Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0014915

Physical Location & Seq

Genomic Coordinates Reverse (-)

31826978 .. 31830101

Gene Structure 3124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G337600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGAAATGAAGACCAGGACTATTGCAAGTGTTTTGATCTCTGTTCTAGTTGTGTGCAGCTTGTCTTGTGCAGCAGAGCTACTACGACGATTCCAGCACGCACCCAAAGCCGATGGATCTCTTAGCTTTTTGGTTCTTGGAGATTGGGGAAGAAGAGGAGCCTTCAATCAATCTCAAGTTGCTCTTCAGATGGGAATAATTGGTGAGAAGTTGGATATTGATTTTGTAATATCCACGGGGGATAATTTTTACGATAATGGATTGACGGGCATCGACGATCCAAATTTCGAAGACTCATTTACCAAAATCTACACAGCACCGAGCCTGCAGAAGCAATGGTACAATGTTCTGGGTAATCATGATTATAGAGGTGATGTTGAAGCACAACTGAGTCCTGTTCTCAGAGAATTGGATGCCAAATGGCTTTGCTTGAGATCCTTCATAGTTGATACCGAAATTGCAGAGCTTTTCTTTGTGGATACAACTCCCTTTGTTGATAAATATTTCACTCATCCAGAGGACGCTGTCTATGACTGGAGTGGCATATTACCCCGAAATCATTACTTATCAAATCTCCTCAACGATTTGGATTCAGCATTAAAAGAATCTACTGCAAAGTGGAAGATCGTCATTGGCCACCACACGATTAGAAGCGCTGGATATCATGGTGAAACAAAGGAGCTTGTAACACAGCTTCTCCCAATTCTTCTGGAGAATAATGTTGATCTTTACATGAATGGGCACGACCATTGCTTAGAACATATAAGTAGTCCCGACAGCCCACTTCAGTTTGTAACAAGTGGTGGTGGGTCAAAGGCATGGAAGGGTGAAGCTAGTCTGTACAATCCAAGCGAAATGAAATTGTATTACGATGGGCAGGGTTTCATGTCAGTGCAAATCACTGAAAGACAAGTGGATATTGCCTTCTATGATATTTTTGGCAATGTCCTGCATAAATGGGCCACGTCAAACCAGCTTTACCCTACCATCACCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323

Pfam Domains

Protein Families

Metallophos

Protein Analysis

333

Amino Acids

37.43

Weight (kDa)

5.02

Isoelectric Point (pI)

