Rroxscaffold_7G00157760
ERF Family

DDE superfamily endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0015028
Physical Location & Seq
Reverse (-)
1474921 .. 1476861
1941 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00157760.1

Sequence Viewer

Length: 1269 bp
ATGAAATTGAAACCCATACCCAACCCGGACCCAGACCAACCCGACCTCTCCTACATCTACTCCTTCCTCCACTCCTCTCTCCACCACCAGATGAACAATGATACCGCCAAGAAACGCCGTCGTAAGACCGCCGACGACGACGGCCCGCCGGGAAAGCAAGGCAAGATGAAGGACCTGAAGGGCATCATCACCACCCTGTCGCTGCTGGAGCAGCAGGAGAAGGAGGACCTCGACCGGGCCTCAAATGACGACAAGTCGTTTGCCGAAGAGAAGCAGAAGCAGACGACGAAGACCAAGGCCATGGTGGAGTACTACTCCGATTTGCAGGGCTACTACTCGGACGTCGAGGAGTCCGAGACCGTGAAGCGCAAGAAGTCGAGAAACGCGGCCACCGCGGCGGTTGCGGCGGCGGCGGTTGACGCCTCCGAAAAGGGCGCGAAACCCGGAGGAAGCGGGTCGGGTCACCAGCGGAGGCTTTGGGTCAAGGACCGGTCCAAGGCCTGGTGGGACGAGTGTAACCAACCCGATTTCCCGGAAGAGGAATTCAAGAAAGCCTTCCGGATGGGGAAGGCCACGTTCGATTTGATCTGCGACGAGCTCAATTCGGCTATAGCGAAAGAGGACACCACTCTCCGGAATGCAATTCCGGTCCGGCAGAGAGTCGCCGTCTGTTTGTGGAGGTTGGCTACCGGCGACCCGCTCCGGCTCGTTTCGAAGCGATTTGGGTTAGGGATATCGACTTGTCATAAGCTAGTACTGGAAGTCTGCTCGGCTATTAGGACTGTGTTGATGCCCAAGTACTTGAATTGGCCGGAGGATGGTGTTTTGAGGAAGGTGAAGGACGAGTTCGAGTCGTTTTCGGGTATACCTAATGTTGTAGGGTCTATGTACACTACTCATATTCCGATCATAGCTCCGAAGATTAGTGTGGCAGCTTATTTTAACAAGAGGCATACAGAGAGGAACCAGAAGACTAGCTACTCCATCACTGTGCAAGGTGTGGTGAATCCGAAAGGGGTGTTCACTGATGTGTGTATAGGGTGGCCTGGTTCAATGCCGGATGATCAGGTTCTGGAGAAGTCGGCTTTGCATCAGAGGGCGGGGAATGGTTTGCTTAAAGGTGTGTGGATTGTGGGGGTTCGGGGTACCCTTTGCTGGATTGGGTGCTGGTGCCGTATATTCAGCAGAATCTTACTTGGACGCAGCATGCGTTCAATGAGAAGATTGGGGAGATTCAGAATGTGTCGAAAGATGCGTTTGCGAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDE_Tnp_4

Protein Analysis

422

Amino Acids

47.66

Weight (kDa)

9.57

Isoelectric Point (pI)

