Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007960

Physical Location & Seq

Genomic Coordinates Reverse (-)

62774929 .. 62778664

Gene Structure 3736 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40873

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGCTCGCCTTCACCCACTTCCATCTAGTCCCCGGTTTTTTTCCTCCGGTCCTCCACGTCACCAATTCGGCCTCCGGAATGAGGCGGGGACGTGTTCTTGGGCCGGCGAGGCTTAGGGTGGTGGGAGAAAGCAGGGTTTCTGTTGTTCTAGGGTTTTGGGAGGGGAGGAAAGAAGGGGGTTGTGGGTTTGTGAGGCGGTGTAGGGATTCGGATTTGGAAGGGGATTTTGCCCTGGAAGCTGAGATTTTGGAGTTCATGAAGGGCTCGGAGAAGCCTCGGGCTTTTCCGAGCAAGAGGGACTTGGTGGAGGCTGGGAGGTTGGATTTGGTCGACGCCATTGTGAGGGAAGGTGGTTGGCTTTCGCTGGGTTGGGATTCGGGGGATGAAGAAACAGCTCAAGATAGTGGTGGCTTTAGGAATTGGGATGAAGGATATGAGAGCAGTGATTCCGATATGGTTTCTGATGATTCTTCTTCTTCTTCTGTAGTAGCGTCGTCGTCTGGTACATCACTAGAAGCCGCAACAACTGAGGTTGATACTGGAATCGAGGGTATATTGAACCGATTAGAGAAACAGAGAAATTTGACCCTTGGGTTTGTTTTGAGAGATAAAGAAGACAGTACTGGCCTCGCAAATAATGATAACAAACATGATCGGTGCCCTGAAACCTCAACTGATGCGACAGTTGGTGCAACAAGTAGAAGTATCAGACATGCTTCATCAAACCCCACTAAAGCCATTCTTAGTGATTTGGGAGGCCCACCTAATCATAGCAGATCTCTTTTAGATGCTGATGTTCAGAGAAACTCACCAAAGCCTGAAATGTGGAGAACTTGGAGCAGCCAAAGGGCTGGATCTTCAGATCTGGAATTTGAAGCTGGTGAAGTTTCTTATGATGAAATGGGAGAATCAAAGGGAGTTTTGCAAAATGAAATACTTCAAACGAAAGAGGGTGCTAATGAACCAAATGGAAGGAATGATCTAGATTCTGAGGATGAAGTGATCAATTACAAACAAGTACGAATTCGCATGCAGCACCTTGAATCCGAGCTATCCTCTGTACTTCACTCATTGAGGTCTAAAACTAGTAATGTTGCACCAAAGGAGATGGGGGTGATTACTCCTGGTCATGAAAGCTCCTCTGATGATTTGCGGAAAGTCTCTGATGCTTGGGAGTTTCAAGAAAATGAAATTATGCATGCCCAGAACAAATTACGTTCAACACGTGCAAAGCTTGCTGTTTTAGAAGGAAAGATGGCAATGGCAATAATTGATGCGCAAAAGAAAGTGGAGGGGAAACAGAATAGGGTTAATGATGCTCGTAGAGCCTTACGGCTTCTCCGAACTGCTTTAATAGTTTGGACCAATCCAGCCTCAGAAGTGCTTTTAGCAGGATCATATGATGGTTGGGCTACCCAGAGAAAGATGGAGAGGTCGAGTACAGGAATCTTCTCTGTTAGCCTTAAGTTGTATCCGGGTAGATATGAGATCAAATTCATTGTTGATGGGGAATGGCGAATTGATCCCCTACGCCCAATTGTTCGCAACAACGGATTTGAAAATAATATACTGATTATAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0001871 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0006109 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010556 GO:0010581 GO:0010675 GO:0010962 GO:0016051 GO:0019222 GO:0019252 GO:0030246 GO:0030247 GO:0031323 GO:0031326 GO:0032881 GO:0032885 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060255 GO:0065007 GO:0070492 GO:0071704 GO:0080050 GO:0080090 GO:0097367 GO:1901576 GO:2000014 GO:2000026 GO:2000112 GO:2000241 GO:2000904 GO:2001066 GO:2001070 GO:2001071

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMPK1_CBM

Protein Analysis

527

Amino Acids

58.34

Weight (kDa)

5.4

Isoelectric Point (pI)

