Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0007960

Physical Location & Seq

Genomic Coordinates Reverse (-)

61475275 .. 61478940

Gene Structure 3666 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00381550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGCTCGCCTTCACCCACTTCCATCTAGTCCCCGGTTTTTTTCCTCCGGTCCTCCACGTCACCAATTCGGCCGCCGGAATGAGGCGGGGACGTGTTCTTGAGCCGGCGAGGCTTAGGGTGGTGGGAGAAAGCAGGGTTTCTGTTGTTCTAGGGTTTTGGGAGGGGAGGAAAGAAGCGGGTTGTGAGTTTGTGAGGCGGTGTAGGGATTCGGATTTGGAAGGGGATTTTGCCCTGGAAGCTGAGATTTTGGAGTTCATGAAGGGCTCGGAGAAGCCTCGGGCTTTTCCGAGCAAGAGGGACTTGGTGGAAGCTGGGAGGTTGGATTTGGTCGACGCCATTGTGAGGGAAGGTGGTTGGCTTTCGTTAGGTTGGGATTTGGGGGATGAAGAAACAGCTCAAGATAGTGGCTTTAGGAATTGGGATGAAAGATATGAGACCAGTGATTCCGATATGGTTTCTGATGATTCTTCTTCTTCTTCTTCTATAGTAGCGTCGTCGTCTGGTACATCACTAGAAGCTGCAACAACTGAGGTTGATACTGGAATCGAGGGTATATTGAACCGATTAGAGAAACAGAGAAATTTGACCCTTGGGTTTGTTTCGAGAGATAAAGAAGAGAGTACTGGCCTCGCAAATGATAGTAACAAACATGATCAGTGTCCTGATACCTCAACTGATGCGACAGTTGGCGCAACAAGCAGAAGTATCAGACCTGCTTCATCAAACCCCACTAAAGCCATTCTTAGTGATTTGGGAGGCCCACATAATCATAGCAGATCTCTTTTAGATGCTGATGTTCAGAGAAACTCACCAAAGCCTGAAATGTGGAGAACTTGGAGCAGCCAAAGGGCTGGATCTTCAGATCTGGAATTTGAAGCTGGTGAAGTTTCTTATGATGAAATGGGAGGATCAAAGGGAGTTTTGCAAAATGAAATACTTCAAACGAAAGAGGGTGCTAATGAACCGAATGGAAGGAATGATCTAGATTCTGAGGATGAAGTGATCAATTACAAACAAGTACGAATTCGCATGCAGCACCTTGAATCCGAGCTCTCCTCTGTACTGCACTCATTGAGGTCTAAAACTAGTAATGTTGCACCAAAGGAGATGGGGATGATTACTCCTGGTCATGAAAGCTCCTCTGATGATTTGCGGAAAATCTCTGATGCTTGGGAGTTTCAAGAAAATGAAATTATGCATGCCCAGAACAAATTACGTTCAACACGTGCAAAACTTGCTGTTTTAGAAGGAAAGATGGCGATGGCAATAATTGATGCGCAAAAGAAAGTGGAGGAGAAACAGAAGAGGGTTAATGATGCTCGGAGAGCCTTACGGCTTCTCCGAACTGCTTTAATAGTTTGGACCAATCCAGCCTCAGAAGTGCTTTTAGCAGGATCATATGATGGTTGGGCTACCCAGCAGTACTCATCTACTGGCTCCATTGTTACAAATGTTGTTATCTGTGGTGATTGCTTGCAGAGAAAGATGGAGAGGTCGAGTACAGGAATCTTCTCTGTTAGCCTTAAGTTGTATCCGGGTAGATATGAGATCAAATTCATTGTTGATGGGGAATGGCGAATTGATCCCCTACGCCCTATTGTTCGCAACAACGGATTTGAAAATAATATACTGATTATAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0001871 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0006109 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010556 GO:0010581 GO:0010675 GO:0010962 GO:0016051 GO:0019222 GO:0019252 GO:0030246 GO:0030247 GO:0031323 GO:0031326 GO:0032881 GO:0032885 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060255 GO:0065007 GO:0070492 GO:0071704 GO:0080050 GO:0080090 GO:0097367 GO:1901576 GO:2000014 GO:2000026 GO:2000112 GO:2000241 GO:2000904 GO:2001066 GO:2001070 GO:2001071

