Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0012771

Physical Location & Seq

Genomic Coordinates Forward (+)

33550305 .. 33551364

Gene Structure 1060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G365600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 324 bp

ATGGCCATCTCAGTCTCAATCTCCTCCAGGATTGTGATTCTTGTTTCAGTACTCGTCGTTTGCCTTGTTGTTTTCAATCCTGTTGACGCTGATGAGACGGCAAACAAAAATGCAGCGCAGAGTTCTCTCCTTGATAAATTAGACTGTGGTGGAGCGTGCGCTGCTCGATGTCGTTTGTCTTCAAGGCCTCGGCTGTGCAAGAGGGCATGCGGGACTTGCTGCCAGCGCTGCAGCTGTGTTCCTCCGGGTACTGCCGGGAATCAGGAGGTCTGCCCCTGCTACGCCGCCCTCACCACCCACGGCGGCAAACGCAAGTGTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001101 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0008150 GO:0009505 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009739 GO:0009741 GO:0009826 GO:0009987 GO:0010033 GO:0014070 GO:0016043 GO:0016049 GO:0030312 GO:0032502 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0071840 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GASA

Protein Analysis

108

Amino Acids

11.16

Weight (kDa)

8.88

Isoelectric Point (pI)

51.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75750 AT1G75750
fragaria_vesca	FvH4_2g38480
malus_domestica	MD00G1092500.v1.1 MD15G1012300.v1.1 MD15G1012500.v1.1
prunus_persica	Prupe.1G365600_v2.0.a1
pyrus_communis	pycom08g01160 pycom15g01090
rosa_chinensis	RchiOBHm_Chr6g0302821
rosa_laevigata	RLG00000011135
rosa_roxburghii	Rroxscaffold_7G00165290
rosa_rugosa	Rorug06G0317500
rosa_samantha	Rh6AG430700 Rh6BG472000 Rh6CG443100 Rh6DG429800
rosa_wichuraiana	Rw6G037310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	210, 285, 303
AcoI	YGGCCR	1 cut(s)	3
AfaI	GTAC	2 cut(s)	51, 250
AfeI	AGCGCT	1 cut(s)	227
AgsI	TTSAA	2 cut(s)	76, 183
AjnI	CCWGG	1 cut(s)	26
AluBI	AGCT	1 cut(s)	234
AluI	AGCT	1 cut(s)	234
Alw26I	GTCTC	2 cut(s)	19, 89
Aor51HI	AGCGCT	1 cut(s)	227
AoxI	GGCC	2 cut(s)	3, 185
ApeKI	GCWGC	5 cut(s)	113, 161, 219, 228, 231
AspLEI	GCGC	3 cut(s)	118, 161, 228
AsuC2I	CCSGG	2 cut(s)	246, 256
AsuHPI	GGTGA	1 cut(s)	283
BalI	TGGCCA	1 cut(s)	5
BbsI	GAAGAC	1 cut(s)	171
BbvI	GCAGC	5 cut(s)	125, 148, 206, 215, 243
BccI	CCATC	1 cut(s)	14
BceAI	ACGGC	2 cut(s)	114, 316
BciT130I	CCWGG	1 cut(s)	28
