCTTGATCCTGTGGGTACCCTTTCCTTGCAGTTTGAGGATGGGGAGACATTTCAGTGGAGCAAGGTCACTACCTCTATATACAATATCATACTAGGAAAAATTTATTGTGACCACTATGGCACCATGCGCATCAGGGGCAGTGGCAATTATTCCTGCAAGCTAAAGTTCAAGGAGCAGTCTATCATAGACCGAAATCCACATCAGGTTCATGGATTTGTTCAAGACAATAGAACTGGAGAGAATGTAGCAATGTTGGTGGGTAAGTGGGACGAGGCAATGTACTATGTGCTGGGAGATCCAACTACAAAACCAAAGGGTTATGATCCAATGACAGAGGCTGTGCTTCTCTGGGAAAGAGATGACTATGTGACCAAGACAAGATACAATTTCTCCCCTTTTGCAATATCCCTTAATGAACTGACACCTGGCTTATTGGAGAAGTTACCGCCGACGGACTCAAGGCTAAGGCCAGATCAAAGACATTTGGAGAATGGTGAATATGAATTGGCAAATGCAGAGAAGCTAAGACTTGAACAGCTTCAAAGACAGGCAAGGAAGTTGCAAGAGAGAGGGTGGCAACCAAGATGGTTTCGGAAAGACGAGGAGGGTTGTTATAGTTATGTGGGAGGGTATTGGGAAACTAGGGAGAACAACTGGGATGGAATTCCTGATATTTTTGGCCAGAGTAGCGATTTGCCTTCGTGTTCTGGTGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oxysterol_BP PH_11

Protein Analysis

820

Amino Acids

92.72

Weight (kDa)

5.57

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH PF00169 91 - 215 4.7e-07 PH domain
PH_11 PF15413 94 - 215 7e-15 Pleckstrin homology domain
Oxysterol_BP PF01237 443 - 796 1.9e-126 Oxysterol-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13170 AT1G13170
fragaria_vesca FvH4_4g25220 FvH4_4g25220
malus_domestica MD13G1105800.v1.1 MD16G1106000.v1.1
prunus_persica Prupe.1G240400_v2.0.a1
pyrus_communis pycom13g09180 pycom16g09010
rosa_chinensis RchiOBHm_Chr4g0432411
rosa_laevigata RLG00000003003 RLG00000006845
rosa_multiflora Rmu_sc0001084.1_g000022
rosa_roxburghii Rroxscaffold_5G00373880
rosa_rugosa Rorug04G0258300 Rorug04G0258400
rosa_samantha Rh4BG321800 Rh4DG317500
rosa_wichuraiana Rw4G027300 Rw7G029610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1868
Acc65I GGTACC 2 cut(s) 691, 1754
AccB1I GGYRCC 4 cut(s) 50, 691, 1754, 1859
AccB7I CCANNNNNTGG 1 cut(s) 1651
AccBSI CCGCTC 1 cut(s) 261
AccII CGCG 2 cut(s) 191, 319
AccIII TCCGGA 1 cut(s) 108
AclI AACGTT 1 cut(s) 1506
AclWI GGATC 4 cut(s) 100, 1739, 2030, 2057
AcoI YGGCCR 2 cut(s) 159, 2419
AcsI RAATTY 4 cut(s) 1497, 1688, 1839, 2403
AcuI CTGAAG 2 cut(s) 818, 1077
AfaI GTAC 6 cut(s) 284, 353, 440, 693, 1756, 2021
AfiI CCNNNNNNNGG 5 cut(s) 61, 1174, 1577, 1610, 1651
