starch biosynthetic process
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27070 |
| fragaria_vesca | FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 |
| malus_domestica | MD13G1079900.v1.1 MD16G1079800.v1.1 |
| prunus_persica | Prupe.1G266900_v2.0.a1 |
| pyrus_communis | pycom13g06940 pycom16g06890 |
| rosa_chinensis | RchiOBHm_Chr4g0440791 |
| rosa_laevigata | RLG00000006153 |
| rosa_multiflora | Rmu_sc0000424.1_g000007 Rmu_sc0000780.1_g000019 Rmu_sc0022158.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00381550 |
| rosa_rugosa | Rorug04G0327900 Rorug04G0328000 |
| rosa_samantha | Rh4AG379800 Rh4BG392700 Rh4CG407500 Rh4DG386500 |
| rosa_wichuraiana | Rw4G032700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 848 |
| Acc36I | ACCTGC | 1 cut(s) | 775 |
| AciI | CCGC | 4 cut(s) | 18, 111, 165, 1549 |
| AclWI | GGATC | 2 cut(s) | 1435, 1550 |
| AcoI | YGGCCR | 1 cut(s) | 1394 |
| AcsI | RAATTY | 6 cut(s) | 58, 646, 939, 1039, 1399, 1526 |
| AcuI | CTGAAG | 2 cut(s) | 152, 498 |
| AcvI | CACGTG | 1 cut(s) | 1259 |
| AfaI | GTAC | 4 cut(s) | 703, 1091, 1378, 1474 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 117 |
| AflIII | ACRYGT | 1 cut(s) | 1256 |
| AjnI | CCWGG | 3 cut(s) | 307, 1202, 1236 |
| AleI | CACNNNNGTG | 1 cut(s) | 1581 |
| Alw21I | GWGCWC | 4 cut(s) | 299, 430, 1107, 1419 |
| Alw26I | GTCTC | 2 cut(s) | 43, 804 |
| AlwI | GGATC | 2 cut(s) | 1435, 1550 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 130, 743 |
| AoxI | GGCC | 3 cut(s) | 745, 962, 1394 |
| ApeKI | GCWGC | 9 cut(s) | 20, 121, 124, 554, 584, 759, 932, 1148, 1307 |
| ApoI | RAATTY | 6 cut(s) | 58, 646, 939, 1039, 1399, 1526 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 990 |
| AspLEI | GCGC | 2 cut(s) | 1312, 1566 |
| AspS9I | GGNCC | 2 cut(s) | 962, 1443 |
| AsuC2I | CCSGG | 1 cut(s) | 1509 |
| AsuHPI | GGTGA | 4 cut(s) | 55, 253, 855, 1553 |
| AvaII | GGWCC | 1 cut(s) | 1443 |
| AxyI | CCTNAGG | 1 cut(s) | 1496 |
| BalI | TGGCCA | 1 cut(s) | 1396 |
| BanII | GRGCYC | 3 cut(s) | 299, 430, 1107 |
| BbrPI | CACGTG | 1 cut(s) | 1259 |
| BbsI | GAAGAC | 1 cut(s) | 687 |
| Bbv12I | GWGCWC | 4 cut(s) | 299, 430, 1107, 1419 |
| BbvI | GCAGC | 9 cut(s) | 7, 133, 136, 566, 571, 771, 919, 1135, 1319 |
| BccI | CCATC | 4 cut(s) | 1282, 1430, 1453, 1532 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 13, 47, 63, 97, 467, 501, 543, 577 |
