Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0007960

Physical Location & Seq

Genomic Coordinates Reverse (-)

60322876 .. 60326135

Gene Structure 3260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG386500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGCTCGCCTTCACCCACTTCCATCTAGTCCCCGGTTTTTTTCCTCCGGTCCTCCACGTCACCAATTCGGCCGCCGGAATGAGGCGGGGACGTGTTCTTGGGCCGGCGAGGCTTAGGGTGGTGGGAGAAAGCAGGGTTTCTGTTGTTCTAGGGTTTTGGGAGGGGAGGAAAGAAGGGGGTTGTGGGTTTGTGAGGCGGTGTAGGGATTCGGATTTGGAAGGGGATTTTGCCCTGGAAGCTGAGATTTTGGAGTTCATGAAGGGCTCGGAGAAGCCTCGGGCTTTTCCGAGCAAGAGGGACTTGGTGGAGGCTGGGAGGTTGGATTTGGTCGACGCCATTGTGAGGGAAGGTGGTTGGCTTTCGCTGGGTTGGGATTTGGGGGATGAAGAAACAGCTCAAGATAGTGGTGGCTTTAGGAATTGGGATGAAGGATATGAGAGCAGTGATTCCGATATGGTTTCTGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTAGTAGCGTCGTCGTCTGGTACATCACTAGAAGCCGCAACAACTGAGGTTGATACTGGAATCGAGGGTATATTGAACCGATTAGAGAAACAGAGAAATTTGACCCTTGGGTTTGTTTTGAGAGATAAAGAAGACAGTACTGGCCTCGCAAATAATGATAACAAACATGATCGGTGCCCTGAAACCTCAACTGATGCGACAGTTGGTGCAACAAGTAGAAGTATCAGACATGCTTCATCAAACCCCACTAAAGCCATTCTTAGTGATTTGGGAGGCCCACCTAATCATAGCAGATCTCTTTTAGATGCTGATGTTCAGAGAAACTCACCAAAGCCTGAAATGTGGAGAACTTGGAGCAGCCAAAGGGCTGGATCTTCAGATCTGGAATTTGAAGCTGGTGAAGTTTCTTATGATGAAATGGGAGAATCAAAGGGAGTTTTGCAAAATGAAATACTTCAAACGAAAGAGGGTGCTAATGAACCAAATGGAAGGAATGATCTAGATTCTGAGGATGAAGTGATCAATTACAAACAAGTACGAATTCGCATGCAGCACCTTGAATCCGAGCTATCCTCTGTACTTCACTCATTGAGGTCTAAAACTAGTAATGTTGCACCAAAGGAGATGGGGGTGATTACTCCTGGTCATGAAAGCTCCTCTGATGATTTGCGGAAAGTCTCTGATGCTTGGGAGTTTCAAGAAAATGAAATTATGCATGCCCAGAACAAATTACGTTCAACACGTGCAAAGCTTGCTGTTTTAGAAGGAAAGATGGCAATGGCAATAATTGATGCGCAAAAGAAAGTGGAGGGGAAACAGAATAGGGTTAATGATGCTCGTAGAGCCTTACGGCTTCTCCGAACTGCTTTAATAGTTTGGACCAATCCAGCCTCAGAAGTGCTTTTAGCAGGATCATATGATGGTTGGGCTACCCAGAGAAAGATGGAGAGGTCGAGTACAGGAATCTTCTCTGTTAGCCTTAAGTTGTATCCGGGTAGATATGAGATCAAATTCATTGTTGATGGGGAATGGCGAATTGATCCCCTACGCCCAATTGTTCGCAACAACGGATTTGAAAATAATATACTGATTATAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0001871 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0006109 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010556 GO:0010581 GO:0010675 GO:0010962 GO:0016051 GO:0019222 GO:0019252 GO:0030246 GO:0030247 GO:0031323 GO:0031326 GO:0032881 GO:0032885 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060255 GO:0065007 GO:0070492 GO:0071704 GO:0080050 GO:0080090 GO:0097367 GO:1901576 GO:2000014 GO:2000026 GO:2000112 GO:2000241 GO:2000904 GO:2001066 GO:2001070 GO:2001071

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMPK1_CBM

Protein Analysis

531

Amino Acids

58.67

Weight (kDa)

5.46

Isoelectric Point (pI)

