Prupe.1G295500_v2.0.a1

Alpha beta hydrolase domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0011268
Physical Location & Seq
Forward (+)
29228913 .. 29231751
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G295500.3

Sequence Viewer

Length: 1143 bp
ATGGGGTCTGCAACATCTTCTATGGCTGCAAAGTTTGCATTTTTCCCACCAGACCCTCCATCATATAGCGTATATGTGGATGAACCAACTGGGAAATTGAGGATCTCTGATGTTCATCCCAGAGATGATGTGGACGTGGTCAAGCTCAGCACCAAGAAAGGGAATGAGATTGTGGCCATGTTTGTCAAAAACCCATGTGCTTCTCTCACTCTGCTTTACTCCCATGGAAATGCTGCTGATCTAGGTCAGATGTACCACATTTTCACTGAGCTTAGTCTTCATCTTGGTGTAAATCTCATGGGGTACGACTATTCTGGTTATGGACAATCTTCTGGAAAGCCAAGTGAGCAGGACACTTATGCAGACATAGAAGCTGCATATAAATGCCTCGAAGAGACGTATGGTATAAAGGAGGAAGACGTCATATTGTATGGACAGTCAGTTGGAAGTGGACCAGCTTTGGAGTTGGCTATTCGTTTGCCTCACTTGAGGGCTGTAGTTCTGCACAGTCCTATACTGTCTGGCCTTCGAGTGATGTACCCTGTTAAGAAAACATTCTGGTTCGACATTTACAAGAATATCGATAAGATCCCGTTTGTCAATTGCCCAGTTCTGGTAATTCATGGAACTGAAGATGAAGTTGTGGATTTCTCCCATGGTAAGCAACTGTGGGAGCTTTGCAAAGAGAAGTATGAGCCTTTGTGGCTTAAAGGAGGGAACCATTGTAATTTGGAACTCTATCCAGAGTACTTGAGGCATCTCAGGAAGTTCATATCTGCCATAGAGAAATTACCACGTGTTCAAAGTTTACCTGAACCAAGTGCAGATCAATTGGAGTCTTCTCTGAAGACCATAGACAACAAGGAGAAGGCCAGATCAAGCACTGACCAGAAAGAGAAGTCTAGGTCCAGCACTGGGCAGAGAGAAAAATCGAGACTGAGCACGGACGGCAGAGAGAAATCAAGAACCAGCACTGATAAGAGAGAGAAGTCAAGAAAGAGCACCGATCGATCTGGCAAGGCAAGAAATAGCACAGATCAGTCAGAGAGAGCTAGAAACAGCTTCGACCGCTTGGGAGATATGGTGAGGTCGGTTGGATTGTGTAATGTTGATTGTCTGAAGCATGCAGCATTAGAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Hydrolase_4

Protein Analysis

381

Amino Acids

42.62

Weight (kDa)