46.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMPK1_CBM	PF16561	451 - 526	2.2e-17	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27070
fragaria_vesca	FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100
malus_domestica	MD13G1079900.v1.1 MD16G1079800.v1.1
prunus_persica	Prupe.1G266900_v2.0.a1
pyrus_communis	pycom13g06940 pycom16g06890
rosa_chinensis	RchiOBHm_Chr4g0440791
rosa_laevigata	RLG00000006153
rosa_multiflora	Rmu_sc0000424.1_g000007 Rmu_sc0000780.1_g000019 Rmu_sc0022158.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381550
rosa_rugosa	Rorug04G0327900 Rorug04G0328000
rosa_samantha	Rh4AG379800 Rh4BG392700 Rh4CG407500 Rh4DG386500
rosa_wichuraiana	Rw4G032700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1577
Acc16I	TGCGCA	1 cut(s)	1278
AccB1I	GGYRCC	1 cut(s)	657
AccI	GTMKAC	1 cut(s)	330
AccIII	TCCGGA	1 cut(s)	74
AciI	CCGC	4 cut(s)	85, 196, 519, 1153
AclWI	GGATC	3 cut(s)	862, 1402, 1517
AcsI	RAATTY	4 cut(s)	580, 869, 1023, 1493
AcuI	CTGAAG	1 cut(s)	843
AcvI	CACGTG	1 cut(s)	1226
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	5 cut(s)	505, 622, 1020, 1062, 1441
AfiI	CCNNNNNNNGG	2 cut(s)	81, 342
AflII	CTTAAG	1 cut(s)	1463
AflIII	ACRYGT	2 cut(s)	91, 1223
AgsI	TTSAA	7 cut(s)	559, 875, 941, 1043, 1181, 1221, 1559
AhlI	ACTAGT	1 cut(s)	1085
AjiI	CACGTC	2 cut(s)	58, 92
AjnI	CCWGG	2 cut(s)	231, 1123
AluBI	AGCT	6 cut(s)	239, 395, 878, 1051, 1137, 1234
AluI	AGCT	6 cut(s)	239, 395, 878, 1051, 1137, 1234
Alw26I	GTCTC	1 cut(s)	1165
AlwI	GGATC	3 cut(s)	862, 1402, 1517
Ama87I	CYCGRG	1 cut(s)	276
Aor13HI	TCCGGA	1 cut(s)	74
AoxI	GGCC	4 cut(s)	69, 101, 625, 757
ApeKI	GCWGC	2 cut(s)	840, 1033
ApoI	RAATTY	4 cut(s)	580, 869, 1023, 1493
Asp700I	GAANNNNTTC	1 cut(s)	936
AspLEI	GCGC	1 cut(s)	1279
AspS9I	GGNCC	4 cut(s)	49, 101, 758, 1362
AsuC2I	CCSGG	2 cut(s)	33, 1476
AsuHPI	GGTGA	5 cut(s)	4, 52, 801, 893, 1126
AvaI	CYCGRG	1 cut(s)	276
AvaII	GGWCC	2 cut(s)	49, 1362
BaeGI	GKGCMC	1 cut(s)	662
BanI	GGYRCC	1 cut(s)	657
BanII	GRGCYC	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	1226
BbsI	GAAGAC	1 cut(s)	621
BbvI	GCAGC	2 cut(s)	852, 1045
BccI	CCATC	6 cut(s)	30, 1102, 1249, 1397, 1420, 1499
BceAI	ACGGC	1 cut(s)	1349
BciT130I	CCWGG	2 cut(s)	233, 1125
BciVI	GTATCC	1 cut(s)	1482
BclI	TGATCA	1 cut(s)	1002
BcnI	CCSGG	2 cut(s)	33, 1476
BcoDI	GTCTC	1 cut(s)	1165
BcuI	ACTAGT	1 cut(s)	1085
BfaI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
BfmI	CTRYAG	1 cut(s)	483
