pycom16g09010

Oxysterol-binding protein-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0011201
Physical Location & Seq
Reverse (-)
6043865 .. 6047864
4000 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g09010.9

Sequence Viewer

Length: 2454 bp
ATGAACCCGCTGTGCTGCATTGCGCCGGTTTCGGTCGATCGGGACCGGGGCACCCCGGTGGCGGCGAAGCAGTTGGGTGAGTGCCAGATAAGCCCGGAGGCTCCGATCCGGAACGTTAGCTATGGTTCGAGGCCGAGCTACTCGGCTCAGGTCTCGTCGGCCGGTACTGAAACGGACAGGGCTTCCGTCGCGGCGGGGCATGAGGTTGAAGATACGATCAGTGAAGCAAGGGATTCGAAGATGTTTGGCGGAGGCGTGAGCGGCAGCGTGGCTGGGATTCTGTATAAATGGGTGAACTACGGGAAGGGGTGGCGGTCGCGGTGGTTTGTGCTCGAAGACGGCGTGCTTTCGTACTATAAGGTTCATGGACCGGACAAGATTTTGATGAGCCAGGTGAGAGAGAAGGGGTTGAGGGTGATCGGAGAGGACTCGCTGAGGTATATGAAGAAGGCGAATTGGGGAAGTAATCGGCTTGGCGGTGCGGTGGCGGCGAGGCCGTGGAAGCCTTTCGGAGAAGTGCATTTGAAGGTCTCTTCAATTCGTGCCAGCAAATCAGATGATAAACGGCTTTCCATATTCACAGGAACTAAAACTCTTCACTTGCGGTGTGTATCAAGAGAGGACCGAGCTACATGGGTTGAGGCACTGCTCAGTGCTAAAGATCTGTTTCCTCGAGTCTTTACAAGCAATGATTTAGTACTTTCGAAAGATATAGTTGTCTCGACAGAGAAACTAAGACTAAGATTAGCACAGGAGGGCATTGGTGAGCCGGTGATCAAAGACTGCGAGTCAATAATGCTCTTAGAAGTGTCAGAGCTTCAGAATCAGTTGAAGGCTCTTCGGAGTAAACACGTGATGCTGTTAGAATCATTGAGACAATTGGAGACGGAGAAAATGGAGCTGGAAACTACAGTAGTGGATGAAACAAAGGAGCGTGAGTCATATGGACAGGGGGATAGGAGATTTAGTGATTTCTATTCTGTCTTATCTGAGGGCAGTGCAAGTGATTCTGATGCAGATAATGAAAGCCAAATTGAAACAGATGAAGATGAAGGAACATATTTTGATACACATGACATTTTGTCTTCAGAAGCTCTAAGAAGTGCTTCCTATCGAAGTAGGGAAGGCTTGGGGAATGATACTCTAAGAAGTGCTTCCCACCGGAGCAAGGAAGGTTTGGGAAATGGTTCTATATTTGAAAGAGATTCTTTCTTTTCCGATCGATTGCATGGAGTTGAGATCACAACAATTAAATATCCATATGTGAGAAGGAGGGATAATTTGCCAGAACCCAAGGAGAAAGAGAAGCCTATTAGCTTGTGGTCGATTATCAAGGATAATATTGGGAAGGACTTGTCTGGAGTTTGTCTTCCTGTTTATTTTAATGAACCACTCTCATCGTTGCAAAAGTGCTTTGAAGATCTGGAATATTCAAACTTGGTCGATCGAGCATCGGAATGGGGAAAGCAGGGAAATGATTTAATGAGAATTCTAAACGTTGCAGCATTTGCTGTATCTGGCTATGCATCAACAGAAGGTCGGCATTGCAAACCCTTTAATCCTCTCCTTGGGGAGACCTATGAGGCTGACTATCCAGATAAAGGACTTCGTTTTTTCTCTGAAAAGGTGAGTCACCACCCAATGGTTGTTGCTTGTCACTGTGAAGGAAGAGGTTGGAAATTCTGGGCGGACTCCAATCTCAAAGGCAAGTTTTGGGGGCGTTCTATTCAGCTTGATCCTGTGGGTACCCTAGCCTTGCAGTTTGAGGATGGGGAGATGTTTCAGTGGAGCAAGGTCACTACCTCTATATACAATATCATACTAGGAAAAATTTATTGTGACCACTATGGCACCATGCGCATCAGGGGCAGCGGCAATTATTCCTGCAAGCTAAAGTTCAAGGAGCAGTCTATTATAGACCGAAATCCACATCAGGTTCATGGATTTGTTCAAGACAATAGAACTGGAGAGAAAGTAGCAATGTTGATGGGTAAGTGGGATGAGGCAATGTACTACATGCTGGGAGATCCAACTACAAAACCAAGGGGTTATGATCCTATGACAGAAGCTGTGCTTCTCTGGGAAAGAGATGACTATGTTACCAAGACAAGATACAATCTCTCTCCATTTGCAATATCCCTTAATGAACTGACACCTGGCCTATTGGAGAGGTTACCGCCTACGGACTCAAGGCTAAGGCCAGATCAAAGACATTTGGAGAATGGCGATTATGAATTGGCAAATGCAGAGAAACTAAGACTTGAACAGCTACAAAGACAGGCAAGGAAGTTGCAAGAGAGAGGGTGGCAGCCAAGATGGTTTCGGAAGGACGAGGATGGTTGTTATAGTTATGTGGGAGGGTATTGGGAAACTAGGGAGAAGAAGAACTGGGACGGAATTCCCGATATTTTTGGCCAGAGTAGTGATTTGCCTTCGTGTTCTGGTGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oxysterol_BP PH_11

Protein Analysis

818

Amino Acids

92.64

Weight (kDa)

5.95

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13170 AT1G13170
fragaria_vesca FvH4_4g25220 FvH4_4g25220
malus_domestica MD13G1105800.v1.1 MD16G1106000.v1.1
prunus_persica Prupe.1G240400_v2.0.a1
pyrus_communis pycom13g09180 pycom16g09010
rosa_chinensis RchiOBHm_Chr4g0432411
rosa_laevigata RLG00000003003 RLG00000006845
rosa_multiflora Rmu_sc0001084.1_g000022
rosa_roxburghii Rroxscaffold_5G00373880
rosa_rugosa Rorug04G0258300 Rorug04G0258400
rosa_samantha Rh4BG321800 Rh4DG317500
rosa_wichuraiana Rw4G027300 Rw7G029610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1859
Acc65I GGTACC 1 cut(s) 1745
AccB1I GGYRCC 3 cut(s) 50, 1745, 1850
AccB7I CCANNNNNTGG 1 cut(s) 1642
AccBSI CCGCTC 1 cut(s) 261
AccII CGCG 2 cut(s) 191, 319
AccIII TCCGGA 1 cut(s) 108
AclI AACGTT 2 cut(s) 114, 1497
AclWI GGATC 4 cut(s) 100, 1730, 2021, 2048
AcoI YGGCCR 2 cut(s) 159, 2413
AcsI RAATTY 4 cut(s) 1488, 1679, 1830, 2397
AcuI CTGAAG 2 cut(s) 803, 1071
AcvI CACGTG 1 cut(s) 853
AfaI GTAC 5 cut(s) 166, 353, 699, 1747, 2012
AfiI CCNNNNNNNGG 5 cut(s) 61, 1168, 1568, 1601, 1642
AflIII ACRYGT 1 cut(s) 850
AhdI GACNNNNNGTC 2 cut(s) 787, 1081
AjnI CCWGG 2 cut(s) 390, 2155
AleI CACNNNNGTG 1 cut(s) 56