AflIII ACRYGT 1 cut(s) 844
AhdI GACNNNNNGTC 1 cut(s) 1087
AjnI CCWGG 3 cut(s) 84, 390, 2164
AleI CACNNNNGTG 1 cut(s) 56
Alw26I GTCTC 5 cut(s) 157, 529, 872, 1577, 1778
AlwI GGATC 4 cut(s) 100, 1739, 2030, 2057
AlwNI CAGNNNCTG 1 cut(s) 2078
Ama87I CYCGRG 2 cut(s) 228, 1577
Aor13HI TCCGGA 1 cut(s) 108
AoxI GGCC 5 cut(s) 159, 196, 488, 2207, 2419
ApeKI GCWGC 3 cut(s) 15, 264, 1511
ApoI RAATTY 4 cut(s) 1497, 1688, 1839, 2403
Asp700I GAANNNNTTC 4 cut(s) 500, 1111, 1159, 2277
Asp718I GGTACC 2 cut(s) 691, 1754
AspLEI GCGC 2 cut(s) 25, 1869
AspS9I GGNCC 6 cut(s) 43, 165, 196, 368, 479, 616
AsuC2I CCSGG 3 cut(s) 47, 56, 163
AsuHPI GGTGA 9 cut(s) 304, 397, 406, 427, 770, 778, 1634, 1648, 2246
AsuII TTCGAA 1 cut(s) 236
AvaI CYCGRG 2 cut(s) 228, 1577
AvaII GGWCC 5 cut(s) 43, 165, 368, 479, 616
BaeGI GKGCMC 1 cut(s) 53
BalI TGGCCA 1 cut(s) 2421
BanI GGYRCC 4 cut(s) 50, 691, 1754, 1859
BarI GAAGNNNNNNTAC 2 cut(s) 122, 154
BauI CACGAG 1 cut(s) 200
BbsI GAAGAC 3 cut(s) 342, 824, 1083
BbvCI CCTCAGC 1 cut(s) 434
BbvI GCAGC 3 cut(s) 2, 276, 1523
BccI CCATC 4 cut(s) 1022, 1772, 2319, 2393
BceAI ACGGC 4 cut(s) 139, 355, 475, 575
BciT130I CCWGG 3 cut(s) 86, 392, 2166
BciVI GTATCC 1 cut(s) 205
BclI TGATCA 1 cut(s) 768
BcnI CCSGG 3 cut(s) 47, 56, 163
BcoDI GTCTC 5 cut(s) 157, 529, 872, 1577, 1778
BfaI CTAG 3 cut(s) 666, 1832, 2382
BfmI CTRYAG 1 cut(s) 903
BfuI GTATCC 1 cut(s) 205
BglI GCCNNNNNGGC 1 cut(s) 90
BglII AGATCT 2 cut(s) 655, 1429
BisI GCNGC 9 cut(s) 16, 63, 189, 192, 250, 253, 262, 265, 1512
BlsI GCNGC 9 cut(s) 17, 64, 190, 193, 251, 254, 263, 266, 1513
Bme1390I CCNGG 6 cut(s) 47, 56, 86, 163, 392, 2166
Bme18I GGWCC 5 cut(s) 43, 165, 368, 479, 616
BmeRI GACNNNNNGTC 1 cut(s) 1087
BmeT110I CYCGRG 2 cut(s) 228, 1577
BmgT120I GGNCC 6 cut(s) 43, 165, 196, 368, 479, 616
BmiI GGNNCC 7 cut(s) 44, 52, 102, 166, 693, 1756, 1861
BmrFI CCNGG 6 cut(s) 47, 56, 86, 163, 392, 2166
BmrI ACTGGG 1 cut(s) 2404
BmsI GCATC 6 cut(s) 840, 997, 1135, 1469, 1544, 1878
BmuI ACTGGG 1 cut(s) 2404
BpiI GAAGAC 3 cut(s) 342, 824, 1083
BpmI CTGGAG 2 cut(s) 1389, 1995
Bpu10I CCTNAGC 4 cut(s) 147, 434, 728, 2204
Bpu14I TTCGAA 1 cut(s) 236