42.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8040 PF26138 179 - 259 6e-06 Domain of unknown function (DUF8040)
DDE_Tnp_4 PF13359 297 - 379 8.3e-12 DDE superfamily endonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015028)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12010
fragaria_vesca FvH4_2g31471
malus_domestica MD15G1055200.v1.1
prunus_persica Prupe.1G408400_v2.0.a1
pyrus_communis pycom08g05470 pycom15g05210
rosa_chinensis RchiOBHm_Chr6g0311321
rosa_laevigata RLG00000010417
rosa_multiflora Rmu_co8316609.1_g000001
rosa_roxburghii Rroxscaffold_7G00157760
rosa_rugosa Rorug06G0387200
rosa_samantha Rh6AG502300 Rh6BG512900 Rh6CG518600 Rh6DG504900
rosa_wichuraiana Rw6G043730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 345
Acc65I GGTACC 1 cut(s) 1145
AccB1I GGYRCC 2 cut(s) 1145, 1170
AccB7I CCANNNNNTGG 1 cut(s) 501
AccBSI CCGCTC 1 cut(s) 700
AccI GTMKAC 1 cut(s) 865
AccII CGCG 3 cut(s) 386, 395, 437
AccIII TCCGGA 2 cut(s) 558, 633
AcoI YGGCCR 2 cut(s) 387, 809
AcsI RAATTY 1 cut(s) 542
AcuI CTGAAG 1 cut(s) 197
AcyI GRCGYC 2 cut(s) 342, 420
AfaI GTAC 5 cut(s) 311, 756, 800, 890, 1147
AfiI CCNNNNNNNGG 7 cut(s) 235, 496, 501, 538, 633, 818, 1155
AgeI ACCGGT 1 cut(s) 489
AgsI TTSAA 5 cut(s) 10, 547, 805, 1053, 1215
AhdI GACNNNNNGTC 1 cut(s) 253
AjnI CCWGG 2 cut(s) 500, 1045
AleI CACNNNNGTG 1 cut(s) 1028
AluBI AGCT 5 cut(s) 598, 751, 914, 935, 978
AluI AGCT 5 cut(s) 598, 751, 914, 935, 978
Alw21I GWGCWC 1 cut(s) 600
Alw26I GTCTC 1 cut(s) 350
AlwNI CAGNNNCTG 1 cut(s) 1072
Aor13HI TCCGGA 2 cut(s) 558, 633
AoxI GGCC 8 cut(s) 142, 237, 297, 387, 498, 570, 809, 1043
ApeKI GCWGC 4 cut(s) 202, 211, 932, 1203
ApoI RAATTY 1 cut(s) 542
ArsI GACNNNNNNTTYG 2 cut(s) 242, 274
AsiGI ACCGGT 1 cut(s) 489
Asp700I GAANNNNTTC 1 cut(s) 554
Asp718I GGTACC 1 cut(s) 1145
AspLEI GCGC 2 cut(s) 369, 437
AspS9I GGNCC 8 cut(s) 28, 143, 172, 226, 237, 487, 492, 649
AsuC2I CCSGG 5 cut(s) 26, 150, 236, 444, 533
AsuHPI GGTGA 4 cut(s) 181, 455, 847, 1015
AsuII TTCGAA 1 cut(s) 713
AvaII GGWCC 6 cut(s) 28, 172, 226, 487, 492, 649
BanI GGYRCC 2 cut(s) 1145, 1170
BanII GRGCYC 1 cut(s) 600
BarI GAAGNNNNNNTAC 2 cut(s) 962, 994
BbsI GAAGAC 2 cut(s) 296, 977
Bbv12I GWGCWC 1 cut(s) 600
BbvI GCAGC 4 cut(s) 189, 223, 944, 1215
BccI CCATC 3 cut(s) 556, 812, 992