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 6 cut(s) 157, 535, 724, 868, 878, 1568
AlwI GGATC 4 cut(s) 100, 1730, 2021, 2048
AlwNI CAGNNNCTG 1 cut(s) 2069
Ama87I CYCGRG 1 cut(s) 672
Aor13HI TCCGGA 1 cut(s) 108
AoxI GGCC 6 cut(s) 131, 159, 494, 2158, 2198, 2413
ApeKI GCWGC 5 cut(s) 15, 264, 1502, 1869, 2308
ApoI RAATTY 4 cut(s) 1488, 1679, 1830, 2397
Asp700I GAANNNNTTC 4 cut(s) 506, 1105, 1153, 1186
Asp718I GGTACC 1 cut(s) 1745
AspLEI GCGC 2 cut(s) 25, 1860
AspS9I GGNCC 3 cut(s) 43, 368, 622
AsuC2I CCSGG 3 cut(s) 47, 56, 95
AsuHPI GGTGA 8 cut(s) 89, 304, 406, 427, 776, 784, 1625, 1639
AsuII TTCGAA 2 cut(s) 236, 704
AvaI CYCGRG 1 cut(s) 672
AvaII GGWCC 3 cut(s) 43, 368, 622
BaeGI GKGCMC 1 cut(s) 53
BalI TGGCCA 1 cut(s) 2415
BanI GGYRCC 3 cut(s) 50, 1745, 1850
BbrPI CACGTG 1 cut(s) 853
BbsI GAAGAC 3 cut(s) 342, 1077, 1361
Bbv12I GWGCWC 1 cut(s) 333
BbvCI CCTCAGC 1 cut(s) 434
BbvI GCAGC 5 cut(s) 2, 276, 1514, 1881, 2320
BccI CCATC 4 cut(s) 1763, 1981, 2310, 2330
BceAI ACGGC 3 cut(s) 355, 481, 581
BcgI CGANNNNNNTGC 2 cut(s) 216, 250
BciT130I CCWGG 2 cut(s) 392, 2157
BclI TGATCA 1 cut(s) 774
BcnI CCSGG 3 cut(s) 47, 56, 95
BcoDI GTCTC 6 cut(s) 157, 535, 724, 868, 878, 1568
BfaI CTAG 3 cut(s) 1751, 1823, 2373
BfmI CTRYAG 1 cut(s) 909
BglII AGATCT 2 cut(s) 661, 1420
BmcAI AGTACT 1 cut(s) 699
Bme1390I CCNGG 5 cut(s) 47, 56, 95, 392, 2157
Bme18I GGWCC 3 cut(s) 43, 368, 622
BmeRI GACNNNNNGTC 2 cut(s) 787, 1081
BmeT110I CYCGRG 1 cut(s) 672
BmgT120I GGNCC 3 cut(s) 43, 368, 622
BmiI GGNNCC 5 cut(s) 44, 52, 102, 1747, 1852
BmrFI CCNGG 5 cut(s) 47, 56, 95, 392, 2157
BmrI ACTGGG 1 cut(s) 2398
BmsI GCATC 5 cut(s) 846, 1003, 1460, 1535, 1869
BmuI ACTGGG 1 cut(s) 2398
BpiI GAAGAC 3 cut(s) 342, 1077, 1361
BpmI CTGGAG 2 cut(s) 1380, 1986
Bpu10I CCTNAGC 3 cut(s) 147, 434, 2195
Bpu14I TTCGAA 2 cut(s) 236, 704
BpuEI CTTGAG 1 cut(s) 2173
BpuMI CCSGG 3 cut(s) 47, 56, 95
Bsa29I ATCGAT 1 cut(s) 1222
BsaAI YACGTR 1 cut(s) 853
BsaI GGTCTC 3 cut(s) 157, 535, 1568
BsaJI CCNNGG 6 cut(s) 46, 54, 497, 1293, 1567, 2042
BsaWI WCCGGW 3 cut(s) 108, 370, 1161