| BciT130I | CCWGG | 3 cut(s) | 309, 1204, 1238 |
| BciVI | GTATCC | 1 cut(s) | 1515 |
| BclI | TGATCA | 3 cut(s) | 1021, 1078, 1605 |
| BcnI | CCSGG | 1 cut(s) | 1509 |
| BcoDI | GTCTC | 2 cut(s) | 43, 804 |
| BfaI | CTAG | 2 cut(s) | 578, 854 |
| BfuAI | ACCTGC | 1 cut(s) | 775 |
| BfuI | GTATCC | 1 cut(s) | 1515 |
| BglII | AGATCT | 2 cut(s) | 830, 1136 |
| BisI | GCNGC | 9 cut(s) | 21, 122, 125, 555, 585, 760, 933, 1149, 1308 |
| BlsI | GCNGC | 9 cut(s) | 22, 123, 126, 556, 586, 761, 934, 1150, 1309 |
| BmcAI | AGTACT | 1 cut(s) | 703 |
| Bme1390I | CCNGG | 4 cut(s) | 309, 1204, 1238, 1509 |
| Bme18I | GGWCC | 1 cut(s) | 1443 |
| BmgT120I | GGNCC | 2 cut(s) | 962, 1443 |
| BmrFI | CCNGG | 4 cut(s) | 309, 1204, 1238, 1509 |
| BmsI | GCATC | 6 cut(s) | 355, 721, 779, 903, 1189, 1339 |
| BpiI | GAAGAC | 1 cut(s) | 687 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1094, 1126 |
| BpuEI | CTTGAG | 2 cut(s) | 414, 534 |
| BpuMI | CCSGG | 1 cut(s) | 1509 |
| Bsa29I | ATCGAT | 1 cut(s) | 628 |
| BsaAI | YACGTR | 2 cut(s) | 1076, 1259 |
| BsaJI | CCNNGG | 4 cut(s) | 264, 308, 1203, 1236 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 117 |
| Bse1I | ACTGG | 3 cut(s) | 610, 1299, 1470 |
| Bse21I | CCTNAGG | 1 cut(s) | 1496 |
| Bse3DI | GCAATG | 1 cut(s) | 1419 |
| BseBI | CCWGG | 3 cut(s) | 309, 1204, 1238 |
| BseCI | ATCGAT | 1 cut(s) | 628 |
| BseDI | CCNNGG | 4 cut(s) | 264, 308, 1203, 1236 |
| BseGI | GGATG | 4 cut(s) | 173, 604, 894, 976 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseMI | GCAATG | 1 cut(s) | 1419 |
| BseMII | CTCAG | 2 cut(s) | 264, 1422 |
| BseNI | ACTGG | 3 cut(s) | 610, 1299, 1470 |
| BseRI | GAGGAG | 3 cut(s) | 1099, 1162, 1340 |
| BseXI | GCAGC | 9 cut(s) | 7, 133, 136, 566, 571, 771, 919, 1135, 1319 |
| BsgI | GTGCAG | 1 cut(s) | 1098 |
| BshFI | GGCC | 3 cut(s) | 747, 964, 1396 |
| BshVI | ATCGAT | 1 cut(s) | 628 |
| BsiHKAI | GWGCWC | 4 cut(s) | 299, 430, 1107, 1419 |
| BsiSI | CCGG | 1 cut(s) | 1508 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BsmAI | GTCTC | 2 cut(s) | 43, 804 |
| BsmBI | CGTCTC | 1 cut(s) | 43 |
| BsnI | GGCC | 3 cut(s) | 747, 964, 1396 |
| Bsp1286I | GDGCHC | 4 cut(s) | 299, 430, 1107, 1419 |
| BspACI | CCGC | 4 cut(s) | 18, 111, 165, 1549 |
| BspANI | GGCC | 3 cut(s) | 747, 964, 1396 |