BpuEI CTTGAG 3 cut(s) 1262, 1694, 2182
BpuMI CCSGG 3 cut(s) 47, 56, 163
Bsa29I ATCGAT 2 cut(s) 36, 1228
BsaAI YACGTR 1 cut(s) 1273
BsaI GGTCTC 3 cut(s) 157, 529, 1577
BsaJI CCNNGG 6 cut(s) 46, 54, 189, 491, 1302, 1576
BsaWI WCCGGW 3 cut(s) 108, 370, 1167
BsaXI ACNNNNNCTCC 8 cut(s) 917, 946, 947, 976, 1968, 1998, 2114, 2144
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 1174, 1577, 1610, 1651
Bse118I RCCGGY 2 cut(s) 25, 763
Bse1I ACTGG 2 cut(s) 1978, 2399
Bse3DI GCAATG 4 cut(s) 18, 688, 1995, 2022
BseAI TCCGGA 1 cut(s) 108
BseBI CCWGG 3 cut(s) 86, 392, 2166
BseCI ATCGAT 2 cut(s) 36, 1228
BseDI CCNNGG 6 cut(s) 46, 54, 189, 491, 1302, 1576
BseGI GGATG 4 cut(s) 919, 1291, 1783, 2404
BseLI CCNNNNNNNGG 5 cut(s) 61, 1174, 1577, 1610, 1651
BseMI GCAATG 4 cut(s) 18, 688, 1995, 2022
BseMII CTCAG 3 cut(s) 161, 425, 975
BseNI ACTGG 2 cut(s) 1978, 2399
BseRI GAGGAG 3 cut(s) 1259, 1565, 2357
BseSI GKGCMC 1 cut(s) 53
BseX3I CGGCCG 1 cut(s) 159
BseXI GCAGC 3 cut(s) 2, 276, 1523
BseYI CCCAGC 3 cut(s) 272, 643, 2029
Bsh1236I CGCG 2 cut(s) 191, 319
Bsh1285I CGRYCG 4 cut(s) 36, 40, 162, 317
BshFI GGCC 5 cut(s) 161, 198, 490, 2209, 2421
BshNI GGYRCC 4 cut(s) 50, 691, 1754, 1859
BshVI ATCGAT 2 cut(s) 36, 1228
BsiEI CGRYCG 4 cut(s) 36, 40, 162, 317
BsiHKCI CYCGRG 2 cut(s) 228, 1577
BsiSI CCGG 9 cut(s) 26, 46, 56, 109, 162, 371, 482, 764, 1168
BslFI GGGAC 3 cut(s) 56, 178, 2021
BslI CCNNNNNNNGG 5 cut(s) 61, 1174, 1577, 1610, 1651
BsmAI GTCTC 5 cut(s) 157, 529, 872, 1577, 1778
BsmFI GGGAC 3 cut(s) 56, 178, 2021
BsmI GAATGC 1 cut(s) 782
BsnI GGCC 5 cut(s) 161, 198, 490, 2209, 2421
Bso31I GGTCTC 3 cut(s) 157, 529, 1577
BsoBI CYCGRG 2 cut(s) 228, 1577
Bsp119I TTCGAA 1 cut(s) 236
Bsp1286I GDGCHC 1 cut(s) 53
Bsp13I TCCGGA 1 cut(s) 108
Bsp1407I TGTACA 1 cut(s) 282
BspANI GGCC 5 cut(s) 161, 198, 490, 2209, 2421
BspCNI CTCAG 3 cut(s) 160, 426, 976
BspDI ATCGAT 2 cut(s) 36, 1228
BspEI TCCGGA 1 cut(s) 108
BspFNI CGCG 2 cut(s) 191, 319
BspLI GGNNCC 7 cut(s) 44, 52, 102, 166, 693, 1756, 1861
BspPI GGATC 4 cut(s) 100, 1739, 2030, 2057
BspT104I TTCGAA 1 cut(s) 236
BspT107I GGYRCC 4 cut(s) 50, 691, 1754, 1859
