Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0007960

Physical Location & Seq

Genomic Coordinates Reverse (-)

59784046 .. 59787764

Gene Structure 3719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G032700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGCTCGCCTTCACCCACTTCCATCTAGTCCCCGGTTTTTTTCCTCCGGTCCTCCACGTCACCAATTCGGCCGCCGGAATGAGGCGGGGACGTGTTCTTGGGCCGGCGAGGCTTAGGGTGGTGGGAGAAAGCAGGGTTTCTGTTGTTCTAGGGTTTTGGGAGGGGAGGAAAGAAGGGGGTTGTGGGTTTGTGAGGCGGTGTAGGGATTCGGATTTGGAAGGGGATTTTGCCCTGGAAGCTGAGATTTTGGAGTTCATGAAGGGCTCGGAGAAGCCTCGAGCTTTTCCGAGCAAGAGGGACTTGGTGGAGGCTGGGAGGTTGGATTTGGTCGACGCCATTGTGAGGGAAGGTGGTTGGCTTTCGCTGGGTTGGGATTCGGGGGATGAAGAAACAGCTCAAGATAGTGGCTTTAGGAATTGGGATGAAGGATATGACAACAGTGATTCCGATATGGTTTCTGATGATTCTTCTTCTTCTTCTTCTTCTGTAGTAGCGTCGTCGTCTGGTACATCACTAGAAGCTGCAACAACTGAGGTTGATACTGGAATCGAGGGTATATTGAACCGATTAGAGAAACAGAGAAATTTGACCCTTGGGTTTGTTTTGAGAGATAAAGAAGACAGTACTGGCCTCGCAAATAATGATAACAAACATGATCGGTGCCCTGAAACCTCAACTGATGCGACAGTTGGTGCAACAAGTAGAAGTATCAGACCTGCTTCATCAAACCCCACTAAAGCCATTCTTAGTGATTTGGGAGGCCCACATAATCATAGCAGATCTCTTTTAGATGCTGATGTTCAGAGAAACTCACCAAAGCCTGAAATGTGGAGAACTTGGAGCAGCCAAAGGGCTGGATCTTCAGATCTGGAATTTGAAGCTGGTGAAGTTTCTTATGATGAAATGGGAGGATCAAAGGGAGTTTTGCAAAATGAAATACTTCAAACGAAAGATGGTGCTAATGAACCGAATGGAAGGAATGATCTAGATTCTGAGGATGAAGTGATCAATTACAAACAAGTACGAATTCGCATGCAGCACCTTGAATCCGAGCTATCCTCTGTACTTCACTCATTGAGGTCTAAAACTAGTAATGTTGCACCAAAGGAGATGGGGGTGATTACTCCTGGTCATGAAAGCTCCTCTGATGATTTGCGGAAAGTCTCTGATGCTTGGGAGTTTCAAGAAAATGAAATTATGCATGCCCAGAACAAATTACGTTCAACACGTGCAAAGCTTGCTGTTTTAGAAGGAAAGATGGCGATGGCAATAATTGATGCGCAAAAGAAAGTGGAGGAGAAACAGAAGAGAGTTAATGATGCTCGTAGAGCCGTAAGGCTTCTCCGAACTGCTTTAATAGTTTGGACCAATCCAGCCTCAGAAGTGCTTTTAGCAGGATCATATGATGGTTGGGCTACCCAGAGAAAGATGGAGAGGTCGAGTACAGGAATCTTCTCTGTTAGCCTTAAGTTGTATCCCGGTAGATATGAGATCAAATTCATTGTTGATGGGGAATGGCGAATTGATCCCCTACGCCCAATTGTTCGCAACAACGGATTTGAAAATAATATACTGATTATAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0001871 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0006109 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010556 GO:0010581 GO:0010675 GO:0010962 GO:0016051 GO:0019222 GO:0019252 GO:0030246 GO:0030247 GO:0031323 GO:0031326 GO:0032881 GO:0032885 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060255 GO:0065007 GO:0070492 GO:0071704 GO:0080050 GO:0080090 GO:0097367 GO:1901576 GO:2000014 GO:2000026 GO:2000112 GO:2000241 GO:2000904 GO:2001066 GO:2001070 GO:2001071

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMPK1_CBM

Protein Analysis

528

Amino Acids

58.44

Weight (kDa)

5.45

Isoelectric Point (pI)

