Prupe.1G360900_v2.0.a1

cinnamyl alcohol dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012582
Physical Location & Seq
Reverse (-)
33258048 .. 33266949
8902 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G360900.2

Sequence Viewer

Length: 1086 bp
ATGGCTCAAACCACTCCAAATCATACACAGACTGTTTCTGGGTGGGCAGCTCACGATTCCTCCGGCAAGATCACCCCTTTCATCTTCAAACGAAGAGAAAATGGGATCAACGATGTGACCATAGAGGTCTTGTACTGTGGAATATGCCACACAGATCTCCACCATGTTAGGAATGACTGGGGCATTACCATGTATCCAGTAGTCCCCGGGCATGAGATTACAGGGGTGATTACGAAAGTTGGGAGCAACGTGAAGGAATTCAAGGTAGGAGATAGAGTGGGGGTGGGATGCTTGGCAGCGACATGTTTGGAGTGTGACTTCTGTAAAGACTCCCAAGAGAACTACTGCGATCAGGTCCAGTTCACCTACAATGGCATCTTCTGGGATGGTAGTATTACCTACGGTGGTTACTCCAAAATGCTTGTCGCAGATCATAGGTACGTGGTGCACATACCAGCGAACCTGCCATTGGATGCAACAGCACCGCTATTGTGCGCTGGGGTGACTGTGTTCAGCCCCATGAAAGACCACAATCTACACCAAGCACCAGGGAAGAAGATAGGGGTCGTCGGTCTGGGAGGTCTTGGACACGTGGCAGTCAAATTCGGGAAAGCCTTTGGTCATCATGTAACCGTCATCAGCACTTCTCCGTCCAAAGAGAAGGAGGCTAAAGAGCGTTTGGGTGCTGACGACTTCCTAGTCAGCACTGATGCACAACAACTTAAGAAAGGCATGAGGACGCTTGACTTCATATTAAATACGGTGTCAGCTAAGCACTCTCTTGGGCCCCTCTTAGAATTGCTCAAAGTGAATGGAACTATGGTGGTGGTGGGTGCACCAGACCAGCCCTTTGAATTGCCTTCCTTCCCTATGATATTTGGCAAGAGGGCAGTGAAGGGCAGCGTGATAGGAGGAATGAGAGACACAAAGGAGATGATGGAACTCTGCGGGAAGCATAACATAACGTGTGACATTGAGGTTACAACACCACACAAACTCGACGCGGCCTTGGACCGCGTTGCGAAAAATGATGTTCGGTATCGATTTGTCATTGACATTACTGCTGGATTACCTTCCAATCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

362

Amino Acids

39.3

Weight (kDa)

7.24

Isoelectric Point (pI)

