Prupe.1G315700_v2.0.a1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
30482350 .. 30486441
4092 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G315700.1

Sequence Viewer

Length: 1194 bp
ATGATGGTCGTCGAAATAGCAGAGAAGAGAGACCAAGGCCAAGCCCCCTTATTTGCTCTAAAGAGACTAGAAAGTGCTTTGACGATGGGGGGCGGGGCCGCTCAATCTTCTGACCGCCACACTGTCCGAGATGGCATCTGCCACGCCGGTGCAGGCGCCGCCGCTGGTGCTATGGCGGCAACGTTCGTGTGCCCTTTGGATGTCATCAAGACTAGGCTACAGGTCCATGGCATGCCTCCGGGACAAAGAGGTAGTATCATTATCACAAGCCTACAAAACATATTAAAAACTGAAGGTTTGAAGGGGATGTATCGTGGCCTTTCACCAACAATTCTAGCGCTACTTCCAAATTGGGCAGTGTACTTCACAGTTTATGAGCAACTCAAAGGCCTACTCCAGTCACATGTTGATGGCAGCAGCGAACTTACAATTGGTGCAAATATGATAGCTGCTGCTGGTGCCGGGGCTGCCACAGCCATTACAACAAATCCATTGTGGGTTGTTAAGACCAGACTTCAAACACAAGGAATGAGGCCTGGTGTGATTCCTTACAAAAGCATGAGATCTGCTTTCACAAGGATTGCAACTGAGGAAGGCATGCGAGGTCTATATAGTGGGATCTTGCCTTCTTTGGCTGGGATAAGTCATGTTGCAATTCAATTTCCTGCTTATGAAAAGATAAAATCTTTTATGGCAAAAAGGGATAATACAACTGTTGATAAGTTAAACCCTGGTAATGTTGCCATTGCCTCATCGATATCCAAAGTAATTGCTTCAGTAATAACTTACCCTCACGAGGTCGTTCGCTCCAGGCTGCAAGAGCAAGGCCAGGCCAGACATATTGAACCCCAGTATGCAGGGGTTATTGATTGTACAAAGAAGGTGTTCCAAAAGGAAGGCCTTCGTGGATTTTATAATGGTTGTGCCACTAATTTATTAAGAACCACTCCTTCTGCTGTTATTACATTTACCAGTTACGAGATGATAGATAGGTTCTTGCGGAGGGTTGTACTTAAAGAAAAAGAGCATTCAAATGGCCGCCCTAAGCCTGATGGCCATGCTGAATCTCAGCAGGGAAATGGAGGCAACGAGAGAGTGGTGAATAACTCTGATTTGCGGCAATCACAATCCCAAACAAATCAGAGGACACCGATTCCTCTTGCAAACAAAGAGCAGCTAGCAGCAAGACACTGA

Protein Analysis

398

Amino Acids

43.0

Weight (kDa)

9.79

Isoelectric Point (pI)