BfrI	CTTAAG	1 cut(s)	1463
BfuI	GTATCC	1 cut(s)	1482
BglI	GCCNNNNNGGC	1 cut(s)	109
BglII	AGATCT	2 cut(s)	776, 862
BisI	GCNGC	3 cut(s)	519, 841, 1034
BlsI	GCNGC	3 cut(s)	520, 842, 1035
BmcAI	AGTACT	1 cut(s)	622
Bme1390I	CCNGG	4 cut(s)	33, 233, 1125, 1476
Bme18I	GGWCC	2 cut(s)	49, 1362
BmeT110I	CYCGRG	1 cut(s)	276
BmgBI	CACGTC	2 cut(s)	58, 92
BmgT120I	GGNCC	4 cut(s)	49, 101, 758, 1362
BmiI	GGNNCC	1 cut(s)	659
BmrFI	CCNGG	4 cut(s)	33, 233, 1125, 1476
BmsI	GCATC	5 cut(s)	667, 778, 1156, 1264, 1306
BpiI	GAAGAC	1 cut(s)	621
BplI	GAGNNNNNCTC	2 cut(s)	1040, 1072
Bpu10I	CCTNAGC	1 cut(s)	113
BpuEI	CTTGAG	1 cut(s)	381
BpuMI	CCSGG	2 cut(s)	33, 1476
BsaAI	YACGTR	1 cut(s)	1226
BsaHI	GRCGYC	1 cut(s)	333
BsaJI	CCNNGG	4 cut(s)	31, 231, 275, 589
BsaWI	WCCGGW	2 cut(s)	46, 74
BsaXI	ACNNNNNCTCC	2 cut(s)	1323, 1353
Bsc4I	CCNNNNNNNGG	2 cut(s)	81, 342
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	2 cut(s)	544, 628
Bse3DI	GCAATG	1 cut(s)	1266
BseAI	TCCGGA	1 cut(s)	74
BseBI	CCWGG	2 cut(s)	233, 1125
BseDI	CCNNGG	4 cut(s)	31, 231, 275, 589
BseGI	GGATG	3 cut(s)	388, 430, 1000
BseLI	CCNNNNNNNGG	2 cut(s)	81, 342
BseMI	GCAATG	1 cut(s)	1266
BseMII	CTCAG	4 cut(s)	231, 519, 981, 1389
BseNI	ACTGG	2 cut(s)	544, 628
BseRI	GAGGAG	1 cut(s)	1129
BseSI	GKGCMC	1 cut(s)	662
BseXI	GCAGC	2 cut(s)	852, 1045
BseYI	CCCAGC	2 cut(s)	311, 364
BshFI	GGCC	4 cut(s)	71, 103, 627, 759
BshNI	GGYRCC	1 cut(s)	657
BsiHKCI	CYCGRG	1 cut(s)	276
BsiSI	CCGG	5 cut(s)	33, 47, 75, 104, 1475
BslFI	GGGAC	3 cut(s)	14, 102, 311
BslI	CCNNNNNNNGG	2 cut(s)	81, 342
BsmAI	GTCTC	1 cut(s)	1165
BsmFI	GGGAC	3 cut(s)	14, 102, 311
BsnI	GGCC	4 cut(s)	71, 103, 627, 759
BsoBI	CYCGRG	1 cut(s)	276
Bsp1286I	GDGCHC	2 cut(s)	266, 662
Bsp13I	TCCGGA	1 cut(s)	74
Bsp143I	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
BspACI	CCGC	4 cut(s)	85, 196, 519, 1153
BspANI	GGCC	4 cut(s)	71, 103, 627, 759
BspCNI	CTCAG	4 cut(s)	232, 520, 982, 1388
BspEI	TCCGGA	1 cut(s)	74
BspHI	TCATGA	2 cut(s)	255, 1129
BspLI	GGNNCC	1 cut(s)	659
BspPI	GGATC	3 cut(s)	862, 1402, 1517
BspT107I	GGYRCC	1 cut(s)	657
BspTI	CTTAAG	1 cut(s)	1463
BsrDI	GCAATG	1 cut(s)	1266
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	2 cut(s)	544, 628
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	4 cut(s)	31, 231, 275, 589
BssMI	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
BssNI	GRCGYC	1 cut(s)	333
BssT1I	CCWWGG	1 cut(s)	589
Bst2UI	CCWGG	2 cut(s)	233, 1125