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMPK1_CBM

Protein Analysis

547

Amino Acids

60.72

Weight (kDa)

5.3

Isoelectric Point (pI)

46.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMPK1_CBM	PF16561	451 - 546	2.7e-11	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27070
fragaria_vesca	FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100
malus_domestica	MD13G1079900.v1.1 MD16G1079800.v1.1
prunus_persica	Prupe.1G266900_v2.0.a1
pyrus_communis	pycom13g06940 pycom16g06890
rosa_chinensis	RchiOBHm_Chr4g0440791
rosa_laevigata	RLG00000006153
rosa_multiflora	Rmu_sc0000424.1_g000007 Rmu_sc0000780.1_g000019 Rmu_sc0022158.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381550
rosa_rugosa	Rorug04G0327900 Rorug04G0328000
rosa_samantha	Rh4AG379800 Rh4BG392700 Rh4CG407500 Rh4DG386500
rosa_wichuraiana	Rw4G032700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1637
Acc16I	TGCGCA	1 cut(s)	1278
Acc36I	ACCTGC	1 cut(s)	721
AccI	GTMKAC	1 cut(s)	330
AciI	CCGC	5 cut(s)	72, 85, 176, 196, 1153
AclWI	GGATC	4 cut(s)	862, 916, 1402, 1577
AcoI	YGGCCR	1 cut(s)	69
AcsI	RAATTY	4 cut(s)	580, 869, 1023, 1553
AcuI	CTGAAG	1 cut(s)	843
AcvI	CACGTG	1 cut(s)	1226
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	6 cut(s)	505, 622, 1020, 1062, 1424, 1501
AfiI	CCNNNNNNNGG	2 cut(s)	81, 342
AflII	CTTAAG	1 cut(s)	1523
AflIII	ACRYGT	2 cut(s)	91, 1223
AgsI	TTSAA	7 cut(s)	559, 875, 941, 1043, 1181, 1221, 1619
AhlI	ACTAGT	1 cut(s)	1085
AjiI	CACGTC	2 cut(s)	58, 92
AjnI	CCWGG	2 cut(s)	231, 1123
AluBI	AGCT	7 cut(s)	239, 311, 395, 518, 878, 1051, 1137
AluI	AGCT	7 cut(s)	239, 311, 395, 518, 878, 1051, 1137
Alw21I	GWGCWC	1 cut(s)	1053
Alw26I	GTCTC	1 cut(s)	428
AlwI	GGATC	4 cut(s)	862, 916, 1402, 1577
Ama87I	CYCGRG	1 cut(s)	276
AoxI	GGCC	3 cut(s)	69, 625, 757
ApeKI	GCWGC	3 cut(s)	518, 840, 1033
ApoI	RAATTY	4 cut(s)	580, 869, 1023, 1553
Asp700I	GAANNNNTTC	1 cut(s)	936
AspLEI	GCGC	2 cut(s)	692, 1279
AspS9I	GGNCC	3 cut(s)	49, 758, 1362
AsuC2I	CCSGG	2 cut(s)	33, 1536
AsuHPI	GGTGA	5 cut(s)	4, 52, 801, 893, 1478
AvaI	CYCGRG	1 cut(s)	276
AvaII	GGWCC	2 cut(s)	49, 1362
BanII	GRGCYC	2 cut(s)	266, 1053
BbrPI	CACGTG	1 cut(s)	1226
Bbv12I	GWGCWC	1 cut(s)	1053
BbvI	GCAGC	3 cut(s)	505, 852, 1045
BccI	CCATC	7 cut(s)	30, 1102, 1249, 1255, 1397, 1480, 1559
BceAI	ACGGC	1 cut(s)	1349
BciT130I	CCWGG	2 cut(s)	233, 1125
BciVI	GTATCC	1 cut(s)	1542
BclI	TGATCA	2 cut(s)	652, 1002