BceAI ACGGC 4 cut(s) 102, 157, 650, 1158
BciT130I CCWGG 2 cut(s) 502, 1047
BclI TGATCA 1 cut(s) 1063
BcnI CCSGG 5 cut(s) 26, 150, 236, 444, 533
BcoDI GTCTC 1 cut(s) 350
BfaI CTAG 2 cut(s) 752, 975
BfmI CTRYAG 1 cut(s) 609
BglI GCCNNNNNGGC 1 cut(s) 395
BisI GCNGC 9 cut(s) 203, 212, 387, 396, 405, 408, 411, 933, 1204
BlsI GCNGC 9 cut(s) 204, 213, 388, 397, 406, 409, 412, 934, 1205
BmcAI AGTACT 3 cut(s) 311, 756, 800
Bme1390I CCNGG 7 cut(s) 26, 150, 236, 444, 502, 533, 1047
Bme18I GGWCC 6 cut(s) 28, 172, 226, 487, 492, 649
BmeRI GACNNNNNGTC 1 cut(s) 253
BmgT120I GGNCC 8 cut(s) 28, 143, 172, 226, 237, 487, 492, 649
BmiI GGNNCC 4 cut(s) 30, 965, 1147, 1172
BmrFI CCNGG 7 cut(s) 26, 150, 236, 444, 502, 533, 1047
BmsI GCATC 4 cut(s) 192, 780, 1099, 1242
BpiI GAAGAC 2 cut(s) 296, 977
BplI GAGNNNNNCTC 2 cut(s) 299, 331
BpmI CTGGAG 2 cut(s) 227, 1094
Bpu14I TTCGAA 1 cut(s) 713
BpuMI CCSGG 5 cut(s) 26, 150, 236, 444, 533
BsaHI GRCGYC 2 cut(s) 342, 420
BsaI GGTCTC 1 cut(s) 350
BsaJI CCNNGG 4 cut(s) 294, 300, 393, 495
BsaWI WCCGGW 4 cut(s) 489, 558, 633, 646
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bsc4I CCNNNNNNNGG 7 cut(s) 235, 496, 501, 538, 633, 818, 1155
Bse118I RCCGGY 2 cut(s) 489, 689
Bse1I ACTGG 1 cut(s) 762
BseAI TCCGGA 2 cut(s) 558, 633
BseBI CCWGG 2 cut(s) 502, 1047
BseDI CCNNGG 4 cut(s) 294, 300, 393, 495
BseGI GGATG 3 cut(s) 567, 823, 1066
BseLI CCNNNNNNNGG 7 cut(s) 235, 496, 501, 538, 633, 818, 1155
BseNI ACTGG 1 cut(s) 762
BseRI GAGGAG 2 cut(s) 64, 362
BseXI GCAGC 4 cut(s) 189, 223, 944, 1215
Bsh1236I CGCG 3 cut(s) 386, 395, 437
Bsh1285I CGRYCG 1 cut(s) 235
BshFI GGCC 8 cut(s) 144, 239, 299, 389, 500, 572, 811, 1045
BshNI GGYRCC 2 cut(s) 1145, 1170
BshTI ACCGGT 1 cut(s) 489
BsiEI CGRYCG 1 cut(s) 235
BsiHKAI GWGCWC 1 cut(s) 600
BslFI GGGAC 1 cut(s) 521
BslI CCNNNNNNNGG 7 cut(s) 235, 496, 501, 538, 633, 818, 1155
BsmAI GTCTC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 521
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 8 cut(s) 144, 239, 299, 389, 500, 572, 811, 1045
Bso31I GGTCTC 1 cut(s) 350
Bsp119I TTCGAA 1 cut(s) 713
Bsp1286I GDGCHC 1 cut(s) 600
Bsp13I TCCGGA 2 cut(s) 558, 633
Bsp1407I TGTACA 1 cut(s) 888
Bsp143I GATC 3 cut(s) 585, 906, 1063
Bsp19I CCATGG 1 cut(s) 300
BspANI GGCC 8 cut(s) 144, 239, 299, 389, 500, 572, 811, 1045
