synapsis
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10710 AT1G10710 |
| fragaria_vesca | FvH4_4g25900 FvH4_4g25900 FvH4_4g25900 |
| malus_domestica | MD13G1097800.v1.1 MD13G1097900.v1.1 |
| prunus_persica | Prupe.1G247500_v2.0.a1 Prupe.1G247600_v2.0.a1 Prupe.1G247600_v2.0.a1 |
| pyrus_communis | pycom13g08550 |
| rosa_chinensis | RchiOBHm_Chr4g0433351 |
| rosa_laevigata | RLG00000006761 |
| rosa_multiflora | Rmu_sc0000354.1_g000013 Rmu_sc0000354.1_g000014 Rmu_sc0000759.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00374900 |
| rosa_rugosa | Rorug04G0268000 |
| rosa_samantha | Rh4AG322800 Rh4BG330500 Rh4CG345900 Rh4DG327000 |
| rosa_wichuraiana | Rw4G027940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1030 |
| AccBSI | CCGCTC | 1 cut(s) | 103 |
| AccII | CGCG | 1 cut(s) | 688 |
| AciI | CCGC | 1 cut(s) | 103 |
| AclWI | GGATC | 1 cut(s) | 550 |
| AcoI | YGGCCR | 1 cut(s) | 200 |
| AcsI | RAATTY | 3 cut(s) | 434, 481, 549 |
| AcuI | CTGAAG | 1 cut(s) | 277 |
| AcvI | CACGTG | 1 cut(s) | 156 |
| AdeI | CACNNNGTG | 1 cut(s) | 288 |
| AfaI | GTAC | 4 cut(s) | 14, 385, 640, 691 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 380, 594, 595, 1030 |
| AflIII | ACRYGT | 1 cut(s) | 155 |
| AgsI | TTSAA | 5 cut(s) | 490, 502, 521, 613, 788 |
| AjnI | CCWGG | 3 cut(s) | 364, 377, 745 |
| AluBI | AGCT | 8 cut(s) | 150, 206, 236, 247, 331, 405, 660, 674 |
| AluI | AGCT | 8 cut(s) | 150, 206, 236, 247, 331, 405, 660, 674 |
| Alw21I | GWGCWC | 1 cut(s) | 318 |
| Alw26I | GTCTC | 3 cut(s) | 223, 358, 633 |
| AlwI | GGATC | 1 cut(s) | 550 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 563 |
| Ama87I | CYCGRG | 1 cut(s) | 387 |
| AoxI | GGCC | 2 cut(s) | 200, 344 |
| ApeKI | GCWGC | 1 cut(s) | 902 |
| ApoI | RAATTY | 3 cut(s) | 434, 481, 549 |
| AspS9I | GGNCC | 2 cut(s) | 112, 427 |
| AsuC2I | CCSGG | 1 cut(s) | 596 |
| AsuHPI | GGTGA | 7 cut(s) | 85, 645, 745, 767, 850, 872, 1049 |
| AvaI | CYCGRG | 1 cut(s) | 387 |
| AvaII | GGWCC | 2 cut(s) | 112, 427 |
| AxyI | CCTNAGG | 1 cut(s) | 348 |
| BbrPI | CACGTG | 1 cut(s) | 156 |
| BbsI | GAAGAC | 1 cut(s) | 567 |
| Bbv12I | GWGCWC | 1 cut(s) | 318 |
| BbvCI | CCTCAGC | 1 cut(s) | 590 |
| BbvI | GCAGC | 1 cut(s) | 914 |
| BccI | CCATC | 1 cut(s) | 272 |
| BceAI | ACGGC | 2 cut(s) | 215, 377 |
| BciT130I | CCWGG | 3 cut(s) | 366, 379, 747 |
| BcnI | CCSGG | 1 cut(s) | 596 |
| BcoDI | GTCTC | 3 cut(s) | 223, 358, 633 |
| BfaI | CTAG | 2 cut(s) | 96, 852 |
| BfmI | CTRYAG | 3 cut(s) | 332, 406, 1049 |
| BglII | AGATCT | 1 cut(s) | 495 |