Bst4CI	ACNGT	2 cut(s)	620, 685
BstACI	GRCGYC	1 cut(s)	333
BstAFI	CTTAAG	1 cut(s)	1463
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstBAI	YACGTR	1 cut(s)	1226
BstC8I	GCNNGC	5 cut(s)	6, 105, 1031, 1200, 1236
BstDEI	CTNAG	6 cut(s)	113, 240, 528, 743, 990, 1375
BstF5I	GGATG	3 cut(s)	388, 430, 1000
BstHHI	GCGC	1 cut(s)	1279
BstKTI	GATC	9 cut(s)	655, 779, 857, 865, 982, 1005, 1397, 1491, 1525
BstMAI	GTCTC	1 cut(s)	1165
BstMBI	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
BstMWI	GCNNNNNNNGC	4 cut(s)	109, 236, 1235, 1325
BstNI	CCWGG	2 cut(s)	233, 1125
BstNSI	RCATGY	3 cut(s)	716, 1033, 1202
BstSCI	CCNGG	4 cut(s)	31, 231, 1123, 1474
BstSFI	CTRYAG	1 cut(s)	483
BstSLI	GKGCMC	1 cut(s)	662
BstV1I	GCAGC	2 cut(s)	852, 1045
BstV2I	GAAGAC	1 cut(s)	621
BstX2I	RGATCY	3 cut(s)	776, 854, 862
BstXI	CCANNNNNNTGG	1 cut(s)	851
BstYI	RGATCY	3 cut(s)	776, 854, 862
BsuI	GTATCC	1 cut(s)	1482
BsuRI	GGCC	4 cut(s)	71, 103, 627, 759
BtrI	CACGTC	2 cut(s)	58, 92
BtsCI	GGATG	3 cut(s)	388, 430, 1000
BtsI	GCAGTG	1 cut(s)	448
BtsIMutI	CAGTG	1 cut(s)	448
Cac8I	GCNNGC	5 cut(s)	6, 105, 1031, 1200, 1236
CciI	TCATGA	2 cut(s)	255, 1129
CfoI	GCGC	1 cut(s)	1279
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	4 cut(s)	49, 101, 758, 1362
CseI	GACGC	2 cut(s)	341, 480
Csp6I	GTAC	5 cut(s)	504, 621, 1019, 1061, 1440
CviAII	CATG	6 cut(s)	256, 650, 713, 1030, 1130, 1199
CviQI	GTAC	5 cut(s)	504, 621, 1019, 1061, 1440
DdeI	CTNAG	6 cut(s)	113, 240, 528, 743, 990, 1375
DpnI	GATC	9 cut(s)	654, 778, 856, 864, 981, 1004, 1396, 1490, 1524
DpnII	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
Eco130I	CCWWGG	1 cut(s)	589
Eco24I	GRGCYC	1 cut(s)	266
Eco47I	GGWCC	2 cut(s)	49, 1362
Eco57I	CTGAAG	1 cut(s)	843
Eco72I	CACGTG	1 cut(s)	1226
Eco88I	CYCGRG	1 cut(s)	276
EcoRI	GAATTC	1 cut(s)	1023
EcoRII	CCWGG	2 cut(s)	231, 1123
EcoT14I	CCWWGG	1 cut(s)	589
EcoT22I	ATGCAT	1 cut(s)	1200
EcoT38I	GRGCYC	1 cut(s)	266
ErhI	CCWWGG	1 cut(s)	589
FaeI	CATG	6 cut(s)	259, 653, 716, 1033, 1133, 1202
FalI	AAGNNNNNCTT	4 cut(s)	284, 316, 726, 758
FaqI	GGGAC	3 cut(s)	14, 102, 311
FatI	CATG	6 cut(s)	255, 649, 712, 1029, 1129, 1198
FauI	CCCGC	1 cut(s)	78
FauNDI	CATATG	1 cut(s)	1399
FbaI	TGATCA	1 cut(s)	1002
FblI	GTMKAC	1 cut(s)	330
Fnu4HI	GCNGC	3 cut(s)	519, 841, 1034
FokI	GGATG	3 cut(s)	395, 437, 1007
FriOI	GRGCYC	1 cut(s)	266
Fsp4HI	GCNGC	3 cut(s)	519, 841, 1034
FspBI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
FspI	TGCGCA	1 cut(s)	1278