BsaXI ACNNNNNCTCC 6 cut(s) 923, 952, 953, 982, 1959, 1989
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 1168, 1568, 1601, 1642
Bse118I RCCGGY 3 cut(s) 25, 161, 769
Bse1I ACTGG 2 cut(s) 1969, 2393
Bse3DI GCAATG 5 cut(s) 18, 694, 1543, 1986, 2013
BseAI TCCGGA 1 cut(s) 108
BseBI CCWGG 2 cut(s) 392, 2157
BseCI ATCGAT 1 cut(s) 1222
BseDI CCNNGG 6 cut(s) 46, 54, 497, 1293, 1567, 2042
BseGI GGATG 4 cut(s) 925, 1774, 2005, 2341
BseLI CCNNNNNNNGG 5 cut(s) 61, 1168, 1568, 1601, 1642
BseMI GCAATG 5 cut(s) 18, 694, 1543, 1986, 2013
BseMII CTCAG 4 cut(s) 161, 425, 664, 981
BseNI ACTGG 2 cut(s) 1969, 2393
BseSI GKGCMC 1 cut(s) 53
BseX3I CGGCCG 1 cut(s) 159
BseXI GCAGC 5 cut(s) 2, 276, 1514, 1881, 2320
BseYI CCCAGC 2 cut(s) 272, 2020
Bsh1236I CGCG 2 cut(s) 191, 319
Bsh1285I CGRYCG 6 cut(s) 36, 40, 162, 317, 1222, 1447
BshFI GGCC 6 cut(s) 133, 161, 496, 2160, 2200, 2415
BshNI GGYRCC 3 cut(s) 50, 1745, 1850
BshVI ATCGAT 1 cut(s) 1222
BsiEI CGRYCG 6 cut(s) 36, 40, 162, 317, 1222, 1447
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 672
BsiSI CCGG 9 cut(s) 26, 46, 56, 95, 109, 162, 371, 770, 1162
BslFI GGGAC 2 cut(s) 56, 2405
BslI CCNNNNNNNGG 5 cut(s) 61, 1168, 1568, 1601, 1642
BsmAI GTCTC 6 cut(s) 157, 535, 724, 868, 878, 1568
BsmBI CGTCTC 1 cut(s) 878
BsmFI GGGAC 2 cut(s) 56, 2405
BsnI GGCC 6 cut(s) 133, 161, 496, 2160, 2200, 2415
Bso31I GGTCTC 3 cut(s) 157, 535, 1568
BsoBI CYCGRG 1 cut(s) 672
Bsp119I TTCGAA 2 cut(s) 236, 704
Bsp1286I GDGCHC 2 cut(s) 53, 333
Bsp13I TCCGGA 1 cut(s) 108
BspANI GGCC 6 cut(s) 133, 161, 496, 2160, 2200, 2415
BspCNI CTCAG 4 cut(s) 160, 426, 663, 982
BspDI ATCGAT 1 cut(s) 1222
BspEI TCCGGA 1 cut(s) 108
BspFNI CGCG 2 cut(s) 191, 319
BspLI GGNNCC 5 cut(s) 44, 52, 102, 1747, 1852
BspPI GGATC 4 cut(s) 100, 1730, 2021, 2048
BspQI GCTCTTC 1 cut(s) 843
BspT104I TTCGAA 2 cut(s) 236, 704
BspT107I GGYRCC 3 cut(s) 50, 1745, 1850
BspTNI GGTCTC 3 cut(s) 157, 535, 1568
BsrBI CCGCTC 1 cut(s) 261
BsrDI GCAATG 5 cut(s) 18, 694, 1543, 1986, 2013
BsrFI RCCGGY 3 cut(s) 25, 161, 769
