Rw7G029610

Oxysterol-binding protein-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0011201
Physical Location & Seq
Forward (+)
41163587 .. 41168521
4935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G029610.1

Sequence Viewer

Length: 2298 bp
ATGAACCCGCTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACCAGGCCGACCCGGTCACGGCGAAGCAGTCTGGTCACTACCAGCTCGGACTCGACGCGGCGGTTCCGGTTCGAAACGTCAGCTACGGCTCGAAGCCGAGCTACTCCGCTCAGGTCTCGTCGGCGGGGACCGAATCGGACAGAGCCTCCCGAGAGATTCGAAGGCGTTCGGCGTTCGCCGGAATTCTGTACAAGTGGGTGAACTACGGCAAGGGGTGGAGGTCGAGGTGGTTTCTGCTGGAAGACGGCATTCTGATGAGCCCGGCCAGAGAGAAAGGCGTGACGGTGATCGGAGAGGACTCGTTGAGGTATATGAAGAAGGCTAATTGGAATAGAAATCGGCTTGGCTTGCCGGCGAGGAGGCCGTGCAAGCCTTTCGGCGAAGTGCATTTGAAGGTCTCTTCAATTCGTGCCAGCAAATCAGATGATAAAAGGCTTTCCATATTCACAGGAACTAAAACTCTTCACTTGTGTTGTTTATCTAGAGAGGACAGAGCTGCATGGATTGAGGCATTGCTGGCTGCTAAAGATCTTTTCCCCAGAGTTTTGTCAAGCAATGATTTAGTGCCTTCAGAAGATATAGTTGAGGGAGTTGGTGAGCCAGTTGTCAAACACTGCGAGTTAATTATCCTTTTAGAAGTCTCAGAGCTGCAAAACCAGTTGAAGGCTCTTCAGAGTAAACATGTTATGTTGTTAGACACATTGAGACAATTGGAGACAGAGAAAATAGAGCTGGAAACTACAGTAGTGGACGAAACAAAGGAGCGTGAGTCATACTGCAGTGATTTTTATTCCGTCATGTCAGAGGGCAGTGGAAGTGATTCTGGTGCAGAAAATGAAAGTCAAGATGGAGGAGATGTTGAAACAAATGAAGATGAAGGAACATACTTTGATACTTATGATATTTTGCCTTCAGATGCTTTAAGAAGTGCATCCTACCGGAGTAGAGAAGATGCTTTAAGAAGCGCTTCCTATCGGAGTAGGGATGGTTTGGGAAACGGTGGTGGAGATTCTCTCTTTTCTGATCGATTGCATGCAGTTCAGGAGATCATGACAGTTAAATATCCATCTGTGAAAAGGAGGGATAATTTGCCAGAACCAAAGGAGAAAGATAAGCCTATTGGCTTGTGGTCAATTATCAAGGACAATATTGGAAAGGACTTATCTGGAGTTTGTCTTCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGCTTTGAAGATCTGGAGTATTCCTACTTGGTAGATCGAGTATTGGAATGGGGAAAGCAGGGGAATGACTTGGTGAGAATTCTCCACGTTGCAGCTTTTGCTGTATCTGGTTATGCATCAACAGAAGGTCGGCAGTGCAAACCCTTCAATCCTCTCCTGGGGGAGACCTATGAGGCTGATTACCCGGATAAAGGACTTTGTTTCTTTTCTGAAAAGGTGAGTCACCACCCAATGATTGTTGCCTGTCACTGTCACGGAAGAAATTGGAAATTTTGGGCTGACTCCAACCTTAAAGGCAAGTTTTGGGGGCGTTCTATACAGCTTGATCCTGTGGGTCTGCTTAACATGCAGTTTGAGGATGGGGAAACATTTCAGTGGAGCAAGGTCACTACTTCCATATACAATATCATACTAGGGAAAATTTACTGTGACCATTATGGCACCATGCGCATCAAGGGAAGTGGAAATTACTCATGTAAGCTAAAGTTCAAGGAGCAGTCTATCATAGACCGAAACCCACATCAGGTTCATGGATTTGTTCAAGACAATCGAACTGGAAAGAAAGTAGCAATGTTGATGGGGAAGTGGGATGAGGCAATGTACTATGTTCTAGGAGATCCAACTACAAAACCAAAGGGTTATGATCCAATGACGGAGGCTGTGCTGCTCTGGGAAAGGGAAAACTACGTTACTAAGACAAGATATAATTTCTCTCCTTTTGCAATATCCCTGAATGAATTAACACCTGGACTATTGGAGAAATTGCCTCCAACAGACTCGAGGCTGAGGCCAGATCAAAGACATTTAGAAAATGGTGAATATGAATTGGCAAATGCAGAAAAACTAAGACTTGAACAGCTACAGAGACAGGAAGTTGCAAGAGAGGGCTGGCAGCCAAGATGGTTTCAAAGAGATCAGGACGGTTGTTATAAGTACACAGGTGGGTATTGGGAAACTAGGGAGAAAAACAATTGGGATGGAATTCCTGATATTTTTGGCCTGAGTAGTGATACGCCCTCGAGTTCTGTTGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oxysterol_BP