| BspCNI | CTCAG | 2 cut(s) | 265, 1421 |
| BspDI | ATCGAT | 1 cut(s) | 628 |
| BspHI | TCATGA | 2 cut(s) | 288, 1162 |
| BspMI | ACCTGC | 1 cut(s) | 775 |
| BspPI | GGATC | 2 cut(s) | 1435, 1550 |
| BspQI | GCTCTTC | 1 cut(s) | 287 |
| BsrDI | GCAATG | 1 cut(s) | 1419 |
| BsrI | ACTGG | 3 cut(s) | 610, 1299, 1470 |
| BssECI | CCNNGG | 4 cut(s) | 264, 308, 1203, 1236 |
| BssT1I | CCWWGG | 1 cut(s) | 264 |
| Bst2UI | CCWGG | 3 cut(s) | 309, 1204, 1238 |
| Bst4CI | ACNGT | 3 cut(s) | 739, 1321, 1583 |
| Bst6I | CTCTTC | 2 cut(s) | 287, 1047 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1304 |
| BstBAI | YACGTR | 2 cut(s) | 1076, 1259 |
| BstC8I | GCNNGC | 2 cut(s) | 745, 1233 |
| BstDEI | CTNAG | 3 cut(s) | 273, 1408, 1496 |
| BstF5I | GGATG | 4 cut(s) | 173, 604, 894, 976 |
| BstHHI | GCGC | 2 cut(s) | 1312, 1566 |
| BstMAI | GTCTC | 2 cut(s) | 43, 804 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 40, 740, 1268, 1304, 1358 |
| BstNI | CCWGG | 3 cut(s) | 309, 1204, 1238 |
| BstNSI | RCATGY | 1 cut(s) | 1235 |
| BstSCI | CCNGG | 4 cut(s) | 307, 1202, 1236, 1507 |
| BstV1I | GCAGC | 9 cut(s) | 7, 133, 136, 566, 571, 771, 919, 1135, 1319 |
| BstV2I | GAAGAC | 1 cut(s) | 687 |
| BstX2I | RGATCY | 2 cut(s) | 830, 1136 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 879, 905 |
| BstYI | RGATCY | 2 cut(s) | 830, 1136 |
| Bsu15I | ATCGAT | 1 cut(s) | 628 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1496 |
| BsuI | GTATCC | 1 cut(s) | 1515 |
| BsuRI | GGCC | 3 cut(s) | 747, 964, 1396 |
| BsuTUI | ATCGAT | 1 cut(s) | 628 |
| BtgZI | GCGATG | 2 cut(s) | 152, 244 |
| BtsCI | GGATG | 4 cut(s) | 173, 604, 894, 976 |
| BtsI | GCAGTG | 2 cut(s) | 455, 490 |
| BtsIMutI | CAGTG | 4 cut(s) | 455, 490, 1292, 1588 |
| BveI | ACCTGC | 1 cut(s) | 775 |
| Cac8I | GCNNGC | 2 cut(s) | 745, 1233 |
| CaiI | CAGNNNCTG | 2 cut(s) | 130, 743 |
| CciI | TCATGA | 2 cut(s) | 288, 1162 |
| CfoI | GCGC | 2 cut(s) | 1312, 1566 |
| Cfr13I | GGNCC | 2 cut(s) | 962, 1443 |
| ClaI | ATCGAT | 1 cut(s) | 628 |
| CseI | GACGC | 2 cut(s) | 116, 546 |
| Csp6I | GTAC | 4 cut(s) | 702, 1090, 1377, 1473 |
| CviAII | CATG | 4 cut(s) | 289, 520, 1163, 1232 |
| CviQI | GTAC | 4 cut(s) | 702, 1090, 1377, 1473 |
| DdeI | CTNAG | 3 cut(s) | 273, 1408, 1496 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 848 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 848 |