47.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMPK1_CBM	PF16561	455 - 530	2.2e-17	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27070
fragaria_vesca	FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100 FvH4_4g32100
malus_domestica	MD13G1079900.v1.1 MD16G1079800.v1.1
prunus_persica	Prupe.1G266900_v2.0.a1
pyrus_communis	pycom13g06940 pycom16g06890
rosa_chinensis	RchiOBHm_Chr4g0440791
rosa_laevigata	RLG00000006153
rosa_multiflora	Rmu_sc0000424.1_g000007 Rmu_sc0000780.1_g000019 Rmu_sc0022158.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381550
rosa_rugosa	Rorug04G0327900 Rorug04G0328000
rosa_samantha	Rh4AG379800 Rh4BG392700 Rh4CG407500 Rh4DG386500
rosa_wichuraiana	Rw4G032700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1589
Acc16I	TGCGCA	1 cut(s)	1290
AccB1I	GGYRCC	1 cut(s)	669
AccI	GTMKAC	1 cut(s)	330
AciI	CCGC	5 cut(s)	72, 85, 196, 531, 1165
AclWI	GGATC	3 cut(s)	874, 1414, 1529
AcoI	YGGCCR	1 cut(s)	69
AcsI	RAATTY	4 cut(s)	592, 881, 1035, 1505
AcuI	CTGAAG	1 cut(s)	855
AcvI	CACGTG	1 cut(s)	1238
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	5 cut(s)	517, 634, 1032, 1074, 1453
AfiI	CCNNNNNNNGG	2 cut(s)	81, 342
AflII	CTTAAG	1 cut(s)	1475
AflIII	ACRYGT	2 cut(s)	91, 1235
AgsI	TTSAA	7 cut(s)	571, 887, 953, 1055, 1193, 1233, 1571
AhlI	ACTAGT	1 cut(s)	1097
AjiI	CACGTC	2 cut(s)	58, 92
AjnI	CCWGG	2 cut(s)	231, 1135
AluBI	AGCT	6 cut(s)	239, 395, 890, 1063, 1149, 1246
AluI	AGCT	6 cut(s)	239, 395, 890, 1063, 1149, 1246
Alw26I	GTCTC	1 cut(s)	1177
AlwI	GGATC	3 cut(s)	874, 1414, 1529
Ama87I	CYCGRG	1 cut(s)	276
AoxI	GGCC	4 cut(s)	69, 101, 637, 769
ApeKI	GCWGC	2 cut(s)	852, 1045
ApoI	RAATTY	4 cut(s)	592, 881, 1035, 1505
Asp700I	GAANNNNTTC	1 cut(s)	948
AspLEI	GCGC	1 cut(s)	1291
AspS9I	GGNCC	4 cut(s)	49, 101, 770, 1374
AsuC2I	CCSGG	2 cut(s)	33, 1488
AsuHPI	GGTGA	5 cut(s)	4, 52, 813, 905, 1138
AvaI	CYCGRG	1 cut(s)	276
AvaII	GGWCC	2 cut(s)	49, 1374
BaeGI	GKGCMC	1 cut(s)	674
BanI	GGYRCC	1 cut(s)	669
BanII	GRGCYC	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	1238
BbsI	GAAGAC	1 cut(s)	633
BbvI	GCAGC	2 cut(s)	864, 1057
BccI	CCATC	6 cut(s)	30, 1114, 1261, 1409, 1432, 1511
BceAI	ACGGC	1 cut(s)	1361
BciT130I	CCWGG	2 cut(s)	233, 1137
BciVI	GTATCC	1 cut(s)	1494
BclI	TGATCA	1 cut(s)	1014
BcnI	CCSGG	2 cut(s)	33, 1488
BcoDI	GTCTC	1 cut(s)	1177
BcuI	ACTAGT	1 cut(s)	1097
BfaI	CTAG	5 cut(s)	26, 149, 524, 995, 1098
BfmI	CTRYAG	1 cut(s)	495