BsrI ACTGG 2 cut(s) 1969, 2393
BssAI RCCGGY 3 cut(s) 25, 161, 769
BssECI CCNNGG 6 cut(s) 46, 54, 497, 1293, 1567, 2042
BssT1I CCWWGG 3 cut(s) 1293, 1567, 2042
Bst2UI CCWGG 2 cut(s) 392, 2157
Bst4CI ACNGT 2 cut(s) 913, 1661
Bst6I CTCTTC 5 cut(s) 538, 600, 843, 1663, 2442
BstAPI GCANNNNNTGC 1 cut(s) 1508
BstBAI YACGTR 1 cut(s) 853
BstBI TTCGAA 2 cut(s) 236, 704
BstC8I GCNNGC 3 cut(s) 344, 547, 1889
BstDSI CCRYGG 1 cut(s) 497
BstEII GGTNACC 1 cut(s) 2172
BstF5I GGATG 4 cut(s) 925, 1774, 2005, 2341
BstFNI CGCG 2 cut(s) 191, 319
BstHHI GCGC 2 cut(s) 25, 1860
BstMAI GTCTC 6 cut(s) 157, 535, 724, 868, 878, 1568
BstMCI CGRYCG 6 cut(s) 36, 40, 162, 317, 1222, 1447
BstMWI GCNNNNNNNGC 8 cut(s) 90, 188, 261, 488, 502, 1508, 1857, 1866
BstNI CCWGG 2 cut(s) 392, 2157
BstNSI RCATGY 1 cut(s) 2020
BstPI GGTNACC 1 cut(s) 2172
BstSCI CCNGG 5 cut(s) 45, 54, 93, 390, 2155
BstSFI CTRYAG 1 cut(s) 909
BstSLI GKGCMC 1 cut(s) 53
BstUI CGCG 2 cut(s) 191, 319
BstV1I GCAGC 5 cut(s) 2, 276, 1514, 1881, 2320
BstV2I GAAGAC 3 cut(s) 342, 1077, 1361
BstX2I RGATCY 3 cut(s) 661, 1420, 2026
BstYI RGATCY 3 cut(s) 661, 1420, 2026
BstZI CGGCCG 1 cut(s) 159
Bsu15I ATCGAT 1 cut(s) 1222
BsuRI GGCC 6 cut(s) 133, 161, 496, 2160, 2200, 2415
BsuTUI ATCGAT 1 cut(s) 1222
BtgI CCRYGG 1 cut(s) 497
BtsCI GGATG 4 cut(s) 925, 1774, 2005, 2341
BtsI GCAGTG 2 cut(s) 644, 1003
BtsIMutI CAGTG 6 cut(s) 226, 644, 658, 1003, 1657, 1790
Cac8I GCNNGC 3 cut(s) 344, 547, 1889
CaiI CAGNNNCTG 1 cut(s) 2069
CfoI GCGC 2 cut(s) 25, 1860
Cfr10I RCCGGY 3 cut(s) 25, 161, 769
Cfr13I GGNCC 3 cut(s) 43, 368, 622
ClaI ATCGAT 1 cut(s) 1222
Csp6I GTAC 5 cut(s) 165, 352, 698, 1746, 2011
CviAII CATG 8 cut(s) 200, 365, 633, 1073, 1229, 1855, 1940, 2017
CviQI GTAC 5 cut(s) 165, 352, 698, 1746, 2011
DriI GACNNNNNGTC 2 cut(s) 787, 1081
EaeI YGGCCR 2 cut(s) 159, 2413
EagI CGGCCG 1 cut(s) 159
Eam1104I CTCTTC 5 cut(s) 538, 600, 843, 1663, 2442
Eam1105I GACNNNNNGTC 2 cut(s) 787, 1081
EarI CTCTTC 5 cut(s) 538, 600, 843, 1663, 2442
EciI GGCGGA 2 cut(s) 264, 1703
