Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015218

Physical Location & Seq

Genomic Coordinates Reverse (-)

34824302 .. 34826571

Gene Structure 2270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G390300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 624 bp

ATGGGTTCTACACCTAAACACCCTTTGTTTTGTCTAACATGGCCGTGGGACATGAACCAAAATGCTAAAGCTAATACTCCTAGCGCTTGCAACTTTGAGGGTCCTTGGTTATTCAAATCTCTGCAAACTATTGGGTCCATTGCTTTCAATTTTGTCAACTCAGTTTCCGGGTCCTCGTTTTCATTGGCCAATACCTTTATGCCCTCCCAGTTGGATGCAAGAACCAGCCAGCGTAACAGTTTGAAGTCAAAAACAATCTTGGGTCCTGAAGAGCAGGGGGAGGCAGAGCATAGAGCATTTGCCTCAGCTTTAGCAAGTGGGAAAGAGGCTACTGTGGTTGAGTTTTATTCACCCAAATGCGGGCTGTGTAATTCTCTGCTTAATTTTGTTAGGGAGGTTGAAGGTAGGAACTCAGACTGGCTTAACATTGTTATGGCAGATGCAGAGAACTATAAATGGCTTCCCGAGCTTCTCCATTATGACGTTAGATATGTTCCTTGCTTTGTGCTGGTGGACAAGAAGGGGAGGGCGCTGGCAAAGACTGGTATTCCGAGTAGTCGGCTACATGTAATAGCAGGTCTCTCTCATCTTCTCAAGATGAAGCGTCCTTGCAAAAAGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009636 GO:0009987 GO:0015035 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019725 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0044424 GO:0044464 GO:0045454 GO:0047134 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

208

Amino Acids

23.03

Weight (kDa)

9.17

Isoelectric Point (pI)