48.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMPK1_CBM	PF16561	452 - 527	2.2e-17	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27070
fragaria_vesca	FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100
malus_domestica	MD13G1079900.v1.1 MD16G1079800.v1.1
prunus_persica	Prupe.1G266900_v2.0.a1
pyrus_communis	pycom13g06940 pycom16g06890
rosa_chinensis	RchiOBHm_Chr4g0440791
rosa_laevigata	RLG00000006153
rosa_multiflora	Rmu_sc0000424.1_g000007 Rmu_sc0000780.1_g000019 Rmu_sc0022158.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381550
rosa_rugosa	Rorug04G0327900 Rorug04G0328000
rosa_samantha	Rh4AG379800 Rh4BG392700 Rh4CG407500 Rh4DG386500
rosa_wichuraiana	Rw4G032700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1580
Acc16I	TGCGCA	1 cut(s)	1281
Acc36I	ACCTGC	1 cut(s)	724
AccB1I	GGYRCC	1 cut(s)	660
AccI	GTMKAC	1 cut(s)	330
AciI	CCGC	4 cut(s)	72, 85, 196, 1156
AclWI	GGATC	4 cut(s)	865, 919, 1405, 1520
AcoI	YGGCCR	1 cut(s)	69
AcsI	RAATTY	4 cut(s)	583, 872, 1026, 1496
AcuI	CTGAAG	1 cut(s)	846
AcvI	CACGTG	1 cut(s)	1229
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	5 cut(s)	508, 625, 1023, 1065, 1444
AfiI	CCNNNNNNNGG	2 cut(s)	81, 342
AflII	CTTAAG	1 cut(s)	1466
AflIII	ACRYGT	2 cut(s)	91, 1226
AgsI	TTSAA	7 cut(s)	562, 878, 944, 1046, 1184, 1224, 1562
AhlI	ACTAGT	1 cut(s)	1088
AjiI	CACGTC	2 cut(s)	58, 92
AjnI	CCWGG	2 cut(s)	231, 1126
AluBI	AGCT	8 cut(s)	239, 281, 395, 521, 881, 1054, 1140, 1237
AluI	AGCT	8 cut(s)	239, 281, 395, 521, 881, 1054, 1140, 1237
Alw26I	GTCTC	1 cut(s)	1168
AlwI	GGATC	4 cut(s)	865, 919, 1405, 1520
Ama87I	CYCGRG	1 cut(s)	276
AoxI	GGCC	4 cut(s)	69, 101, 628, 760
ApeKI	GCWGC	3 cut(s)	521, 843, 1036
ApoI	RAATTY	4 cut(s)	583, 872, 1026, 1496
Asp700I	GAANNNNTTC	1 cut(s)	939
AspLEI	GCGC	1 cut(s)	1282
AspS9I	GGNCC	4 cut(s)	49, 101, 761, 1365
AsuC2I	CCSGG	2 cut(s)	33, 1479
AsuHPI	GGTGA	5 cut(s)	4, 52, 804, 896, 1129
AvaI	CYCGRG	1 cut(s)	276
AvaII	GGWCC	2 cut(s)	49, 1365
BaeGI	GKGCMC	1 cut(s)	665
BanI	GGYRCC	1 cut(s)	660
BanII	GRGCYC	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	1229
BbsI	GAAGAC	1 cut(s)	624
BbvI	GCAGC	3 cut(s)	508, 855, 1048
BccI	CCATC	8 cut(s)	30, 947, 1105, 1252, 1258, 1400, 1423, 1502
BceAI	ACGGC	1 cut(s)	1316
BciT130I	CCWGG	2 cut(s)	233, 1128
BciVI	GTATCC	1 cut(s)	1485
BclI	TGATCA	1 cut(s)	1005