BspTNI GGTCTC 3 cut(s) 157, 529, 1577
BsrBI CCGCTC 1 cut(s) 261
BsrDI GCAATG 4 cut(s) 18, 688, 1995, 2022
BsrFI RCCGGY 2 cut(s) 25, 763
BsrGI TGTACA 1 cut(s) 282
BsrI ACTGG 2 cut(s) 1978, 2399
BssAI RCCGGY 2 cut(s) 25, 763
BssECI CCNNGG 6 cut(s) 46, 54, 189, 491, 1302, 1576
BssSI CACGAG 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 1302
Bst2BI CACGAG 1 cut(s) 200
Bst2UI CCWGG 3 cut(s) 86, 392, 2166
Bst4CI ACNGT 1 cut(s) 907
Bst6I CTCTTC 4 cut(s) 532, 594, 1672, 2448
BstAPI GCANNNNNTGC 1 cut(s) 1517
BstAUI TGTACA 1 cut(s) 282
BstBAI YACGTR 1 cut(s) 1273
BstBI TTCGAA 1 cut(s) 236
BstC8I GCNNGC 3 cut(s) 196, 541, 1898
BstDSI CCRYGG 2 cut(s) 189, 491
BstF5I GGATG 4 cut(s) 919, 1291, 1783, 2404
BstFNI CGCG 2 cut(s) 191, 319
BstHHI GCGC 2 cut(s) 25, 1869
BstMAI GTCTC 5 cut(s) 157, 529, 872, 1577, 1778
BstMCI CGRYCG 4 cut(s) 36, 40, 162, 317
BstMWI GCNNNNNNNGC 9 cut(s) 90, 188, 258, 261, 496, 1517, 1866, 1875, 2427
BstNI CCWGG 3 cut(s) 86, 392, 2166
BstNSI RCATGY 1 cut(s) 848
BstSCI CCNGG 6 cut(s) 45, 54, 84, 161, 390, 2164
BstSFI CTRYAG 1 cut(s) 903
BstSLI GKGCMC 1 cut(s) 53
BstUI CGCG 2 cut(s) 191, 319
BstV1I GCAGC 3 cut(s) 2, 276, 1523
BstV2I GAAGAC 3 cut(s) 342, 824, 1083
BstX2I RGATCY 3 cut(s) 655, 1429, 2035
BstYI RGATCY 3 cut(s) 655, 1429, 2035
BstZI CGGCCG 1 cut(s) 159
Bsu15I ATCGAT 2 cut(s) 36, 1228
BsuI GTATCC 1 cut(s) 205
BsuRI GGCC 5 cut(s) 161, 198, 490, 2209, 2421
BsuTUI ATCGAT 2 cut(s) 36, 1228
BtgI CCRYGG 2 cut(s) 189, 491
BtsCI GGATG 4 cut(s) 919, 1291, 1783, 2404
BtsI GCAGTG 4 cut(s) 638, 997, 1559, 1885
BtsIMutI CAGTG 6 cut(s) 86, 638, 997, 1559, 1799, 1885
Cac8I GCNNGC 3 cut(s) 196, 541, 1898
CaiI CAGNNNCTG 1 cut(s) 2078
CfoI GCGC 2 cut(s) 25, 1869
Cfr10I RCCGGY 2 cut(s) 25, 763
Cfr13I GGNCC 6 cut(s) 43, 165, 196, 368, 479, 616
Cfr42I CCGCGG 1 cut(s) 192
ClaI ATCGAT 2 cut(s) 36, 1228
CseI GACGC 1 cut(s) 644
Csp6I GTAC 6 cut(s) 283, 352, 439, 692, 1755, 2020
CspCI CAANNNNNGTGG 2 cut(s) 1977, 2012
CviAII CATG 6 cut(s) 365, 442, 627, 845, 1864, 1949
CviQI GTAC 6 cut(s) 283, 352, 439, 692, 1755, 2020
DriI GACNNNNNGTC 1 cut(s) 1087