BspEI TCCGGA 2 cut(s) 558, 633
BspFNI CGCG 3 cut(s) 386, 395, 437
BspLI GGNNCC 4 cut(s) 30, 965, 1147, 1172
BspT104I TTCGAA 1 cut(s) 713
BspT107I GGYRCC 2 cut(s) 1145, 1170
BspTNI GGTCTC 1 cut(s) 350
BsrBI CCGCTC 1 cut(s) 700
BsrFI RCCGGY 2 cut(s) 489, 689
BsrGI TGTACA 1 cut(s) 888
BsrI ACTGG 1 cut(s) 762
BssAI RCCGGY 2 cut(s) 489, 689
BssECI CCNNGG 4 cut(s) 294, 300, 393, 495
BssMI GATC 3 cut(s) 585, 906, 1063
BssNAI GTATAC 1 cut(s) 866
BssNI GRCGYC 2 cut(s) 342, 420
BssT1I CCWWGG 3 cut(s) 294, 300, 495
Bst1107I GTATAC 1 cut(s) 866
Bst2UI CCWGG 2 cut(s) 502, 1047
Bst4CI ACNGT 3 cut(s) 361, 784, 991
Bst6I CTCTTC 2 cut(s) 261, 531
BstACI GRCGYC 2 cut(s) 342, 420
BstAUI TGTACA 1 cut(s) 888
BstBI TTCGAA 1 cut(s) 713
BstC8I GCNNGC 2 cut(s) 146, 1208
BstDSI CCRYGG 2 cut(s) 300, 393
BstEII GGTNACC 1 cut(s) 461
BstF5I GGATG 3 cut(s) 567, 823, 1066
BstFNI CGCG 3 cut(s) 386, 395, 437
BstHHI GCGC 2 cut(s) 369, 437
BstKTI GATC 3 cut(s) 588, 909, 1066
BstMAI GTCTC 1 cut(s) 350
BstMBI GATC 3 cut(s) 585, 906, 1063
BstMCI CGRYCG 1 cut(s) 235
BstMWI GCNNNNNNNGC 9 cut(s) 154, 208, 211, 392, 395, 401, 404, 410, 419
BstNI CCWGG 2 cut(s) 502, 1047
BstNSI RCATGY 1 cut(s) 1210
BstPI GGTNACC 1 cut(s) 461
BstSCI CCNGG 7 cut(s) 24, 148, 234, 442, 500, 531, 1045
BstSFI CTRYAG 1 cut(s) 609
BstUI CGCG 3 cut(s) 386, 395, 437
BstV1I GCAGC 4 cut(s) 189, 223, 944, 1215
BstV2I GAAGAC 2 cut(s) 296, 977
BstXI CCANNNNNNTGG 1 cut(s) 301
BstZ17I GTATAC 1 cut(s) 866
BsuRI GGCC 8 cut(s) 144, 239, 299, 389, 500, 572, 811, 1045
BtgI CCRYGG 2 cut(s) 300, 393
BtsCI GGATG 3 cut(s) 567, 823, 1066
BtsIMutI CAGTG 2 cut(s) 987, 1023
Cac8I GCNNGC 2 cut(s) 146, 1208
CaiI CAGNNNCTG 1 cut(s) 1072
CfoI GCGC 2 cut(s) 369, 437
Cfr10I RCCGGY 2 cut(s) 489, 689
Cfr13I GGNCC 8 cut(s) 28, 143, 172, 226, 237, 487, 492, 649
Cfr42I CCGCGG 1 cut(s) 396
CpoI CGGWCCG 1 cut(s) 649
CseI GACGC 2 cut(s) 428, 1209
Csp6I GTAC 5 cut(s) 310, 755, 799, 889, 1146
CspAI ACCGGT 1 cut(s) 489
CspI CGGWCCG 1 cut(s) 649
CviAII CATG 2 cut(s) 301, 1207
CviQI GTAC 5 cut(s) 310, 755, 799, 889, 1146
DpnI GATC 3 cut(s) 587, 908, 1065
DpnII GATC 3 cut(s) 585, 906, 1063
DriI GACNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 2 cut(s) 387, 809
Eam1104I CTCTTC 2 cut(s) 261, 531
