Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009433

Physical Location & Seq

Genomic Coordinates Reverse (-)

34600747 .. 34602772

Gene Structure 2026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G386100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGGAGCTGCAATCAGTTTGTCGTGGGTTTCCCACCTCGAATTTCGGTTTATCCAGCCGCATAGTCCCTCATCAACTTGTTTTAGCAAGCCATGCTCGGCTGAGGGATCAAAGACTCCGTAAACATAATGGAATTGCTTCCAAATCATATTTGATGCCAGGATTGAAAAGTTTTGTGAATGAGTCTTCAATCCTGAGCTTGAACAGAGGAGCTATTAAGTGCGCTTCGAATTCTAGTGATGCAAAGCTGGAATTCTCAGGAGGGGAAAACTCTAATGTTCCTTTTAGAAGAGTTGATGGGGTGGAGCCTTTTCGTGGTAAATCGGGTTCAATTTCATTCCATGGGTTGACACACCAGTTGGTAGAGGAAGGGAAGTTGGTTTCAGCCCCTTTCGATGAAGTGAAGGGCTCGTTCCTTTGGTTTTTTGCCCCTGCTGCTTTAATATCGTCGTTGCTTCTTCCACAGTTCTTTATTGGTAATGCAATCGAGGCTTTCTTGAAGGACGAGATTATCATAGAAATCGTGACTTCATTATCTTATGAGGCTGCGTTTTACGTGGGCCTTGCAATATTTCTGCTTGTAACTGACCGAGTACAGAGGCCGTATCTGCAGTTCAGTACAAAGAGGTGGGGTCTCATTACTGGCCTAAGAGGATACTTGACATCCGCTTTCTTTACAACGGGCTTCAAGGTCATTGCCCCTCTATTTGCTGTTTATGTAACCTGGCCGTTGCTTGGCTTGCCGGCCTTGGTTTCTGTGGTTCCCTTTCTAGTTGGCTGTGTTGCTCAACTTGCATTTGAGACGGGTCTTGAAAAGCAAGGGTCATCTTGTTGGCCTCTAGTTCCCATTATTTTTGAGGTTTATAGACTATACCAGTTGACAAAAGCTGCTTACTTTATTGAGAAGTTGATGTATGCAATGAAGGGTATGCCTGCATCCCCGGAACTGCTAGAAAGAAGCGGTGCCCTATTTTCTATGATAGTGACCTTCCAAGTCGTCGGCGTGGTGTGCCTTTGGTCCCTGATGGCATTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTTGCCGAGAAATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

359

Amino Acids

39.7

Weight (kDa)

9.31

Isoelectric Point (pI)

43.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48460 AT1G48460
fragaria_vesca	FvH4_2g40500 FvH4_2g40500 FvH4_2g40500 FvH4_2g40500 FvH4_2g40500 FvH4_2g40500
malus_domestica	MD00G1038500.v1.1
prunus_persica	Prupe.1G386100_v2.0.a1
pyrus_communis	pycom15g02990
rosa_chinensis	RchiOBHm_Chr6g0300231
rosa_laevigata	RLG00000011355
rosa_multiflora	Rmu_sc0001670.1_g000030
rosa_roxburghii	Rroxscaffold_7G00167990
rosa_rugosa	Rorug06G0294300 Rorug06G0294400
rosa_samantha	Rh6AG406500 Rh6BG414400 Rh6CG421600 Rh6DG407200
rosa_wichuraiana	Rw6G035570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	962
AciI	CCGC	3 cut(s)	58, 666, 960
AclWI	GGATC	1 cut(s)	114
AcoI	YGGCCR	1 cut(s)	725
AcsI	RAATTY	3 cut(s)	40, 229, 251
AfaI	GTAC	2 cut(s)	594, 619
AfiI	CCNNNNNNNGG	2 cut(s)	314, 734
AgsI	TTSAA	7 cut(s)	166, 189, 202, 330, 499, 688, 812
AjnI	CCWGG	2 cut(s)	157, 722
AluBI	AGCT	5 cut(s)	7, 198, 212, 247, 887
AluI	AGCT	5 cut(s)	7, 198, 212, 247, 887
Alw26I	GTCTC	2 cut(s)	638, 794
AlwI	GGATC	1 cut(s)	114
AoxI	GGCC	6 cut(s)	559, 599, 643, 725, 744, 833
ApeKI	GCWGC	4 cut(s)	7, 434, 545, 887
ApoI	RAATTY	3 cut(s)	40, 229, 251
Asp700I	GAANNNNTTC	1 cut(s)	136
AspLEI	GCGC	1 cut(s)	224
AspS9I	GGNCC	2 cut(s)	559, 1017
AsuC2I	CCSGG	1 cut(s)	941
AsuII	TTCGAA	1 cut(s)	227
AvaII	GGWCC	1 cut(s)	1017
BaeGI	GKGCMC	1 cut(s)	967
BanI	GGYRCC	1 cut(s)	962
BanII	GRGCYC	1 cut(s)	410
BbsI	GAAGAC	1 cut(s)	177
BbvCI	CCTCAGC	1 cut(s)	101
BbvI	GCAGC	3 cut(s)	421, 532, 874
BccI	CCATC	2 cut(s)	290, 1018
BceAI	ACGGC	2 cut(s)	586, 712
BciT130I	CCWGG	2 cut(s)	159, 724
BciVI	GTATCC	1 cut(s)	647
BcnI	CCSGG	1 cut(s)	941
BcoDI	GTCTC	2 cut(s)	638, 794
BfaI	CTAG	4 cut(s)	234, 770, 839, 950
BfmI	CTRYAG	1 cut(s)	608
BfuI	GTATCC	1 cut(s)	647
BisI	GCNGC	5 cut(s)	8, 58, 435, 546, 888
BlsI	GCNGC	5 cut(s)	9, 59, 436, 547, 889
Bme1390I	CCNGG	3 cut(s)	159, 724, 941
Bme18I	GGWCC	1 cut(s)	1017
BmgT120I	GGNCC	2 cut(s)	559, 1017
BmiI	GGNNCC	4 cut(s)	306, 762, 964, 1019
BmrFI	CCNGG	3 cut(s)	159, 724, 941
BmsI	GCATC	3 cut(s)	144, 229, 944
BpiI	GAAGAC	1 cut(s)	177
Bpu10I	CCTNAGC	2 cut(s)	101, 194
Bpu14I	TTCGAA	1 cut(s)	227
BpuMI	CCSGG	1 cut(s)	941
BsaAI	YACGTR	1 cut(s)	556
BsaI	GGTCTC	1 cut(s)	638
BsaJI	CCNNGG	3 cut(s)	340, 747, 939