BcnI	CCSGG	2 cut(s)	33, 1479
BcoDI	GTCTC	1 cut(s)	1168
BcuI	ACTAGT	1 cut(s)	1088
BfaI	CTAG	5 cut(s)	26, 149, 515, 986, 1089
BfmI	CTRYAG	1 cut(s)	486
BfrI	CTTAAG	1 cut(s)	1466
BfuAI	ACCTGC	1 cut(s)	724
BfuI	GTATCC	1 cut(s)	1485
BglI	GCCNNNNNGGC	1 cut(s)	109
BglII	AGATCT	2 cut(s)	779, 865
BisI	GCNGC	4 cut(s)	72, 522, 844, 1037
BlsI	GCNGC	4 cut(s)	73, 523, 845, 1038
BmcAI	AGTACT	1 cut(s)	625
Bme1390I	CCNGG	4 cut(s)	33, 233, 1128, 1479
Bme18I	GGWCC	2 cut(s)	49, 1365
BmeT110I	CYCGRG	1 cut(s)	276
BmgBI	CACGTC	2 cut(s)	58, 92
BmgT120I	GGNCC	4 cut(s)	49, 101, 761, 1365
BmiI	GGNNCC	1 cut(s)	662
BmrFI	CCNGG	4 cut(s)	33, 233, 1128, 1479
BmsI	GCATC	5 cut(s)	670, 781, 1159, 1267, 1309
BpiI	GAAGAC	1 cut(s)	624
BplI	GAGNNNNNCTC	2 cut(s)	1043, 1075
Bpu10I	CCTNAGC	1 cut(s)	113
BpuEI	CTTGAG	1 cut(s)	381
BpuMI	CCSGG	2 cut(s)	33, 1479
BsaAI	YACGTR	1 cut(s)	1229
BsaHI	GRCGYC	1 cut(s)	333
BsaJI	CCNNGG	3 cut(s)	31, 231, 592
BsaWI	WCCGGW	1 cut(s)	46
Bsc4I	CCNNNNNNNGG	2 cut(s)	81, 342
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	2 cut(s)	547, 631
BseBI	CCWGG	2 cut(s)	233, 1128
BseDI	CCNNGG	3 cut(s)	31, 231, 592
BseGI	GGATG	3 cut(s)	388, 427, 1003
BseLI	CCNNNNNNNGG	2 cut(s)	81, 342
BseMII	CTCAG	4 cut(s)	231, 522, 984, 1392
BseNI	ACTGG	2 cut(s)	547, 631
BseRI	GAGGAG	2 cut(s)	1132, 1310
BseSI	GKGCMC	1 cut(s)	665
BseX3I	CGGCCG	1 cut(s)	69
BseXI	GCAGC	3 cut(s)	508, 855, 1048
BseYI	CCCAGC	2 cut(s)	311, 364
Bsh1285I	CGRYCG	1 cut(s)	72
BshFI	GGCC	4 cut(s)	71, 103, 630, 762
BshNI	GGYRCC	1 cut(s)	660
BsiEI	CGRYCG	1 cut(s)	72
BsiHKCI	CYCGRG	1 cut(s)	276
BsiSI	CCGG	5 cut(s)	33, 47, 75, 104, 1479
BslFI	GGGAC	3 cut(s)	14, 102, 311
BslI	CCNNNNNNNGG	2 cut(s)	81, 342
BsmAI	GTCTC	1 cut(s)	1168
BsmFI	GGGAC	3 cut(s)	14, 102, 311
BsnI	GGCC	4 cut(s)	71, 103, 630, 762
BsoBI	CYCGRG	1 cut(s)	276
Bsp1286I	GDGCHC	2 cut(s)	266, 665
BspACI	CCGC	4 cut(s)	72, 85, 196, 1156
BspANI	GGCC	4 cut(s)	71, 103, 630, 762
BspCNI	CTCAG	4 cut(s)	232, 523, 985, 1391
BspHI	TCATGA	2 cut(s)	255, 1132
BspLI	GGNNCC	1 cut(s)	662
BspMI	ACCTGC	1 cut(s)	724
BspPI	GGATC	4 cut(s)	865, 919, 1405, 1520
BspT107I	GGYRCC	1 cut(s)	660
BspTI	CTTAAG	1 cut(s)	1466
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	2 cut(s)	547, 631
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	3 cut(s)	31, 231, 592
BssNI	GRCGYC	1 cut(s)	333
BssT1I	CCWWGG	1 cut(s)	592
