Prupe.1G408400_v2.0.a1
ERF Family

DDE superfamily endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015028
Physical Location & Seq
Reverse (-)
35769835 .. 35771292
1458 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G408400.1

Sequence Viewer

Length: 1458 bp
ATGAACGATAATGGCAATTCCAAGAAACGGCGTCGTAAGGGCAACAATAATAACAACGGCAACGACCAGGACGACGGTGACAAGAAGAAGAAAGACTTGAAGGGCATCATCGCTTCCCTGTCGTTGCTGGAGGAGCAAGAGAAGGAAGACGAGCAAGAGCACGACAGGGCCTCAAATGACGACGCGTCGTTTATCGAAGAGAAGCACAAGACGAGAACCAAAGCCATGTTAGATTACTACTCCGATTTCCAGGACTGCTATTCGGAGGTCGAAGAATCCGAAACGATGAAGCGAAAGCGGTCGAGAAGCGCGGCTTGCGCTGCGGCTGCGGCGGTGGCGGTGGCCGACGACGGGTCCGATAAGGCGAAACCGGGTACTGGGTCGGCGGCGGGTCATCACAGGAGGCTGTGGGTCAAGGACCGGTCCAAGGCCTGGTGGGACGAGTGCAACCAACCCGATTTTCCAGAATCGGAATTCAAGAAGGCGTTTCGGATGGGGAGGGCCACGTTCGATTTGATATGCCAGGAGCTCAAATCCGCCATTGAAAAAGAAGACACTACTCTGAGAAACGCAATACCGGTGAGGCAGAGAGTTGCTGTTTGTTTGTGGAGACTAGCAACAGGTGACCCTCTTCGCCTTGTATCTAAAAAATTTGGTCTTGGCATCTCAACTTGCCATAAACTTGTTCTTGAGGTCTGCTCTGCAATTAGAACTGTGCTCATGCCCAAGTATCTGCAATGGCCTGAGGACAGTGTGGTGAGGAAGATCAAAGATGAGTTTGAGGCCATTTCAGGCATACCCAATGTTGTGGGGTCCATGTACACAACCCATATTCCAATTATAGCTCCAAAGATCAGTGTAGCTGCTTATTTCAACAAGAGGCACACAGAGAGGAACCAGAAGACCTCTTATTCAATCACAGTGCAAGGTGTTGTGGATCCAAGAGGGGTTTTCACTGATGTGTGCATTGGTTGGCCTGGATCAATGCCTGATGATCAGGTTTTGGAGAAGTCTGCTTTGCATCAGAGGGCCAACAATGGCTTGCTGAAAGGTGTTTGGATTGTTGGGAGCTCTGGGTACCCTTTGATGGACTGGGTTTTGGTGCCCTACACCCAGCAGCATCTCACTTGGACACAGCATGCTTTCAATGAGAAGATTGGGGAGATTCAGAATGCTGCTAAAGATGCATTTGCAAGGCTAAAAGGGAGGTGGTATTGCTTGCAGAAGCGAACCGAGGTGAAGCTGCAGGACTTGCCCGTAGTGCTCGGGGCATGCTGTGTTTTGCACAACATATGCGAGCTTAGAAATGAGGAAATTGAACCAGAGCTGAGGTTTGAGCTTGTGGATGATGAGATGGTGCCAGAGGTTGCTTTGAGATCACAGAGCTCAATGAAGGCTAGGGATGCCATTGCTCATAATCTCTTGCACCATGGCCTTGCAGGCACTAGCTTTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDE_Tnp_4

Protein Analysis

486

Amino Acids

54.72

Weight (kDa)

7.57

Isoelectric Point (pI)