27.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 698
Acc36I ACCTGC 1 cut(s) 471
AccII CGCG 2 cut(s) 1004, 1017
AciI CCGC 4 cut(s) 485, 948, 1004, 1015
AclWI GGATC 1 cut(s) 113
AcsI RAATTY 2 cut(s) 257, 602
AcvI CACGTG 1 cut(s) 592
AfaI GTAC 2 cut(s) 134, 440
AfiI CCNNNNNNNGG 1 cut(s) 469
AflII CTTAAG 1 cut(s) 722
AflIII ACRYGT 3 cut(s) 302, 589, 965
AgsI TTSAA 3 cut(s) 88, 262, 854
AjnI CCWGG 1 cut(s) 547
AjuI GAANNNNNNNTTGG 2 cut(s) 452, 484
AluBI AGCT 2 cut(s) 50, 770
AluI AGCT 2 cut(s) 50, 770
Alw21I GWGCWC 2 cut(s) 450, 838
Alw26I GTCTC 1 cut(s) 915
Alw44I GTGCAC 2 cut(s) 446, 834
AlwI GGATC 1 cut(s) 113
Ama87I CYCGRG 1 cut(s) 206
AoxI GGCC 2 cut(s) 785, 1005
ApaI GGGCCC 1 cut(s) 789
ApaLI GTGCAC 2 cut(s) 446, 834
ApeKI GCWGC 3 cut(s) 47, 296, 900
ApoI RAATTY 2 cut(s) 257, 602
ArsI GACNNNNNNTTYG 4 cut(s) 408, 440, 833, 865
Asp700I GAANNNNTTC 1 cut(s) 257
AspLEI GCGC 1 cut(s) 497
AspS9I GGNCC 4 cut(s) 355, 785, 786, 1012
AsuC2I CCSGG 2 cut(s) 207, 208
AsuHPI GGTGA 4 cut(s) 64, 238, 355, 514
AvaI CYCGRG 1 cut(s) 206
AvaII GGWCC 2 cut(s) 355, 1012
BaeGI GKGCMC 3 cut(s) 450, 789, 838
BanII GRGCYC 1 cut(s) 789
BbrPI CACGTG 1 cut(s) 592
Bbv12I GWGCWC 2 cut(s) 450, 838
BbvI GCAGC 3 cut(s) 59, 308, 912
BccI CCATC 2 cut(s) 380, 931
BciT130I CCWGG 1 cut(s) 549
BciVI GTATCC 1 cut(s) 204
BcnI CCSGG 2 cut(s) 207, 208
BcoDI GTCTC 1 cut(s) 915
BfaI CTAG 1 cut(s) 698
BfrI CTTAAG 1 cut(s) 722
BfuAI ACCTGC 1 cut(s) 471
BfuI GTATCC 1 cut(s) 204
BglII AGATCT 1 cut(s) 154
BisI GCNGC 4 cut(s) 48, 297, 901, 1005
BlpI GCTNAGC 1 cut(s) 771
BlsI GCNGC 4 cut(s) 49, 298, 902, 1006
Bme1390I CCNGG 3 cut(s) 207, 208, 549
Bme18I GGWCC 2 cut(s) 355, 1012
BmeT110I CYCGRG 1 cut(s) 206
BmgT120I GGNCC 4 cut(s) 355, 785, 786, 1012
BmiI GGNNCC 2 cut(s) 787, 788
BmrFI CCNGG 3 cut(s) 207, 208, 549
BmrI ACTGGG 1 cut(s) 187
BmsI GCATC 4 cut(s) 278, 384, 463, 700
BmuI ACTGGG 1 cut(s) 187
Bpu1102I GCTNAGC 1 cut(s) 771
BpuMI CCSGG 2 cut(s) 207, 208
Bsa29I ATCGAT 1 cut(s) 1042
BsaAI YACGTR 2 cut(s) 442, 592
BsaJI CCNNGG 4 cut(s) 205, 206, 548, 1008
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 261, 291
Bsc4I CCNNNNNNNGG 1 cut(s) 469
Bse1I ACTGG 3 cut(s) 182, 197, 358
BseBI CCWGG 1 cut(s) 549
BseCI ATCGAT 1 cut(s) 1042
BseDI CCNNGG 4 cut(s) 205, 206, 548, 1008
BseGI GGATG 3 cut(s) 293, 391, 478
BseLI CCNNNNNNNGG 1 cut(s) 469