37.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06430
fragaria_vesca	FvH4_2g40760 FvH4_2g40760
malus_domestica	MD15G1036100.v1.1
prunus_persica	Prupe.1G390300_v2.0.a1 Prupe.1G390300_v2.0.a1
pyrus_communis	pycom15g03360
rosa_chinensis	RchiOBHm_Chr6g0299831
rosa_laevigata	RLG00000011385
rosa_roxburghii	Rroxscaffold_7G00168340
rosa_rugosa	Rorug06G0292600
rosa_samantha	Rh6AG403700 Rh6BG412000 Rh6CG418100 Rh6DG404900
rosa_wichuraiana	Rw6G035320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	566
AciI	CCGC	1 cut(s)	360
AcoI	YGGCCR	2 cut(s)	41, 186
AcuI	CTGAAG	1 cut(s)	288
AfeI	AGCGCT	1 cut(s)	85
AfiI	CCNNNNNNNGG	2 cut(s)	359, 360
AflIII	ACRYGT	1 cut(s)	565
AgsI	TTSAA	4 cut(s)	115, 148, 244, 401
AluBI	AGCT	3 cut(s)	71, 308, 469
AluI	AGCT	3 cut(s)	71, 308, 469
Alw26I	GTCTC	1 cut(s)	584
Ama87I	CYCGRG	1 cut(s)	464
Aor51HI	AGCGCT	1 cut(s)	85
AoxI	GGCC	2 cut(s)	41, 186
AspLEI	GCGC	2 cut(s)	86, 532
AspS9I	GGNCC	4 cut(s)	101, 135, 171, 263
AsuC2I	CCSGG	1 cut(s)	169
AsuHPI	GGTGA	1 cut(s)	342
AvaI	CYCGRG	1 cut(s)	464
AvaII	GGWCC	4 cut(s)	101, 135, 171, 263
BalI	TGGCCA	1 cut(s)	188
BbvCI	CCTCAGC	1 cut(s)	304
BceAI	ACGGC	1 cut(s)	28
BcnI	CCSGG	1 cut(s)	169
BcoDI	GTCTC	1 cut(s)	584
BfaI	CTAG	1 cut(s)	81
BfoI	RGCGCY	2 cut(s)	87, 533
BfuAI	ACCTGC	1 cut(s)	566
Bme1390I	CCNGG	1 cut(s)	169
Bme18I	GGWCC	4 cut(s)	101, 135, 171, 263
BmeT110I	CYCGRG	1 cut(s)	464
BmgT120I	GGNCC	4 cut(s)	101, 135, 171, 263
BmiI	GGNNCC	4 cut(s)	102, 136, 172, 264
BmrFI	CCNGG	1 cut(s)	169
BmrI	ACTGGG	1 cut(s)	202
BmsI	GCATC	2 cut(s)	205, 430
BmuI	ACTGGG	1 cut(s)	202
Bpu10I	CCTNAGC	1 cut(s)	304
BpuEI	CTTGAG	1 cut(s)	578
BpuMI	CCSGG	1 cut(s)	169
BsaI	GGTCTC	1 cut(s)	584
BsaJI	CCNNGG	2 cut(s)	44, 104
Bsc4I	CCNNNNNNNGG	2 cut(s)	359, 360
Bse1I	ACTGG	3 cut(s)	208, 422, 547
Bse3DI	GCAATG	1 cut(s)	138
BseDI	CCNNGG	2 cut(s)	44, 104
BseGI	GGATG	1 cut(s)	220
BseLI	CCNNNNNNNGG	2 cut(s)	359, 360
BseMI	GCAATG	1 cut(s)	138
BseMII	CTCAG	3 cut(s)	174, 318, 426
BseNI	ACTGG	3 cut(s)	208, 422, 547
BshFI	GGCC	2 cut(s)	43, 188
BsiHKCI	CYCGRG	1 cut(s)	464
BsiSI	CCGG	1 cut(s)	168
BslFI	GGGAC	1 cut(s)	62
BslI	CCNNNNNNNGG	2 cut(s)	359, 360
BsmAI	GTCTC	1 cut(s)	584
BsmFI	GGGAC	1 cut(s)	62
BsnI	GGCC	2 cut(s)	43, 188
Bso31I	GGTCTC	1 cut(s)	584
BsoBI	CYCGRG	1 cut(s)	464
BspACI	CCGC	1 cut(s)	360
BspANI	GGCC	2 cut(s)	43, 188
BspCNI	CTCAG	3 cut(s)	173, 317, 425
BspLI	GGNNCC	4 cut(s)	102, 136, 172, 264
BspMI	ACCTGC	1 cut(s)	566
BspQI	GCTCTTC	1 cut(s)	264
BspTNI	GGTCTC	1 cut(s)	584
BsrDI	GCAATG	1 cut(s)	138
BsrI	ACTGG	3 cut(s)	208, 422, 547
BssECI	CCNNGG	2 cut(s)	44, 104
BssT1I	CCWWGG	1 cut(s)	104
Bst4CI	ACNGT	2 cut(s)	239, 334
Bst6I	CTCTTC	1 cut(s)	264
BstC8I	GCNNGC	4 cut(s)	88, 230, 362, 534
BstDEI	CTNAG	3 cut(s)	160, 304, 412
BstDSI	CCRYGG	1 cut(s)	44
BstF5I	GGATG	1 cut(s)	220
BstH2I	RGCGCY	2 cut(s)	87, 533
BstHHI	GCGC	2 cut(s)	86, 532
BstMAI	GTCTC	1 cut(s)	584
BstMWI	GCNNNNNNNGC	1 cut(s)	466
BstNSI	RCATGY	1 cut(s)	569
BstSCI	CCNGG	1 cut(s)	167
BsuRI	GGCC	2 cut(s)	43, 188
BtgI	CCRYGG	1 cut(s)	44
BtsCI	GGATG	1 cut(s)	220
BveI	ACCTGC	1 cut(s)	566
Cac8I	GCNNGC	4 cut(s)	88, 230, 362, 534
CfoI	GCGC	2 cut(s)	86, 532
Cfr13I	GGNCC	4 cut(s)	101, 135, 171, 263
CseI	GACGC	1 cut(s)	593
CviAII	CATG	3 cut(s)	39, 52, 566