PH_11

Protein Analysis

765

Amino Acids

86.8

Weight (kDa)

5.83

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_11 PF15413 78 - 187 5.9e-11 Pleckstrin homology domain
Oxysterol_BP PF01237 390 - 741 3.5e-122 Oxysterol-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011201)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13170 AT1G13170
fragaria_vesca FvH4_4g25220 FvH4_4g25220
malus_domestica MD13G1105800.v1.1 MD16G1106000.v1.1
prunus_persica Prupe.1G240400_v2.0.a1
pyrus_communis pycom13g09180 pycom16g09010
rosa_chinensis RchiOBHm_Chr4g0432411
rosa_laevigata RLG00000003003 RLG00000006845
rosa_multiflora Rmu_sc0001084.1_g000022
rosa_roxburghii Rroxscaffold_5G00373880
rosa_rugosa Rorug04G0258300 Rorug04G0258400
rosa_samantha Rh4BG321800 Rh4DG317500
rosa_wichuraiana Rw4G027300 Rw7G029610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2190
Acc16I TGCGCA 1 cut(s) 1709
AccB1I GGYRCC 1 cut(s) 1700
AccBSI CCGCTC 1 cut(s) 152
AccII CGCG 1 cut(s) 101
AciI CCGC 5 cut(s) 8, 101, 104, 150, 167
AclWI GGATC 3 cut(s) 1580, 1871, 1898
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 5 cut(s) 225, 1338, 1529, 1680, 2241
AcuI CTGAAG 3 cut(s) 597, 698, 939
AfaI GTAC 3 cut(s) 233, 1862, 2195
AfeI AGCGCT 1 cut(s) 1009
AfiI CCNNNNNNNGG 5 cut(s) 61, 706, 1418, 1451, 1783
AflIII ACRYGT 1 cut(s) 724
AjnI CCWGG 3 cut(s) 45, 1416, 2005
Alw26I GTCTC 7 cut(s) 163, 445, 688, 742, 752, 1418, 2119
AlwI GGATC 3 cut(s) 1580, 1871, 1898
Ama87I CYCGRG 3 cut(s) 192, 2038, 2278
Aor51HI AGCGCT 1 cut(s) 1009
AoxI GGCC 5 cut(s) 48, 306, 404, 2048, 2257
ApeKI GCWGC 7 cut(s) 15, 539, 563, 691, 1352, 1924, 2152
ApoI RAATTY 5 cut(s) 225, 1338, 1529, 1680, 2241
Asp700I GAANNNNTTC 4 cut(s) 208, 862, 1009, 1629
AspLEI GCGC 2 cut(s) 1010, 1710
AspS9I GGNCC 2 cut(s) 43, 171
AsuC2I CCSGG 3 cut(s) 56, 305, 1445
AsuHPI GGTGA 7 cut(s) 253, 340, 650, 1345, 1475, 1489, 2087
AsuII TTCGAA 2 cut(s) 115, 202
AvaI CYCGRG 3 cut(s) 192, 2038, 2278