BseNI ACTGG 3 cut(s) 182, 197, 358
BseSI GKGCMC 3 cut(s) 450, 789, 838
BseXI GCAGC 3 cut(s) 59, 308, 912
BseYI CCCAGC 1 cut(s) 497
Bsh1236I CGCG 2 cut(s) 1004, 1017
BshFI GGCC 2 cut(s) 787, 1007
BshVI ATCGAT 1 cut(s) 1042
BsiHKAI GWGCWC 2 cut(s) 450, 838
BsiHKCI CYCGRG 1 cut(s) 206
BsiSI CCGG 2 cut(s) 63, 207
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 1 cut(s) 469
BsmAI GTCTC 1 cut(s) 915
BsmFI GGGAC 1 cut(s) 188
BsnI GGCC 2 cut(s) 787, 1007
BsoBI CYCGRG 1 cut(s) 206
Bsp120I GGGCCC 1 cut(s) 785
Bsp1286I GDGCHC 3 cut(s) 450, 789, 838
Bsp143I GATC 5 cut(s) 69, 105, 154, 349, 430
Bsp1720I GCTNAGC 1 cut(s) 771
BspACI CCGC 4 cut(s) 485, 948, 1004, 1015
BspANI GGCC 2 cut(s) 787, 1007
BspDI ATCGAT 1 cut(s) 1042
BspFNI CGCG 2 cut(s) 1004, 1017
BspLI GGNNCC 2 cut(s) 787, 788
BspMI ACCTGC 1 cut(s) 471
BspPI GGATC 1 cut(s) 113
BspTI CTTAAG 1 cut(s) 722
BsrI ACTGG 3 cut(s) 182, 197, 358
BssECI CCNNGG 4 cut(s) 205, 206, 548, 1008
BssMI GATC 5 cut(s) 69, 105, 154, 349, 430
BssT1I CCWWGG 1 cut(s) 1008
Bst2UI CCWGG 1 cut(s) 549
Bst4CI ACNGT 6 cut(s) 34, 137, 404, 508, 634, 763
Bst6I CTCTTC 1 cut(s) 88
BstAFI CTTAAG 1 cut(s) 722
BstBAI YACGTR 2 cut(s) 442, 592
BstDEI CTNAG 2 cut(s) 771, 793
BstF5I GGATG 3 cut(s) 293, 391, 478
BstFNI CGCG 2 cut(s) 1004, 1017
BstHHI GCGC 1 cut(s) 497
BstKTI GATC 5 cut(s) 72, 108, 157, 352, 433
BstMAI GTCTC 1 cut(s) 915
BstMBI GATC 5 cut(s) 69, 105, 154, 349, 430
BstNI CCWGG 1 cut(s) 549
BstNSI RCATGY 1 cut(s) 306
BstSCI CCNGG 3 cut(s) 205, 206, 547
BstSLI GKGCMC 3 cut(s) 450, 789, 838
BstUI CGCG 2 cut(s) 1004, 1017
BstV1I GCAGC 3 cut(s) 59, 308, 912
BstX2I RGATCY 1 cut(s) 154
BstYI RGATCY 1 cut(s) 154
Bsu15I ATCGAT 1 cut(s) 1042
BsuI GTATCC 1 cut(s) 204
BsuRI GGCC 2 cut(s) 787, 1007
BsuTUI ATCGAT 1 cut(s) 1042
BtsCI GGATG 3 cut(s) 293, 391, 478
BtsI GCAGTG 1 cut(s) 897
BtsIMutI CAGTG 2 cut(s) 705, 897
BveI ACCTGC 1 cut(s) 471
CfoI GCGC 1 cut(s) 497
Cfr13I GGNCC 4 cut(s) 355, 785, 786, 1012
Cfr9I CCCGGG 1 cut(s) 206
ClaI ATCGAT 1 cut(s) 1042
CseI GACGC 2 cut(s) 748, 1010
Csp6I GTAC 2 cut(s) 133, 439
CviAII CATG 7 cut(s) 164, 190, 212, 303, 520, 626, 733
CviJI RGCY 9 cut(s) 5, 50, 516, 614, 668, 770, 787, 847, 1007
CviKI_1 RGCY 9 cut(s) 5, 50, 516, 614, 668, 770, 787, 847, 1007
CviQI GTAC 2 cut(s) 133, 439
DdeI CTNAG 2 cut(s) 771, 793
DpnI GATC 5 cut(s) 71, 107, 156, 351, 432