BcnI	CCSGG	2 cut(s)	246, 256
BcoDI	GTCTC	2 cut(s)	19, 89
BfmI	CTRYAG	1 cut(s)	229
BfoI	RGCGCY	1 cut(s)	229
BisI	GCNGC	7 cut(s)	114, 162, 220, 229, 232, 285, 304
BlsI	GCNGC	7 cut(s)	115, 163, 221, 230, 233, 286, 305
BmcAI	AGTACT	1 cut(s)	51
Bme1390I	CCNGG	3 cut(s)	28, 246, 256
BmrFI	CCNGG	3 cut(s)	28, 246, 256
BpiI	GAAGAC	1 cut(s)	171
BpmI	CTGGAG	1 cut(s)	10
BpuMI	CCSGG	2 cut(s)	246, 256
BsaJI	CCNNGG	2 cut(s)	188, 298
BseBI	CCWGG	1 cut(s)	28
BseDI	CCNNGG	2 cut(s)	188, 298
BseMII	CTCAG	1 cut(s)	24
BseRI	GAGGAG	1 cut(s)	13
BseXI	GCAGC	5 cut(s)	125, 148, 206, 215, 243
BshFI	GGCC	2 cut(s)	5, 187
BsiSI	CCGG	2 cut(s)	245, 255
BslFI	GGGAC	1 cut(s)	226
BsmAI	GTCTC	2 cut(s)	19, 89
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	1 cut(s)	226
BsnI	GGCC	2 cut(s)	5, 187
BspACI	CCGC	3 cut(s)	210, 285, 303
BspANI	GGCC	2 cut(s)	5, 187
BspCNI	CTCAG	1 cut(s)	23
BspMAI	CTGCAG	1 cut(s)	233
BssECI	CCNNGG	2 cut(s)	188, 298
Bst2UI	CCWGG	1 cut(s)	28
Bst4CI	ACNGT	1 cut(s)	146
BstC8I	GCNNGC	3 cut(s)	157, 208, 224
BstDEI	CTNAG	1 cut(s)	10
BstDSI	CCRYGG	1 cut(s)	298
BstH2I	RGCGCY	1 cut(s)	229
BstHHI	GCGC	3 cut(s)	118, 161, 228
BstMAI	GTCTC	2 cut(s)	19, 89
BstMWI	GCNNNNNNNGC	5 cut(s)	161, 216, 225, 228, 309
BstNI	CCWGG	1 cut(s)	28
BstNSI	RCATGY	1 cut(s)	210
BstSCI	CCNGG	3 cut(s)	26, 244, 254
BstSFI	CTRYAG	1 cut(s)	229
BstV1I	GCAGC	5 cut(s)	125, 148, 206, 215, 243
BstV2I	GAAGAC	1 cut(s)	171
BsuRI	GGCC	2 cut(s)	5, 187
BtgI	CCRYGG	1 cut(s)	298
Cac8I	GCNNGC	3 cut(s)	157, 208, 224
CfoI	GCGC	3 cut(s)	118, 161, 228
CseI	GACGC	1 cut(s)	95
Csp6I	GTAC	2 cut(s)	50, 249
CviAII	CATG	1 cut(s)	207
CviJI	RGCY	4 cut(s)	5, 187, 193, 234
CviKI_1	RGCY	4 cut(s)	5, 187, 193, 234
CviQI	GTAC	2 cut(s)	50, 249
DdeI	CTNAG	1 cut(s)	10
EaeI	YGGCCR	1 cut(s)	3
Eco147I	AGGCCT	1 cut(s)	187
Eco47III	AGCGCT	1 cut(s)	227
EcoRII	CCWGG	1 cut(s)	26
Esp3I	CGTCTC	1 cut(s)	89
FaeI	CATG	1 cut(s)	210
FaiI	YATR	1 cut(s)	208
FaqI	GGGAC	1 cut(s)	226
FatI	CATG	1 cut(s)	206
FauI	CCCGC	1 cut(s)	203
Fnu4HI	GCNGC	7 cut(s)	114, 162, 220, 229, 232, 285, 304
Fsp4HI	GCNGC	7 cut(s)	114, 162, 220, 229, 232, 285, 304
GlaI	GCGC	3 cut(s)	117, 160, 227
GluI	GCNGC	7 cut(s)	114, 162, 220, 229, 232, 285, 304
GsuI	CTGGAG	1 cut(s)	10