43.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 915
AccB1I GGYRCC 2 cut(s) 155, 458
AccBSI CCGCTC 1 cut(s) 101
AciI CCGC 9 cut(s) 93, 99, 115, 159, 162, 176, 1000, 1039, 1117
AclI AACGTT 1 cut(s) 182
AclWI GGATC 1 cut(s) 626
AcoI YGGCCR 2 cut(s) 1036, 1054
AcuI CTGAAG 2 cut(s) 312, 759
AcyI GRCGYC 1 cut(s) 156
AfaI GTAC 3 cut(s) 362, 874, 1011
AfeI AGCGCT 1 cut(s) 339
AfiI CCNNNNNNNGG 1 cut(s) 796
AflIII ACRYGT 1 cut(s) 403
AgsI TTSAA 5 cut(s) 301, 518, 659, 845, 1032
AjnI CCWGG 4 cut(s) 535, 730, 809, 828
AjuI GAANNNNNNNTTGG 2 cut(s) 414, 446
AleI CACNNNNGTG 1 cut(s) 147
AluBI AGCT 2 cut(s) 449, 1177
AluI AGCT 2 cut(s) 449, 1177
Alw26I GTCTC 2 cut(s) 24, 58
AlwI GGATC 1 cut(s) 626
Aor51HI AGCGCT 1 cut(s) 339
ApeKI GCWGC 8 cut(s) 414, 417, 449, 452, 467, 814, 1174, 1181
Asp700I GAANNNNTTC 2 cut(s) 884, 900
AspLEI GCGC 2 cut(s) 158, 340
AspS9I GGNCC 2 cut(s) 96, 223
AsuC2I CCSGG 2 cut(s) 240, 463
AsuHPI GGTGA 2 cut(s) 315, 1111
AsuNHI GCTAGC 1 cut(s) 1177
AvaII GGWCC 1 cut(s) 223
BaeGI GKGCMC 1 cut(s) 194
BalI TGGCCA 1 cut(s) 1056
BanI GGYRCC 2 cut(s) 155, 458
BauI CACGAG 1 cut(s) 794
BbvI GCAGC 7 cut(s) 426, 429, 436, 439, 454, 801, 1186
BccI CCATC 4 cut(s) 79, 125, 404, 1046
BciT130I CCWGG 4 cut(s) 537, 732, 811, 830
BcnI CCSGG 2 cut(s) 240, 463
BcoDI GTCTC 2 cut(s) 24, 58
BfaI CTAG 4 cut(s) 68, 213, 335, 1178
BfmI CTRYAG 1 cut(s) 218
BfoI RGCGCY 2 cut(s) 159, 341
BglII AGATCT 1 cut(s) 563
Bme1390I CCNGG 6 cut(s) 240, 463, 537, 732, 811, 830
Bme18I GGWCC 1 cut(s) 223
BmgT120I GGNCC 2 cut(s) 96, 223
BmiI GGNNCC 3 cut(s) 97, 157, 460
BmrFI CCNGG 6 cut(s) 240, 463, 537, 732, 811, 830
BmrI ACTGGG 1 cut(s) 844
BmsI GCATC 1 cut(s) 144
BmtI GCTAGC 1 cut(s) 1181
BmuI ACTGGG 1 cut(s) 844
BpmI CTGGAG 2 cut(s) 380, 793
Bpu10I CCTNAGC 1 cut(s) 1044
BpuMI CCSGG 2 cut(s) 240, 463
Bsa29I ATCGAT 1 cut(s) 755
BsaHI GRCGYC 1 cut(s) 156
BsaI GGTCTC 1 cut(s) 24
BsaJI CCNNGG 4 cut(s) 34, 226, 462, 730
Bsc4I CCNNNNNNNGG 1 cut(s) 796
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 3 cut(s) 397, 850, 972
Bse3DI GCAATG 1 cut(s) 744
BseBI CCWGG 4 cut(s) 537, 732, 811, 830
BseCI ATCGAT 1 cut(s) 755
BseDI CCNNGG 4 cut(s) 34, 226, 462, 730
BseGI GGATG 2 cut(s) 205, 312
BseLI CCNNNNNNNGG 1 cut(s) 796
BseMI GCAATG 1 cut(s) 744
BseMII CTCAG 2 cut(s) 579, 1082
BseNI ACTGG 3 cut(s) 397, 850, 972
BseSI GKGCMC 1 cut(s) 194
BseXI GCAGC 7 cut(s) 426, 429, 436, 439, 454, 801, 1186
BseYI CCCAGC 1 cut(s) 635
BsgI GTGCAG 1 cut(s) 171
BshNI GGYRCC 2 cut(s) 155, 458
BshVI ATCGAT 1 cut(s) 755