EclXI CGGCCG 1 cut(s) 159
Eco130I CCWWGG 3 cut(s) 1293, 1567, 2042
Eco31I GGTCTC 3 cut(s) 157, 535, 1568
Eco47I GGWCC 3 cut(s) 43, 368, 622
Eco52I CGGCCG 1 cut(s) 159
Eco57I CTGAAG 2 cut(s) 803, 1071
Eco72I CACGTG 1 cut(s) 853
Eco88I CYCGRG 1 cut(s) 672
Eco91I GGTNACC 1 cut(s) 2172
EcoO65I GGTNACC 1 cut(s) 2172
EcoRI GAATTC 2 cut(s) 1488, 2397
EcoRII CCWGG 2 cut(s) 390, 2155
EcoT14I CCWWGG 3 cut(s) 1293, 1567, 2042
EcoT22I ATGCAT 1 cut(s) 1528
ErhI CCWWGG 3 cut(s) 1293, 1567, 2042
Esp3I CGTCTC 1 cut(s) 878
FaeI CATG 8 cut(s) 203, 368, 636, 1076, 1232, 1858, 1943, 2020
FalI AAGNNNNNCTT 8 cut(s) 1090, 1122, 1138, 1170, 1192, 1224, 2058, 2090
FaqI GGGAC 2 cut(s) 56, 2405
FatI CATG 8 cut(s) 199, 364, 632, 1072, 1228, 1854, 1939, 2016
FauI CCCGC 2 cut(s) 15, 187
FauNDI CATATG 2 cut(s) 943, 1261
FbaI TGATCA 1 cut(s) 774
FokI GGATG 4 cut(s) 932, 1781, 2012, 2348
FspAI RTGCGCAY 1 cut(s) 1859
FspBI CTAG 3 cut(s) 1751, 1823, 2373
FspI TGCGCA 1 cut(s) 1859
GlaI GCGC 2 cut(s) 24, 1859
GsaI CCCAGC 2 cut(s) 276, 2024
GsuI CTGGAG 2 cut(s) 1380, 1986
HaeIII GGCC 6 cut(s) 133, 161, 496, 2160, 2200, 2415
HapII CCGG 9 cut(s) 26, 46, 56, 95, 109, 162, 371, 770, 1162
HhaI GCGC 2 cut(s) 25, 1860
Hin1II CATG 8 cut(s) 203, 368, 636, 1076, 1232, 1858, 1943, 2020
Hin6I GCGC 2 cut(s) 23, 1858
HinP1I GCGC 2 cut(s) 23, 1858
HpaII CCGG 9 cut(s) 26, 46, 56, 95, 109, 162, 371, 770, 1162
HphI GGTGA 8 cut(s) 89, 304, 406, 427, 776, 784, 1625, 1639
Hpy166II GTNNAC 2 cut(s) 295, 848
Hpy188III TCNNGA 9 cut(s) 41, 109, 615, 721, 1359, 1424, 1595, 1952, 2402
Hpy8I GTNNAC 2 cut(s) 295, 848
Hpy99I CGWCG 2 cut(s) 160, 191
HpyCH4III ACNGT 2 cut(s) 913, 1661
HpyCH4IV ACGT 3 cut(s) 114, 852, 1497
HpyF10VI GCNNNNNNNGC 8 cut(s) 90, 188, 261, 488, 502, 1508, 1857, 1866
HpySE526I ACGT 3 cut(s) 114, 852, 1497
Hsp92II CATG 8 cut(s) 203, 368, 636, 1076, 1232, 1858, 1943, 2020
HspAI GCGC 2 cut(s) 23, 1858
Kpn2I TCCGGA 1 cut(s) 108
KpnI GGTACC 1 cut(s) 1749
Ksp22I TGATCA 1 cut(s) 774
LguI GCTCTTC 1 cut(s) 843
LmnI GCTCC 6 cut(s) 106, 898, 931, 1164, 1788, 1903