39.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014915)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g33011 FvH4_4g33011
malus_domestica	MD13G1016000.v1.1 MD16G1013600.v1.1
prunus_persica	Prupe.1G337600_v2.0.a1
pyrus_communis	pycom13g01370
rosa_chinensis	RchiOBHm_Chr4g0442051
rosa_laevigata	RLG00000006048
rosa_multiflora	Rmu_sc0002501.1_g000009
rosa_roxburghii	Rroxscaffold_5G00382970
rosa_rugosa	Rorug04G0338300
rosa_samantha	Rh4AG390000 Rh4BG403400 Rh4CG418500 Rh4DG396600
rosa_wichuraiana	Rw4G033700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	3 cut(s)	124, 272, 429
AcoI	YGGCCR	1 cut(s)	634
AcsI	RAATTY	1 cut(s)	283
AcuI	CTGAAG	2 cut(s)	170, 770
AfaI	GTAC	2 cut(s)	341, 842
AfeI	AGCGCT	1 cut(s)	655
AgsI	TTSAA	2 cut(s)	166, 380
AjiI	CACGTC	1 cut(s)	966
AjnI	CCWGG	1 cut(s)	14
AluBI	AGCT	8 cut(s)	60, 79, 126, 466, 682, 694, 833, 976
AluI	AGCT	8 cut(s)	60, 79, 126, 466, 682, 694, 833, 976
AlwI	GGATC	3 cut(s)	124, 272, 429
Aor51HI	AGCGCT	1 cut(s)	655
AoxI	GGCC	2 cut(s)	634, 960
ApeKI	GCWGC	2 cut(s)	57, 71
ApoI	RAATTY	1 cut(s)	283
AspLEI	GCGC	1 cut(s)	656
AspS9I	GGNCC	1 cut(s)	960
AsuHPI	GGTGA	5 cut(s)	215, 383, 680, 839, 982
AsuII	TTCGAA	1 cut(s)	288
BaeGI	GKGCMC	1 cut(s)	744
BalI	TGGCCA	1 cut(s)	636
BarI	GAAGNNNNNNTAC	4 cut(s)	323, 355, 678, 710
BbsI	GAAGAC	2 cut(s)	17, 297
BbvI	GCAGC	2 cut(s)	69, 83
BccI	CCATC	4 cut(s)	107, 184, 866, 995
BciT130I	CCWGG	1 cut(s)	16
BciVI	GTATCC	1 cut(s)	472
BfaI	CTAG	2 cut(s)	47, 834
BfmI	CTRYAG	1 cut(s)	326
BfoI	RGCGCY	1 cut(s)	657
BfuI	GTATCC	1 cut(s)	472
BisI	GCNGC	2 cut(s)	58, 72
BlsI	GCNGC	2 cut(s)	59, 73
Bme1390I	CCNGG	1 cut(s)	16
BmgBI	CACGTC	1 cut(s)	966
BmgT120I	GGNCC	1 cut(s)	960
BmiI	GGNNCC	1 cut(s)	160
BmrFI	CCNGG	1 cut(s)	16
BmsI	GCATC	2 cut(s)	279, 403
BpiI	GAAGAC	2 cut(s)	17, 297
BpmI	CTGGAG	2 cut(s)	556, 731
Bpu14I	TTCGAA	1 cut(s)	288
BpuEI	CTTGAG	2 cut(s)	159, 451
BsaJI	CCNNGG	1 cut(s)	234
BsaXI	ACNNNNNCTCC	2 cut(s)	681, 711
Bse1I	ACTGG	1 cut(s)	539
Bse3DI	GCAATG	3 cut(s)	341, 748, 949
BseBI	CCWGG	1 cut(s)	16
BseDI	CCNNGG	1 cut(s)	234
BseGI	GGATG	2 cut(s)	418, 511
BseMI	GCAATG	3 cut(s)	341, 748, 949
BseMII	CTCAG	2 cut(s)	380, 415
BseNI	ACTGG	1 cut(s)	539
BseRI	GAGGAG	2 cut(s)	171, 566
BseSI	GKGCMC	1 cut(s)	744
BseXI	GCAGC	2 cut(s)	69, 83
BsgI	GTGCAG	2 cut(s)	76, 90
BshFI	GGCC	2 cut(s)	636, 962
BslFI	GGGAC	1 cut(s)	756
BsmFI	GGGAC	1 cut(s)	756
BsnI	GGCC	2 cut(s)	636, 962
Bsp119I	TTCGAA	1 cut(s)	288
Bsp1286I	GDGCHC	1 cut(s)	744
Bsp1407I	TGTACA	1 cut(s)	840
Bsp143I	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
BspANI	GGCC	2 cut(s)	636, 962
BspCNI	CTCAG	2 cut(s)	381, 414
BspHI	TCATGA	1 cut(s)	358
BspLI	GGNNCC	1 cut(s)	160