Bsc4I	CCNNNNNNNGG	2 cut(s)	314, 734
Bse118I	RCCGGY	1 cut(s)	742
Bse1I	ACTGG	3 cut(s)	355, 646, 874
Bse3DI	GCAATG	2 cut(s)	693, 924
BseBI	CCWGG	2 cut(s)	159, 724
BseDI	CCNNGG	3 cut(s)	340, 747, 939
BseGI	GGATG	2 cut(s)	662, 935
BseLI	CCNNNNNNNGG	2 cut(s)	314, 734
BseMI	GCAATG	2 cut(s)	693, 924
BseMII	CTCAG	3 cut(s)	92, 185, 270
BseNI	ACTGG	3 cut(s)	355, 646, 874
BseRI	GAGGAG	1 cut(s)	222
BseSI	GKGCMC	1 cut(s)	967
BseXI	GCAGC	3 cut(s)	421, 532, 874
BshFI	GGCC	6 cut(s)	561, 601, 645, 727, 746, 835
BshNI	GGYRCC	1 cut(s)	962
BsiSI	CCGG	2 cut(s)	743, 941
BslFI	GGGAC	2 cut(s)	50, 1003
BslI	CCNNNNNNNGG	2 cut(s)	314, 734
BsmAI	GTCTC	2 cut(s)	638, 794
BsmBI	CGTCTC	1 cut(s)	794
BsmFI	GGGAC	2 cut(s)	50, 1003
BsnI	GGCC	6 cut(s)	561, 601, 645, 727, 746, 835
Bso31I	GGTCTC	1 cut(s)	638
Bsp119I	TTCGAA	1 cut(s)	227
Bsp1286I	GDGCHC	2 cut(s)	410, 967
Bsp143I	GATC	1 cut(s)	106
Bsp19I	CCATGG	1 cut(s)	340
BspACI	CCGC	3 cut(s)	58, 666, 960
BspANI	GGCC	6 cut(s)	561, 601, 645, 727, 746, 835
BspCNI	CTCAG	3 cut(s)	93, 186, 269
BspLI	GGNNCC	4 cut(s)	306, 762, 964, 1019
BspMAI	CTGCAG	1 cut(s)	612
BspPI	GGATC	1 cut(s)	114
BspT104I	TTCGAA	1 cut(s)	227
BspT107I	GGYRCC	1 cut(s)	962
BspTNI	GGTCTC	1 cut(s)	638
BsrDI	GCAATG	2 cut(s)	693, 924
BsrFI	RCCGGY	1 cut(s)	742
BsrI	ACTGG	3 cut(s)	355, 646, 874
BssAI	RCCGGY	1 cut(s)	742
BssECI	CCNNGG	3 cut(s)	340, 747, 939
BssMI	GATC	1 cut(s)	106
BssT1I	CCWWGG	2 cut(s)	340, 747
Bst2UI	CCWGG	2 cut(s)	159, 724
Bst4CI	ACNGT	1 cut(s)	465
Bst6I	CTCTTC	1 cut(s)	283
BstAPI	GCANNNNNTGC	1 cut(s)	92
BstBAI	YACGTR	1 cut(s)	556
BstBI	TTCGAA	1 cut(s)	227
BstC8I	GCNNGC	4 cut(s)	88, 740, 744, 933
BstDEI	CTNAG	4 cut(s)	101, 194, 256, 647
BstDSI	CCRYGG	1 cut(s)	340
BstF5I	GGATG	2 cut(s)	662, 935
BstHHI	GCGC	1 cut(s)	224
BstKTI	GATC	1 cut(s)	109
BstMAI	GTCTC	2 cut(s)	638, 794
BstMBI	GATC	1 cut(s)	106
BstMWI	GCNNNNNNNGC	7 cut(s)	92, 434, 488, 607, 739, 791, 1008
BstNI	CCWGG	2 cut(s)	159, 724
BstSCI	CCNGG	3 cut(s)	157, 722, 939
BstSFI	CTRYAG	1 cut(s)	608
BstSLI	GKGCMC	1 cut(s)	967
BstV1I	GCAGC	3 cut(s)	421, 532, 874
BstV2I	GAAGAC	1 cut(s)	177
BsuI	GTATCC	1 cut(s)	647
BsuRI	GGCC	6 cut(s)	561, 601, 645, 727, 746, 835
BtgI	CCRYGG	1 cut(s)	340
BtsCI	GGATG	2 cut(s)	662, 935