| BisI | GCNGC | 1 cut(s) | 903 |
| BlpI | GCTNAGC | 2 cut(s) | 675, 869 |
| BlsI | GCNGC | 1 cut(s) | 904 |
| Bme1390I | CCNGG | 4 cut(s) | 366, 379, 596, 747 |
| Bme18I | GGWCC | 2 cut(s) | 112, 427 |
| BmeT110I | CYCGRG | 1 cut(s) | 387 |
| BmgT120I | GGNCC | 2 cut(s) | 112, 427 |
| BmrFI | CCNGG | 4 cut(s) | 366, 379, 596, 747 |
| BmrI | ACTGGG | 2 cut(s) | 4, 223 |
| BmsI | GCATC | 1 cut(s) | 970 |
| BmuI | ACTGGG | 2 cut(s) | 4, 223 |
| BpiI | GAAGAC | 1 cut(s) | 567 |
| BpmI | CTGGAG | 3 cut(s) | 227, 329, 729 |
| Bpu10I | CCTNAGC | 1 cut(s) | 590 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 675, 869 |
| BpuMI | CCSGG | 1 cut(s) | 596 |
| BsaAI | YACGTR | 1 cut(s) | 156 |
| BsaI | GGTCTC | 2 cut(s) | 223, 358 |
| BsaJI | CCNNGG | 3 cut(s) | 183, 364, 378 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 203, 233, 245, 251, 275, 281 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 380, 594, 595, 1030 |
| Bse118I | RCCGGY | 1 cut(s) | 70 |
| Bse1I | ACTGG | 2 cut(s) | 10, 218 |
| Bse21I | CCTNAGG | 1 cut(s) | 348 |
| Bse3DI | GCAATG | 1 cut(s) | 758 |
| BseBI | CCWGG | 3 cut(s) | 366, 379, 747 |
| BseDI | CCNNGG | 3 cut(s) | 183, 364, 378 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 380, 594, 595, 1030 |
| BseMI | GCAATG | 1 cut(s) | 758 |
| BseMII | CTCAG | 5 cut(s) | 362, 555, 604, 644, 707 |
| BseNI | ACTGG | 2 cut(s) | 10, 218 |
| BseRI | GAGGAG | 4 cut(s) | 211, 214, 269, 326 |
| BseXI | GCAGC | 1 cut(s) | 914 |
| BseYI | CCCAGC | 1 cut(s) | 232 |
| Bsh1236I | CGCG | 1 cut(s) | 688 |
| BshFI | GGCC | 2 cut(s) | 202, 346 |
| BsiHKAI | GWGCWC | 1 cut(s) | 318 |
| BsiHKCI | CYCGRG | 1 cut(s) | 387 |
| BsiSI | CCGG | 2 cut(s) | 71, 595 |
| BslFI | GGGAC | 2 cut(s) | 144, 155 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 380, 594, 595, 1030 |
| BsmAI | GTCTC | 3 cut(s) | 223, 358, 633 |
| BsmBI | CGTCTC | 1 cut(s) | 633 |
| BsmFI | GGGAC | 2 cut(s) | 144, 155 |
| BsnI | GGCC | 2 cut(s) | 202, 346 |
| Bso31I | GGTCTC | 2 cut(s) | 223, 358 |
| BsoBI | CYCGRG | 1 cut(s) | 387 |
| Bsp1286I | GDGCHC | 1 cut(s) | 318 |
| Bsp143I | GATC | 3 cut(s) | 163, 495, 542 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 675, 869 |
| BspACI | CCGC | 1 cut(s) | 103 |
| BspANI | GGCC | 2 cut(s) | 202, 346 |
| BspCNI | CTCAG | 5 cut(s) | 361, 556, 603, 643, 706 |
| BspFNI | CGCG | 1 cut(s) | 688 |
| BspHI | TCATGA | 1 cut(s) | 477 |
| BspPI | GGATC | 1 cut(s) | 550 |
| BspQI | GCTCTTC | 1 cut(s) | 243 |
| BspTNI | GGTCTC | 2 cut(s) | 223, 358 |
| BsrBI | CCGCTC | 1 cut(s) | 103 |