49.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015028)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12010
fragaria_vesca FvH4_2g31471
malus_domestica MD15G1055200.v1.1
prunus_persica Prupe.1G408400_v2.0.a1
pyrus_communis pycom08g05470 pycom15g05210
rosa_chinensis RchiOBHm_Chr6g0311321
rosa_laevigata RLG00000010417
rosa_multiflora Rmu_co8316609.1_g000001
rosa_roxburghii Rroxscaffold_7G00157760
rosa_rugosa Rorug06G0387200
rosa_samantha Rh6AG502300 Rh6BG512900 Rh6CG518600 Rh6DG504900
rosa_wichuraiana Rw6G043730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1077
AccB1I GGYRCC 3 cut(s) 1077, 1102, 1357
AccB7I CCANNNNNTGG 1 cut(s) 432
AccII CGCG 2 cut(s) 185, 311
AciI CCGC 9 cut(s) 298, 311, 323, 329, 332, 338, 386, 389, 537
AclWI GGATC 3 cut(s) 932, 945, 988
AcoI YGGCCR 1 cut(s) 342
AcsI RAATTY 2 cut(s) 473, 650
AcyI GRCGYC 1 cut(s) 31
AfaI GTAC 3 cut(s) 376, 821, 1079
AfiI CCNNNNNNNGG 6 cut(s) 27, 351, 377, 427, 432, 1087
AflIII ACRYGT 1 cut(s) 183
AgeI ACCGGT 2 cut(s) 420, 577
AgsI TTSAA 7 cut(s) 100, 478, 545, 874, 915, 1147, 1319
AhdI GACNNNNNGTC 2 cut(s) 184, 352
AjnI CCWGG 5 cut(s) 66, 249, 431, 522, 976
AjuI GAANNNNNNNTTGG 2 cut(s) 444, 476
AleI CACNNNNGTG 1 cut(s) 959
Alw21I GWGCWC 6 cut(s) 162, 531, 720, 1073, 1266, 1388
Alw26I GTCTC 1 cut(s) 604
AlwI GGATC 3 cut(s) 932, 945, 988
Ama87I CYCGRG 1 cut(s) 1265
AoxI GGCC 9 cut(s) 168, 342, 429, 501, 740, 783, 974, 1029, 1432
ApeKI GCWGC 6 cut(s) 320, 326, 863, 1117, 1175, 1243
ApoI RAATTY 2 cut(s) 473, 650
AsiGI ACCGGT 2 cut(s) 420, 577
Asp718I GGTACC 1 cut(s) 1077
AspLEI GCGC 2 cut(s) 311, 320
AspS9I GGNCC 7 cut(s) 168, 354, 418, 423, 501, 813, 1029
AsuC2I CCSGG 1 cut(s) 372
AsuHPI GGTGA 5 cut(s) 89, 592, 635, 769, 1249
AvaI CYCGRG 1 cut(s) 1265
AvaII GGWCC 4 cut(s) 354, 418, 423, 813
AxyI CCTNAGG 1 cut(s) 744
BaeGI GKGCMC 1 cut(s) 1107
BamHI GGATCC 1 cut(s) 937
BanI GGYRCC 3 cut(s) 1077, 1102, 1357
BanII GRGCYC 3 cut(s) 531, 1073, 1388
BbsI GAAGAC 3 cut(s) 153, 558, 908
Bbv12I GWGCWC 6 cut(s) 162, 531, 720, 1073, 1266, 1388
BbvCI CCTCAGC 1 cut(s) 1328
BbvI GCAGC 6 cut(s) 307, 313, 850, 1129, 1162, 1230
BccI CCATC 3 cut(s) 487, 1081, 1348
BceAI ACGGC 2 cut(s) 44, 73
BciT130I CCWGG 5 cut(s) 68, 251, 433, 524, 978
BclI TGATCA 1 cut(s) 994
BcnI CCSGG 1 cut(s) 372
BcoDI GTCTC 1 cut(s) 604
BfaI CTAG 3 cut(s) 614, 1398, 1446
BfmI CTRYAG 1 cut(s) 1244
BglI GCCNNNNNGGC 1 cut(s) 1440
Bme1390I CCNGG 6 cut(s) 68, 251, 372, 433, 524, 978
Bme18I GGWCC 4 cut(s) 354, 418, 423, 813
BmeRI GACNNNNNGTC 2 cut(s) 184, 352