7.61

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011268)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13610 AT1G13610
fragaria_vesca FvH4_4g29030
malus_domestica MD13G1055400.v1.1 MD16G1054200.v1.1
prunus_persica Prupe.1G295500_v2.0.a1 Prupe.1G295500_v2.0.a1 Prupe.1G295500_v2.0.a1
pyrus_communis pycom13g04900 pycom16g04720
rosa_chinensis RchiOBHm_Chr4g0437131
rosa_laevigata RLG00000006466
rosa_multiflora Rmu_ssc0000006.1_g000003
rosa_roxburghii Rroxscaffold_5G00378200
rosa_rugosa Rorug04G0298200
rosa_samantha Rh4AG353100 Rh4BG362600 Rh4CG376800 Rh4DG356600
rosa_wichuraiana Rw4G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 423
AciI CCGC 1 cut(s) 1069
AclWI GGATC 2 cut(s) 110, 583
AcoI YGGCCR 1 cut(s) 174
AcuI CTGAAG 3 cut(s) 651, 866, 1139
AcvI CACGTG 1 cut(s) 797
AcyI GRCGYC 1 cut(s) 420
AfaI GTAC 4 cut(s) 254, 305, 539, 749
AfiI CCNNNNNNNGG 3 cut(s) 159, 613, 915
AflIII ACRYGT 1 cut(s) 796
AgsI TTSAA 1 cut(s) 803
AjiI CACGTC 1 cut(s) 136
AluBI AGCT 7 cut(s) 145, 271, 374, 458, 676, 1052, 1062
AluI AGCT 7 cut(s) 145, 271, 374, 458, 676, 1052, 1062
Alw21I GWGCWC 2 cut(s) 944, 1004
Alw26I GTCTC 2 cut(s) 389, 928
AlwI GGATC 2 cut(s) 110, 583
AoxI GGCC 3 cut(s) 174, 523, 870
ApeKI GCWGC 4 cut(s) 26, 233, 374, 1127
Asp700I GAANNNNTTC 1 cut(s) 554
AspS9I GGNCC 2 cut(s) 452, 906
AsuHPI GGTGA 1 cut(s) 1096
AvaII GGWCC 2 cut(s) 452, 906
BalI TGGCCA 1 cut(s) 176
BbrPI CACGTG 1 cut(s) 797
BbsI GAAGAC 4 cut(s) 269, 423, 831, 854
Bbv12I GWGCWC 2 cut(s) 944, 1004
BbvI GCAGC 4 cut(s) 13, 220, 361, 1139
BccI CCATC 1 cut(s) 67
BceAI ACGGC 1 cut(s) 964
BcoDI GTCTC 2 cut(s) 389, 928
BfaI CTAG 3 cut(s) 242, 903, 1053
BfmI CTRYAG 1 cut(s) 495
BglI GCCNNNNNGGC 1 cut(s) 703
BisI GCNGC 4 cut(s) 27, 234, 375, 1128
BlpI GCTNAGC 1 cut(s) 146
BlsI GCNGC 4 cut(s) 28, 235, 376, 1129
BmcAI AGTACT 1 cut(s) 749
Bme18I GGWCC 2 cut(s) 452, 906
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 2 cut(s) 452, 906
BmiI GGNNCC 1 cut(s) 719
BmrI ACTGGG 3 cut(s) 99, 602, 924
BmsI GCATC 1 cut(s) 766
BmuI ACTGGG 3 cut(s) 99, 602, 924
BpiI GAAGAC 4 cut(s) 269, 423, 831, 854
Bpu1102I GCTNAGC 1 cut(s) 146
BpuEI CTTGAG 2 cut(s) 508, 772
Bsa29I ATCGAT 2 cut(s) 582, 1009
BsaAI YACGTR 1 cut(s) 797
BsaBI GATNNNNATC 1 cut(s) 114
BsaHI GRCGYC 1 cut(s) 420
BsaJI CCNNGG 2 cut(s) 223, 655
BsaXI ACNNNNNCTCC 2 cut(s) 1068, 1098
Bsc4I CCNNNNNNNGG 3 cut(s) 159, 613, 915
Bse1I ACTGG 3 cut(s) 94, 608, 919
Bse8I GATNNNNATC 1 cut(s) 114
BseCI ATCGAT 2 cut(s) 582, 1009
BseDI CCNNGG 2 cut(s) 223, 655
BseGI GGATG 2 cut(s) 85, 115
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 3 cut(s) 159, 613, 915
BseMII CTCAG 4 cut(s) 160, 258, 775, 929
BseNI ACTGG 3 cut(s) 94, 608, 919
BseXI GCAGC 4 cut(s) 13, 220, 361, 1139
BsgI GTGCAG 2 cut(s) 488, 843
Bsh1285I CGRYCG 2 cut(s) 1009, 1069
BshFI GGCC 3 cut(s) 176, 525, 872
BshVI ATCGAT 2 cut(s) 582, 1009
BsiEI CGRYCG 2 cut(s) 1009, 1069
BsiHKAI GWGCWC 2 cut(s) 944, 1004
BslI CCNNNNNNNGG 3 cut(s) 159, 613, 915
BsmAI GTCTC 2 cut(s) 389, 928
BsmBI CGTCTC 1 cut(s) 389
BsnI GGCC 3 cut(s) 176, 525, 872
Bsp1286I GDGCHC 2 cut(s) 944, 1004