AvaII GGWCC 2 cut(s) 43, 171
BanI GGYRCC 1 cut(s) 1700
BanII GRGCYC 1 cut(s) 305
BarI GAAGNNNNNNTAC 2 cut(s) 128, 160
BbsI GAAGAC 2 cut(s) 291, 1211
BbvCI CCTCAGC 1 cut(s) 2045
BbvI GCAGC 7 cut(s) 2, 526, 550, 678, 1364, 1911, 2164
BccI CCATC 7 cut(s) 884, 1022, 1117, 1613, 1831, 2154, 2231
BceAI ACGGC 5 cut(s) 78, 145, 265, 304, 391
BcgI CGANNNNNNTGC 2 cut(s) 400, 434
BciT130I CCWGG 3 cut(s) 47, 1418, 2007
BcnI CCSGG 3 cut(s) 56, 305, 1445
BcoDI GTCTC 7 cut(s) 163, 445, 688, 742, 752, 1418, 2119
BfaI CTAG 4 cut(s) 525, 1673, 1871, 2217
BfmI CTRYAG 3 cut(s) 783, 820, 2120
BfoI RGCGCY 1 cut(s) 1011
BglII AGATCT 2 cut(s) 571, 1270
BisI GCNGC 8 cut(s) 16, 102, 540, 564, 692, 1353, 1925, 2153
BlsI GCNGC 8 cut(s) 17, 103, 541, 565, 693, 1354, 1926, 2154
Bme1390I CCNGG 6 cut(s) 47, 56, 305, 1418, 1445, 2007
Bme18I GGWCC 2 cut(s) 43, 171
BmeT110I CYCGRG 3 cut(s) 192, 2038, 2278
BmgT120I GGNCC 2 cut(s) 43, 171
BmiI GGNNCC 4 cut(s) 44, 108, 172, 1702
BmrFI CCNGG 6 cut(s) 47, 56, 305, 1418, 1445, 2007
BmsI GCATC 5 cut(s) 949, 983, 985, 1385, 1719
BpiI GAAGAC 2 cut(s) 291, 1211
BplI GAGNNNNNCTC 2 cut(s) 1041, 1073
BpmI CTGGAG 2 cut(s) 1230, 1295
Bpu10I CCTNAGC 2 cut(s) 153, 2045
Bpu14I TTCGAA 2 cut(s) 115, 202
BpuMI CCSGG 3 cut(s) 56, 305, 1445
Bsa29I ATCGAT 2 cut(s) 36, 1069
BsaI GGTCTC 3 cut(s) 163, 445, 1418
BsaJI CCNNGG 1 cut(s) 1417
BsaWI WCCGGW 3 cut(s) 25, 109, 981
BsaXI ACNNNNNCTCC 6 cut(s) 173, 203, 797, 827, 885, 915
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 706, 1418, 1451, 1783
Bse118I RCCGGY 1 cut(s) 394
Bse1I ACTGG 3 cut(s) 644, 700, 1819
Bse3DI GCAATG 6 cut(s) 18, 554, 604, 1250, 1836, 1863
BseBI CCWGG 3 cut(s) 47, 1418, 2007
BseCI ATCGAT 2 cut(s) 36, 1069
BseDI CCNNGG 1 cut(s) 1417
BseGI GGATG 5 cut(s) 974, 1033, 1624, 1855, 2242
BseLI CCNNNNNNNGG 5 cut(s) 61, 706, 1418, 1451, 1783
BseMI GCAATG 6 cut(s) 18, 554, 604, 1250, 1836, 1863
BseMII CTCAG 4 cut(s) 167, 699, 2036, 2252
BseNI ACTGG 3 cut(s) 644, 700, 1819
BseRI GAGGAG 2 cut(s) 415, 909
BseXI GCAGC 7 cut(s) 2, 526, 550, 678, 1364, 1911, 2164
BsgI GTGCAG 1 cut(s) 891
Bsh1236I CGCG 1 cut(s) 101
Bsh1285I CGRYCG 2 cut(s) 36, 40
BshFI GGCC 5 cut(s) 50, 308, 406, 2050, 2259
BshNI GGYRCC 1 cut(s) 1700
BshVI ATCGAT 2 cut(s) 36, 1069
BsiEI CGRYCG 2 cut(s) 36, 40
BsiHKCI CYCGRG 3 cut(s) 192, 2038, 2278