Bst2UI	CCWGG	2 cut(s)	233, 1128
Bst4CI	ACNGT	3 cut(s)	440, 623, 688
Bst6I	CTCTTC	1 cut(s)	1301
BstACI	GRCGYC	1 cut(s)	333
BstAFI	CTTAAG	1 cut(s)	1466
BstAPI	GCANNNNNTGC	1 cut(s)	1238
BstBAI	YACGTR	1 cut(s)	1229
BstC8I	GCNNGC	5 cut(s)	6, 105, 1034, 1203, 1239
BstDEI	CTNAG	6 cut(s)	113, 240, 531, 746, 993, 1378
BstF5I	GGATG	3 cut(s)	388, 427, 1003
BstHHI	GCGC	1 cut(s)	1282
BstMAI	GTCTC	1 cut(s)	1168
BstMCI	CGRYCG	1 cut(s)	72
BstMWI	GCNNNNNNNGC	4 cut(s)	109, 236, 1238, 1328
BstNI	CCWGG	2 cut(s)	233, 1128
BstNSI	RCATGY	2 cut(s)	1036, 1205
BstSCI	CCNGG	4 cut(s)	31, 231, 1126, 1477
BstSFI	CTRYAG	1 cut(s)	486
BstSLI	GKGCMC	1 cut(s)	665
BstV1I	GCAGC	3 cut(s)	508, 855, 1048
BstV2I	GAAGAC	1 cut(s)	624
BstX2I	RGATCY	3 cut(s)	779, 857, 865
BstXI	CCANNNNNNTGG	1 cut(s)	854
BstYI	RGATCY	3 cut(s)	779, 857, 865
BstZI	CGGCCG	1 cut(s)	69
BsuI	GTATCC	1 cut(s)	1485
BsuRI	GGCC	4 cut(s)	71, 103, 630, 762
BtgZI	GCGATG	1 cut(s)	1277
BtrI	CACGTC	2 cut(s)	58, 92
BtsCI	GGATG	3 cut(s)	388, 427, 1003
BtsIMutI	CAGTG	1 cut(s)	445
BveI	ACCTGC	1 cut(s)	724
Cac8I	GCNNGC	5 cut(s)	6, 105, 1034, 1203, 1239
CciI	TCATGA	2 cut(s)	255, 1132
CfoI	GCGC	1 cut(s)	1282
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	4 cut(s)	49, 101, 761, 1365
CseI	GACGC	2 cut(s)	341, 483
Csp6I	GTAC	5 cut(s)	507, 624, 1022, 1064, 1443
CviAII	CATG	5 cut(s)	256, 653, 1033, 1133, 1202
CviQI	GTAC	5 cut(s)	507, 624, 1022, 1064, 1443
DdeI	CTNAG	6 cut(s)	113, 240, 531, 746, 993, 1378
EaeI	YGGCCR	1 cut(s)	69
EagI	CGGCCG	1 cut(s)	69
Eam1104I	CTCTTC	1 cut(s)	1301
EarI	CTCTTC	1 cut(s)	1301
EclXI	CGGCCG	1 cut(s)	69
Eco130I	CCWWGG	1 cut(s)	592
Eco24I	GRGCYC	1 cut(s)	266
Eco47I	GGWCC	2 cut(s)	49, 1365
Eco52I	CGGCCG	1 cut(s)	69
Eco57I	CTGAAG	1 cut(s)	846
Eco72I	CACGTG	1 cut(s)	1229
Eco88I	CYCGRG	1 cut(s)	276
EcoRI	GAATTC	1 cut(s)	1026
EcoRII	CCWGG	2 cut(s)	231, 1126
EcoT14I	CCWWGG	1 cut(s)	592
EcoT22I	ATGCAT	1 cut(s)	1203
EcoT38I	GRGCYC	1 cut(s)	266
ErhI	CCWWGG	1 cut(s)	592
FaeI	CATG	5 cut(s)	259, 656, 1036, 1136, 1205
FalI	AAGNNNNNCTT	4 cut(s)	284, 316, 729, 761
FaqI	GGGAC	3 cut(s)	14, 102, 311
FatI	CATG	5 cut(s)	255, 652, 1032, 1132, 1201
FauI	CCCGC	1 cut(s)	78
FauNDI	CATATG	1 cut(s)	1402
FbaI	TGATCA	1 cut(s)	1005
FblI	GTMKAC	1 cut(s)	330
Fnu4HI	GCNGC	4 cut(s)	72, 522, 844, 1037
FokI	GGATG	3 cut(s)	395, 434, 1010
FriOI	GRGCYC	1 cut(s)	266