BfrI	CTTAAG	1 cut(s)	1475
BfuI	GTATCC	1 cut(s)	1494
BglI	GCCNNNNNGGC	1 cut(s)	109
BglII	AGATCT	2 cut(s)	788, 874
BisI	GCNGC	4 cut(s)	72, 531, 853, 1046
BlsI	GCNGC	4 cut(s)	73, 532, 854, 1047
BmcAI	AGTACT	1 cut(s)	634
Bme1390I	CCNGG	4 cut(s)	33, 233, 1137, 1488
Bme18I	GGWCC	2 cut(s)	49, 1374
BmeT110I	CYCGRG	1 cut(s)	276
BmgBI	CACGTC	2 cut(s)	58, 92
BmgT120I	GGNCC	4 cut(s)	49, 101, 770, 1374
BmiI	GGNNCC	1 cut(s)	671
BmrFI	CCNGG	4 cut(s)	33, 233, 1137, 1488
BmsI	GCATC	5 cut(s)	679, 790, 1168, 1276, 1318
BpiI	GAAGAC	1 cut(s)	633
BplI	GAGNNNNNCTC	2 cut(s)	1052, 1084
Bpu10I	CCTNAGC	1 cut(s)	113
BpuEI	CTTGAG	1 cut(s)	381
BpuMI	CCSGG	2 cut(s)	33, 1488
BsaAI	YACGTR	1 cut(s)	1238
BsaHI	GRCGYC	1 cut(s)	333
BsaJI	CCNNGG	4 cut(s)	31, 231, 275, 601
BsaWI	WCCGGW	1 cut(s)	46
BsaXI	ACNNNNNCTCC	2 cut(s)	1335, 1365
Bsc4I	CCNNNNNNNGG	2 cut(s)	81, 342
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	2 cut(s)	556, 640
Bse3DI	GCAATG	1 cut(s)	1278
BseBI	CCWGG	2 cut(s)	233, 1137
BseDI	CCNNGG	4 cut(s)	31, 231, 275, 601
BseGI	GGATG	3 cut(s)	388, 430, 1012
BseLI	CCNNNNNNNGG	2 cut(s)	81, 342
BseMI	GCAATG	1 cut(s)	1278
BseMII	CTCAG	4 cut(s)	231, 531, 993, 1401
BseNI	ACTGG	2 cut(s)	556, 640
BseRI	GAGGAG	1 cut(s)	1141
BseSI	GKGCMC	1 cut(s)	674
BseX3I	CGGCCG	1 cut(s)	69
BseXI	GCAGC	2 cut(s)	864, 1057
BseYI	CCCAGC	2 cut(s)	311, 364
Bsh1285I	CGRYCG	1 cut(s)	72
BshFI	GGCC	4 cut(s)	71, 103, 639, 771
BshNI	GGYRCC	1 cut(s)	669
BsiEI	CGRYCG	1 cut(s)	72
BsiHKCI	CYCGRG	1 cut(s)	276
BsiSI	CCGG	5 cut(s)	33, 47, 75, 104, 1487
BslFI	GGGAC	3 cut(s)	14, 102, 311
BslI	CCNNNNNNNGG	2 cut(s)	81, 342
BsmAI	GTCTC	1 cut(s)	1177
BsmFI	GGGAC	3 cut(s)	14, 102, 311
BsnI	GGCC	4 cut(s)	71, 103, 639, 771
BsoBI	CYCGRG	1 cut(s)	276
Bsp1286I	GDGCHC	2 cut(s)	266, 674
Bsp143I	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
BspACI	CCGC	5 cut(s)	72, 85, 196, 531, 1165
BspANI	GGCC	4 cut(s)	71, 103, 639, 771
BspCNI	CTCAG	4 cut(s)	232, 532, 994, 1400
BspHI	TCATGA	2 cut(s)	255, 1141
BspLI	GGNNCC	1 cut(s)	671
BspPI	GGATC	3 cut(s)	874, 1414, 1529
BspT107I	GGYRCC	1 cut(s)	669
BspTI	CTTAAG	1 cut(s)	1475
BsrDI	GCAATG	1 cut(s)	1278
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	2 cut(s)	556, 640
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	4 cut(s)	31, 231, 275, 601
BssMI	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
BssNI	GRCGYC	1 cut(s)	333
BssT1I	CCWWGG	1 cut(s)	601
Bst2UI	CCWGG	2 cut(s)	233, 1137