GlaI	GCGC	1 cut(s)	1278
GluI	GCNGC	3 cut(s)	519, 841, 1034
GsaI	CCCAGC	2 cut(s)	315, 368
HaeIII	GGCC	4 cut(s)	71, 103, 627, 759
HapII	CCGG	5 cut(s)	33, 47, 75, 104, 1475
HgaI	GACGC	2 cut(s)	341, 480
HhaI	GCGC	1 cut(s)	1279
Hin1I	GRCGYC	1 cut(s)	333
Hin1II	CATG	6 cut(s)	259, 653, 716, 1033, 1133, 1202
Hin6I	GCGC	1 cut(s)	1277
HinP1I	GCGC	1 cut(s)	1277
HincII	GTYRAC	1 cut(s)	331
HindII	GTYRAC	1 cut(s)	331
HindIII	AAGCTT	1 cut(s)	1232
HinfI	GANTC	9 cut(s)	206, 374, 446, 467, 543, 908, 986, 1043, 1446
HpaII	CCGG	5 cut(s)	33, 47, 75, 104, 1475
HphI	GGTGA	5 cut(s)	4, 52, 801, 893, 1126
Hpy166II	GTNNAC	1 cut(s)	331
Hpy188III	TCNNGA	7 cut(s)	75, 256, 398, 866, 983, 1130, 1181
Hpy8I	GTNNAC	1 cut(s)	331
Hpy99I	CGWCG	3 cut(s)	335, 496, 499
HpyAV	CCTTC	8 cut(s)	19, 167, 212, 253, 341, 422, 966, 1241
HpyCH4III	ACNGT	2 cut(s)	620, 685
HpyCH4IV	ACGT	4 cut(s)	57, 91, 1216, 1225
HpyCH4V	TGCA	6 cut(s)	692, 925, 1033, 1097, 1198, 1229
HpyF10VI	GCNNNNNNNGC	4 cut(s)	109, 236, 1235, 1325
HpyF3I	CTNAG	6 cut(s)	113, 240, 528, 743, 990, 1375
HpySE526I	ACGT	4 cut(s)	57, 91, 1216, 1225
Hsp92I	GRCGYC	1 cut(s)	333
Hsp92II	CATG	6 cut(s)	259, 653, 716, 1033, 1133, 1202
HspAI	GCGC	1 cut(s)	1277
Kpn2I	TCCGGA	1 cut(s)	74
KroI	GCCGGC	1 cut(s)	103
KroNI	GCCGGC	1 cut(s)	105
Ksp22I	TGATCA	1 cut(s)	1002
Kzo9I	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
LmnI	GCTCC	2 cut(s)	837, 1142
Lsp1109I	GCAGC	2 cut(s)	852, 1045
LweI	GCATC	5 cut(s)	667, 778, 1156, 1264, 1306
MaeI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
MaeII	ACGT	4 cut(s)	57, 91, 1216, 1225
MaeIII	GTNAC	1 cut(s)	58
MalI	GATC	9 cut(s)	654, 778, 856, 864, 981, 1004, 1396, 1490, 1524
MboI	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
MboII	GAAGA	8 cut(s)	398, 462, 465, 468, 471, 626, 849, 1441
MfeI	CAATTG	1 cut(s)	1536
MflI	RGATCY	3 cut(s)	776, 854, 862
MhlI	GDGCHC	2 cut(s)	266, 662
MmeI	TCCRAC	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	1200
MroI	TCCGGA	1 cut(s)	74
MroNI	GCCGGC	1 cut(s)	103
MroXI	GAANNNNTTC	1 cut(s)	936
MseI	TTAA	3 cut(s)	1311, 1352, 1464
MspCI	CTTAAG	1 cut(s)	1463
MspI	CCGG	5 cut(s)	33, 47, 75, 104, 1475
MspR9I	CCNGG	4 cut(s)	33, 233, 1125, 1476
MunI	CAATTG	1 cut(s)	1536
MvaI	CCWGG	2 cut(s)	233, 1125
MwoI	GCNNNNNNNGC	4 cut(s)	109, 236, 1235, 1325
NaeI	GCCGGC	1 cut(s)	105
NciI	CCSGG	2 cut(s)	33, 1476
NdeI	CATATG	1 cut(s)	1399
NdeII	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