BsiSI CCGG 8 cut(s) 26, 56, 110, 222, 305, 395, 982, 1445
BslFI GGGAC 2 cut(s) 56, 184
BslI CCNNNNNNNGG 5 cut(s) 61, 706, 1418, 1451, 1783
BsmAI GTCTC 7 cut(s) 163, 445, 688, 742, 752, 1418, 2119
BsmFI GGGAC 2 cut(s) 56, 184
BsmI GAATGC 1 cut(s) 291
BsnI GGCC 5 cut(s) 50, 308, 406, 2050, 2259
Bso31I GGTCTC 3 cut(s) 163, 445, 1418
BsoBI CYCGRG 3 cut(s) 192, 2038, 2278
Bsp119I TTCGAA 2 cut(s) 115, 202
Bsp1286I GDGCHC 1 cut(s) 305
Bsp1407I TGTACA 1 cut(s) 231
BspACI CCGC 5 cut(s) 8, 101, 104, 150, 167
BspANI GGCC 5 cut(s) 50, 308, 406, 2050, 2259
BspCNI CTCAG 4 cut(s) 166, 698, 2037, 2253
BspDI ATCGAT 2 cut(s) 36, 1069
BspFNI CGCG 1 cut(s) 101
BspHI TCATGA 1 cut(s) 1092
BspLI GGNNCC 4 cut(s) 44, 108, 172, 1702
BspMAI CTGCAG 1 cut(s) 824
BspPI GGATC 3 cut(s) 1580, 1871, 1898
BspQI GCTCTTC 1 cut(s) 717
BspT104I TTCGAA 2 cut(s) 115, 202
BspT107I GGYRCC 1 cut(s) 1700
BspTNI GGTCTC 3 cut(s) 163, 445, 1418
BsrBI CCGCTC 1 cut(s) 152
BsrDI GCAATG 6 cut(s) 18, 554, 604, 1250, 1836, 1863
BsrFI RCCGGY 1 cut(s) 394
BsrGI TGTACA 1 cut(s) 231
BsrI ACTGG 3 cut(s) 644, 700, 1819
BssAI RCCGGY 1 cut(s) 394
BssECI CCNNGG 1 cut(s) 1417
Bst2UI CCWGG 3 cut(s) 47, 1418, 2007
Bst4CI ACNGT 7 cut(s) 328, 787, 1043, 1099, 1511, 1688, 2183
Bst6I CTCTTC 5 cut(s) 448, 510, 717, 1252, 2286
BstAPI GCANNNNNTGC 1 cut(s) 1358
BstAUI TGTACA 1 cut(s) 231
BstBI TTCGAA 2 cut(s) 115, 202
BstC8I GCNNGC 7 cut(s) 392, 396, 413, 457, 561, 1077, 2150
BstDEI CTNAG 6 cut(s) 153, 685, 1953, 2045, 2105, 2261
BstF5I GGATG 5 cut(s) 974, 1033, 1624, 1855, 2242
BstFNI CGCG 1 cut(s) 101
BstH2I RGCGCY 1 cut(s) 1011
BstHHI GCGC 2 cut(s) 1010, 1710
BstMAI GTCTC 7 cut(s) 163, 445, 688, 742, 752, 1418, 2119
BstMCI CGRYCG 2 cut(s) 36, 40
BstMWI GCNNNNNNNGC 6 cut(s) 391, 412, 560, 1358, 1606, 1707
BstNI CCWGG 3 cut(s) 47, 1418, 2007
BstNSI RCATGY 3 cut(s) 728, 1079, 1609
BstSCI CCNGG 6 cut(s) 45, 54, 303, 1416, 1443, 2005
BstSFI CTRYAG 3 cut(s) 783, 820, 2120
BstUI CGCG 1 cut(s) 101
BstV1I GCAGC 7 cut(s) 2, 526, 550, 678, 1364, 1911, 2164
BstV2I GAAGAC 2 cut(s) 291, 1211
BstX2I RGATCY 3 cut(s) 571, 1270, 1876
BstYI RGATCY 3 cut(s) 571, 1270, 1876
Bsu15I ATCGAT 2 cut(s) 36, 1069
BsuRI GGCC 5 cut(s) 50, 308, 406, 2050, 2259
BsuTUI ATCGAT 2 cut(s) 36, 1069
BtsCI GGATG 5 cut(s) 974, 1033, 1624, 1855, 2242
BtsI GCAGTG 4 cut(s) 655, 829, 859, 1400