BmeT110I CYCGRG 1 cut(s) 1265
BmgT120I GGNCC 7 cut(s) 168, 354, 418, 423, 501, 813, 1029
BmiI GGNNCC 7 cut(s) 355, 814, 896, 939, 1079, 1104, 1359
BmrFI CCNGG 6 cut(s) 68, 251, 372, 433, 524, 978
BmrI ACTGGG 2 cut(s) 387, 1102
BmsI GCATC 6 cut(s) 114, 672, 1030, 1129, 1174, 1393
BmuI ACTGGG 2 cut(s) 387, 1102
BpiI GAAGAC 3 cut(s) 153, 558, 908
BplI GAGNNNNNCTC 2 cut(s) 683, 715
BpmI CTGGAG 1 cut(s) 149
Bpu10I CCTNAGC 1 cut(s) 1328
BpuEI CTTGAG 1 cut(s) 710
BpuMI CCSGG 1 cut(s) 372
BsaHI GRCGYC 1 cut(s) 31
BsaJI CCNNGG 3 cut(s) 426, 1233, 1429
BsaWI WCCGGW 2 cut(s) 420, 577
Bsc4I CCNNNNNNNGG 6 cut(s) 27, 351, 377, 427, 432, 1087
Bse118I RCCGGY 2 cut(s) 420, 577
Bse1I ACTGG 2 cut(s) 382, 1097
Bse21I CCTNAGG 1 cut(s) 744
Bse3DI GCAATG 2 cut(s) 743, 1407
BseBI CCWGG 5 cut(s) 68, 251, 433, 524, 978
BseDI CCNNGG 3 cut(s) 426, 1233, 1429
BseGI GGATG 3 cut(s) 498, 1351, 1408
BseLI CCNNNNNNNGG 6 cut(s) 27, 351, 377, 427, 432, 1087
BseMI GCAATG 2 cut(s) 743, 1407
BseMII CTCAG 3 cut(s) 554, 735, 1319
BseNI ACTGG 2 cut(s) 382, 1097
BseRI GAGGAG 1 cut(s) 146
BseSI GKGCMC 1 cut(s) 1107
BseXI GCAGC 6 cut(s) 307, 313, 850, 1129, 1162, 1230
BseYI CCCAGC 1 cut(s) 1113
Bsh1236I CGCG 2 cut(s) 185, 311
Bsh1285I CGRYCG 1 cut(s) 302
BshFI GGCC 9 cut(s) 170, 344, 431, 503, 742, 785, 976, 1031, 1434
BshNI GGYRCC 3 cut(s) 1077, 1102, 1357
BshTI ACCGGT 2 cut(s) 420, 577
BsiEI CGRYCG 1 cut(s) 302
BsiHKAI GWGCWC 6 cut(s) 162, 531, 720, 1073, 1266, 1388
BsiHKCI CYCGRG 1 cut(s) 1265
BsiSI CCGG 3 cut(s) 371, 421, 578
BslFI GGGAC 1 cut(s) 452
BslI CCNNNNNNNGG 6 cut(s) 27, 351, 377, 427, 432, 1087
BsmAI GTCTC 1 cut(s) 604
BsmFI GGGAC 1 cut(s) 452
BsmI GAATGC 1 cut(s) 1177
BsnI GGCC 9 cut(s) 170, 344, 431, 503, 742, 785, 976, 1031, 1434
BsoBI CYCGRG 1 cut(s) 1265
Bsp1286I GDGCHC 7 cut(s) 162, 531, 720, 1073, 1107, 1266, 1388
Bsp1407I TGTACA 1 cut(s) 819
Bsp143I GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
Bsp19I CCATGG 1 cut(s) 1429
BspACI CCGC 9 cut(s) 298, 311, 323, 329, 332, 338, 386, 389, 537
BspANI GGCC 9 cut(s) 170, 344, 431, 503, 742, 785, 976, 1031, 1434
BspCNI CTCAG 3 cut(s) 555, 736, 1320
BspFNI CGCG 2 cut(s) 185, 311
BspLI GGNNCC 7 cut(s) 355, 814, 896, 939, 1079, 1104, 1359
BspMAI CTGCAG 1 cut(s) 1248
BspPI GGATC 3 cut(s) 932, 945, 988
BspT107I GGYRCC 3 cut(s) 1077, 1102, 1357
BsrDI GCAATG 2 cut(s) 743, 1407
BsrFI RCCGGY 2 cut(s) 420, 577
BsrGI TGTACA 1 cut(s) 819
BsrI ACTGG 2 cut(s) 382, 1097
BssAI RCCGGY 2 cut(s) 420, 577
BssECI CCNNGG 3 cut(s) 426, 1233, 1429