| EaeI | YGGCCR | 1 cut(s) | 1394 |
| Eam1104I | CTCTTC | 2 cut(s) | 287, 1047 |
| EarI | CTCTTC | 2 cut(s) | 287, 1047 |
| EciI | GGCGGA | 1 cut(s) | 1564 |
| Ecl136II | GAGCTC | 3 cut(s) | 297, 428, 1105 |
| Eco130I | CCWWGG | 1 cut(s) | 264 |
| Eco24I | GRGCYC | 3 cut(s) | 299, 430, 1107 |
| Eco47I | GGWCC | 1 cut(s) | 1443 |
| Eco53kI | GAGCTC | 3 cut(s) | 297, 428, 1105 |
| Eco57I | CTGAAG | 2 cut(s) | 152, 498 |
| Eco72I | CACGTG | 1 cut(s) | 1259 |
| Eco81I | CCTNAGG | 1 cut(s) | 1496 |
| EcoICRI | GAGCTC | 3 cut(s) | 297, 428, 1105 |
| EcoRI | GAATTC | 1 cut(s) | 1039 |
| EcoRII | CCWGG | 3 cut(s) | 307, 1202, 1236 |
| EcoT14I | CCWWGG | 1 cut(s) | 264 |
| EcoT22I | ATGCAT | 1 cut(s) | 1233 |
| EcoT38I | GRGCYC | 3 cut(s) | 299, 430, 1107 |
| ErhI | CCWWGG | 1 cut(s) | 264 |
| Esp3I | CGTCTC | 1 cut(s) | 43 |
| FaeI | CATG | 4 cut(s) | 292, 523, 1166, 1235 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 780, 812 |
| FatI | CATG | 4 cut(s) | 288, 519, 1162, 1231 |
| FauNDI | CATATG | 1 cut(s) | 1432 |
| FbaI | TGATCA | 3 cut(s) | 1021, 1078, 1605 |
| Fnu4HI | GCNGC | 9 cut(s) | 21, 122, 125, 555, 585, 760, 933, 1149, 1308 |
| FokI | GGATG | 4 cut(s) | 180, 611, 881, 983 |
| FriOI | GRGCYC | 3 cut(s) | 299, 430, 1107 |
| Fsp4HI | GCNGC | 9 cut(s) | 21, 122, 125, 555, 585, 760, 933, 1149, 1308 |
| FspBI | CTAG | 2 cut(s) | 578, 854 |
| GlaI | GCGC | 2 cut(s) | 1311, 1565 |
| GluI | GCNGC | 9 cut(s) | 21, 122, 125, 555, 585, 760, 933, 1149, 1308 |
| HaeIII | GGCC | 3 cut(s) | 747, 964, 1396 |
| HapII | CCGG | 1 cut(s) | 1508 |
| HgaI | GACGC | 2 cut(s) | 116, 546 |
| HhaI | GCGC | 2 cut(s) | 1312, 1566 |
| Hin1II | CATG | 4 cut(s) | 292, 523, 1166, 1235 |
| Hin6I | GCGC | 2 cut(s) | 1310, 1564 |
| HinP1I | GCGC | 2 cut(s) | 1310, 1564 |
| HindIII | AAGCTT | 1 cut(s) | 1190 |
| HpaII | CCGG | 1 cut(s) | 1508 |
| HphI | GGTGA | 4 cut(s) | 55, 253, 855, 1553 |
| Hpy166II | GTNNAC | 1 cut(s) | 1576 |
| Hpy8I | GTNNAC | 1 cut(s) | 1576 |
| Hpy99I | CGWCG | 3 cut(s) | 98, 562, 565 |
| HpyAV | CCTTC | 8 cut(s) | 61, 90, 127, 322, 416, 467, 1274, 1332 |
| HpyCH4III | ACNGT | 3 cut(s) | 739, 1321, 1583 |
| HpyCH4IV | ACGT | 5 cut(s) | 93, 653, 1075, 1258, 1613 |
| HpyCH4V | TGCA | 5 cut(s) | 770, 1115, 1231, 1262, 1307 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 40, 740, 1268, 1304, 1358 |