BtsIMutI CAGTG 6 cut(s) 655, 829, 859, 1400, 1507, 1640
Cac8I GCNNGC 7 cut(s) 392, 396, 413, 457, 561, 1077, 2150
CciI TCATGA 1 cut(s) 1092
CfoI GCGC 2 cut(s) 1010, 1710
Cfr10I RCCGGY 1 cut(s) 394
Cfr13I GGNCC 2 cut(s) 43, 171
ClaI ATCGAT 2 cut(s) 36, 1069
CseI GACGC 1 cut(s) 107
Csp6I GTAC 3 cut(s) 232, 1861, 2194
CspCI CAANNNNNGTGG 2 cut(s) 1702, 1737
CviAII CATG 9 cut(s) 543, 725, 841, 1076, 1093, 1606, 1705, 1734, 1790
CviQI GTAC 3 cut(s) 232, 1861, 2194
DdeI CTNAG 6 cut(s) 153, 685, 1953, 2045, 2105, 2261
EaeI YGGCCR 1 cut(s) 306
Eam1104I CTCTTC 5 cut(s) 448, 510, 717, 1252, 2286
EarI CTCTTC 5 cut(s) 448, 510, 717, 1252, 2286
Eco24I GRGCYC 1 cut(s) 305
Eco31I GGTCTC 3 cut(s) 163, 445, 1418
Eco47I GGWCC 2 cut(s) 43, 171
Eco47III AGCGCT 1 cut(s) 1009
Eco57I CTGAAG 3 cut(s) 597, 698, 939
Eco88I CYCGRG 3 cut(s) 192, 2038, 2278
EcoRI GAATTC 3 cut(s) 225, 1338, 2241
EcoRII CCWGG 3 cut(s) 45, 1416, 2005
EcoT22I ATGCAT 1 cut(s) 1378
EcoT38I GRGCYC 1 cut(s) 305
FaeI CATG 9 cut(s) 546, 728, 844, 1079, 1096, 1609, 1708, 1737, 1793
FalI AAGNNNNNCTT 2 cut(s) 994, 1026
FaqI GGGAC 2 cut(s) 56, 184
FatI CATG 9 cut(s) 542, 724, 840, 1075, 1092, 1605, 1704, 1733, 1789
FauI CCCGC 2 cut(s) 15, 160
Fnu4HI GCNGC 8 cut(s) 16, 102, 540, 564, 692, 1353, 1925, 2153
FokI GGATG 5 cut(s) 961, 1040, 1631, 1862, 2249
FriOI GRGCYC 1 cut(s) 305
Fsp4HI GCNGC 8 cut(s) 16, 102, 540, 564, 692, 1353, 1925, 2153
FspAI RTGCGCAY 1 cut(s) 1709
FspBI CTAG 4 cut(s) 525, 1673, 1871, 2217
FspI TGCGCA 1 cut(s) 1709
GlaI GCGC 2 cut(s) 1009, 1709
GluI GCNGC 8 cut(s) 16, 102, 540, 564, 692, 1353, 1925, 2153
GsuI CTGGAG 2 cut(s) 1230, 1295
HaeII RGCGCY 1 cut(s) 1011
HaeIII GGCC 5 cut(s) 50, 308, 406, 2050, 2259
HapII CCGG 8 cut(s) 26, 56, 110, 222, 305, 395, 982, 1445
HgaI GACGC 1 cut(s) 107
HhaI GCGC 2 cut(s) 1010, 1710
Hin1II CATG 9 cut(s) 546, 728, 844, 1079, 1096, 1609, 1708, 1737, 1793
Hin6I GCGC 2 cut(s) 1008, 1708
HinP1I GCGC 2 cut(s) 1008, 1708
HpaII CCGG 8 cut(s) 26, 56, 110, 222, 305, 395, 982, 1445
HphI GGTGA 7 cut(s) 253, 340, 650, 1345, 1475, 1489, 2087
Hpy166II GTNNAC 4 cut(s) 244, 722, 793, 2196
Hpy8I GTNNAC 4 cut(s) 244, 722, 793, 2196
Hpy99I CGWCG 2 cut(s) 101, 166
HpyAV CCTTC 9 cut(s) 198, 355, 430, 621, 700, 914, 963, 1379, 1414
HpyCH4III ACNGT 7 cut(s) 328, 787, 1043, 1099, 1511, 1688, 2183