HaeII	RGCGCY	1 cut(s)	229
HaeIII	GGCC	2 cut(s)	5, 187
HapII	CCGG	2 cut(s)	245, 255
HgaI	GACGC	1 cut(s)	95
HhaI	GCGC	3 cut(s)	118, 161, 228
Hin1II	CATG	1 cut(s)	210
Hin6I	GCGC	3 cut(s)	116, 159, 226
HinP1I	GCGC	3 cut(s)	116, 159, 226
HincII	GTYRAC	1 cut(s)	85
HindII	GTYRAC	1 cut(s)	85
HinfI	GANTC	2 cut(s)	37, 259
HpaII	CCGG	2 cut(s)	245, 255
HphI	GGTGA	1 cut(s)	283
Hpy166II	GTNNAC	1 cut(s)	85
Hpy188III	TCNNGA	1 cut(s)	263
Hpy8I	GTNNAC	1 cut(s)	85
Hpy99I	CGWCG	1 cut(s)	59
HpyCH4III	ACNGT	1 cut(s)	146
HpyCH4V	TGCA	3 cut(s)	113, 198, 231
HpyF10VI	GCNNNNNNNGC	5 cut(s)	161, 216, 225, 228, 309
HpyF3I	CTNAG	1 cut(s)	10
Hsp92II	CATG	1 cut(s)	210
HspAI	GCGC	3 cut(s)	116, 159, 226
LmnI	GCTCC	1 cut(s)	152
LpnPI	CCDG	8 cut(s)	13, 40, 93, 236, 248, 258, 268, 289
Lsp1109I	GCAGC	5 cut(s)	125, 148, 206, 215, 243
MboII	GAAGA	1 cut(s)	171
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	1 cut(s)	137
MluNI	TGGCCA	1 cut(s)	5
MnlI	CCTC	6 cut(s)	34, 195, 198, 252, 259, 299
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	234
MspI	CCGG	2 cut(s)	245, 255
MspR9I	CCNGG	3 cut(s)	28, 246, 256
MvaI	CCWGG	1 cut(s)	28
MwoI	GCNNNNNNNGC	5 cut(s)	161, 216, 225, 228, 309
NciI	CCSGG	2 cut(s)	246, 256
NlaIII	CATG	1 cut(s)	210
NmeAIII	GCCGAG	1 cut(s)	169
NspI	RCATGY	1 cut(s)	210
PaeI	GCATGC	1 cut(s)	210
PceI	AGGCCT	1 cut(s)	187
PfeI	GAWTC	2 cut(s)	37, 259
PfoI	TCCNGGA	1 cut(s)	26
PkrI	GCNGC	7 cut(s)	115, 163, 221, 230, 233, 286, 305
Psp6I	CCWGG	1 cut(s)	26
PspGI	CCWGG	1 cut(s)	26
PstI	CTGCAG	1 cut(s)	233
PvuII	CAGCTG	1 cut(s)	234
RsaI	GTAC	2 cut(s)	51, 250
RsaNI	GTAC	2 cut(s)	50, 249
SatI	GCNGC	7 cut(s)	114, 162, 220, 229, 232, 285, 304
ScaI	AGTACT	1 cut(s)	51
ScrFI	CCNGG	3 cut(s)	28, 246, 256
SetI	ASST	2 cut(s)	236, 270
SfcI	CTRYAG	1 cut(s)	229
SphI	GCATGC	1 cut(s)	210
Sse9I	AATT	1 cut(s)	137
SseBI	AGGCCT	1 cut(s)	187
SsiI	CCGC	3 cut(s)	210, 285, 303
StuI	AGGCCT	1 cut(s)	187
StyD4I	CCNGG	3 cut(s)	26, 244, 254
TaaI	ACNGT	1 cut(s)	146
TaqI	TCGA	1 cut(s)	166
TasI	AATT	1 cut(s)	137
TatI	WGTACW	1 cut(s)	49
TauI	GCSGC	2 cut(s)	287, 306
TfiI	GAWTC	2 cut(s)	37, 259
TseI	GCWGC	5 cut(s)	113, 161, 219, 228, 231
XceI	RCATGY	1 cut(s)	210
ZrmI	AGTACT	1 cut(s)	51

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.