Bst4CI	ACNGT	2 cut(s)	632, 697
BstACI	GRCGYC	1 cut(s)	333
BstAFI	CTTAAG	1 cut(s)	1475
BstAPI	GCANNNNNTGC	1 cut(s)	1247
BstBAI	YACGTR	1 cut(s)	1238
BstC8I	GCNNGC	5 cut(s)	6, 105, 1043, 1212, 1248
BstDEI	CTNAG	6 cut(s)	113, 240, 540, 755, 1002, 1387
BstF5I	GGATG	3 cut(s)	388, 430, 1012
BstHHI	GCGC	1 cut(s)	1291
BstKTI	GATC	9 cut(s)	667, 791, 869, 877, 994, 1017, 1409, 1503, 1537
BstMAI	GTCTC	1 cut(s)	1177
BstMBI	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
BstMCI	CGRYCG	1 cut(s)	72
BstMWI	GCNNNNNNNGC	4 cut(s)	109, 236, 1247, 1337
BstNI	CCWGG	2 cut(s)	233, 1137
BstNSI	RCATGY	3 cut(s)	728, 1045, 1214
BstSCI	CCNGG	4 cut(s)	31, 231, 1135, 1486
BstSFI	CTRYAG	1 cut(s)	495
BstSLI	GKGCMC	1 cut(s)	674
BstV1I	GCAGC	2 cut(s)	864, 1057
BstV2I	GAAGAC	1 cut(s)	633
BstX2I	RGATCY	3 cut(s)	788, 866, 874
BstXI	CCANNNNNNTGG	1 cut(s)	863
BstYI	RGATCY	3 cut(s)	788, 866, 874
BstZI	CGGCCG	1 cut(s)	69
BsuI	GTATCC	1 cut(s)	1494
BsuRI	GGCC	4 cut(s)	71, 103, 639, 771
BtrI	CACGTC	2 cut(s)	58, 92
BtsCI	GGATG	3 cut(s)	388, 430, 1012
BtsI	GCAGTG	1 cut(s)	448
BtsIMutI	CAGTG	1 cut(s)	448
Cac8I	GCNNGC	5 cut(s)	6, 105, 1043, 1212, 1248
CciI	TCATGA	2 cut(s)	255, 1141
CfoI	GCGC	1 cut(s)	1291
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	4 cut(s)	49, 101, 770, 1374
CseI	GACGC	2 cut(s)	341, 492
Csp6I	GTAC	5 cut(s)	516, 633, 1031, 1073, 1452
CviAII	CATG	6 cut(s)	256, 662, 725, 1042, 1142, 1211
CviQI	GTAC	5 cut(s)	516, 633, 1031, 1073, 1452
DdeI	CTNAG	6 cut(s)	113, 240, 540, 755, 1002, 1387
DpnI	GATC	9 cut(s)	666, 790, 868, 876, 993, 1016, 1408, 1502, 1536
DpnII	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
EaeI	YGGCCR	1 cut(s)	69
EagI	CGGCCG	1 cut(s)	69
EclXI	CGGCCG	1 cut(s)	69
Eco130I	CCWWGG	1 cut(s)	601
Eco24I	GRGCYC	1 cut(s)	266
Eco47I	GGWCC	2 cut(s)	49, 1374
Eco52I	CGGCCG	1 cut(s)	69
Eco57I	CTGAAG	1 cut(s)	855
Eco72I	CACGTG	1 cut(s)	1238
Eco88I	CYCGRG	1 cut(s)	276
EcoRI	GAATTC	1 cut(s)	1035
EcoRII	CCWGG	2 cut(s)	231, 1135
EcoT14I	CCWWGG	1 cut(s)	601
EcoT22I	ATGCAT	1 cut(s)	1212
EcoT38I	GRGCYC	1 cut(s)	266
ErhI	CCWWGG	1 cut(s)	601
FaeI	CATG	6 cut(s)	259, 665, 728, 1045, 1145, 1214
FalI	AAGNNNNNCTT	4 cut(s)	284, 316, 738, 770
FaqI	GGGAC	3 cut(s)	14, 102, 311
FatI	CATG	6 cut(s)	255, 661, 724, 1041, 1141, 1210
FauI	CCCGC	1 cut(s)	78
FauNDI	CATATG	1 cut(s)	1411
FbaI	TGATCA	1 cut(s)	1014
FblI	GTMKAC	1 cut(s)	330
Fnu4HI	GCNGC	4 cut(s)	72, 531, 853, 1046
FokI	GGATG	3 cut(s)	395, 437, 1019