Fsp4HI	GCNGC	4 cut(s)	72, 522, 844, 1037
FspBI	CTAG	5 cut(s)	26, 149, 515, 986, 1089
FspI	TGCGCA	1 cut(s)	1281
GlaI	GCGC	1 cut(s)	1281
GluI	GCNGC	4 cut(s)	72, 522, 844, 1037
GsaI	CCCAGC	2 cut(s)	315, 368
HaeIII	GGCC	4 cut(s)	71, 103, 630, 762
HapII	CCGG	5 cut(s)	33, 47, 75, 104, 1479
HgaI	GACGC	2 cut(s)	341, 483
HhaI	GCGC	1 cut(s)	1282
Hin1I	GRCGYC	1 cut(s)	333
Hin1II	CATG	5 cut(s)	259, 656, 1036, 1136, 1205
Hin6I	GCGC	1 cut(s)	1280
HinP1I	GCGC	1 cut(s)	1280
HincII	GTYRAC	1 cut(s)	331
HindII	GTYRAC	1 cut(s)	331
HindIII	AAGCTT	1 cut(s)	1235
HinfI	GANTC	8 cut(s)	206, 374, 443, 464, 546, 989, 1046, 1449
HpaII	CCGG	5 cut(s)	33, 47, 75, 104, 1479
HphI	GGTGA	5 cut(s)	4, 52, 804, 896, 1129
Hpy166II	GTNNAC	1 cut(s)	331
Hpy188III	TCNNGA	6 cut(s)	256, 398, 869, 986, 1133, 1184
Hpy8I	GTNNAC	1 cut(s)	331
Hpy99I	CGWCG	3 cut(s)	335, 499, 502
HpyAV	CCTTC	8 cut(s)	19, 167, 212, 253, 341, 419, 969, 1244
HpyCH4III	ACNGT	3 cut(s)	440, 623, 688
HpyCH4IV	ACGT	4 cut(s)	57, 91, 1219, 1228
HpyCH4V	TGCA	7 cut(s)	524, 695, 928, 1036, 1100, 1201, 1232
HpyF10VI	GCNNNNNNNGC	4 cut(s)	109, 236, 1238, 1328
HpyF3I	CTNAG	6 cut(s)	113, 240, 531, 746, 993, 1378
HpySE526I	ACGT	4 cut(s)	57, 91, 1219, 1228
Hsp92I	GRCGYC	1 cut(s)	333
Hsp92II	CATG	5 cut(s)	259, 656, 1036, 1136, 1205
HspAI	GCGC	1 cut(s)	1280
KroI	GCCGGC	1 cut(s)	103
KroNI	GCCGGC	1 cut(s)	105
Ksp22I	TGATCA	1 cut(s)	1005
LmnI	GCTCC	2 cut(s)	840, 1145
Lsp1109I	GCAGC	3 cut(s)	508, 855, 1048
LweI	GCATC	5 cut(s)	670, 781, 1159, 1267, 1309
MaeI	CTAG	5 cut(s)	26, 149, 515, 986, 1089
MaeII	ACGT	4 cut(s)	57, 91, 1219, 1228
MaeIII	GTNAC	1 cut(s)	58
MfeI	CAATTG	1 cut(s)	1539
MflI	RGATCY	3 cut(s)	779, 857, 865
MhlI	GDGCHC	2 cut(s)	266, 665
MmeI	TCCRAC	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	1203
MroNI	GCCGGC	1 cut(s)	103
MroXI	GAANNNNTTC	1 cut(s)	939
MseI	TTAA	3 cut(s)	1314, 1355, 1467
MspCI	CTTAAG	1 cut(s)	1466
MspI	CCGG	5 cut(s)	33, 47, 75, 104, 1479
MspR9I	CCNGG	4 cut(s)	33, 233, 1128, 1479
MunI	CAATTG	1 cut(s)	1539
MvaI	CCWGG	2 cut(s)	233, 1128
MwoI	GCNNNNNNNGC	4 cut(s)	109, 236, 1238, 1328
NaeI	GCCGGC	1 cut(s)	105
NciI	CCSGG	2 cut(s)	33, 1479
NdeI	CATATG	1 cut(s)	1402
NgoMIV	GCCGGC	1 cut(s)	103
NlaIII	CATG	5 cut(s)	259, 656, 1036, 1136, 1205
NlaIV	GGNNCC	1 cut(s)	662
NmuCI	GTSAC	1 cut(s)	58
NsbI	TGCGCA	1 cut(s)	1281
NsiI	ATGCAT	1 cut(s)	1203