BsiSI CCGG 3 cut(s) 147, 239, 462
BslFI GGGAC 1 cut(s) 255
BslI CCNNNNNNNGG 1 cut(s) 796
BsmAI GTCTC 2 cut(s) 24, 58
BsmFI GGGAC 1 cut(s) 255
BsmI GAATGC 1 cut(s) 1027
Bso31I GGTCTC 1 cut(s) 24
Bsp1286I GDGCHC 1 cut(s) 194
Bsp1407I TGTACA 1 cut(s) 872
Bsp143I GATC 2 cut(s) 563, 618
Bsp19I CCATGG 1 cut(s) 226
BspACI CCGC 9 cut(s) 93, 99, 115, 159, 162, 176, 1000, 1039, 1117
BspCNI CTCAG 2 cut(s) 580, 1081
BspDI ATCGAT 1 cut(s) 755
BspLI GGNNCC 3 cut(s) 97, 157, 460
BspOI GCTAGC 1 cut(s) 1181
BspPI GGATC 1 cut(s) 626
BspT107I GGYRCC 2 cut(s) 155, 458
BspTNI GGTCTC 1 cut(s) 24
BsrBI CCGCTC 1 cut(s) 101
BsrDI GCAATG 1 cut(s) 744
BsrFI RCCGGY 1 cut(s) 146
BsrGI TGTACA 1 cut(s) 872
BsrI ACTGG 3 cut(s) 397, 850, 972
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 4 cut(s) 34, 226, 462, 730
BssMI GATC 2 cut(s) 563, 618
BssNI GRCGYC 1 cut(s) 156
BssSI CACGAG 1 cut(s) 794
BssT1I CCWWGG 2 cut(s) 34, 226
Bst2BI CACGAG 1 cut(s) 794
Bst2UI CCWGG 4 cut(s) 537, 732, 811, 830
Bst4CI ACNGT 3 cut(s) 124, 370, 715
Bst6I CTCTTC 1 cut(s) 20
BstACI GRCGYC 1 cut(s) 156
BstAUI TGTACA 1 cut(s) 872
BstC8I GCNNGC 4 cut(s) 154, 233, 599, 1179
BstDEI CTNAG 3 cut(s) 588, 1044, 1068
BstDSI CCRYGG 1 cut(s) 226
BstF5I GGATG 2 cut(s) 205, 312
BstH2I RGCGCY 2 cut(s) 159, 341
BstHHI GCGC 2 cut(s) 158, 340
BstKTI GATC 2 cut(s) 566, 621
BstMAI GTCTC 2 cut(s) 24, 58
BstMBI GATC 2 cut(s) 563, 618
BstMWI GCNNNNNNNGC 7 cut(s) 158, 167, 176, 458, 467, 473, 820
BstNI CCWGG 4 cut(s) 537, 732, 811, 830
BstNSI RCATGY 3 cut(s) 235, 407, 601
BstSCI CCNGG 6 cut(s) 238, 461, 535, 730, 809, 828
BstSFI CTRYAG 1 cut(s) 218
BstSLI GKGCMC 1 cut(s) 194
BstV1I GCAGC 7 cut(s) 426, 429, 436, 439, 454, 801, 1186
BstX2I RGATCY 2 cut(s) 563, 618
BstYI RGATCY 2 cut(s) 563, 618
Bsu15I ATCGAT 1 cut(s) 755
BsuTUI ATCGAT 1 cut(s) 755
BtgI CCRYGG 1 cut(s) 226
BtsCI GGATG 2 cut(s) 205, 312
BtsI GCAGTG 1 cut(s) 363
BtsIMutI CAGTG 3 cut(s) 120, 363, 1189
Cac8I GCNNGC 4 cut(s) 154, 233, 599, 1179
CfoI GCGC 2 cut(s) 158, 340
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 2 cut(s) 96, 223
ClaI ATCGAT 1 cut(s) 755
Csp6I GTAC 3 cut(s) 361, 873, 1010
CviAII CATG 7 cut(s) 227, 232, 404, 559, 598, 647, 1058
CviQI GTAC 3 cut(s) 361, 873, 1010
DdeI CTNAG 3 cut(s) 588, 1044, 1068
DinI GGCGCC 1 cut(s) 157
DpnI GATC 2 cut(s) 565, 620
DpnII GATC 2 cut(s) 563, 618
EaeI YGGCCR 2 cut(s) 1036, 1054
Eam1104I CTCTTC 1 cut(s) 20
EarI CTCTTC 1 cut(s) 20
Eco130I CCWWGG 2 cut(s) 34, 226
Eco147I AGGCCT 3 cut(s) 390, 535, 900