FriOI	GRGCYC	1 cut(s)	266
Fsp4HI	GCNGC	4 cut(s)	72, 531, 853, 1046
FspBI	CTAG	5 cut(s)	26, 149, 524, 995, 1098
FspI	TGCGCA	1 cut(s)	1290
GlaI	GCGC	1 cut(s)	1290
GluI	GCNGC	4 cut(s)	72, 531, 853, 1046
GsaI	CCCAGC	2 cut(s)	315, 368
HaeIII	GGCC	4 cut(s)	71, 103, 639, 771
HapII	CCGG	5 cut(s)	33, 47, 75, 104, 1487
HgaI	GACGC	2 cut(s)	341, 492
HhaI	GCGC	1 cut(s)	1291
Hin1I	GRCGYC	1 cut(s)	333
Hin1II	CATG	6 cut(s)	259, 665, 728, 1045, 1145, 1214
Hin6I	GCGC	1 cut(s)	1289
HinP1I	GCGC	1 cut(s)	1289
HincII	GTYRAC	1 cut(s)	331
HindII	GTYRAC	1 cut(s)	331
HindIII	AAGCTT	1 cut(s)	1244
HinfI	GANTC	8 cut(s)	206, 446, 464, 555, 920, 998, 1055, 1458
HpaII	CCGG	5 cut(s)	33, 47, 75, 104, 1487
HphI	GGTGA	5 cut(s)	4, 52, 813, 905, 1138
Hpy166II	GTNNAC	1 cut(s)	331
Hpy188III	TCNNGA	6 cut(s)	256, 398, 878, 995, 1142, 1193
Hpy8I	GTNNAC	1 cut(s)	331
Hpy99I	CGWCG	3 cut(s)	335, 508, 511
HpyAV	CCTTC	8 cut(s)	19, 167, 212, 253, 341, 422, 978, 1253
HpyCH4III	ACNGT	2 cut(s)	632, 697
HpyCH4IV	ACGT	4 cut(s)	57, 91, 1228, 1237
HpyCH4V	TGCA	6 cut(s)	704, 937, 1045, 1109, 1210, 1241
HpyF10VI	GCNNNNNNNGC	4 cut(s)	109, 236, 1247, 1337
HpyF3I	CTNAG	6 cut(s)	113, 240, 540, 755, 1002, 1387
HpySE526I	ACGT	4 cut(s)	57, 91, 1228, 1237
Hsp92I	GRCGYC	1 cut(s)	333
Hsp92II	CATG	6 cut(s)	259, 665, 728, 1045, 1145, 1214
HspAI	GCGC	1 cut(s)	1289
KroI	GCCGGC	1 cut(s)	103
KroNI	GCCGGC	1 cut(s)	105
Ksp22I	TGATCA	1 cut(s)	1014
Kzo9I	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
LmnI	GCTCC	2 cut(s)	849, 1154
Lsp1109I	GCAGC	2 cut(s)	864, 1057
LweI	GCATC	5 cut(s)	679, 790, 1168, 1276, 1318
MaeI	CTAG	5 cut(s)	26, 149, 524, 995, 1098
MaeII	ACGT	4 cut(s)	57, 91, 1228, 1237
MaeIII	GTNAC	1 cut(s)	58
MalI	GATC	9 cut(s)	666, 790, 868, 876, 993, 1016, 1408, 1502, 1536
MboI	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
MfeI	CAATTG	1 cut(s)	1548
MflI	RGATCY	3 cut(s)	788, 866, 874
MhlI	GDGCHC	2 cut(s)	266, 674
MmeI	TCCRAC	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	1212
MroNI	GCCGGC	1 cut(s)	103
MroXI	GAANNNNTTC	1 cut(s)	948
MseI	TTAA	3 cut(s)	1323, 1364, 1476
MspCI	CTTAAG	1 cut(s)	1475
MspI	CCGG	5 cut(s)	33, 47, 75, 104, 1487
MspR9I	CCNGG	4 cut(s)	33, 233, 1137, 1488
MunI	CAATTG	1 cut(s)	1548
MvaI	CCWGG	2 cut(s)	233, 1137
MwoI	GCNNNNNNNGC	4 cut(s)	109, 236, 1247, 1337
NaeI	GCCGGC	1 cut(s)	105
NciI	CCSGG	2 cut(s)	33, 1488
NdeI	CATATG	1 cut(s)	1411
NdeII	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