| HpyF3I | CTNAG | 3 cut(s) | 273, 1408, 1496 |
| HpySE526I | ACGT | 5 cut(s) | 93, 653, 1075, 1258, 1613 |
| Hsp92II | CATG | 4 cut(s) | 292, 523, 1166, 1235 |
| HspAI | GCGC | 2 cut(s) | 1310, 1564 |
| Ksp22I | TGATCA | 3 cut(s) | 1021, 1078, 1605 |
| LguI | GCTCTTC | 1 cut(s) | 287 |
| LmnI | GCTCC | 6 cut(s) | 206, 302, 331, 425, 891, 1175 |
| Lsp1109I | GCAGC | 9 cut(s) | 7, 133, 136, 566, 571, 771, 919, 1135, 1319 |
| LweI | GCATC | 6 cut(s) | 355, 721, 779, 903, 1189, 1339 |
| MaeI | CTAG | 2 cut(s) | 578, 854 |
| MaeII | ACGT | 5 cut(s) | 93, 653, 1075, 1258, 1613 |
| MaeIII | GTNAC | 1 cut(s) | 1061 |
| MflI | RGATCY | 2 cut(s) | 830, 1136 |
| MhlI | GDGCHC | 4 cut(s) | 299, 430, 1107, 1419 |
| MlsI | TGGCCA | 1 cut(s) | 1396 |
| MluNI | TGGCCA | 1 cut(s) | 1396 |
| MlyI | GAGTC | 1 cut(s) | 854 |
| MmeI | TCCRAC | 1 cut(s) | 1421 |
| Mox20I | TGGCCA | 1 cut(s) | 1396 |
| Mph1103I | ATGCAT | 1 cut(s) | 1233 |
| MroXI | GAANNNNTTC | 1 cut(s) | 990 |
| MscI | TGGCCA | 1 cut(s) | 1396 |
| MseI | TTAA | 6 cut(s) | 99, 198, 663, 798, 998, 1086 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1581 |
| Msp20I | TGGCCA | 1 cut(s) | 1396 |
| MspA1I | CMGCKG | 1 cut(s) | 20 |
| MspI | CCGG | 1 cut(s) | 1508 |
| MspR9I | CCNGG | 4 cut(s) | 309, 1204, 1238, 1509 |
| MvaI | CCWGG | 3 cut(s) | 309, 1204, 1238 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 40, 740, 1268, 1304, 1358 |
| NciI | CCSGG | 1 cut(s) | 1509 |
| NdeI | CATATG | 1 cut(s) | 1432 |
| NlaIII | CATG | 4 cut(s) | 292, 523, 1166, 1235 |
| NmuCI | GTSAC | 1 cut(s) | 1061 |
| NsiI | ATGCAT | 1 cut(s) | 1233 |
| NspI | RCATGY | 1 cut(s) | 1235 |
| OliI | CACNNNNGTG | 1 cut(s) | 1581 |
| PaeI | GCATGC | 1 cut(s) | 1235 |
| PagI | TCATGA | 2 cut(s) | 288, 1162 |
| PciSI | GCTCTTC | 1 cut(s) | 287 |
| PdmI | GAANNNNTTC | 1 cut(s) | 990 |
| PfeI | GAWTC | 9 cut(s) | 85, 341, 455, 542, 609, 625, 803, 1097, 1479 |
| PkrI | GCNGC | 9 cut(s) | 22, 123, 126, 556, 586, 761, 934, 1150, 1309 |
| PleI | GAGTC | 1 cut(s) | 854 |
| PmaCI | CACGTG | 1 cut(s) | 1259 |
| PmlI | CACGTG | 1 cut(s) | 1259 |
| PpsI | GAGTC | 1 cut(s) | 854 |
| Ppu21I | YACGTR | 2 cut(s) | 1076, 1259 |
| Psp124BI | GAGCTC | 3 cut(s) | 299, 430, 1107 |
| Psp6I | CCWGG | 3 cut(s) | 307, 1202, 1236 |