Lsp1109I GCAGC 5 cut(s) 2, 276, 1514, 1881, 2320
LweI GCATC 5 cut(s) 846, 1003, 1460, 1535, 1869
MaeI CTAG 3 cut(s) 1751, 1823, 2373
MaeII ACGT 3 cut(s) 114, 852, 1497
MaeIII GTNAC 6 cut(s) 1631, 1655, 1795, 1838, 2098, 2172
MbiI CCGCTC 1 cut(s) 261
MfeI CAATTG 1 cut(s) 878
MflI RGATCY 3 cut(s) 661, 1420, 2026
MhlI GDGCHC 2 cut(s) 53, 333
MlsI TGGCCA 1 cut(s) 2415
MluNI TGGCCA 1 cut(s) 2415
MlyI GAGTC 7 cut(s) 422, 684, 797, 947, 1639, 1685, 2180
MmeI TCCRAC 2 cut(s) 1655, 2054
Mox20I TGGCCA 1 cut(s) 2415
Mph1103I ATGCAT 1 cut(s) 1528
MroI TCCGGA 1 cut(s) 108
MroXI GAANNNNTTC 4 cut(s) 506, 1105, 1153, 1186
MscI TGGCCA 1 cut(s) 2415
MseI TTAA 5 cut(s) 1251, 1383, 1481, 1557, 2142
MslI CAYNNNNRTG 2 cut(s) 56, 1456
Msp20I TGGCCA 1 cut(s) 2415
MspA1I CMGCKG 2 cut(s) 10, 1872
MspI CCGG 9 cut(s) 26, 46, 56, 95, 109, 162, 371, 770, 1162
MspR9I CCNGG 5 cut(s) 47, 56, 95, 392, 2157
MunI CAATTG 1 cut(s) 878
MvaI CCWGG 2 cut(s) 392, 2157
MvnI CGCG 2 cut(s) 191, 319
MwoI GCNNNNNNNGC 8 cut(s) 90, 188, 261, 488, 502, 1508, 1857, 1866
NciI CCSGG 3 cut(s) 47, 56, 95
NdeI CATATG 2 cut(s) 943, 1261
NlaIII CATG 8 cut(s) 203, 368, 636, 1076, 1232, 1858, 1943, 2020
NlaIV GGNNCC 5 cut(s) 44, 52, 102, 1747, 1852
NmeAIII GCCGAG 2 cut(s) 122, 159
NmuCI GTSAC 4 cut(s) 1631, 1655, 1795, 1838
NsbI TGCGCA 1 cut(s) 1859
NsiI ATGCAT 1 cut(s) 1528
NspI RCATGY 1 cut(s) 2020
NspV TTCGAA 2 cut(s) 236, 704
OliI CACNNNNGTG 1 cut(s) 56
PaeR7I CTCGAG 1 cut(s) 672
PciSI GCTCTTC 1 cut(s) 843
PcsI WCGNNNNNNNCGW 2 cut(s) 339, 2400
PdmI GAANNNNTTC 4 cut(s) 506, 1105, 1153, 1186
PfeI GAWTC 6 cut(s) 233, 277, 823, 866, 1007, 1205
PflMI CCANNNNNTGG 1 cut(s) 1642
Ple19I CGATCG 3 cut(s) 40, 1222, 1447
PleI GAGTC 7 cut(s) 422, 683, 796, 946, 1638, 1685, 2180
PmaCI CACGTG 1 cut(s) 853
PmlI CACGTG 1 cut(s) 853
PpsI GAGTC 7 cut(s) 422, 683, 796, 946, 1638, 1685, 2180
Ppu21I YACGTR 1 cut(s) 853
Psp1406I AACGTT 2 cut(s) 114, 1497
Psp6I CCWGG 2 cut(s) 390, 2155
PspCI CACGTG 1 cut(s) 853
PspEI GGTNACC 1 cut(s) 2172
PspFI CCCAGC 2 cut(s) 272, 2020