BspMAI	CTGCAG	1 cut(s)	330
BspPI	GGATC	3 cut(s)	124, 272, 429
BspQI	GCTCTTC	1 cut(s)	189
BspT104I	TTCGAA	1 cut(s)	288
BsrDI	GCAATG	3 cut(s)	341, 748, 949
BsrGI	TGTACA	1 cut(s)	840
BsrI	ACTGG	1 cut(s)	539
BssECI	CCNNGG	1 cut(s)	234
BssMI	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
Bst2UI	CCWGG	1 cut(s)	16
Bst6I	CTCTTC	2 cut(s)	148, 189
BstAUI	TGTACA	1 cut(s)	840
BstBI	TTCGAA	1 cut(s)	288
BstC8I	GCNNGC	2 cut(s)	99, 326
BstDEI	CTNAG	4 cut(s)	122, 389, 401, 754
BstDSI	CCRYGG	1 cut(s)	234
BstF5I	GGATG	2 cut(s)	418, 511
BstH2I	RGCGCY	1 cut(s)	657
BstHHI	GCGC	1 cut(s)	656
BstKTI	GATC	6 cut(s)	39, 119, 280, 437, 627, 727
BstMBI	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
BstMWI	GCNNNNNNNGC	1 cut(s)	107
BstNI	CCWGG	1 cut(s)	16
BstSCI	CCNGG	1 cut(s)	14
BstSFI	CTRYAG	1 cut(s)	326
BstSLI	GKGCMC	1 cut(s)	744
BstV1I	GCAGC	2 cut(s)	69, 83
BstV2I	GAAGAC	2 cut(s)	17, 297
BstX2I	RGATCY	2 cut(s)	116, 434
BstYI	RGATCY	2 cut(s)	116, 434
BsuI	GTATCC	1 cut(s)	472
BsuRI	GGCC	2 cut(s)	636, 962
BtgI	CCRYGG	1 cut(s)	234
BtrI	CACGTC	1 cut(s)	966
BtsCI	GGATG	2 cut(s)	418, 511
BtsIMutI	CAGTG	2 cut(s)	897, 900
Cac8I	GCNNGC	2 cut(s)	99, 326
CciI	TCATGA	1 cut(s)	358
CfoI	GCGC	1 cut(s)	656
Cfr13I	GGNCC	1 cut(s)	960
CseI	GACGC	1 cut(s)	530
Csp6I	GTAC	2 cut(s)	340, 841
CviAII	CATG	6 cut(s)	359, 665, 733, 819, 886, 994
CviQI	GTAC	2 cut(s)	340, 841
DdeI	CTNAG	4 cut(s)	122, 389, 401, 754
DpnI	GATC	6 cut(s)	38, 118, 279, 436, 626, 726
DpnII	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
EaeI	YGGCCR	1 cut(s)	634
Eam1104I	CTCTTC	2 cut(s)	148, 189
EarI	CTCTTC	2 cut(s)	148, 189
Eco32I	GATATC	1 cut(s)	662
Eco47III	AGCGCT	1 cut(s)	655
Eco57I	CTGAAG	2 cut(s)	170, 770
EcoRII	CCWGG	1 cut(s)	14
EcoRV	GATATC	1 cut(s)	662
FaeI	CATG	6 cut(s)	362, 668, 736, 822, 889, 997
FalI	AAGNNNNNCTT	2 cut(s)	168, 200
FaqI	GGGAC	1 cut(s)	756
FatI	CATG	6 cut(s)	358, 664, 732, 818, 885, 993
Fnu4HI	GCNGC	2 cut(s)	58, 72
FokI	GGATG	2 cut(s)	425, 498
Fsp4HI	GCNGC	2 cut(s)	58, 72
FspBI	CTAG	2 cut(s)	47, 834
GlaI	GCGC	1 cut(s)	655
GluI	GCNGC	2 cut(s)	58, 72
GsuI	CTGGAG	2 cut(s)	556, 731
HaeII	RGCGCY	1 cut(s)	657
HaeIII	GGCC	2 cut(s)	636, 962
HgaI	GACGC	1 cut(s)	530
HhaI	GCGC	1 cut(s)	656
Hin1II	CATG	6 cut(s)	362, 668, 736, 822, 889, 997
Hin6I	GCGC	1 cut(s)	654
HinP1I	GCGC	1 cut(s)	654
HinfI	GANTC	5 cut(s)	90, 293, 391, 590, 605
HphI	GGTGA	5 cut(s)	215, 383, 680, 839, 982
Hpy188I	TCNGA	2 cut(s)	189, 404
Hpy188III	TCNNGA	4 cut(s)	359, 515, 710, 773
Hpy99I	CGWCG	2 cut(s)	90, 278
HpyAV	CCTTC	4 cut(s)	172, 448, 817, 934
HpyCH4IV	ACGT	1 cut(s)	965
HpyCH4V	TGCA	8 cut(s)	26, 57, 71, 328, 461, 614, 895, 952
HpyF10VI	GCNNNNNNNGC	1 cut(s)	107
HpyF3I	CTNAG	4 cut(s)	122, 389, 401, 754