Cac8I	GCNNGC	4 cut(s)	88, 740, 744, 933
CfoI	GCGC	1 cut(s)	224
Cfr10I	RCCGGY	1 cut(s)	742
Cfr13I	GGNCC	2 cut(s)	559, 1017
Csp6I	GTAC	2 cut(s)	593, 618
CviAII	CATG	2 cut(s)	92, 341
CviQI	GTAC	2 cut(s)	593, 618
DdeI	CTNAG	4 cut(s)	101, 194, 256, 647
DpnI	GATC	1 cut(s)	108
DpnII	GATC	1 cut(s)	106
EaeI	YGGCCR	1 cut(s)	725
Eam1104I	CTCTTC	1 cut(s)	283
EarI	CTCTTC	1 cut(s)	283
Eco130I	CCWWGG	2 cut(s)	340, 747
Eco24I	GRGCYC	1 cut(s)	410
Eco31I	GGTCTC	1 cut(s)	638
Eco47I	GGWCC	1 cut(s)	1017
EcoRI	GAATTC	2 cut(s)	229, 251
EcoRII	CCWGG	2 cut(s)	157, 722
EcoT14I	CCWWGG	2 cut(s)	340, 747
EcoT38I	GRGCYC	1 cut(s)	410
ErhI	CCWWGG	2 cut(s)	340, 747
Esp3I	CGTCTC	1 cut(s)	794
FaeI	CATG	2 cut(s)	95, 344
FaqI	GGGAC	2 cut(s)	50, 1003
FatI	CATG	2 cut(s)	91, 340
Fnu4HI	GCNGC	5 cut(s)	8, 58, 435, 546, 888
FokI	GGATG	2 cut(s)	649, 922
FriOI	GRGCYC	1 cut(s)	410
Fsp4HI	GCNGC	5 cut(s)	8, 58, 435, 546, 888
FspBI	CTAG	4 cut(s)	234, 770, 839, 950
GlaI	GCGC	1 cut(s)	223
GluI	GCNGC	5 cut(s)	8, 58, 435, 546, 888
HaeIII	GGCC	6 cut(s)	561, 601, 645, 727, 746, 835
HapII	CCGG	2 cut(s)	743, 941
HhaI	GCGC	1 cut(s)	224
Hin1II	CATG	2 cut(s)	95, 344
Hin6I	GCGC	1 cut(s)	222
HinP1I	GCGC	1 cut(s)	222
HincII	GTYRAC	2 cut(s)	348, 879
HindII	GTYRAC	2 cut(s)	348, 879
HinfI	GANTC	2 cut(s)	114, 182
HpaII	CCGG	2 cut(s)	743, 941
Hpy166II	GTNNAC	3 cut(s)	122, 348, 879
Hpy188III	TCNNGA	6 cut(s)	193, 258, 496, 523, 809, 1053
Hpy8I	GTNNAC	3 cut(s)	122, 348, 879
Hpy99I	CGWCG	2 cut(s)	451, 1001
HpyAV	CCTTC	6 cut(s)	362, 397, 493, 916, 997, 1059
HpyCH4III	ACNGT	1 cut(s)	465
HpyCH4IV	ACGT	1 cut(s)	555
HpyCH4V	TGCA	8 cut(s)	10, 242, 482, 566, 610, 794, 917, 935
HpyF10VI	GCNNNNNNNGC	7 cut(s)	92, 434, 488, 607, 739, 791, 1008
HpyF3I	CTNAG	4 cut(s)	101, 194, 256, 647
HpySE526I	ACGT	1 cut(s)	555
Hsp92II	CATG	2 cut(s)	95, 344
HspAI	GCGC	1 cut(s)	222
KroI	GCCGGC	1 cut(s)	742
KroNI	GCCGGC	1 cut(s)	744
Kzo9I	GATC	1 cut(s)	106
LmnI	GCTCC	3 cut(s)	4, 209, 304
Lsp1109I	GCAGC	3 cut(s)	421, 532, 874
LweI	GCATC	3 cut(s)	144, 229, 944
MaeI	CTAG	4 cut(s)	234, 770, 839, 950
MaeII	ACGT	1 cut(s)	555
MaeIII	GTNAC	4 cut(s)	523, 580, 718, 982
MalI	GATC	1 cut(s)	108
MboI	GATC	1 cut(s)	106
MboII	GAAGA	3 cut(s)	177, 300, 449