Bsp143I GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
Bsp1720I GCTNAGC 1 cut(s) 146
Bsp19I CCATGG 2 cut(s) 223, 655
BspACI CCGC 1 cut(s) 1069
BspANI GGCC 3 cut(s) 176, 525, 872
BspCNI CTCAG 4 cut(s) 159, 259, 774, 930
BspDI ATCGAT 2 cut(s) 582, 1009
BspLI GGNNCC 1 cut(s) 719
BspPI GGATC 2 cut(s) 110, 583
BsrI ACTGG 3 cut(s) 94, 608, 919
BssECI CCNNGG 2 cut(s) 223, 655
BssMI GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
BssNI GRCGYC 1 cut(s) 420
BssT1I CCWWGG 2 cut(s) 223, 655
Bst4CI ACNGT 4 cut(s) 438, 509, 519, 669
Bst6I CTCTTC 1 cut(s) 387
BstACI GRCGYC 1 cut(s) 420
BstAPI GCANNNNNTGC 1 cut(s) 35
BstBAI YACGTR 1 cut(s) 797
BstC8I GCNNGC 1 cut(s) 1125
BstDEI CTNAG 5 cut(s) 146, 267, 272, 761, 938
BstDSI CCRYGG 2 cut(s) 223, 655
BstF5I GGATG 2 cut(s) 85, 115
BstKTI GATC 8 cut(s) 105, 241, 591, 829, 878, 1009, 1013, 1039
BstMAI GTCTC 2 cut(s) 389, 928
BstMBI GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
BstMCI CGRYCG 2 cut(s) 1009, 1069
BstMWI GCNNNNNNNGC 6 cut(s) 35, 346, 703, 948, 1068, 1136
BstNSI RCATGY 1 cut(s) 1127
BstSFI CTRYAG 1 cut(s) 495
BstV1I GCAGC 4 cut(s) 13, 220, 361, 1139
BstV2I GAAGAC 4 cut(s) 269, 423, 831, 854
BstX2I RGATCY 2 cut(s) 102, 588
BstYI RGATCY 2 cut(s) 102, 588
Bsu15I ATCGAT 2 cut(s) 582, 1009
BsuRI GGCC 3 cut(s) 176, 525, 872
BsuTUI ATCGAT 2 cut(s) 582, 1009
BtgI CCRYGG 2 cut(s) 223, 655
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 2 cut(s) 85, 115
BtsIMutI CAGTG 4 cut(s) 264, 882, 912, 972
Cac8I GCNNGC 1 cut(s) 1125
Cfr13I GGNCC 2 cut(s) 452, 906
ClaI ATCGAT 2 cut(s) 582, 1009
Csp6I GTAC 4 cut(s) 253, 304, 538, 748
CviAII CATG 7 cut(s) 178, 195, 224, 298, 623, 656, 1124
CviQI GTAC 4 cut(s) 253, 304, 538, 748
DdeI CTNAG 5 cut(s) 146, 267, 272, 761, 938
DpnI GATC 8 cut(s) 104, 240, 590, 828, 877, 1008, 1012, 1038
DpnII GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
EaeI YGGCCR 1 cut(s) 174
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Eco130I CCWWGG 2 cut(s) 223, 655
Eco47I GGWCC 2 cut(s) 452, 906
Eco57I CTGAAG 3 cut(s) 651, 866, 1139
Eco72I CACGTG 1 cut(s) 797
EcoT14I CCWWGG 2 cut(s) 223, 655
ErhI CCWWGG 2 cut(s) 223, 655
Esp3I CGTCTC 1 cut(s) 389
FaeI CATG 7 cut(s) 181, 198, 227, 301, 626, 659, 1127
FatI CATG 7 cut(s) 177, 194, 223, 297, 622, 655, 1123
Fnu4HI GCNGC 4 cut(s) 27, 234, 375, 1128
FokI GGATG 2 cut(s) 92, 102
Fsp4HI GCNGC 4 cut(s) 27, 234, 375, 1128
FspBI CTAG 3 cut(s) 242, 903, 1053
GluI GCNGC 4 cut(s) 27, 234, 375, 1128
HaeIII GGCC 3 cut(s) 176, 525, 872
Hin1I GRCGYC 1 cut(s) 420
Hin1II CATG 7 cut(s) 181, 198, 227, 301, 626, 659, 1127
HinfI GANTC 1 cut(s) 836
HphI GGTGA 1 cut(s) 1096
Hpy166II GTNNAC 3 cut(s) 133, 452, 809
Hpy188I TCNGA 5 cut(s) 109, 249, 846, 1045, 1119
Hpy188III TCNNGA 6 cut(s) 333, 743, 763, 933, 963, 993
Hpy8I GTNNAC 3 cut(s) 133, 452, 809
HpyAV CCTTC 2 cut(s) 536, 862
HpyCH4III ACNGT 4 cut(s) 438, 509, 519, 669
HpyCH4IV ACGT 4 cut(s) 135, 398, 420, 796
HpyCH4V TGCA 9 cut(s) 11, 29, 38, 362, 377, 505, 681, 824, 1127
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 346, 703, 948, 1068, 1136
HpyF3I CTNAG 5 cut(s) 146, 267, 272, 761, 938
HpySE526I ACGT 4 cut(s) 135, 398, 420, 796