| BsrDI | GCAATG | 1 cut(s) | 758 |
| BsrFI | RCCGGY | 1 cut(s) | 70 |
| BsrI | ACTGG | 2 cut(s) | 10, 218 |
| BssAI | RCCGGY | 1 cut(s) | 70 |
| BssECI | CCNNGG | 3 cut(s) | 183, 364, 378 |
| BssMI | GATC | 3 cut(s) | 163, 495, 542 |
| BssT1I | CCWWGG | 1 cut(s) | 183 |
| Bst2UI | CCWGG | 3 cut(s) | 366, 379, 747 |
| Bst4CI | ACNGT | 6 cut(s) | 286, 336, 773, 811, 916, 1050 |
| Bst6I | CTCTTC | 1 cut(s) | 243 |
| BstBAI | YACGTR | 1 cut(s) | 156 |
| BstC8I | GCNNGC | 3 cut(s) | 28, 204, 208 |
| BstDEI | CTNAG | 7 cut(s) | 348, 564, 590, 630, 675, 693, 869 |
| BstFNI | CGCG | 1 cut(s) | 688 |
| BstKTI | GATC | 3 cut(s) | 166, 498, 545 |
| BstMAI | GTCTC | 3 cut(s) | 223, 358, 633 |
| BstMBI | GATC | 3 cut(s) | 163, 495, 542 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 132, 297, 685 |
| BstNI | CCWGG | 3 cut(s) | 366, 379, 747 |
| BstSCI | CCNGG | 4 cut(s) | 364, 377, 594, 745 |
| BstSFI | CTRYAG | 3 cut(s) | 332, 406, 1049 |
| BstUI | CGCG | 1 cut(s) | 688 |
| BstV1I | GCAGC | 1 cut(s) | 914 |
| BstV2I | GAAGAC | 1 cut(s) | 567 |
| BstX2I | RGATCY | 2 cut(s) | 495, 542 |
| BstYI | RGATCY | 2 cut(s) | 495, 542 |
| Bsu36I | CCTNAGG | 1 cut(s) | 348 |
| BsuRI | GGCC | 2 cut(s) | 202, 346 |
| BtsIMutI | CAGTG | 3 cut(s) | 282, 301, 1046 |
| Cac8I | GCNNGC | 3 cut(s) | 28, 204, 208 |
| CaiI | CAGNNNCTG | 1 cut(s) | 563 |
| CciI | TCATGA | 1 cut(s) | 477 |
| Cfr10I | RCCGGY | 1 cut(s) | 70 |
| Cfr13I | GGNCC | 2 cut(s) | 112, 427 |
| CseI | GACGC | 1 cut(s) | 101 |
| Csp6I | GTAC | 4 cut(s) | 13, 384, 639, 690 |
| CviAII | CATG | 6 cut(s) | 357, 478, 571, 619, 864, 1025 |
| CviQI | GTAC | 4 cut(s) | 13, 384, 639, 690 |
| DdeI | CTNAG | 7 cut(s) | 348, 564, 590, 630, 675, 693, 869 |
| DpnI | GATC | 3 cut(s) | 165, 497, 544 |
| DpnII | GATC | 3 cut(s) | 163, 495, 542 |
| DraIII | CACNNNGTG | 1 cut(s) | 288 |
| EaeI | YGGCCR | 1 cut(s) | 200 |
| Eam1104I | CTCTTC | 1 cut(s) | 243 |
| EarI | CTCTTC | 1 cut(s) | 243 |
| Eco130I | CCWWGG | 1 cut(s) | 183 |
| Eco31I | GGTCTC | 2 cut(s) | 223, 358 |
| Eco47I | GGWCC | 2 cut(s) | 112, 427 |
| Eco57I | CTGAAG | 1 cut(s) | 277 |
| Eco72I | CACGTG | 1 cut(s) | 156 |
| Eco81I | CCTNAGG | 1 cut(s) | 348 |
| Eco88I | CYCGRG | 1 cut(s) | 387 |
| EcoRI | GAATTC | 1 cut(s) | 481 |
| EcoRII | CCWGG | 3 cut(s) | 364, 377, 745 |
| EcoT14I | CCWWGG | 1 cut(s) | 183 |
| ErhI | CCWWGG | 1 cut(s) | 183 |
| Esp3I | CGTCTC | 1 cut(s) | 633 |
| FaeI | CATG | 6 cut(s) | 360, 481, 574, 622, 867, 1028 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 482, 514 |