BcnI	CCSGG	2 cut(s)	33, 1536
BcoDI	GTCTC	1 cut(s)	428
BcuI	ACTAGT	1 cut(s)	1085
BfaI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
BfmI	CTRYAG	1 cut(s)	483
BfrI	CTTAAG	1 cut(s)	1523
BfuAI	ACCTGC	1 cut(s)	721
BfuI	GTATCC	1 cut(s)	1542
BglI	GCCNNNNNGGC	1 cut(s)	109
BglII	AGATCT	2 cut(s)	776, 862
BisI	GCNGC	4 cut(s)	72, 519, 841, 1034
BlsI	GCNGC	4 cut(s)	73, 520, 842, 1035
BmcAI	AGTACT	2 cut(s)	622, 1424
Bme1390I	CCNGG	4 cut(s)	33, 233, 1125, 1536
Bme18I	GGWCC	2 cut(s)	49, 1362
BmeT110I	CYCGRG	1 cut(s)	276
BmgBI	CACGTC	2 cut(s)	58, 92
BmgT120I	GGNCC	3 cut(s)	49, 758, 1362
BmiI	GGNNCC	1 cut(s)	1438
BmrFI	CCNGG	4 cut(s)	33, 233, 1125, 1536
BmsI	GCATC	5 cut(s)	667, 778, 1156, 1264, 1306
BplI	GAGNNNNNCTC	2 cut(s)	1040, 1072
Bpu10I	CCTNAGC	1 cut(s)	113
BpuEI	CTTGAG	2 cut(s)	119, 381
BpuMI	CCSGG	2 cut(s)	33, 1536
BsaAI	YACGTR	1 cut(s)	1226
BsaHI	GRCGYC	1 cut(s)	333
BsaI	GGTCTC	1 cut(s)	428
BsaJI	CCNNGG	4 cut(s)	31, 231, 275, 589
BsaWI	WCCGGW	1 cut(s)	46
BsaXI	ACNNNNNCTCC	2 cut(s)	1323, 1353
Bsc4I	CCNNNNNNNGG	2 cut(s)	81, 342
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	4 cut(s)	438, 544, 628, 1438
BseBI	CCWGG	2 cut(s)	233, 1125
BseDI	CCNNGG	4 cut(s)	31, 231, 275, 589
BseGI	GGATG	4 cut(s)	388, 427, 1000, 1119
BseLI	CCNNNNNNNGG	2 cut(s)	81, 342
BseMII	CTCAG	4 cut(s)	231, 519, 981, 1389
BseNI	ACTGG	4 cut(s)	438, 544, 628, 1438
BseRI	GAGGAG	3 cut(s)	1045, 1129, 1307
BseX3I	CGGCCG	1 cut(s)	69
BseXI	GCAGC	3 cut(s)	505, 852, 1045
BseYI	CCCAGC	2 cut(s)	311, 1416
BsgI	GTGCAG	1 cut(s)	1049
Bsh1285I	CGRYCG	1 cut(s)	72
BshFI	GGCC	3 cut(s)	71, 627, 759
BsiEI	CGRYCG	1 cut(s)	72
BsiHKAI	GWGCWC	1 cut(s)	1053
BsiHKCI	CYCGRG	1 cut(s)	276
BsiSI	CCGG	5 cut(s)	33, 47, 75, 104, 1535
BslFI	GGGAC	3 cut(s)	14, 102, 311
BslI	CCNNNNNNNGG	2 cut(s)	81, 342
BsmAI	GTCTC	1 cut(s)	428
BsmFI	GGGAC	3 cut(s)	14, 102, 311
BsnI	GGCC	3 cut(s)	71, 627, 759
Bso31I	GGTCTC	1 cut(s)	428
BsoBI	CYCGRG	1 cut(s)	276
Bsp1286I	GDGCHC	2 cut(s)	266, 1053
BspACI	CCGC	5 cut(s)	72, 85, 176, 196, 1153
BspANI	GGCC	3 cut(s)	71, 627, 759
BspCNI	CTCAG	4 cut(s)	232, 520, 982, 1388
BspHI	TCATGA	2 cut(s)	255, 1129
BspLI	GGNNCC	1 cut(s)	1438
BspMI	ACCTGC	1 cut(s)	721
BspPI	GGATC	4 cut(s)	862, 916, 1402, 1577
BspTI	CTTAAG	1 cut(s)	1523
BspTNI	GGTCTC	1 cut(s)	428
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	4 cut(s)	438, 544, 628, 1438
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	4 cut(s)	31, 231, 275, 589