EaeI YGGCCR 2 cut(s) 159, 2419
EagI CGGCCG 1 cut(s) 159
Eam1104I CTCTTC 4 cut(s) 532, 594, 1672, 2448
Eam1105I GACNNNNNGTC 1 cut(s) 1087
EarI CTCTTC 4 cut(s) 532, 594, 1672, 2448
EciI GGCGGA 2 cut(s) 175, 1712
EclXI CGGCCG 1 cut(s) 159
Eco130I CCWWGG 1 cut(s) 1302
Eco31I GGTCTC 3 cut(s) 157, 529, 1577
Eco47I GGWCC 5 cut(s) 43, 165, 368, 479, 616
Eco52I CGGCCG 1 cut(s) 159
Eco57I CTGAAG 2 cut(s) 818, 1077
Eco88I CYCGRG 2 cut(s) 228, 1577
EcoRI GAATTC 2 cut(s) 1497, 2403
EcoRII CCWGG 3 cut(s) 84, 390, 2164
EcoT14I CCWWGG 1 cut(s) 1302
EcoT22I ATGCAT 1 cut(s) 1537
ErhI CCWWGG 1 cut(s) 1302
FaeI CATG 6 cut(s) 368, 445, 630, 848, 1867, 1952
FalI AAGNNNNNCTT 6 cut(s) 1096, 1128, 1144, 1176, 1198, 1230
FaqI GGGAC 3 cut(s) 56, 178, 2021
FatI CATG 6 cut(s) 364, 441, 626, 844, 1863, 1948
FauI CCCGC 2 cut(s) 15, 187
FauNDI CATATG 1 cut(s) 1078
FbaI TGATCA 1 cut(s) 768
Fnu4HI GCNGC 9 cut(s) 16, 63, 189, 192, 250, 253, 262, 265, 1512
FokI GGATG 4 cut(s) 926, 1298, 1790, 2411
Fsp4HI GCNGC 9 cut(s) 16, 63, 189, 192, 250, 253, 262, 265, 1512
FspAI RTGCGCAY 1 cut(s) 1868
FspBI CTAG 3 cut(s) 666, 1832, 2382
FspI TGCGCA 1 cut(s) 1868
GlaI GCGC 2 cut(s) 24, 1868
GluI GCNGC 9 cut(s) 16, 63, 189, 192, 250, 253, 262, 265, 1512
GsaI CCCAGC 3 cut(s) 276, 647, 2033
GsuI CTGGAG 2 cut(s) 1389, 1995
HaeIII GGCC 5 cut(s) 161, 198, 490, 2209, 2421
HapII CCGG 9 cut(s) 26, 46, 56, 109, 162, 371, 482, 764, 1168
HgaI GACGC 1 cut(s) 644
HhaI GCGC 2 cut(s) 25, 1869
Hin1II CATG 6 cut(s) 368, 445, 630, 848, 1867, 1952
Hin6I GCGC 2 cut(s) 23, 1867
HinP1I GCGC 2 cut(s) 23, 1867
HpaII CCGG 9 cut(s) 26, 46, 56, 109, 162, 371, 482, 764, 1168
HphI GGTGA 9 cut(s) 304, 397, 406, 427, 770, 778, 1634, 1648, 2246
Hpy166II GTNNAC 4 cut(s) 295, 675, 842, 1238
Hpy8I GTNNAC 4 cut(s) 295, 675, 842, 1238
Hpy99I CGWCG 2 cut(s) 160, 2194
HpyCH4III ACNGT 1 cut(s) 907
HpyCH4IV ACGT 3 cut(s) 114, 1272, 1506
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 188, 258, 261, 496, 1517, 1866, 1875, 2427
HpySE526I ACGT 3 cut(s) 114, 1272, 1506
Hsp92II CATG 6 cut(s) 368, 445, 630, 848, 1867, 1952
HspAI GCGC 2 cut(s) 23, 1867