NspI	RCATGY	2 cut(s)	1036, 1205
PaeI	GCATGC	2 cut(s)	1036, 1205
PaeR7I	CTCGAG	1 cut(s)	276
PagI	TCATGA	2 cut(s)	255, 1132
PcsI	WCGNNNNNNNCGW	1 cut(s)	1225
PdiI	GCCGGC	1 cut(s)	105
PdmI	GAANNNNTTC	1 cut(s)	939
PfeI	GAWTC	8 cut(s)	206, 374, 443, 464, 546, 989, 1046, 1449
PkrI	GCNGC	4 cut(s)	73, 523, 845, 1038
PmaCI	CACGTG	1 cut(s)	1229
PmlI	CACGTG	1 cut(s)	1229
Ppu21I	YACGTR	1 cut(s)	1229
PsiI	TTATAA	1 cut(s)	1580
Psp6I	CCWGG	2 cut(s)	231, 1126
PspCI	CACGTG	1 cut(s)	1229
PspFI	CCCAGC	2 cut(s)	311, 364
PspGI	CCWGG	2 cut(s)	231, 1126
PspN4I	GGNNCC	1 cut(s)	662
PspPI	GGNCC	4 cut(s)	49, 101, 761, 1365
PspXI	VCTCGAGB	1 cut(s)	276
PsuI	RGATCY	3 cut(s)	779, 857, 865
RsaI	GTAC	5 cut(s)	508, 625, 1023, 1065, 1444
RsaNI	GTAC	5 cut(s)	507, 624, 1022, 1064, 1443
SalI	GTCGAC	1 cut(s)	329
SaqAI	TTAA	3 cut(s)	1314, 1355, 1467
SatI	GCNGC	4 cut(s)	72, 522, 844, 1037
Sau96I	GGNCC	4 cut(s)	49, 101, 761, 1365
ScaI	AGTACT	1 cut(s)	625
ScrFI	CCNGG	4 cut(s)	33, 233, 1128, 1479
SduI	GDGCHC	2 cut(s)	266, 665
SfaNI	GCATC	5 cut(s)	670, 781, 1159, 1267, 1309
SfcI	CTRYAG	1 cut(s)	486
Sfr274I	CTCGAG	1 cut(s)	276
SinI	GGWCC	2 cut(s)	49, 1365
SlaI	CTCGAG	1 cut(s)	276
SmlI	CTYRAG	3 cut(s)	276, 396, 1466
SmoI	CTYRAG	3 cut(s)	276, 396, 1466
SpeI	ACTAGT	1 cut(s)	1088
SphI	GCATGC	2 cut(s)	1036, 1205
SsiI	CCGC	4 cut(s)	72, 85, 196, 1156
SspMI	CTAG	5 cut(s)	26, 149, 515, 986, 1089
StyD4I	CCNGG	4 cut(s)	31, 231, 1126, 1477
StyI	CCWWGG	1 cut(s)	592
TaaI	ACNGT	3 cut(s)	440, 623, 688
TaiI	ACGT	4 cut(s)	60, 94, 1222, 1231
TaqI	TCGA	4 cut(s)	277, 330, 549, 1439
TatI	WGTACW	3 cut(s)	623, 1063, 1442
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	8 cut(s)	206, 374, 443, 464, 546, 989, 1046, 1449
Tru1I	TTAA	3 cut(s)	1314, 1355, 1467
Tru9I	TTAA	3 cut(s)	1314, 1355, 1467
TscAI	CASTG	1 cut(s)	445
TseFI	GTSAC	1 cut(s)	58
TseI	GCWGC	3 cut(s)	521, 843, 1036
Tsp45I	GTSAC	1 cut(s)	58
TspGWI	ACGGA	1 cut(s)	1569
TspRI	CASTG	1 cut(s)	445
Vha464I	CTTAAG	1 cut(s)	1466
VpaK11BI	GGWCC	2 cut(s)	49, 1365
XapI	RAATTY	4 cut(s)	583, 872, 1026, 1496
XbaI	TCTAGA	1 cut(s)	985
XceI	RCATGY	2 cut(s)	1036, 1205
XhoI	CTCGAG	1 cut(s)	276
XmiI	GTMKAC	1 cut(s)	330
XmnI	GAANNNNTTC	1 cut(s)	939
XspI	CTAG	5 cut(s)	26, 149, 515, 986, 1089
ZrmI	AGTACT	1 cut(s)	625
Zsp2I	ATGCAT	1 cut(s)	1203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.