BssNI	GRCGYC	1 cut(s)	333
BssT1I	CCWWGG	1 cut(s)	589
Bst2UI	CCWGG	2 cut(s)	233, 1125
Bst4CI	ACNGT	1 cut(s)	685
Bst6I	CTCTTC	2 cut(s)	609, 1298
BstACI	GRCGYC	1 cut(s)	333
BstAFI	CTTAAG	1 cut(s)	1523
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstBAI	YACGTR	1 cut(s)	1226
BstC8I	GCNNGC	5 cut(s)	6, 105, 1031, 1200, 1475
BstDEI	CTNAG	6 cut(s)	113, 240, 528, 743, 990, 1375
BstF5I	GGATG	4 cut(s)	388, 427, 1000, 1119
BstHHI	GCGC	2 cut(s)	692, 1279
BstMAI	GTCTC	1 cut(s)	428
BstMCI	CGRYCG	1 cut(s)	72
BstMWI	GCNNNNNNNGC	5 cut(s)	109, 236, 696, 1235, 1325
BstNI	CCWGG	2 cut(s)	233, 1125
BstNSI	RCATGY	2 cut(s)	1033, 1202
BstSCI	CCNGG	4 cut(s)	31, 231, 1123, 1534
BstSFI	CTRYAG	1 cut(s)	483
BstV1I	GCAGC	3 cut(s)	505, 852, 1045
BstX2I	RGATCY	3 cut(s)	776, 854, 862
BstXI	CCANNNNNNTGG	1 cut(s)	851
BstYI	RGATCY	3 cut(s)	776, 854, 862
BstZI	CGGCCG	1 cut(s)	69
BsuI	GTATCC	1 cut(s)	1542
BsuRI	GGCC	3 cut(s)	71, 627, 759
BtgZI	GCGATG	1 cut(s)	1274
BtrI	CACGTC	2 cut(s)	58, 92
BtsCI	GGATG	4 cut(s)	388, 427, 1000, 1119
BtsIMutI	CAGTG	2 cut(s)	445, 662
BveI	ACCTGC	1 cut(s)	721
Cac8I	GCNNGC	5 cut(s)	6, 105, 1031, 1200, 1475
CciI	TCATGA	2 cut(s)	255, 1129
CfoI	GCGC	2 cut(s)	692, 1279
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	3 cut(s)	49, 758, 1362
CseI	GACGC	2 cut(s)	341, 480
Csp6I	GTAC	6 cut(s)	504, 621, 1019, 1061, 1423, 1500
CviAII	CATG	5 cut(s)	256, 650, 1030, 1130, 1199
CviQI	GTAC	6 cut(s)	504, 621, 1019, 1061, 1423, 1500
DdeI	CTNAG	6 cut(s)	113, 240, 528, 743, 990, 1375
EaeI	YGGCCR	1 cut(s)	69
EagI	CGGCCG	1 cut(s)	69
Eam1104I	CTCTTC	2 cut(s)	609, 1298
EarI	CTCTTC	2 cut(s)	609, 1298
Ecl136II	GAGCTC	1 cut(s)	1051
EclXI	CGGCCG	1 cut(s)	69
Eco130I	CCWWGG	1 cut(s)	589
Eco24I	GRGCYC	2 cut(s)	266, 1053
Eco31I	GGTCTC	1 cut(s)	428
Eco47I	GGWCC	2 cut(s)	49, 1362
Eco52I	CGGCCG	1 cut(s)	69
Eco53kI	GAGCTC	1 cut(s)	1051
Eco57I	CTGAAG	1 cut(s)	843
Eco72I	CACGTG	1 cut(s)	1226
Eco88I	CYCGRG	1 cut(s)	276
EcoICRI	GAGCTC	1 cut(s)	1051
EcoRI	GAATTC	1 cut(s)	1023
EcoRII	CCWGG	2 cut(s)	231, 1123
EcoT14I	CCWWGG	1 cut(s)	589
EcoT22I	ATGCAT	1 cut(s)	1200
EcoT38I	GRGCYC	2 cut(s)	266, 1053
ErhI	CCWWGG	1 cut(s)	589
FaeI	CATG	5 cut(s)	259, 653, 1033, 1133, 1202
FalI	AAGNNNNNCTT	4 cut(s)	284, 316, 726, 758
FaqI	GGGAC	3 cut(s)	14, 102, 311
FatI	CATG	5 cut(s)	255, 649, 1029, 1129, 1198
FauI	CCCGC	2 cut(s)	78, 169
FauNDI	CATATG	1 cut(s)	1399
FbaI	TGATCA	2 cut(s)	652, 1002