Kpn2I TCCGGA 1 cut(s) 108
KpnI GGTACC 2 cut(s) 695, 1758
Ksp22I TGATCA 1 cut(s) 768
KspI CCGCGG 1 cut(s) 192
LmnI GCTCC 5 cut(s) 106, 925, 1170, 1797, 1912
Lsp1109I GCAGC 3 cut(s) 2, 276, 1523
LweI GCATC 6 cut(s) 840, 997, 1135, 1469, 1544, 1878
MaeI CTAG 3 cut(s) 666, 1832, 2382
MaeII ACGT 3 cut(s) 114, 1272, 1506
MaeIII GTNAC 6 cut(s) 604, 1640, 1804, 1847, 2107, 2181
MbiI CCGCTC 1 cut(s) 261
MflI RGATCY 3 cut(s) 655, 1429, 2035
MhlI GDGCHC 1 cut(s) 53
MlsI TGGCCA 1 cut(s) 2421
MluNI TGGCCA 1 cut(s) 2421
MlyI GAGTC 6 cut(s) 791, 869, 941, 1648, 1694, 2189
MmeI TCCRAC 3 cut(s) 837, 1664, 2063
Mox20I TGGCCA 1 cut(s) 2421
Mph1103I ATGCAT 1 cut(s) 1537
MroI TCCGGA 1 cut(s) 108
MroXI GAANNNNTTC 4 cut(s) 500, 1111, 1159, 2277
MscI TGGCCA 1 cut(s) 2421
MseI TTAA 6 cut(s) 740, 1260, 1392, 1490, 1566, 2151
MslI CAYNNNNRTG 3 cut(s) 56, 1465, 1792
Msp20I TGGCCA 1 cut(s) 2421
MspA1I CMGCKG 2 cut(s) 10, 191
MspI CCGG 9 cut(s) 26, 46, 56, 109, 162, 371, 482, 764, 1168
MspR9I CCNGG 6 cut(s) 47, 56, 86, 163, 392, 2166
Mva1269I GAATGC 1 cut(s) 782
MvaI CCWGG 3 cut(s) 86, 392, 2166
MvnI CGCG 2 cut(s) 191, 319
MwoI GCNNNNNNNGC 9 cut(s) 90, 188, 258, 261, 496, 1517, 1866, 1875, 2427
NciI CCSGG 3 cut(s) 47, 56, 163
NdeI CATATG 1 cut(s) 1078
NlaIII CATG 6 cut(s) 368, 445, 630, 848, 1867, 1952
NlaIV GGNNCC 7 cut(s) 44, 52, 102, 166, 693, 1756, 1861
NmeAIII GCCGAG 2 cut(s) 122, 159
NmuCI GTSAC 5 cut(s) 604, 1640, 1804, 1847, 2107
NsbI TGCGCA 1 cut(s) 1868
NsiI ATGCAT 1 cut(s) 1537
NspI RCATGY 1 cut(s) 848
NspV TTCGAA 1 cut(s) 236
OliI CACNNNNGTG 1 cut(s) 56
PciI ACATGT 1 cut(s) 844
PcsI WCGNNNNNNNCGW 2 cut(s) 101, 339
PctI GAATGC 1 cut(s) 782
PdmI GAANNNNTTC 4 cut(s) 500, 1111, 1159, 2277
PfeI GAWTC 4 cut(s) 170, 233, 1001, 1211
PflMI CCANNNNNTGG 1 cut(s) 1651
PkrI GCNGC 9 cut(s) 17, 64, 190, 193, 251, 254, 263, 266, 1513
Ple19I CGATCG 2 cut(s) 36, 40
PleI GAGTC 6 cut(s) 790, 868, 940, 1647, 1694, 2189
PpsI GAGTC 6 cut(s) 790, 868, 940, 1647, 1694, 2189
Ppu21I YACGTR 1 cut(s) 1273
PscI ACATGT 1 cut(s) 844
Psp1406I AACGTT 1 cut(s) 1506
Psp6I CCWGG 3 cut(s) 84, 390, 2164
PspFI CCCAGC 3 cut(s) 272, 643, 2029