HpyCH4IV ACGT 3 cut(s) 120, 1347, 1947
HpyF10VI GCNNNNNNNGC 6 cut(s) 391, 412, 560, 1358, 1606, 1707
HpyF3I CTNAG 6 cut(s) 153, 685, 1953, 2045, 2105, 2261
HpySE526I ACGT 3 cut(s) 120, 1347, 1947
Hsp92II CATG 9 cut(s) 546, 728, 844, 1079, 1096, 1609, 1708, 1737, 1793
HspAI GCGC 2 cut(s) 1008, 1708
KroI GCCGGC 1 cut(s) 394
KroNI GCCGGC 1 cut(s) 396
LguI GCTCTTC 1 cut(s) 717
LmnI GCTCC 4 cut(s) 28, 805, 1638, 1753
Lsp1109I GCAGC 7 cut(s) 2, 526, 550, 678, 1364, 1911, 2164
LweI GCATC 5 cut(s) 949, 983, 985, 1385, 1719
MaeI CTAG 4 cut(s) 525, 1673, 1871, 2217
MaeII ACGT 3 cut(s) 120, 1347, 1947
MaeIII GTNAC 9 cut(s) 58, 77, 322, 1481, 1505, 1511, 1645, 1688, 1948
MbiI CCGCTC 1 cut(s) 152
MfeI CAATTG 2 cut(s) 752, 2230
MflI RGATCY 3 cut(s) 571, 1270, 1876
MhlI GDGCHC 1 cut(s) 305
MlyI GAGTC 6 cut(s) 87, 335, 821, 1489, 1535, 2030
MmeI TCCRAC 3 cut(s) 1569, 1904, 2054
Mph1103I ATGCAT 1 cut(s) 1378
MroNI GCCGGC 1 cut(s) 394
MroXI GAANNNNTTC 4 cut(s) 208, 862, 1009, 1629
MseI TTAA 8 cut(s) 665, 965, 1001, 1101, 1233, 1551, 1602, 2000
MslI CAYNNNNRTG 2 cut(s) 296, 1633
MspA1I CMGCKG 1 cut(s) 10
MspI CCGG 8 cut(s) 26, 56, 110, 222, 305, 395, 982, 1445
MspR9I CCNGG 6 cut(s) 47, 56, 305, 1418, 1445, 2007
MunI CAATTG 2 cut(s) 752, 2230
Mva1269I GAATGC 1 cut(s) 291
MvaI CCWGG 3 cut(s) 47, 1418, 2007
MvnI CGCG 1 cut(s) 101
MwoI GCNNNNNNNGC 6 cut(s) 391, 412, 560, 1358, 1606, 1707
NaeI GCCGGC 1 cut(s) 396
NciI CCSGG 3 cut(s) 56, 305, 1445
NgoMIV GCCGGC 1 cut(s) 394
NlaIII CATG 9 cut(s) 546, 728, 844, 1079, 1096, 1609, 1708, 1737, 1793
NlaIV GGNNCC 4 cut(s) 44, 108, 172, 1702
NmeAIII GCCGAG 1 cut(s) 165
NmuCI GTSAC 8 cut(s) 58, 77, 322, 1481, 1505, 1511, 1645, 1688
NsbI TGCGCA 1 cut(s) 1709
NsiI ATGCAT 1 cut(s) 1378
NspI RCATGY 3 cut(s) 728, 1079, 1609
NspV TTCGAA 2 cut(s) 115, 202
PaeI GCATGC 1 cut(s) 1079
PaeR7I CTCGAG 2 cut(s) 2038, 2278
PagI TCATGA 1 cut(s) 1092
PciI ACATGT 1 cut(s) 724
PciSI GCTCTTC 1 cut(s) 717
PctI GAATGC 1 cut(s) 291
PdiI GCCGGC 1 cut(s) 396
PdmI GAANNNNTTC 4 cut(s) 208, 862, 1009, 1629
PfeI GAWTC 4 cut(s) 176, 199, 863, 1052
PflFI GACNNNGTC 1 cut(s) 56
PkrI GCNGC 8 cut(s) 17, 103, 541, 565, 693, 1354, 1926, 2154
Ple19I CGATCG 2 cut(s) 36, 40
PleI GAGTC 6 cut(s) 87, 335, 820, 1488, 1535, 2030
PpsI GAGTC 6 cut(s) 87, 335, 820, 1488, 1535, 2030