HpySE526I	ACGT	1 cut(s)	965
Hsp92II	CATG	6 cut(s)	362, 668, 736, 822, 889, 997
HspAI	GCGC	1 cut(s)	654
Kzo9I	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
LguI	GCTCTTC	1 cut(s)	189
LmnI	GCTCC	2 cut(s)	158, 679
Lsp1109I	GCAGC	2 cut(s)	69, 83
LweI	GCATC	2 cut(s)	279, 403
MaeI	CTAG	2 cut(s)	47, 834
MaeII	ACGT	1 cut(s)	965
MaeIII	GTNAC	2 cut(s)	685, 793
MalI	GATC	6 cut(s)	38, 118, 279, 436, 626, 726
MboI	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
MboII	GAAGA	7 cut(s)	22, 162, 165, 176, 302, 634, 698
MflI	RGATCY	2 cut(s)	116, 434
MhlI	GDGCHC	1 cut(s)	744
MlsI	TGGCCA	1 cut(s)	636
MluCI	AATT	7 cut(s)	198, 244, 283, 407, 456, 702, 860
MluNI	TGGCCA	1 cut(s)	636
MlyI	GAGTC	2 cut(s)	287, 400
MmeI	TCCRAC	1 cut(s)	192
MnlI	CCTC	4 cut(s)	149, 362, 511, 587
Mox20I	TGGCCA	1 cut(s)	636
MscI	TGGCCA	1 cut(s)	636
MseI	TTAA	1 cut(s)	599
MslI	CAYNNNNRTG	2 cut(s)	890, 992
Msp20I	TGGCCA	1 cut(s)	636
MspR9I	CCNGG	1 cut(s)	16
MvaI	CCWGG	1 cut(s)	16
MwoI	GCNNNNNNNGC	1 cut(s)	107
NdeII	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
NlaIII	CATG	6 cut(s)	362, 668, 736, 822, 889, 997
NlaIV	GGNNCC	1 cut(s)	160
NspV	TTCGAA	1 cut(s)	288
PagI	TCATGA	1 cut(s)	358
PciSI	GCTCTTC	1 cut(s)	189
PfeI	GAWTC	3 cut(s)	90, 590, 605
PflFI	GACNNNGTC	1 cut(s)	524
PkrI	GCNGC	2 cut(s)	59, 73
PleI	GAGTC	2 cut(s)	287, 399
PpsI	GAGTC	2 cut(s)	287, 399
Psp6I	CCWGG	1 cut(s)	14
PspGI	CCWGG	1 cut(s)	14
PspN4I	GGNNCC	1 cut(s)	160
PspPI	GGNCC	1 cut(s)	960
PstI	CTGCAG	1 cut(s)	330
PsuI	RGATCY	2 cut(s)	116, 434
PsyI	GACNNNGTC	1 cut(s)	524
RsaI	GTAC	2 cut(s)	341, 842
RsaNI	GTAC	2 cut(s)	340, 841
RseI	CAYNNNNRTG	2 cut(s)	890, 992
SapI	GCTCTTC	1 cut(s)	189
SaqAI	TTAA	1 cut(s)	599
SatI	GCNGC	2 cut(s)	58, 72
Sau3AI	GATC	6 cut(s)	36, 116, 277, 434, 624, 724
Sau96I	GGNCC	1 cut(s)	960
SchI	GAGTC	2 cut(s)	287, 400
ScrFI	CCNGG	1 cut(s)	16
SduI	GDGCHC	1 cut(s)	744
SfaNI	GCATC	2 cut(s)	279, 403
SfcI	CTRYAG	1 cut(s)	326
SfuI	TTCGAA	1 cut(s)	288
SmiMI	CAYNNNNRTG	2 cut(s)	890, 992
SmlI	CTYRAG	2 cut(s)	174, 430
SmoI	CTYRAG	2 cut(s)	174, 430
Sse9I	AATT	7 cut(s)	198, 244, 283, 407, 456, 702, 860
SspI	AATATT	1 cut(s)	503
SspMI	CTAG	2 cut(s)	47, 834
StyD4I	CCNGG	1 cut(s)	14
TaiI	ACGT	1 cut(s)	968
TaqI	TCGA	2 cut(s)	273, 288
TasI	AATT	7 cut(s)	198, 244, 283, 407, 456, 702, 860
TatI	WGTACW	1 cut(s)	840
TfiI	GAWTC	3 cut(s)	90, 590, 605
Tru1I	TTAA	1 cut(s)	599
Tru9I	TTAA	1 cut(s)	599
TscAI	CASTG	2 cut(s)	897, 907
TseI	GCWGC	2 cut(s)	57, 71
TspDTI	ATGAA	5 cut(s)	23, 430, 749, 872, 874
TspRI	CASTG	2 cut(s)	897, 907
Tth111I	GACNNNGTC	1 cut(s)	524
XapI	RAATTY	1 cut(s)	283
XspI	CTAG	2 cut(s)	47, 834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.