NgoMIV	GCCGGC	1 cut(s)	103
NlaIII	CATG	6 cut(s)	259, 665, 728, 1045, 1145, 1214
NlaIV	GGNNCC	1 cut(s)	671
NmuCI	GTSAC	1 cut(s)	58
NsbI	TGCGCA	1 cut(s)	1290
NsiI	ATGCAT	1 cut(s)	1212
NspI	RCATGY	3 cut(s)	728, 1045, 1214
PaeI	GCATGC	2 cut(s)	1045, 1214
PagI	TCATGA	2 cut(s)	255, 1141
PcsI	WCGNNNNNNNCGW	2 cut(s)	1234, 1351
PdiI	GCCGGC	1 cut(s)	105
PdmI	GAANNNNTTC	1 cut(s)	948
PfeI	GAWTC	8 cut(s)	206, 446, 464, 555, 920, 998, 1055, 1458
PkrI	GCNGC	4 cut(s)	73, 532, 854, 1047
PmaCI	CACGTG	1 cut(s)	1238
PmlI	CACGTG	1 cut(s)	1238
Ppu21I	YACGTR	1 cut(s)	1238
PsiI	TTATAA	1 cut(s)	1589
Psp6I	CCWGG	2 cut(s)	231, 1135
PspCI	CACGTG	1 cut(s)	1238
PspFI	CCCAGC	2 cut(s)	311, 364
PspGI	CCWGG	2 cut(s)	231, 1135
PspN4I	GGNNCC	1 cut(s)	671
PspPI	GGNCC	4 cut(s)	49, 101, 770, 1374
PsuI	RGATCY	3 cut(s)	788, 866, 874
RsaI	GTAC	5 cut(s)	517, 634, 1032, 1074, 1453
RsaNI	GTAC	5 cut(s)	516, 633, 1031, 1073, 1452
SalI	GTCGAC	1 cut(s)	329
SaqAI	TTAA	3 cut(s)	1323, 1364, 1476
SatI	GCNGC	4 cut(s)	72, 531, 853, 1046
Sau3AI	GATC	9 cut(s)	664, 788, 866, 874, 991, 1014, 1406, 1500, 1534
Sau96I	GGNCC	4 cut(s)	49, 101, 770, 1374
ScaI	AGTACT	1 cut(s)	634
ScrFI	CCNGG	4 cut(s)	33, 233, 1137, 1488
SduI	GDGCHC	2 cut(s)	266, 674
SfaNI	GCATC	5 cut(s)	679, 790, 1168, 1276, 1318
SfcI	CTRYAG	1 cut(s)	495
SinI	GGWCC	2 cut(s)	49, 1374
SmlI	CTYRAG	2 cut(s)	396, 1475
SmoI	CTYRAG	2 cut(s)	396, 1475
SpeI	ACTAGT	1 cut(s)	1097
SphI	GCATGC	2 cut(s)	1045, 1214
SsiI	CCGC	5 cut(s)	72, 85, 196, 531, 1165
SspMI	CTAG	5 cut(s)	26, 149, 524, 995, 1098
StyD4I	CCNGG	4 cut(s)	31, 231, 1135, 1486
StyI	CCWWGG	1 cut(s)	601
TaaI	ACNGT	2 cut(s)	632, 697
TaiI	ACGT	4 cut(s)	60, 94, 1231, 1240
TaqI	TCGA	3 cut(s)	330, 558, 1448
TatI	WGTACW	3 cut(s)	632, 1072, 1451
TauI	GCSGC	2 cut(s)	74, 533
TfiI	GAWTC	8 cut(s)	206, 446, 464, 555, 920, 998, 1055, 1458
Tru1I	TTAA	3 cut(s)	1323, 1364, 1476
Tru9I	TTAA	3 cut(s)	1323, 1364, 1476
TscAI	CASTG	1 cut(s)	448
TseFI	GTSAC	1 cut(s)	58
TseI	GCWGC	2 cut(s)	852, 1045
Tsp45I	GTSAC	1 cut(s)	58
TspGWI	ACGGA	1 cut(s)	1578
TspRI	CASTG	1 cut(s)	448
Vha464I	CTTAAG	1 cut(s)	1475
VpaK11BI	GGWCC	2 cut(s)	49, 1374
XapI	RAATTY	4 cut(s)	592, 881, 1035, 1505
XbaI	TCTAGA	1 cut(s)	994
XceI	RCATGY	3 cut(s)	728, 1045, 1214
XmiI	GTMKAC	1 cut(s)	330
XmnI	GAANNNNTTC	1 cut(s)	948
XspI	CTAG	5 cut(s)	26, 149, 524, 995, 1098
ZrmI	AGTACT	1 cut(s)	634
Zsp2I	ATGCAT	1 cut(s)	1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.