| PspCI | CACGTG | 1 cut(s) | 1259 |
| PspGI | CCWGG | 3 cut(s) | 307, 1202, 1236 |
| PspPI | GGNCC | 2 cut(s) | 962, 1443 |
| PstNI | CAGNNNCTG | 2 cut(s) | 130, 743 |
| PsuI | RGATCY | 2 cut(s) | 830, 1136 |
| RsaI | GTAC | 4 cut(s) | 703, 1091, 1378, 1474 |
| RsaNI | GTAC | 4 cut(s) | 702, 1090, 1377, 1473 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1581 |
| SacI | GAGCTC | 3 cut(s) | 299, 430, 1107 |
| SapI | GCTCTTC | 1 cut(s) | 287 |
| SaqAI | TTAA | 6 cut(s) | 99, 198, 663, 798, 998, 1086 |
| SatI | GCNGC | 9 cut(s) | 21, 122, 125, 555, 585, 760, 933, 1149, 1308 |
| Sau96I | GGNCC | 2 cut(s) | 962, 1443 |
| ScaI | AGTACT | 1 cut(s) | 703 |
| SchI | GAGTC | 1 cut(s) | 854 |
| ScrFI | CCNGG | 4 cut(s) | 309, 1204, 1238, 1509 |
| SduI | GDGCHC | 4 cut(s) | 299, 430, 1107, 1419 |
| SfaNI | GCATC | 6 cut(s) | 355, 721, 779, 903, 1189, 1339 |
| SinI | GGWCC | 1 cut(s) | 1443 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1581 |
| SmlI | CTYRAG | 2 cut(s) | 429, 549 |
| SmoI | CTYRAG | 2 cut(s) | 429, 549 |
| SphI | GCATGC | 1 cut(s) | 1235 |
| SsiI | CCGC | 4 cut(s) | 18, 111, 165, 1549 |
| SspI | AATATT | 2 cut(s) | 621, 990 |
| SspMI | CTAG | 2 cut(s) | 578, 854 |
| SstI | GAGCTC | 3 cut(s) | 299, 430, 1107 |
| StyD4I | CCNGG | 4 cut(s) | 307, 1202, 1236, 1507 |
| StyI | CCWWGG | 1 cut(s) | 264 |
| TaaI | ACNGT | 3 cut(s) | 739, 1321, 1583 |
| TaiI | ACGT | 5 cut(s) | 96, 656, 1078, 1261, 1616 |
| TaqI | TCGA | 6 cut(s) | 83, 458, 491, 612, 628, 1253 |
| TatI | WGTACW | 2 cut(s) | 701, 1472 |
| TfiI | GAWTC | 9 cut(s) | 85, 341, 455, 542, 609, 625, 803, 1097, 1479 |
| Tru1I | TTAA | 6 cut(s) | 99, 198, 663, 798, 998, 1086 |
| Tru9I | TTAA | 6 cut(s) | 99, 198, 663, 798, 998, 1086 |
| TscAI | CASTG | 4 cut(s) | 455, 490, 1299, 1588 |
| TseFI | GTSAC | 1 cut(s) | 1061 |
| TseI | GCWGC | 9 cut(s) | 20, 121, 124, 554, 584, 759, 932, 1148, 1307 |
| Tsp45I | GTSAC | 1 cut(s) | 1061 |
| TspDTI | ATGAA | 8 cut(s) | 277, 305, 1029, 1113, 1151, 1158, 1179, 1605 |
| TspRI | CASTG | 4 cut(s) | 455, 490, 1299, 1588 |
| VpaK11BI | GGWCC | 1 cut(s) | 1443 |
| XapI | RAATTY | 6 cut(s) | 58, 646, 939, 1039, 1399, 1526 |
| XceI | RCATGY | 1 cut(s) | 1235 |
| XmnI | GAANNNNTTC | 1 cut(s) | 990 |
| XspI | CTAG | 2 cut(s) | 578, 854 |
| ZrmI | AGTACT | 1 cut(s) | 703 |
| Zsp2I | ATGCAT | 1 cut(s) | 1233 |