PspGI CCWGG 2 cut(s) 390, 2155
PspN4I GGNNCC 5 cut(s) 44, 52, 102, 1747, 1852
PspPI GGNCC 3 cut(s) 43, 368, 622
PspXI VCTCGAGB 1 cut(s) 672
PstNI CAGNNNCTG 1 cut(s) 2069
PsuI RGATCY 3 cut(s) 661, 1420, 2026
PvuI CGATCG 3 cut(s) 40, 1222, 1447
RsaI GTAC 5 cut(s) 166, 353, 699, 1747, 2012
RsaNI GTAC 5 cut(s) 165, 352, 698, 1746, 2011
RseI CAYNNNNRTG 2 cut(s) 56, 1456
SapI GCTCTTC 1 cut(s) 843
SaqAI TTAA 5 cut(s) 1251, 1383, 1481, 1557, 2142
Sau96I GGNCC 3 cut(s) 43, 368, 622
ScaI AGTACT 1 cut(s) 699
SchI GAGTC 7 cut(s) 422, 684, 797, 947, 1639, 1685, 2180
ScrFI CCNGG 5 cut(s) 47, 56, 95, 392, 2157
SduI GDGCHC 2 cut(s) 53, 333
SfaNI GCATC 5 cut(s) 846, 1003, 1460, 1535, 1869
SfcI CTRYAG 1 cut(s) 909
Sfr274I CTCGAG 1 cut(s) 672
SfuI TTCGAA 2 cut(s) 236, 704
SinI GGWCC 3 cut(s) 43, 368, 622
SlaI CTCGAG 1 cut(s) 672
SmiMI CAYNNNNRTG 2 cut(s) 56, 1456
SmlI CTYRAG 2 cut(s) 672, 2188
SmoI CTYRAG 2 cut(s) 672, 2188
SspI AATATT 2 cut(s) 1342, 1430
SspMI CTAG 3 cut(s) 1751, 1823, 2373
StyD4I CCNGG 5 cut(s) 45, 54, 93, 390, 2155
StyI CCWWGG 3 cut(s) 1293, 1567, 2042
TaaI ACNGT 2 cut(s) 913, 1661
TaiI ACGT 3 cut(s) 117, 855, 1500
TaqII GACCGA 3 cut(s) 22, 639, 1935
TatI WGTACW 2 cut(s) 697, 2010
TauI GCSGC 5 cut(s) 65, 194, 264, 491, 1875
TfiI GAWTC 6 cut(s) 233, 277, 823, 866, 1007, 1205
Tru1I TTAA 5 cut(s) 1251, 1383, 1481, 1557, 2142
Tru9I TTAA 5 cut(s) 1251, 1383, 1481, 1557, 2142
TscAI CASTG 6 cut(s) 226, 651, 658, 1003, 1664, 1790
TseFI GTSAC 4 cut(s) 1631, 1655, 1795, 1838
TseI GCWGC 5 cut(s) 15, 264, 1502, 1869, 2308
Tsp45I GTSAC 4 cut(s) 1631, 1655, 1795, 1838
TspGWI ACGGA 5 cut(s) 175, 188, 902, 2198, 2409
TspRI CASTG 6 cut(s) 226, 651, 658, 1003, 1664, 1790
Van91I CCANNNNNTGG 1 cut(s) 1642
VpaK11BI GGWCC 3 cut(s) 43, 368, 622
XapI RAATTY 4 cut(s) 1488, 1679, 1830, 2397
XceI RCATGY 1 cut(s) 2020
XhoI CTCGAG 1 cut(s) 672
XmnI GAANNNNTTC 4 cut(s) 506, 1105, 1153, 1186
XspI CTAG 3 cut(s) 1751, 1823, 2373
ZrmI AGTACT 1 cut(s) 699
Zsp2I ATGCAT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.