| FaqI | GGGAC | 2 cut(s) | 144, 155 |
| FatI | CATG | 6 cut(s) | 356, 477, 570, 618, 863, 1024 |
| Fnu4HI | GCNGC | 1 cut(s) | 903 |
| Fsp4HI | GCNGC | 1 cut(s) | 903 |
| FspBI | CTAG | 2 cut(s) | 96, 852 |
| GluI | GCNGC | 1 cut(s) | 903 |
| GsaI | CCCAGC | 1 cut(s) | 236 |
| GsuI | CTGGAG | 3 cut(s) | 227, 329, 729 |
| HaeIII | GGCC | 2 cut(s) | 202, 346 |
| HapII | CCGG | 2 cut(s) | 71, 595 |
| HgaI | GACGC | 1 cut(s) | 101 |
| Hin1II | CATG | 6 cut(s) | 360, 481, 574, 622, 867, 1028 |
| HincII | GTYRAC | 1 cut(s) | 1002 |
| HindII | GTYRAC | 1 cut(s) | 1002 |
| HindIII | AAGCTT | 1 cut(s) | 658 |
| HinfI | GANTC | 2 cut(s) | 474, 560 |
| HpaII | CCGG | 2 cut(s) | 71, 595 |
| HphI | GGTGA | 7 cut(s) | 85, 645, 745, 767, 850, 872, 1049 |
| Hpy166II | GTNNAC | 2 cut(s) | 253, 1002 |
| Hpy188I | TCNGA | 6 cut(s) | 191, 271, 547, 565, 633, 817 |
| Hpy188III | TCNNGA | 7 cut(s) | 161, 254, 308, 430, 478, 695, 721 |
| Hpy8I | GTNNAC | 2 cut(s) | 253, 1002 |
| Hpy99I | CGWCG | 2 cut(s) | 95, 201 |
| HpyAV | CCTTC | 2 cut(s) | 484, 997 |
| HpyCH4III | ACNGT | 6 cut(s) | 286, 336, 773, 811, 916, 1050 |
| HpyCH4IV | ACGT | 1 cut(s) | 155 |
| HpyCH4V | TGCA | 2 cut(s) | 210, 360 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 132, 297, 685 |
| HpyF3I | CTNAG | 7 cut(s) | 348, 564, 590, 630, 675, 693, 869 |
| HpySE526I | ACGT | 1 cut(s) | 155 |
| Hsp92II | CATG | 6 cut(s) | 360, 481, 574, 622, 867, 1028 |
| Kzo9I | GATC | 3 cut(s) | 163, 495, 542 |
| LguI | GCTCTTC | 1 cut(s) | 243 |
| LmnI | GCTCC | 2 cut(s) | 155, 313 |
| Lsp1109I | GCAGC | 1 cut(s) | 914 |
| LweI | GCATC | 1 cut(s) | 970 |
| MaeI | CTAG | 2 cut(s) | 96, 852 |
| MaeII | ACGT | 1 cut(s) | 155 |
| MaeIII | GTNAC | 2 cut(s) | 767, 773 |
| MalI | GATC | 3 cut(s) | 165, 497, 544 |
| MbiI | CCGCTC | 1 cut(s) | 103 |
| MboI | GATC | 3 cut(s) | 163, 495, 542 |
| MboII | GAAGA | 4 cut(s) | 121, 230, 490, 567 |
| MflI | RGATCY | 2 cut(s) | 495, 542 |
| MhlI | GDGCHC | 1 cut(s) | 318 |
| MluCI | AATT | 3 cut(s) | 434, 481, 549 |
| MlyI | GAGTC | 1 cut(s) | 569 |
| MseI | TTAA | 2 cut(s) | 44, 662 |
| MspI | CCGG | 2 cut(s) | 71, 595 |
| MspR9I | CCNGG | 4 cut(s) | 366, 379, 596, 747 |
| MvaI | CCWGG | 3 cut(s) | 366, 379, 747 |
| MvnI | CGCG | 1 cut(s) | 688 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 132, 297, 685 |
| NciI | CCSGG | 1 cut(s) | 596 |
| NdeII | GATC | 3 cut(s) | 163, 495, 542 |
| NlaIII | CATG | 6 cut(s) | 360, 481, 574, 622, 867, 1028 |
| NmeAIII | GCCGAG | 1 cut(s) | 789 |
| NmuCI | GTSAC | 2 cut(s) | 767, 773 |