DdeI	CTNAG	3 cut(s)	160, 304, 412
EaeI	YGGCCR	2 cut(s)	41, 186
Eam1104I	CTCTTC	1 cut(s)	264
EarI	CTCTTC	1 cut(s)	264
Eco130I	CCWWGG	1 cut(s)	104
Eco31I	GGTCTC	1 cut(s)	584
Eco47I	GGWCC	4 cut(s)	101, 135, 171, 263
Eco47III	AGCGCT	1 cut(s)	85
Eco57I	CTGAAG	1 cut(s)	288
Eco88I	CYCGRG	1 cut(s)	464
EcoO109I	RGGNCCY	3 cut(s)	101, 171, 263
EcoT14I	CCWWGG	1 cut(s)	104
ErhI	CCWWGG	1 cut(s)	104
FaeI	CATG	3 cut(s)	42, 55, 569
FaiI	YATR	9 cut(s)	40, 53, 200, 291, 434, 453, 480, 492, 567
FaqI	GGGAC	1 cut(s)	62
FatI	CATG	3 cut(s)	38, 51, 565
FauI	CCCGC	1 cut(s)	353
FokI	GGATG	1 cut(s)	227
FspBI	CTAG	1 cut(s)	81
GlaI	GCGC	2 cut(s)	85, 531
HaeII	RGCGCY	2 cut(s)	87, 533
HaeIII	GGCC	2 cut(s)	43, 188
HapII	CCGG	1 cut(s)	168
HgaI	GACGC	1 cut(s)	593
HhaI	GCGC	2 cut(s)	86, 532
Hin1II	CATG	3 cut(s)	42, 55, 569
Hin6I	GCGC	2 cut(s)	84, 530
HinP1I	GCGC	2 cut(s)	84, 530
HincII	GTYRAC	1 cut(s)	157
HindII	GTYRAC	1 cut(s)	157
HpaII	CCGG	1 cut(s)	168
HphI	GGTGA	1 cut(s)	342
Hpy166II	GTNNAC	2 cut(s)	157, 514
Hpy188I	TCNGA	2 cut(s)	415, 552
Hpy188III	TCNNGA	3 cut(s)	266, 464, 595
Hpy8I	GTNNAC	2 cut(s)	157, 514
HpyAV	CCTTC	2 cut(s)	395, 514
HpyCH4III	ACNGT	2 cut(s)	239, 334
HpyCH4IV	ACGT	1 cut(s)	483
HpyCH4V	TGCA	5 cut(s)	90, 124, 218, 443, 612
HpyF10VI	GCNNNNNNNGC	1 cut(s)	466
HpyF3I	CTNAG	3 cut(s)	160, 304, 412
HpySE526I	ACGT	1 cut(s)	483
Hsp92II	CATG	3 cut(s)	42, 55, 569
HspAI	GCGC	2 cut(s)	84, 530
LguI	GCTCTTC	1 cut(s)	264
LweI	GCATC	2 cut(s)	205, 430
MaeI	CTAG	1 cut(s)	81
MaeII	ACGT	1 cut(s)	483
MaeIII	GTNAC	1 cut(s)	233
MboII	GAAGA	2 cut(s)	281, 581
MlsI	TGGCCA	1 cut(s)	188
MluCI	AATT	3 cut(s)	148, 370, 382
MluNI	TGGCCA	1 cut(s)	188
MmeI	TCCRAC	1 cut(s)	192
MnlI	CCTC	8 cut(s)	91, 184, 214, 274, 313, 319, 388, 519
Mox20I	TGGCCA	1 cut(s)	188
MscI	TGGCCA	1 cut(s)	188
MseI	TTAA	2 cut(s)	381, 423
MslI	CAYNNNNRTG	3 cut(s)	43, 355, 431
Msp20I	TGGCCA	1 cut(s)	188
MspI	CCGG	1 cut(s)	168
MspR9I	CCNGG	1 cut(s)	169
MwoI	GCNNNNNNNGC	1 cut(s)	466
NciI	CCSGG	1 cut(s)	169
NlaIII	CATG	3 cut(s)	42, 55, 569
NlaIV	GGNNCC	4 cut(s)	102, 136, 172, 264
NspI	RCATGY	1 cut(s)	569
PciI	ACATGT	1 cut(s)	565
PciSI	GCTCTTC	1 cut(s)	264
PpuMI	RGGWCCY	3 cut(s)	101, 171, 263
PscI	ACATGT	1 cut(s)	565
Psp5II	RGGWCCY	3 cut(s)	101, 171, 263
PspN4I	GGNNCC	4 cut(s)	102, 136, 172, 264
PspPI	GGNCC	4 cut(s)	101, 135, 171, 263
PspPPI	RGGWCCY	3 cut(s)	101, 171, 263
RseI	CAYNNNNRTG	3 cut(s)	43, 355, 431
SapI	GCTCTTC	1 cut(s)	264
SaqAI	TTAA	2 cut(s)	381, 423
Sau96I	GGNCC	4 cut(s)	101, 135, 171, 263
ScrFI	CCNGG	1 cut(s)	169
SetI	ASST	9 cut(s)	16, 73, 197, 310, 399, 406, 471, 486, 580
SfaNI	GCATC	2 cut(s)	205, 430
SinI	GGWCC	4 cut(s)	101, 135, 171, 263
SmiMI	CAYNNNNRTG	3 cut(s)	43, 355, 431
SmlI	CTYRAG	1 cut(s)	593
SmoI	CTYRAG	1 cut(s)	593
Sse9I	AATT	3 cut(s)	148, 370, 382
SsiI	CCGC	1 cut(s)	360
SspMI	CTAG	1 cut(s)	81
StyD4I	CCNGG	1 cut(s)	167
StyI	CCWWGG	1 cut(s)	104
TaaI	ACNGT	2 cut(s)	239, 334
TaiI	ACGT	1 cut(s)	486
TasI	AATT	3 cut(s)	148, 370, 382
Tru1I	TTAA	2 cut(s)	381, 423
Tru9I	TTAA	2 cut(s)	381, 423
TspDTI	ATGAA	3 cut(s)	68, 171, 614
VpaK11BI	GGWCC	4 cut(s)	101, 135, 171, 263
XceI	RCATGY	1 cut(s)	569
XspI	CTAG	1 cut(s)	81

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.