DpnII GATC 5 cut(s) 69, 105, 154, 349, 430
DrdI GACNNNNNNGTC 1 cut(s) 698
DseDI GACNNNNNNGTC 1 cut(s) 698
Eam1104I CTCTTC 1 cut(s) 88
EarI CTCTTC 1 cut(s) 88
Eco130I CCWWGG 1 cut(s) 1008
Eco24I GRGCYC 1 cut(s) 789
Eco47I GGWCC 2 cut(s) 355, 1012
Eco72I CACGTG 1 cut(s) 592
Eco88I CYCGRG 1 cut(s) 206
EcoO109I RGGNCCY 1 cut(s) 786
EcoRI GAATTC 1 cut(s) 257
EcoRII CCWGG 1 cut(s) 547
EcoT14I CCWWGG 1 cut(s) 1008
EcoT38I GRGCYC 1 cut(s) 789
ErhI CCWWGG 1 cut(s) 1008
FaeI CATG 7 cut(s) 167, 193, 215, 306, 523, 629, 736
FaqI GGGAC 1 cut(s) 188
FatI CATG 7 cut(s) 163, 189, 211, 302, 519, 625, 732
FauI CCCGC 1 cut(s) 941
Fnu4HI GCNGC 4 cut(s) 48, 297, 901, 1005
FokI GGATG 3 cut(s) 300, 398, 485
FriOI GRGCYC 1 cut(s) 789
Fsp4HI GCNGC 4 cut(s) 48, 297, 901, 1005
FspBI CTAG 1 cut(s) 698
GlaI GCGC 1 cut(s) 496
GluI GCNGC 4 cut(s) 48, 297, 901, 1005
GsaI CCCAGC 1 cut(s) 501
HaeIII GGCC 2 cut(s) 787, 1007
HapII CCGG 2 cut(s) 63, 207
HgaI GACGC 2 cut(s) 748, 1010
HhaI GCGC 1 cut(s) 497
Hin1II CATG 7 cut(s) 167, 193, 215, 306, 523, 629, 736
Hin6I GCGC 1 cut(s) 495
HinP1I GCGC 1 cut(s) 495
HinfI GANTC 2 cut(s) 56, 329
HpaII CCGG 2 cut(s) 63, 207
HphI GGTGA 4 cut(s) 64, 238, 355, 514
Hpy166II GTNNAC 3 cut(s) 363, 448, 836
Hpy188III TCNNGA 2 cut(s) 53, 607
Hpy8I GTNNAC 3 cut(s) 363, 448, 836
Hpy99I CGWCG 2 cut(s) 572, 1004
HpyAV CCTTC 6 cut(s) 247, 655, 870, 874, 889, 1083
HpyCH4III ACNGT 6 cut(s) 34, 137, 404, 508, 634, 763
HpyCH4IV ACGT 4 cut(s) 249, 441, 591, 965
HpyCH4V TGCA 4 cut(s) 448, 476, 713, 836
HpyF3I CTNAG 2 cut(s) 771, 793
HpySE526I ACGT 4 cut(s) 249, 441, 591, 965
Hsp92II CATG 7 cut(s) 167, 193, 215, 306, 523, 629, 736
HspAI GCGC 1 cut(s) 495
Kzo9I GATC 5 cut(s) 69, 105, 154, 349, 430
LmnI GCTCC 1 cut(s) 243
Lsp1109I GCAGC 3 cut(s) 59, 308, 912
LweI GCATC 4 cut(s) 278, 384, 463, 700
MaeI CTAG 1 cut(s) 698
MaeII ACGT 4 cut(s) 249, 441, 591, 965
MaeIII GTNAC 7 cut(s) 115, 314, 407, 502, 628, 968, 979
MalI GATC 5 cut(s) 71, 107, 156, 351, 432
MboI GATC 5 cut(s) 69, 105, 154, 349, 430
MboII GAAGA 5 cut(s) 76, 105, 370, 565, 568
MflI RGATCY 1 cut(s) 154
MhlI GDGCHC 3 cut(s) 450, 789, 838
MluCI AATT 4 cut(s) 257, 602, 797, 854
MlyI GAGTC 1 cut(s) 323
MnlI CCTC 9 cut(s) 70, 118, 572, 658, 729, 800, 879, 905, 970
MroXI GAANNNNTTC 1 cut(s) 257
MseI TTAA 2 cut(s) 723, 755
MslI CAYNNNNRTG 1 cut(s) 188
MspCI CTTAAG 1 cut(s) 722
MspI CCGG 2 cut(s) 63, 207