| PaeR7I | CTCGAG | 1 cut(s) | 387 |
| PagI | TCATGA | 1 cut(s) | 477 |
| PciSI | GCTCTTC | 1 cut(s) | 243 |
| PfeI | GAWTC | 1 cut(s) | 474 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1030 |
| PkrI | GCNGC | 1 cut(s) | 904 |
| PleI | GAGTC | 1 cut(s) | 568 |
| PmaCI | CACGTG | 1 cut(s) | 156 |
| PmlI | CACGTG | 1 cut(s) | 156 |
| PpsI | GAGTC | 1 cut(s) | 568 |
| Ppu21I | YACGTR | 1 cut(s) | 156 |
| Psp6I | CCWGG | 3 cut(s) | 364, 377, 745 |
| PspCI | CACGTG | 1 cut(s) | 156 |
| PspFI | CCCAGC | 1 cut(s) | 232 |
| PspGI | CCWGG | 3 cut(s) | 364, 377, 745 |
| PspPI | GGNCC | 2 cut(s) | 112, 427 |
| PspXI | VCTCGAGB | 1 cut(s) | 387 |
| PstNI | CAGNNNCTG | 1 cut(s) | 563 |
| PsuI | RGATCY | 2 cut(s) | 495, 542 |
| RsaI | GTAC | 4 cut(s) | 14, 385, 640, 691 |
| RsaNI | GTAC | 4 cut(s) | 13, 384, 639, 690 |
| SapI | GCTCTTC | 1 cut(s) | 243 |
| SaqAI | TTAA | 2 cut(s) | 44, 662 |
| SatI | GCNGC | 1 cut(s) | 903 |
| Sau3AI | GATC | 3 cut(s) | 163, 495, 542 |
| Sau96I | GGNCC | 2 cut(s) | 112, 427 |
| SchI | GAGTC | 1 cut(s) | 569 |
| ScrFI | CCNGG | 4 cut(s) | 366, 379, 596, 747 |
| SduI | GDGCHC | 1 cut(s) | 318 |
| SfaNI | GCATC | 1 cut(s) | 970 |
| SfcI | CTRYAG | 3 cut(s) | 332, 406, 1049 |
| Sfr274I | CTCGAG | 1 cut(s) | 387 |
| SinI | GGWCC | 2 cut(s) | 112, 427 |
| SlaI | CTCGAG | 1 cut(s) | 387 |
| SmlI | CTYRAG | 1 cut(s) | 387 |
| SmoI | CTYRAG | 1 cut(s) | 387 |
| Sse9I | AATT | 3 cut(s) | 434, 481, 549 |
| SsiI | CCGC | 1 cut(s) | 103 |
| SspI | AATATT | 2 cut(s) | 532, 709 |
| SspMI | CTAG | 2 cut(s) | 96, 852 |
| StyD4I | CCNGG | 4 cut(s) | 364, 377, 594, 745 |
| StyI | CCWWGG | 1 cut(s) | 183 |
| TaaI | ACNGT | 6 cut(s) | 286, 336, 773, 811, 916, 1050 |
| TaiI | ACGT | 1 cut(s) | 158 |
| TaqI | TCGA | 3 cut(s) | 196, 388, 459 |
| TasI | AATT | 3 cut(s) | 434, 481, 549 |
| TatI | WGTACW | 1 cut(s) | 638 |
| TfiI | GAWTC | 1 cut(s) | 474 |
| Tru1I | TTAA | 2 cut(s) | 44, 662 |
| Tru9I | TTAA | 2 cut(s) | 44, 662 |
| TscAI | CASTG | 3 cut(s) | 289, 301, 1053 |
| TseFI | GTSAC | 2 cut(s) | 767, 773 |
| TseI | GCWGC | 1 cut(s) | 902 |
| Tsp45I | GTSAC | 2 cut(s) | 767, 773 |
| TspDTI | ATGAA | 5 cut(s) | 466, 494, 559, 701, 1041 |
| TspGWI | ACGGA | 1 cut(s) | 615 |
| TspRI | CASTG | 3 cut(s) | 289, 301, 1053 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1030 |
| VpaK11BI | GGWCC | 2 cut(s) | 112, 427 |
| XapI | RAATTY | 3 cut(s) | 434, 481, 549 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 210 |
| XhoI | CTCGAG | 1 cut(s) | 387 |
| XspI | CTAG | 2 cut(s) | 96, 852 |