FblI	GTMKAC	1 cut(s)	330
Fnu4HI	GCNGC	4 cut(s)	72, 519, 841, 1034
FokI	GGATG	4 cut(s)	395, 434, 1007, 1126
FriOI	GRGCYC	2 cut(s)	266, 1053
Fsp4HI	GCNGC	4 cut(s)	72, 519, 841, 1034
FspBI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
FspI	TGCGCA	1 cut(s)	1278
GlaI	GCGC	2 cut(s)	691, 1278
GluI	GCNGC	4 cut(s)	72, 519, 841, 1034
GsaI	CCCAGC	2 cut(s)	315, 1420
HaeIII	GGCC	3 cut(s)	71, 627, 759
HapII	CCGG	5 cut(s)	33, 47, 75, 104, 1535
HgaI	GACGC	2 cut(s)	341, 480
HhaI	GCGC	2 cut(s)	692, 1279
Hin1I	GRCGYC	1 cut(s)	333
Hin1II	CATG	5 cut(s)	259, 653, 1033, 1133, 1202
Hin6I	GCGC	2 cut(s)	690, 1277
HinP1I	GCGC	2 cut(s)	690, 1277
HincII	GTYRAC	1 cut(s)	331
HindII	GTYRAC	1 cut(s)	331
HinfI	GANTC	7 cut(s)	206, 443, 464, 543, 986, 1043, 1506
HpaII	CCGG	5 cut(s)	33, 47, 75, 104, 1535
HphI	GGTGA	5 cut(s)	4, 52, 801, 893, 1478
Hpy166II	GTNNAC	1 cut(s)	331
Hpy188III	TCNNGA	9 cut(s)	98, 256, 398, 603, 662, 866, 983, 1130, 1181
Hpy8I	GTNNAC	1 cut(s)	331
Hpy99I	CGWCG	3 cut(s)	335, 496, 499
HpyAV	CCTTC	6 cut(s)	19, 212, 253, 341, 966, 1241
HpyCH4III	ACNGT	1 cut(s)	685
HpyCH4IV	ACGT	4 cut(s)	57, 91, 1216, 1225
HpyCH4V	TGCA	8 cut(s)	521, 925, 1033, 1066, 1097, 1198, 1229, 1477
HpyF10VI	GCNNNNNNNGC	5 cut(s)	109, 236, 696, 1235, 1325
HpyF3I	CTNAG	6 cut(s)	113, 240, 528, 743, 990, 1375
HpySE526I	ACGT	4 cut(s)	57, 91, 1216, 1225
Hsp92I	GRCGYC	1 cut(s)	333
Hsp92II	CATG	5 cut(s)	259, 653, 1033, 1133, 1202
HspAI	GCGC	2 cut(s)	690, 1277
KroI	GCCGGC	1 cut(s)	103
KroNI	GCCGGC	1 cut(s)	105
Ksp22I	TGATCA	2 cut(s)	652, 1002
LmnI	GCTCC	3 cut(s)	837, 1142, 1442
Lsp1109I	GCAGC	3 cut(s)	505, 852, 1045
LweI	GCATC	5 cut(s)	667, 778, 1156, 1264, 1306
MaeI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
MaeII	ACGT	4 cut(s)	57, 91, 1216, 1225
MaeIII	GTNAC	3 cut(s)	58, 641, 1444
MflI	RGATCY	3 cut(s)	776, 854, 862
MhlI	GDGCHC	2 cut(s)	266, 1053
MmeI	TCCRAC	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	1200
MroNI	GCCGGC	1 cut(s)	103
MroXI	GAANNNNTTC	1 cut(s)	936
MseI	TTAA	3 cut(s)	1311, 1352, 1524
MspCI	CTTAAG	1 cut(s)	1523
MspI	CCGG	5 cut(s)	33, 47, 75, 104, 1535
MspR9I	CCNGG	4 cut(s)	33, 233, 1125, 1536
MvaI	CCWGG	2 cut(s)	233, 1125
MwoI	GCNNNNNNNGC	5 cut(s)	109, 236, 696, 1235, 1325
NaeI	GCCGGC	1 cut(s)	105
NciI	CCSGG	2 cut(s)	33, 1536
NdeI	CATATG	1 cut(s)	1399
NgoMIV	GCCGGC	1 cut(s)	103
NlaIII	CATG	5 cut(s)	259, 653, 1033, 1133, 1202
NlaIV	GGNNCC	1 cut(s)	1438