BssMI GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
BssNI GRCGYC 1 cut(s) 31
BssT1I CCWWGG 2 cut(s) 426, 1429
Bst2UI CCWGG 5 cut(s) 68, 251, 433, 524, 978
Bst4CI ACNGT 4 cut(s) 77, 715, 752, 922
Bst6I CTCTTC 2 cut(s) 192, 636
BstACI GRCGYC 1 cut(s) 31
BstAPI GCANNNNNTGC 1 cut(s) 1252
BstAUI TGTACA 1 cut(s) 819
BstC8I GCNNGC 7 cut(s) 316, 1043, 1140, 1220, 1273, 1298, 1441
BstDEI CTNAG 4 cut(s) 563, 744, 1301, 1328
BstDSI CCRYGG 1 cut(s) 1429
BstEII GGTNACC 1 cut(s) 623
BstF5I GGATG 3 cut(s) 498, 1351, 1408
BstFNI CGCG 2 cut(s) 185, 311
BstHHI GCGC 2 cut(s) 311, 320
BstKTI GATC 6 cut(s) 768, 855, 940, 983, 997, 1379
BstMAI GTCTC 1 cut(s) 604
BstMBI GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
BstMCI CGRYCG 1 cut(s) 302
BstNI CCWGG 5 cut(s) 68, 251, 433, 524, 978
BstNSI RCATGY 2 cut(s) 1142, 1275
BstPI GGTNACC 1 cut(s) 623
BstSCI CCNGG 6 cut(s) 66, 249, 370, 431, 522, 976
BstSFI CTRYAG 1 cut(s) 1244
BstSLI GKGCMC 1 cut(s) 1107
BstUI CGCG 2 cut(s) 185, 311
BstV1I GCAGC 6 cut(s) 307, 313, 850, 1129, 1162, 1230
BstV2I GAAGAC 3 cut(s) 153, 558, 908
BstX2I RGATCY 1 cut(s) 937
BstXI CCANNNNNNTGG 1 cut(s) 808
BstYI RGATCY 1 cut(s) 937
Bsu36I CCTNAGG 1 cut(s) 744
BsuRI GGCC 9 cut(s) 170, 344, 431, 503, 742, 785, 976, 1031, 1434
BtgI CCRYGG 1 cut(s) 1429
BtgZI GCGATG 1 cut(s) 94
BtsCI GGATG 3 cut(s) 498, 1351, 1408
BtsIMutI CAGTG 4 cut(s) 757, 862, 927, 954
Cac8I GCNNGC 7 cut(s) 316, 1043, 1140, 1220, 1273, 1298, 1441
CfoI GCGC 2 cut(s) 311, 320
Cfr10I RCCGGY 2 cut(s) 420, 577
Cfr13I GGNCC 7 cut(s) 168, 354, 418, 423, 501, 813, 1029
CseI GACGC 3 cut(s) 20, 174, 191
Csp6I GTAC 3 cut(s) 375, 820, 1078
CspAI ACCGGT 2 cut(s) 420, 577
CviAII CATG 6 cut(s) 226, 721, 817, 1139, 1272, 1430
CviQI GTAC 3 cut(s) 375, 820, 1078
DdeI CTNAG 4 cut(s) 563, 744, 1301, 1328
DpnI GATC 6 cut(s) 767, 854, 939, 982, 996, 1378
DpnII GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
DriI GACNNNNNGTC 2 cut(s) 184, 352
EaeI YGGCCR 1 cut(s) 342
Eam1104I CTCTTC 2 cut(s) 192, 636
Eam1105I GACNNNNNGTC 2 cut(s) 184, 352
EarI CTCTTC 2 cut(s) 192, 636
EciI GGCGGA 1 cut(s) 526
Ecl136II GAGCTC 3 cut(s) 529, 1071, 1386
Eco130I CCWWGG 2 cut(s) 426, 1429
Eco147I AGGCCT 1 cut(s) 431
Eco24I GRGCYC 3 cut(s) 531, 1073, 1388
Eco47I GGWCC 4 cut(s) 354, 418, 423, 813
Eco53kI GAGCTC 3 cut(s) 529, 1071, 1386
Eco81I CCTNAGG 1 cut(s) 744
Eco88I CYCGRG 1 cut(s) 1265
Eco91I GGTNACC 1 cut(s) 623
EcoICRI GAGCTC 3 cut(s) 529, 1071, 1386
EcoO109I RGGNCCY 1 cut(s) 168
EcoO65I GGTNACC 1 cut(s) 623