MhlI	GDGCHC	2 cut(s)	410, 967
MluCI	AATT	5 cut(s)	40, 132, 229, 251, 330
MlyI	GAGTC	2 cut(s)	108, 191
MroNI	GCCGGC	1 cut(s)	742
MroXI	GAANNNNTTC	1 cut(s)	136
MseI	TTAA	2 cut(s)	216, 440
MspI	CCGG	2 cut(s)	743, 941
MspR9I	CCNGG	3 cut(s)	159, 724, 941
MvaI	CCWGG	2 cut(s)	159, 724
MwoI	GCNNNNNNNGC	7 cut(s)	92, 434, 488, 607, 739, 791, 1008
NaeI	GCCGGC	1 cut(s)	744
NciI	CCSGG	1 cut(s)	941
NcoI	CCATGG	1 cut(s)	340
NdeII	GATC	1 cut(s)	106
NgoMIV	GCCGGC	1 cut(s)	742
NlaIII	CATG	2 cut(s)	95, 344
NlaIV	GGNNCC	4 cut(s)	306, 762, 964, 1019
NmeAIII	GCCGAG	1 cut(s)	76
NmuCI	GTSAC	2 cut(s)	523, 982
NspV	TTCGAA	1 cut(s)	227
PdiI	GCCGGC	1 cut(s)	744
PdmI	GAANNNNTTC	1 cut(s)	136
PkrI	GCNGC	5 cut(s)	9, 59, 436, 547, 889
PleI	GAGTC	2 cut(s)	108, 190
PpsI	GAGTC	2 cut(s)	108, 190
Ppu21I	YACGTR	1 cut(s)	556
Psp6I	CCWGG	2 cut(s)	157, 722
PspGI	CCWGG	2 cut(s)	157, 722
PspN4I	GGNNCC	4 cut(s)	306, 762, 964, 1019
PspPI	GGNCC	2 cut(s)	559, 1017
PsrI	GAACNNNNNNTAC	4 cut(s)	310, 342, 596, 628
PstI	CTGCAG	1 cut(s)	612
RsaI	GTAC	2 cut(s)	594, 619
RsaNI	GTAC	2 cut(s)	593, 618
SaqAI	TTAA	2 cut(s)	216, 440
SatI	GCNGC	5 cut(s)	8, 58, 435, 546, 888
Sau3AI	GATC	1 cut(s)	106
Sau96I	GGNCC	2 cut(s)	559, 1017
SchI	GAGTC	2 cut(s)	108, 191
ScrFI	CCNGG	3 cut(s)	159, 724, 941
SduI	GDGCHC	2 cut(s)	410, 967
SfaNI	GCATC	3 cut(s)	144, 229, 944
SfcI	CTRYAG	1 cut(s)	608
SfuI	TTCGAA	1 cut(s)	227
SinI	GGWCC	1 cut(s)	1017
Sse9I	AATT	5 cut(s)	40, 132, 229, 251, 330
SsiI	CCGC	3 cut(s)	58, 666, 960
SspI	AATATT	1 cut(s)	570
SspMI	CTAG	4 cut(s)	234, 770, 839, 950
StyD4I	CCNGG	3 cut(s)	157, 722, 939
StyI	CCWWGG	2 cut(s)	340, 747
TaaI	ACNGT	1 cut(s)	465
TaiI	ACGT	1 cut(s)	558
TaqI	TCGA	4 cut(s)	38, 227, 393, 486
TaqII	GACCGA	1 cut(s)	603
TasI	AATT	5 cut(s)	40, 132, 229, 251, 330
TatI	WGTACW	2 cut(s)	592, 617
TauI	GCSGC	1 cut(s)	60
Tru1I	TTAA	2 cut(s)	216, 440
Tru9I	TTAA	2 cut(s)	216, 440
TseFI	GTSAC	2 cut(s)	523, 982
TseI	GCWGC	4 cut(s)	7, 434, 545, 887
Tsp45I	GTSAC	2 cut(s)	523, 982
TspDTI	ATGAA	4 cut(s)	324, 411, 519, 935
TspGWI	ACGGA	1 cut(s)	107
VpaK11BI	GGWCC	1 cut(s)	1017
XapI	RAATTY	3 cut(s)	40, 229, 251
XmnI	GAANNNNTTC	1 cut(s)	136
XspI	CTAG	4 cut(s)	234, 770, 839, 950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.