NgoMIV	GCCGGC	1 cut(s)	103
NlaIII	CATG	6 cut(s)	259, 653, 716, 1033, 1133, 1202
NlaIV	GGNNCC	1 cut(s)	659
NmuCI	GTSAC	1 cut(s)	58
NsbI	TGCGCA	1 cut(s)	1278
NsiI	ATGCAT	1 cut(s)	1200
NspI	RCATGY	3 cut(s)	716, 1033, 1202
PaeI	GCATGC	2 cut(s)	1033, 1202
PagI	TCATGA	2 cut(s)	255, 1129
PcsI	WCGNNNNNNNCGW	2 cut(s)	1222, 1339
PdiI	GCCGGC	1 cut(s)	105
PdmI	GAANNNNTTC	1 cut(s)	936
PfeI	GAWTC	9 cut(s)	206, 374, 446, 467, 543, 908, 986, 1043, 1446
PkrI	GCNGC	3 cut(s)	520, 842, 1035
PmaCI	CACGTG	1 cut(s)	1226
PmlI	CACGTG	1 cut(s)	1226
Ppu21I	YACGTR	1 cut(s)	1226
PsiI	TTATAA	1 cut(s)	1577
Psp6I	CCWGG	2 cut(s)	231, 1123
PspCI	CACGTG	1 cut(s)	1226
PspFI	CCCAGC	2 cut(s)	311, 364
PspGI	CCWGG	2 cut(s)	231, 1123
PspN4I	GGNNCC	1 cut(s)	659
PspPI	GGNCC	4 cut(s)	49, 101, 758, 1362
PsuI	RGATCY	3 cut(s)	776, 854, 862
RsaI	GTAC	5 cut(s)	505, 622, 1020, 1062, 1441
RsaNI	GTAC	5 cut(s)	504, 621, 1019, 1061, 1440
SalI	GTCGAC	1 cut(s)	329
SaqAI	TTAA	3 cut(s)	1311, 1352, 1464
SatI	GCNGC	3 cut(s)	519, 841, 1034
Sau3AI	GATC	9 cut(s)	652, 776, 854, 862, 979, 1002, 1394, 1488, 1522
Sau96I	GGNCC	4 cut(s)	49, 101, 758, 1362
ScaI	AGTACT	1 cut(s)	622
ScrFI	CCNGG	4 cut(s)	33, 233, 1125, 1476
SduI	GDGCHC	2 cut(s)	266, 662
SfaNI	GCATC	5 cut(s)	667, 778, 1156, 1264, 1306
SfcI	CTRYAG	1 cut(s)	483
SinI	GGWCC	2 cut(s)	49, 1362
SmlI	CTYRAG	2 cut(s)	396, 1463
SmoI	CTYRAG	2 cut(s)	396, 1463
SpeI	ACTAGT	1 cut(s)	1085
SphI	GCATGC	2 cut(s)	1033, 1202
SsiI	CCGC	4 cut(s)	85, 196, 519, 1153
SspMI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
StyD4I	CCNGG	4 cut(s)	31, 231, 1123, 1474
StyI	CCWWGG	1 cut(s)	589
TaaI	ACNGT	2 cut(s)	620, 685
TaiI	ACGT	4 cut(s)	60, 94, 1219, 1228
TaqI	TCGA	3 cut(s)	330, 546, 1436
TatI	WGTACW	3 cut(s)	620, 1060, 1439
TauI	GCSGC	1 cut(s)	521
TfiI	GAWTC	9 cut(s)	206, 374, 446, 467, 543, 908, 986, 1043, 1446
Tru1I	TTAA	3 cut(s)	1311, 1352, 1464
Tru9I	TTAA	3 cut(s)	1311, 1352, 1464
TscAI	CASTG	1 cut(s)	448
TseFI	GTSAC	1 cut(s)	58
TseI	GCWGC	2 cut(s)	840, 1033
Tsp45I	GTSAC	1 cut(s)	58
TspGWI	ACGGA	1 cut(s)	1566
TspRI	CASTG	1 cut(s)	448
Vha464I	CTTAAG	1 cut(s)	1463
VpaK11BI	GGWCC	2 cut(s)	49, 1362
XapI	RAATTY	4 cut(s)	580, 869, 1023, 1493
XbaI	TCTAGA	1 cut(s)	982
XceI	RCATGY	3 cut(s)	716, 1033, 1202
XmiI	GTMKAC	1 cut(s)	330
XmnI	GAANNNNTTC	1 cut(s)	936
XspI	CTAG	5 cut(s)	26, 149, 512, 983, 1086
ZrmI	AGTACT	1 cut(s)	622
Zsp2I	ATGCAT	1 cut(s)	1200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.