PscI ACATGT 1 cut(s) 724
PsiI TTATAA 1 cut(s) 2190
Psp6I CCWGG 3 cut(s) 45, 1416, 2005
PspGI CCWGG 3 cut(s) 45, 1416, 2005
PspN4I GGNNCC 4 cut(s) 44, 108, 172, 1702
PspPI GGNCC 2 cut(s) 43, 171
PspXI VCTCGAGB 2 cut(s) 2038, 2278
PstI CTGCAG 1 cut(s) 824
PsuI RGATCY 3 cut(s) 571, 1270, 1876
PsyI GACNNNGTC 1 cut(s) 56
PvuI CGATCG 2 cut(s) 36, 40
RsaI GTAC 3 cut(s) 233, 1862, 2195
RsaNI GTAC 3 cut(s) 232, 1861, 2194
RseI CAYNNNNRTG 2 cut(s) 296, 1633
SapI GCTCTTC 1 cut(s) 717
SaqAI TTAA 8 cut(s) 665, 965, 1001, 1101, 1233, 1551, 1602, 2000
SatI GCNGC 8 cut(s) 16, 102, 540, 564, 692, 1353, 1925, 2153
Sau96I GGNCC 2 cut(s) 43, 171
SchI GAGTC 6 cut(s) 87, 335, 821, 1489, 1535, 2030
ScrFI CCNGG 6 cut(s) 47, 56, 305, 1418, 1445, 2007
SduI GDGCHC 1 cut(s) 305
SfaNI GCATC 5 cut(s) 949, 983, 985, 1385, 1719
SfcI CTRYAG 3 cut(s) 783, 820, 2120
Sfr274I CTCGAG 2 cut(s) 2038, 2278
SfuI TTCGAA 2 cut(s) 115, 202
SinI GGWCC 2 cut(s) 43, 171
SlaI CTCGAG 2 cut(s) 2038, 2278
SmiMI CAYNNNNRTG 2 cut(s) 296, 1633
SmlI CTYRAG 2 cut(s) 2038, 2278
SmoI CTYRAG 2 cut(s) 2038, 2278
SphI GCATGC 1 cut(s) 1079
SsiI CCGC 5 cut(s) 8, 101, 104, 150, 167
SspI AATATT 1 cut(s) 1192
SspMI CTAG 4 cut(s) 525, 1673, 1871, 2217
StyD4I CCNGG 6 cut(s) 45, 54, 303, 1416, 1443, 2005
TaaI ACNGT 7 cut(s) 328, 787, 1043, 1099, 1511, 1688, 2183
TaiI ACGT 3 cut(s) 123, 1350, 1950
TaqII GACCGA 2 cut(s) 188, 1785
TatI WGTACW 3 cut(s) 231, 1860, 2193
TauI GCSGC 1 cut(s) 104
TfiI GAWTC 4 cut(s) 176, 199, 863, 1052
Tru1I TTAA 8 cut(s) 665, 965, 1001, 1101, 1233, 1551, 1602, 2000
Tru9I TTAA 8 cut(s) 665, 965, 1001, 1101, 1233, 1551, 1602, 2000
TscAI CASTG 6 cut(s) 662, 829, 859, 1400, 1514, 1640
TseFI GTSAC 8 cut(s) 58, 77, 322, 1481, 1505, 1511, 1645, 1688
TseI GCWGC 7 cut(s) 15, 539, 563, 691, 1352, 1924, 2152
Tsp45I GTSAC 8 cut(s) 58, 77, 322, 1481, 1505, 1511, 1645, 1688
TspGWI ACGGA 3 cut(s) 826, 1530, 1928
TspRI CASTG 6 cut(s) 662, 829, 859, 1400, 1514, 1640
Tth111I GACNNNGTC 1 cut(s) 56
VpaK11BI GGWCC 2 cut(s) 43, 171
XapI RAATTY 5 cut(s) 225, 1338, 1529, 1680, 2241
XbaI TCTAGA 1 cut(s) 524
XceI RCATGY 3 cut(s) 728, 1079, 1609
XhoI CTCGAG 2 cut(s) 2038, 2278
XmnI GAANNNNTTC 4 cut(s) 208, 862, 1009, 1629
XspI CTAG 4 cut(s) 525, 1673, 1871, 2217
Zsp2I ATGCAT 1 cut(s) 1378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.