Eco31I GGTCTC 1 cut(s) 24
Eco32I GATATC 1 cut(s) 759
Eco47I GGWCC 1 cut(s) 223
Eco47III AGCGCT 1 cut(s) 339
Eco57I CTGAAG 2 cut(s) 312, 759
EcoRII CCWGG 4 cut(s) 535, 730, 809, 828
EcoRV GATATC 1 cut(s) 759
EcoT14I CCWWGG 2 cut(s) 34, 226
EgeI GGCGCC 1 cut(s) 157
EheI GGCGCC 1 cut(s) 157
ErhI CCWWGG 2 cut(s) 34, 226
FaeI CATG 7 cut(s) 230, 235, 407, 562, 601, 650, 1061
FaqI GGGAC 1 cut(s) 255
FatI CATG 7 cut(s) 226, 231, 403, 558, 597, 646, 1057
FauI CCCGC 1 cut(s) 86
FokI GGATG 2 cut(s) 212, 319
FspBI CTAG 4 cut(s) 68, 213, 335, 1178
GlaI GCGC 2 cut(s) 157, 339
GsaI CCCAGC 1 cut(s) 639
GsuI CTGGAG 2 cut(s) 380, 793
HaeII RGCGCY 2 cut(s) 159, 341
HapII CCGG 3 cut(s) 147, 239, 462
HhaI GCGC 2 cut(s) 158, 340
Hin1I GRCGYC 1 cut(s) 156
Hin1II CATG 7 cut(s) 230, 235, 407, 562, 601, 650, 1061
Hin6I GCGC 2 cut(s) 156, 338
HinP1I GCGC 2 cut(s) 156, 338
HinfI GANTC 3 cut(s) 544, 1064, 1153
HpaII CCGG 3 cut(s) 147, 239, 462
HphI GGTGA 2 cut(s) 315, 1111
Hpy166II GTNNAC 1 cut(s) 361
Hpy188I TCNGA 4 cut(s) 112, 128, 1111, 1143
Hpy188III TCNNGA 2 cut(s) 208, 794
Hpy8I GTNNAC 1 cut(s) 361
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 8 cut(s) 287, 295, 587, 636, 874, 890, 911, 960
HpyCH4III ACNGT 3 cut(s) 124, 370, 715
HpyCH4IV ACGT 1 cut(s) 182
HpyCH4V TGCA 7 cut(s) 152, 437, 584, 653, 817, 857, 1163
HpyF10VI GCNNNNNNNGC 7 cut(s) 158, 167, 176, 458, 467, 473, 820
HpyF3I CTNAG 3 cut(s) 588, 1044, 1068
HpySE526I ACGT 1 cut(s) 182
Hsp92I GRCGYC 1 cut(s) 156
Hsp92II CATG 7 cut(s) 230, 235, 407, 562, 601, 650, 1061
HspAI GCGC 2 cut(s) 156, 338
KasI GGCGCC 1 cut(s) 155
Kzo9I GATC 2 cut(s) 563, 618
LmnI GCTCC 1 cut(s) 812
Lsp1109I GCAGC 7 cut(s) 426, 429, 436, 439, 454, 801, 1186
LweI GCATC 1 cut(s) 144
MaeI CTAG 4 cut(s) 68, 213, 335, 1178
MaeII ACGT 1 cut(s) 182
MaeIII GTNAC 2 cut(s) 399, 974
MalI GATC 2 cut(s) 565, 620
MbiI CCGCTC 1 cut(s) 101
MboI GATC 2 cut(s) 563, 618
MboII GAAGA 2 cut(s) 37, 99
MfeI CAATTG 1 cut(s) 429
MflI RGATCY 2 cut(s) 563, 618
MhlI GDGCHC 1 cut(s) 194
MlsI TGGCCA 1 cut(s) 1056
MluCI AATT 7 cut(s) 330, 349, 429, 654, 659, 768, 931
MluNI TGGCCA 1 cut(s) 1056
Mly113I GGCGCC 1 cut(s) 156
Mox20I TGGCCA 1 cut(s) 1056
MroXI GAANNNNTTC 2 cut(s) 884, 900
MscI TGGCCA 1 cut(s) 1056
MseI TTAA 5 cut(s) 284, 504, 725, 938, 1014
MslI CAYNNNNRTG 3 cut(s) 147, 408, 1032
Msp20I TGGCCA 1 cut(s) 1056
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 3 cut(s) 147, 239, 462
MspR9I CCNGG 6 cut(s) 240, 463, 537, 732, 811, 830
MunI CAATTG 1 cut(s) 429
Mva1269I GAATGC 1 cut(s) 1027