Hsp92I GRCGYC 1 cut(s) 420
Hsp92II CATG 7 cut(s) 181, 198, 227, 301, 626, 659, 1127
Kzo9I GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
LmnI GCTCC 1 cut(s) 673
Lsp1109I GCAGC 4 cut(s) 13, 220, 361, 1139
LweI GCATC 1 cut(s) 766
MaeI CTAG 3 cut(s) 242, 903, 1053
MaeII ACGT 4 cut(s) 135, 398, 420, 796
MalI GATC 8 cut(s) 104, 240, 590, 828, 877, 1008, 1012, 1038
MboI GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
MboII GAAGA 8 cut(s) 9, 269, 321, 404, 428, 644, 831, 859
MfeI CAATTG 2 cut(s) 601, 830
MflI RGATCY 2 cut(s) 102, 588
MhlI GDGCHC 2 cut(s) 944, 1004
MlsI TGGCCA 1 cut(s) 176
MluCI AATT 6 cut(s) 95, 601, 618, 727, 788, 830
MluNI TGGCCA 1 cut(s) 176
MlyI GAGTC 1 cut(s) 845
MmeI TCCRAC 2 cut(s) 424, 1075
Mox20I TGGCCA 1 cut(s) 176
MroXI GAANNNNTTC 1 cut(s) 554
MscI TGGCCA 1 cut(s) 176
MseI TTAA 2 cut(s) 546, 708
MslI CAYNNNNRTG 3 cut(s) 228, 285, 382
Msp20I TGGCCA 1 cut(s) 176
MunI CAATTG 2 cut(s) 601, 830
MwoI GCNNNNNNNGC 6 cut(s) 35, 346, 703, 948, 1068, 1136
NcoI CCATGG 2 cut(s) 223, 655
NdeII GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
NlaIII CATG 7 cut(s) 181, 198, 227, 301, 626, 659, 1127
NlaIV GGNNCC 1 cut(s) 719
NspI RCATGY 1 cut(s) 1127
PaeI GCATGC 1 cut(s) 1127
PdmI GAANNNNTTC 1 cut(s) 554
PflFI GACNNNGTC 1 cut(s) 137
PkrI GCNGC 4 cut(s) 28, 235, 376, 1129
Ple19I CGATCG 1 cut(s) 1009
PleI GAGTC 1 cut(s) 844
PmaCI CACGTG 1 cut(s) 797
PmlI CACGTG 1 cut(s) 797
PpsI GAGTC 1 cut(s) 844
Ppu21I YACGTR 1 cut(s) 797
PspCI CACGTG 1 cut(s) 797
PspN4I GGNNCC 1 cut(s) 719
PspPI GGNCC 2 cut(s) 452, 906
PsuI RGATCY 2 cut(s) 102, 588
PsyI GACNNNGTC 1 cut(s) 137
PvuI CGATCG 1 cut(s) 1009
RsaI GTAC 4 cut(s) 254, 305, 539, 749
RsaNI GTAC 4 cut(s) 253, 304, 538, 748
RseI CAYNNNNRTG 3 cut(s) 228, 285, 382
SaqAI TTAA 2 cut(s) 546, 708
SatI GCNGC 4 cut(s) 27, 234, 375, 1128
Sau3AI GATC 8 cut(s) 102, 238, 588, 826, 875, 1006, 1010, 1036
Sau96I GGNCC 2 cut(s) 452, 906
ScaI AGTACT 1 cut(s) 749
SchI GAGTC 1 cut(s) 845
SduI GDGCHC 2 cut(s) 944, 1004
SfaNI GCATC 1 cut(s) 766
SfcI CTRYAG 1 cut(s) 495
SinI GGWCC 2 cut(s) 452, 906
SmiMI CAYNNNNRTG 3 cut(s) 228, 285, 382
SmlI CTYRAG 2 cut(s) 487, 751
SmoI CTYRAG 2 cut(s) 487, 751
SphI GCATGC 1 cut(s) 1127
Sse9I AATT 6 cut(s) 95, 601, 618, 727, 788, 830
SsiI CCGC 1 cut(s) 1069
SspMI CTAG 3 cut(s) 242, 903, 1053
StyI CCWWGG 2 cut(s) 223, 655
TaaI ACNGT 4 cut(s) 438, 509, 519, 669
TaiI ACGT 4 cut(s) 138, 401, 423, 799
TaqI TCGA 7 cut(s) 390, 529, 564, 582, 932, 1009, 1065
TasI AATT 6 cut(s) 95, 601, 618, 727, 788, 830
TatI WGTACW 1 cut(s) 747
Tru1I TTAA 2 cut(s) 546, 708
Tru9I TTAA 2 cut(s) 546, 708
TscAI CASTG 4 cut(s) 271, 889, 919, 979
TseI GCWGC 4 cut(s) 26, 233, 374, 1127
TspDTI ATGAA 6 cut(s) 96, 104, 269, 611, 651, 760
TspGWI ACGGA 1 cut(s) 959
TspRI CASTG 4 cut(s) 271, 889, 919, 979
Tth111I GACNNNGTC 1 cut(s) 137
VpaK11BI GGWCC 2 cut(s) 452, 906
XceI RCATGY 1 cut(s) 1127
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XmnI GAANNNNTTC 1 cut(s) 554
XspI CTAG 3 cut(s) 242, 903, 1053
ZraI GACGTC 1 cut(s) 421
ZrmI AGTACT 1 cut(s) 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.