PspGI CCWGG 3 cut(s) 84, 390, 2164
PspN4I GGNNCC 7 cut(s) 44, 52, 102, 166, 693, 1756, 1861
PspPI GGNCC 6 cut(s) 43, 165, 196, 368, 479, 616
PsrI GAACNNNNNNTAC 2 cut(s) 104, 136
PstNI CAGNNNCTG 1 cut(s) 2078
PsuI RGATCY 3 cut(s) 655, 1429, 2035
PvuI CGATCG 2 cut(s) 36, 40
RsaI GTAC 6 cut(s) 284, 353, 440, 693, 1756, 2021
RsaNI GTAC 6 cut(s) 283, 352, 439, 692, 1755, 2020
RseI CAYNNNNRTG 3 cut(s) 56, 1465, 1792
SacII CCGCGG 1 cut(s) 192
SaqAI TTAA 6 cut(s) 740, 1260, 1392, 1490, 1566, 2151
SatI GCNGC 9 cut(s) 16, 63, 189, 192, 250, 253, 262, 265, 1512
Sau96I GGNCC 6 cut(s) 43, 165, 196, 368, 479, 616
SchI GAGTC 6 cut(s) 791, 869, 941, 1648, 1694, 2189
ScrFI CCNGG 6 cut(s) 47, 56, 86, 163, 392, 2166
SduI GDGCHC 1 cut(s) 53
SfaNI GCATC 6 cut(s) 840, 997, 1135, 1469, 1544, 1878
SfcI CTRYAG 1 cut(s) 903
Sfr303I CCGCGG 1 cut(s) 192
SfuI TTCGAA 1 cut(s) 236
SgrBI CCGCGG 1 cut(s) 192
SinI GGWCC 5 cut(s) 43, 165, 368, 479, 616
SmiMI CAYNNNNRTG 3 cut(s) 56, 1465, 1792
SmlI CTYRAG 3 cut(s) 1241, 1709, 2197
SmoI CTYRAG 3 cut(s) 1241, 1709, 2197
SspI AATATT 2 cut(s) 1351, 1439
SspMI CTAG 3 cut(s) 666, 1832, 2382
StyD4I CCNGG 6 cut(s) 45, 54, 84, 161, 390, 2164
StyI CCWWGG 1 cut(s) 1302
TaaI ACNGT 1 cut(s) 907
TaiI ACGT 3 cut(s) 117, 1275, 1509
TaqII GACCGA 3 cut(s) 182, 633, 1944
TatI WGTACW 2 cut(s) 282, 2019
TauI GCSGC 6 cut(s) 65, 191, 194, 252, 255, 264
TfiI GAWTC 4 cut(s) 170, 233, 1001, 1211
Tru1I TTAA 6 cut(s) 740, 1260, 1392, 1490, 1566, 2151
Tru9I TTAA 6 cut(s) 740, 1260, 1392, 1490, 1566, 2151
TscAI CASTG 6 cut(s) 86, 645, 997, 1559, 1799, 1885
TseFI GTSAC 5 cut(s) 604, 1640, 1804, 1847, 2107
TseI GCWGC 3 cut(s) 15, 264, 1511
Tsp45I GTSAC 5 cut(s) 604, 1640, 1804, 1847, 2107
TspGWI ACGGA 3 cut(s) 954, 964, 2207
TspRI CASTG 6 cut(s) 86, 645, 997, 1559, 1799, 1885
Van91I CCANNNNNTGG 1 cut(s) 1651
VpaK11BI GGWCC 5 cut(s) 43, 165, 368, 479, 616
XapI RAATTY 4 cut(s) 1497, 1688, 1839, 2403
XceI RCATGY 1 cut(s) 848
XmnI GAANNNNTTC 4 cut(s) 500, 1111, 1159, 2277
XspI CTAG 3 cut(s) 666, 1832, 2382
Zsp2I ATGCAT 1 cut(s) 1537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.