NmuCI	GTSAC	1 cut(s)	58
NsbI	TGCGCA	1 cut(s)	1278
NsiI	ATGCAT	1 cut(s)	1200
NspI	RCATGY	2 cut(s)	1033, 1202
PaeI	GCATGC	2 cut(s)	1033, 1202
PagI	TCATGA	2 cut(s)	255, 1129
PcsI	WCGNNNNNNNCGW	2 cut(s)	1222, 1339
PdiI	GCCGGC	1 cut(s)	105
PdmI	GAANNNNTTC	1 cut(s)	936
PfeI	GAWTC	7 cut(s)	206, 443, 464, 543, 986, 1043, 1506
PkrI	GCNGC	4 cut(s)	73, 520, 842, 1035
PmaCI	CACGTG	1 cut(s)	1226
PmlI	CACGTG	1 cut(s)	1226
Ppu21I	YACGTR	1 cut(s)	1226
PsiI	TTATAA	1 cut(s)	1637
Psp124BI	GAGCTC	1 cut(s)	1053
Psp6I	CCWGG	2 cut(s)	231, 1123
PspCI	CACGTG	1 cut(s)	1226
PspFI	CCCAGC	2 cut(s)	311, 1416
PspGI	CCWGG	2 cut(s)	231, 1123
PspN4I	GGNNCC	1 cut(s)	1438
PspPI	GGNCC	3 cut(s)	49, 758, 1362
PsuI	RGATCY	3 cut(s)	776, 854, 862
RsaI	GTAC	6 cut(s)	505, 622, 1020, 1062, 1424, 1501
RsaNI	GTAC	6 cut(s)	504, 621, 1019, 1061, 1423, 1500
SacI	GAGCTC	1 cut(s)	1053
SalI	GTCGAC	1 cut(s)	329
SaqAI	TTAA	3 cut(s)	1311, 1352, 1524
SatI	GCNGC	4 cut(s)	72, 519, 841, 1034
Sau96I	GGNCC	3 cut(s)	49, 758, 1362
ScaI	AGTACT	2 cut(s)	622, 1424
ScrFI	CCNGG	4 cut(s)	33, 233, 1125, 1536
SduI	GDGCHC	2 cut(s)	266, 1053
SfaNI	GCATC	5 cut(s)	667, 778, 1156, 1264, 1306
SfcI	CTRYAG	1 cut(s)	483
SinI	GGWCC	2 cut(s)	49, 1362
SmlI	CTYRAG	3 cut(s)	98, 396, 1523
SmoI	CTYRAG	3 cut(s)	98, 396, 1523
SpeI	ACTAGT	1 cut(s)	1085
SphI	GCATGC	2 cut(s)	1033, 1202
SsiI	CCGC	5 cut(s)	72, 85, 176, 196, 1153
SspMI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
SstI	GAGCTC	1 cut(s)	1053
StyD4I	CCNGG	4 cut(s)	31, 231, 1123, 1534
StyI	CCWWGG	1 cut(s)	589
TaaI	ACNGT	1 cut(s)	685
TaiI	ACGT	4 cut(s)	60, 94, 1219, 1228
TaqI	TCGA	4 cut(s)	330, 546, 602, 1496
TatI	WGTACW	4 cut(s)	620, 1060, 1422, 1499
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	7 cut(s)	206, 443, 464, 543, 986, 1043, 1506
Tru1I	TTAA	3 cut(s)	1311, 1352, 1524
Tru9I	TTAA	3 cut(s)	1311, 1352, 1524
TscAI	CASTG	2 cut(s)	445, 662
TseFI	GTSAC	1 cut(s)	58
TseI	GCWGC	3 cut(s)	518, 840, 1033
Tsp45I	GTSAC	1 cut(s)	58
TspGWI	ACGGA	1 cut(s)	1626
TspRI	CASTG	2 cut(s)	445, 662
Vha464I	CTTAAG	1 cut(s)	1523
VpaK11BI	GGWCC	2 cut(s)	49, 1362
XapI	RAATTY	4 cut(s)	580, 869, 1023, 1553
XbaI	TCTAGA	1 cut(s)	982
XceI	RCATGY	2 cut(s)	1033, 1202
XmiI	GTMKAC	1 cut(s)	330
XmnI	GAANNNNTTC	1 cut(s)	936
XspI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
ZrmI	AGTACT	2 cut(s)	622, 1424
Zsp2I	ATGCAT	1 cut(s)	1200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.