EcoRI GAATTC 1 cut(s) 473
EcoRII CCWGG 5 cut(s) 66, 249, 431, 522, 976
EcoT14I CCWWGG 2 cut(s) 426, 1429
EcoT22I ATGCAT 1 cut(s) 1189
EcoT38I GRGCYC 3 cut(s) 531, 1073, 1388
ErhI CCWWGG 2 cut(s) 426, 1429
FaeI CATG 6 cut(s) 229, 724, 820, 1142, 1275, 1433
FalI AAGNNNNNCTT 4 cut(s) 80, 112, 298, 330
FaqI GGGAC 1 cut(s) 452
FatI CATG 6 cut(s) 225, 720, 816, 1138, 1271, 1429
FauI CCCGC 1 cut(s) 382
FauNDI CATATG 1 cut(s) 1292
FbaI TGATCA 1 cut(s) 994
FokI GGATG 3 cut(s) 505, 1358, 1415
FriOI GRGCYC 3 cut(s) 531, 1073, 1388
FspBI CTAG 3 cut(s) 614, 1398, 1446
GlaI GCGC 2 cut(s) 310, 319
GsaI CCCAGC 1 cut(s) 1117
GsuI CTGGAG 1 cut(s) 149
HaeIII GGCC 9 cut(s) 170, 344, 431, 503, 742, 785, 976, 1031, 1434
HapII CCGG 3 cut(s) 371, 421, 578
HgaI GACGC 3 cut(s) 20, 174, 191
HhaI GCGC 2 cut(s) 311, 320
Hin1I GRCGYC 1 cut(s) 31
Hin1II CATG 6 cut(s) 229, 724, 820, 1142, 1275, 1433
Hin6I GCGC 2 cut(s) 309, 318
HinP1I GCGC 2 cut(s) 309, 318
HinfI GANTC 3 cut(s) 275, 467, 1165
HpaII CCGG 3 cut(s) 371, 421, 578
HphI GGTGA 5 cut(s) 89, 592, 635, 769, 1249
Hpy166II GTNNAC 1 cut(s) 822
Hpy188I TCNGA 9 cut(s) 244, 265, 280, 358, 472, 492, 564, 1026, 1170
Hpy188III TCNNGA 4 cut(s) 303, 464, 478, 689
Hpy8I GTNNAC 1 cut(s) 822
Hpy99I CGWCG 6 cut(s) 36, 77, 185, 190, 350, 353
HpyAV CCTTC 4 cut(s) 94, 136, 475, 1387
HpyCH4III ACNGT 4 cut(s) 77, 715, 752, 922
HpyCH4IV ACGT 1 cut(s) 506
HpyF3I CTNAG 4 cut(s) 563, 744, 1301, 1328
HpySE526I ACGT 1 cut(s) 506
Hsp92I GRCGYC 1 cut(s) 31
Hsp92II CATG 6 cut(s) 229, 724, 820, 1142, 1275, 1433
HspAI GCGC 2 cut(s) 309, 318
KpnI GGTACC 1 cut(s) 1081
Ksp22I TGATCA 1 cut(s) 994
Kzo9I GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
LmnI GCTCC 4 cut(s) 133, 526, 850, 1068
Lsp1109I GCAGC 6 cut(s) 307, 313, 850, 1129, 1162, 1230
LweI GCATC 6 cut(s) 114, 672, 1030, 1129, 1174, 1393
MaeI CTAG 3 cut(s) 614, 1398, 1446
MaeII ACGT 1 cut(s) 506
MaeIII GTNAC 2 cut(s) 77, 623
MalI GATC 6 cut(s) 767, 854, 939, 982, 996, 1378
MboI GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
MflI RGATCY 1 cut(s) 937
MhlI GDGCHC 7 cut(s) 162, 531, 720, 1073, 1107, 1266, 1388
MluCI AATT 6 cut(s) 16, 473, 650, 705, 837, 1314
MluI ACGCGT 1 cut(s) 183
Mph1103I ATGCAT 1 cut(s) 1189
MslI CAYNNNNRTG 1 cut(s) 959
MspI CCGG 3 cut(s) 371, 421, 578
MspR9I CCNGG 6 cut(s) 68, 251, 372, 433, 524, 978
Mva1269I GAATGC 1 cut(s) 1177
MvaI CCWGG 5 cut(s) 68, 251, 433, 524, 978
MvnI CGCG 2 cut(s) 185, 311
NciI CCSGG 1 cut(s) 372
NcoI CCATGG 1 cut(s) 1429
NdeI CATATG 1 cut(s) 1292