MspR9I CCNGG 3 cut(s) 207, 208, 549
MvaI CCWGG 1 cut(s) 549
MvnI CGCG 2 cut(s) 1004, 1017
NciI CCSGG 2 cut(s) 207, 208
NdeII GATC 5 cut(s) 69, 105, 154, 349, 430
NlaIII CATG 7 cut(s) 167, 193, 215, 306, 523, 629, 736
NlaIV GGNNCC 2 cut(s) 787, 788
NmuCI GTSAC 4 cut(s) 115, 314, 502, 968
NspI RCATGY 1 cut(s) 306
PciI ACATGT 1 cut(s) 302
PdmI GAANNNNTTC 1 cut(s) 257
PfeI GAWTC 1 cut(s) 56
PkrI GCNGC 4 cut(s) 49, 298, 902, 1006
PleI GAGTC 1 cut(s) 323
PmaCI CACGTG 1 cut(s) 592
PmlI CACGTG 1 cut(s) 592
PpsI GAGTC 1 cut(s) 323
Ppu21I YACGTR 2 cut(s) 442, 592
PscI ACATGT 1 cut(s) 302
Psp6I CCWGG 1 cut(s) 547
PspCI CACGTG 1 cut(s) 592
PspFI CCCAGC 1 cut(s) 497
PspGI CCWGG 1 cut(s) 547
PspN4I GGNNCC 2 cut(s) 787, 788
PspOMI GGGCCC 1 cut(s) 785
PspPI GGNCC 4 cut(s) 355, 785, 786, 1012
PsuI RGATCY 1 cut(s) 154
RsaI GTAC 2 cut(s) 134, 440
RsaNI GTAC 2 cut(s) 133, 439
RseI CAYNNNNRTG 1 cut(s) 188
SaqAI TTAA 2 cut(s) 723, 755
SatI GCNGC 4 cut(s) 48, 297, 901, 1005
Sau3AI GATC 5 cut(s) 69, 105, 154, 349, 430
Sau96I GGNCC 4 cut(s) 355, 785, 786, 1012
SchI GAGTC 1 cut(s) 323
ScrFI CCNGG 3 cut(s) 207, 208, 549
SduI GDGCHC 3 cut(s) 450, 789, 838
SfaNI GCATC 4 cut(s) 278, 384, 463, 700
SinI GGWCC 2 cut(s) 355, 1012
SmaI CCCGGG 1 cut(s) 208
SmiMI CAYNNNNRTG 1 cut(s) 188
SmlI CTYRAG 1 cut(s) 722
SmoI CTYRAG 1 cut(s) 722
Sse9I AATT 4 cut(s) 257, 602, 797, 854
SsiI CCGC 4 cut(s) 485, 948, 1004, 1015
SspMI CTAG 1 cut(s) 698
StyD4I CCNGG 3 cut(s) 205, 206, 547
StyI CCWWGG 1 cut(s) 1008
TaaI ACNGT 6 cut(s) 34, 137, 404, 508, 634, 763
TaiI ACGT 4 cut(s) 252, 444, 594, 968
TaqI TCGA 2 cut(s) 999, 1042
TaqII GACCGA 1 cut(s) 560
TasI AATT 4 cut(s) 257, 602, 797, 854
TatI WGTACW 1 cut(s) 132
TauI GCSGC 1 cut(s) 1007
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 2 cut(s) 723, 755
Tru9I TTAA 2 cut(s) 723, 755
TscAI CASTG 2 cut(s) 712, 897
TseFI GTSAC 4 cut(s) 115, 314, 502, 968
TseI GCWGC 3 cut(s) 47, 296, 900
Tsp45I GTSAC 4 cut(s) 115, 314, 502, 968
TspDTI ATGAA 3 cut(s) 70, 536, 739
TspGWI ACGGA 1 cut(s) 639
TspMI CCCGGG 1 cut(s) 206
TspRI CASTG 2 cut(s) 712, 897
Vha464I CTTAAG 1 cut(s) 722
VneI GTGCAC 2 cut(s) 446, 834
VpaK11BI GGWCC 2 cut(s) 355, 1012
XapI RAATTY 2 cut(s) 257, 602
XceI RCATGY 1 cut(s) 306
XmaI CCCGGG 1 cut(s) 206
XmnI GAANNNNTTC 1 cut(s) 257
XspI CTAG 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.