MvaI CCWGG 4 cut(s) 537, 732, 811, 830
MwoI GCNNNNNNNGC 7 cut(s) 158, 167, 176, 458, 467, 473, 820
NarI GGCGCC 1 cut(s) 156
NciI CCSGG 2 cut(s) 240, 463
NcoI CCATGG 1 cut(s) 226
NdeII GATC 2 cut(s) 563, 618
NheI GCTAGC 1 cut(s) 1177
NlaIII CATG 7 cut(s) 230, 235, 407, 562, 601, 650, 1061
NlaIV GGNNCC 3 cut(s) 97, 157, 460
NmuCI GTSAC 1 cut(s) 399
NspI RCATGY 3 cut(s) 235, 407, 601
OliI CACNNNNGTG 1 cut(s) 147
PaeI GCATGC 2 cut(s) 235, 601
PceI AGGCCT 3 cut(s) 390, 535, 900
PciI ACATGT 1 cut(s) 403
PctI GAATGC 1 cut(s) 1027
PdmI GAANNNNTTC 2 cut(s) 884, 900
PfeI GAWTC 3 cut(s) 544, 1064, 1153
PfoI TCCNGGA 1 cut(s) 238
PluTI GGCGCC 1 cut(s) 159
PscI ACATGT 1 cut(s) 403
PsiI TTATAA 1 cut(s) 915
Psp1406I AACGTT 1 cut(s) 182
Psp6I CCWGG 4 cut(s) 535, 730, 809, 828
PspFI CCCAGC 1 cut(s) 635
PspGI CCWGG 4 cut(s) 535, 730, 809, 828
PspN4I GGNNCC 3 cut(s) 97, 157, 460
PspPI GGNCC 2 cut(s) 96, 223
PsuI RGATCY 2 cut(s) 563, 618
RsaI GTAC 3 cut(s) 362, 874, 1011
RsaNI GTAC 3 cut(s) 361, 873, 1010
RseI CAYNNNNRTG 3 cut(s) 147, 408, 1032
SaqAI TTAA 5 cut(s) 284, 504, 725, 938, 1014
Sau3AI GATC 2 cut(s) 563, 618
Sau96I GGNCC 2 cut(s) 96, 223
ScrFI CCNGG 6 cut(s) 240, 463, 537, 732, 811, 830
SduI GDGCHC 1 cut(s) 194
SfaNI GCATC 1 cut(s) 144
SfcI CTRYAG 1 cut(s) 218
SfoI GGCGCC 1 cut(s) 157
SgrAI CRCCGGYG 1 cut(s) 146
SinI GGWCC 1 cut(s) 223
SmiMI CAYNNNNRTG 3 cut(s) 147, 408, 1032
SphI GCATGC 2 cut(s) 235, 601
Sse9I AATT 7 cut(s) 330, 349, 429, 654, 659, 768, 931
SseBI AGGCCT 3 cut(s) 390, 535, 900
SsiI CCGC 9 cut(s) 93, 99, 115, 159, 162, 176, 1000, 1039, 1117
SspDI GGCGCC 1 cut(s) 155
SspMI CTAG 4 cut(s) 68, 213, 335, 1178
StuI AGGCCT 3 cut(s) 390, 535, 900
StyD4I CCNGG 6 cut(s) 238, 461, 535, 730, 809, 828
StyI CCWWGG 2 cut(s) 34, 226
TaaI ACNGT 3 cut(s) 124, 370, 715
TaiI ACGT 1 cut(s) 185
TaqI TCGA 2 cut(s) 12, 755
TasI AATT 7 cut(s) 330, 349, 429, 654, 659, 768, 931
TatI WGTACW 3 cut(s) 360, 872, 1009
TauI GCSGC 6 cut(s) 101, 161, 164, 179, 1041, 1120
TfiI GAWTC 3 cut(s) 544, 1064, 1153
Tru1I TTAA 5 cut(s) 284, 504, 725, 938, 1014
Tru9I TTAA 5 cut(s) 284, 504, 725, 938, 1014
TscAI CASTG 2 cut(s) 127, 363
TseFI GTSAC 1 cut(s) 399
TseI GCWGC 8 cut(s) 414, 417, 449, 452, 467, 814, 1174, 1181
Tsp45I GTSAC 1 cut(s) 399
TspDTI ATGAA 1 cut(s) 687
TspRI CASTG 2 cut(s) 127, 363
VpaK11BI GGWCC 1 cut(s) 223
XceI RCATGY 3 cut(s) 235, 407, 601
XmnI GAANNNNTTC 2 cut(s) 884, 900
XspI CTAG 4 cut(s) 68, 213, 335, 1178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.