NdeII GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
NlaIII CATG 6 cut(s) 229, 724, 820, 1142, 1275, 1433
NlaIV GGNNCC 7 cut(s) 355, 814, 896, 939, 1079, 1104, 1359
NmuCI GTSAC 2 cut(s) 77, 623
NsiI ATGCAT 1 cut(s) 1189
NspI RCATGY 2 cut(s) 1142, 1275
OliI CACNNNNGTG 1 cut(s) 959
PaeI GCATGC 2 cut(s) 1142, 1275
PceI AGGCCT 1 cut(s) 431
PcsI WCGNNNNNNNCGW 3 cut(s) 69, 276, 354
PctI GAATGC 1 cut(s) 1177
PfeI GAWTC 3 cut(s) 275, 467, 1165
PflMI CCANNNNNTGG 1 cut(s) 432
PfoI TCCNGGA 1 cut(s) 249
PinAI ACCGGT 2 cut(s) 420, 577
Psp124BI GAGCTC 3 cut(s) 531, 1073, 1388
Psp6I CCWGG 5 cut(s) 66, 249, 431, 522, 976
PspEI GGTNACC 1 cut(s) 623
PspFI CCCAGC 1 cut(s) 1113
PspGI CCWGG 5 cut(s) 66, 249, 431, 522, 976
PspN4I GGNNCC 7 cut(s) 355, 814, 896, 939, 1079, 1104, 1359
PspPI GGNCC 7 cut(s) 168, 354, 418, 423, 501, 813, 1029
PstI CTGCAG 1 cut(s) 1248
PsuI RGATCY 1 cut(s) 937
RsaI GTAC 3 cut(s) 376, 821, 1079
RsaNI GTAC 3 cut(s) 375, 820, 1078
RseI CAYNNNNRTG 1 cut(s) 959
SacI GAGCTC 3 cut(s) 531, 1073, 1388
Sau3AI GATC 6 cut(s) 765, 852, 937, 980, 994, 1376
Sau96I GGNCC 7 cut(s) 168, 354, 418, 423, 501, 813, 1029
ScrFI CCNGG 6 cut(s) 68, 251, 372, 433, 524, 978
SduI GDGCHC 7 cut(s) 162, 531, 720, 1073, 1107, 1266, 1388
SfaNI GCATC 6 cut(s) 114, 672, 1030, 1129, 1174, 1393
SfcI CTRYAG 1 cut(s) 1244
SinI GGWCC 4 cut(s) 354, 418, 423, 813
SmiMI CAYNNNNRTG 1 cut(s) 959
SmlI CTYRAG 1 cut(s) 689
SmoI CTYRAG 1 cut(s) 689
SphI GCATGC 2 cut(s) 1142, 1275
Sse9I AATT 6 cut(s) 16, 473, 650, 705, 837, 1314
SseBI AGGCCT 1 cut(s) 431
SsiI CCGC 9 cut(s) 298, 311, 323, 329, 332, 338, 386, 389, 537
SspMI CTAG 3 cut(s) 614, 1398, 1446
SstI GAGCTC 3 cut(s) 531, 1073, 1388
StuI AGGCCT 1 cut(s) 431
StyD4I CCNGG 6 cut(s) 66, 249, 370, 431, 522, 976
StyI CCWWGG 2 cut(s) 426, 1429
TaaI ACNGT 4 cut(s) 77, 715, 752, 922
TaiI ACGT 1 cut(s) 509
TaqI TCGA 4 cut(s) 195, 270, 302, 510
TasI AATT 6 cut(s) 16, 473, 650, 705, 837, 1314
TatI WGTACW 1 cut(s) 819
TauI GCSGC 4 cut(s) 314, 326, 332, 389
TfiI GAWTC 3 cut(s) 275, 467, 1165
TscAI CASTG 4 cut(s) 757, 862, 927, 961
TseFI GTSAC 2 cut(s) 77, 623
TseI GCWGC 6 cut(s) 320, 326, 863, 1117, 1175, 1243
Tsp45I GTSAC 2 cut(s) 77, 623
TspDTI ATGAA 3 cut(s) 17, 302, 1406
TspRI CASTG 4 cut(s) 757, 862, 927, 961
Van91I CCANNNNNTGG 1 cut(s) 432
VpaK11BI GGWCC 4 cut(s) 354, 418, 423, 813
XapI RAATTY 2 cut(s) 473, 650
XceI RCATGY 2 cut(s) 1142, 1275
XspI CTAG 3 cut(s) 614, 1398, 1446
Zsp2I ATGCAT 1 cut(s) 1189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.