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 2 cut(s) 261, 531
Ecl136II GAGCTC 1 cut(s) 598
Eco130I CCWWGG 3 cut(s) 294, 300, 495
Eco147I AGGCCT 1 cut(s) 500
Eco24I GRGCYC 1 cut(s) 600
Eco31I GGTCTC 1 cut(s) 350
Eco32I GATATC 1 cut(s) 735
Eco47I GGWCC 6 cut(s) 28, 172, 226, 487, 492, 649
Eco53kI GAGCTC 1 cut(s) 598
Eco57I CTGAAG 1 cut(s) 197
Eco91I GGTNACC 1 cut(s) 461
EcoICRI GAGCTC 1 cut(s) 598
EcoO109I RGGNCCY 2 cut(s) 172, 226
EcoO65I GGTNACC 1 cut(s) 461
EcoRI GAATTC 1 cut(s) 542
EcoRII CCWGG 2 cut(s) 500, 1045
EcoRV GATATC 1 cut(s) 735
EcoT14I CCWWGG 3 cut(s) 294, 300, 495
EcoT38I GRGCYC 1 cut(s) 600
ErhI CCWWGG 3 cut(s) 294, 300, 495
FaeI CATG 2 cut(s) 304, 1210
FalI AAGNNNNNCTT 2 cut(s) 539, 571
FaqI GGGAC 1 cut(s) 521
FatI CATG 2 cut(s) 300, 1206
FauI CCCGC 4 cut(s) 153, 446, 705, 1093
FbaI TGATCA 1 cut(s) 1063
FblI GTMKAC 1 cut(s) 865
Fnu4HI GCNGC 9 cut(s) 203, 212, 387, 396, 405, 408, 411, 933, 1204
FokI GGATG 3 cut(s) 574, 830, 1073
FriOI GRGCYC 1 cut(s) 600
Fsp4HI GCNGC 9 cut(s) 203, 212, 387, 396, 405, 408, 411, 933, 1204
FspBI CTAG 2 cut(s) 752, 975
GlaI GCGC 2 cut(s) 368, 436
GluI GCNGC 9 cut(s) 203, 212, 387, 396, 405, 408, 411, 933, 1204
GsuI CTGGAG 2 cut(s) 227, 1094
HaeIII GGCC 8 cut(s) 144, 239, 299, 389, 500, 572, 811, 1045
HgaI GACGC 2 cut(s) 428, 1209
HhaI GCGC 2 cut(s) 369, 437
Hin1I GRCGYC 2 cut(s) 342, 420
Hin1II CATG 2 cut(s) 304, 1210
Hin6I GCGC 2 cut(s) 367, 435
HinP1I GCGC 2 cut(s) 367, 435
HincII GTYRAC 1 cut(s) 418
HindII GTYRAC 1 cut(s) 418
HinfI GANTC 6 cut(s) 350, 660, 851, 1006, 1188, 1233
HphI GGTGA 4 cut(s) 181, 455, 847, 1015
Hpy166II GTNNAC 4 cut(s) 418, 866, 891, 1023
Hpy188I TCNGA 9 cut(s) 319, 340, 355, 427, 906, 918, 1011, 1095, 1238
Hpy188III TCNNGA 5 cut(s) 378, 547, 559, 634, 1073
Hpy8I GTNNAC 4 cut(s) 418, 866, 891, 1023
Hpy99I CGWCG 7 cut(s) 123, 137, 140, 143, 289, 347, 596
HpyAV CCTTC 8 cut(s) 73, 163, 172, 214, 562, 565, 826, 832
HpyCH4III ACNGT 3 cut(s) 361, 784, 991
HpyCH4IV ACGT 2 cut(s) 342, 575
HpyCH4V TGCA 4 cut(s) 325, 641, 994, 1090
HpyF10VI GCNNNNNNNGC 9 cut(s) 154, 208, 211, 392, 395, 401, 404, 410, 419
HpySE526I ACGT 2 cut(s) 342, 575
Hsp92I GRCGYC 2 cut(s) 342, 420
Hsp92II CATG 2 cut(s) 304, 1210
HspAI GCGC 2 cut(s) 367, 435
Kpn2I TCCGGA 2 cut(s) 558, 633
KpnI GGTACC 1 cut(s) 1149
Ksp22I TGATCA 1 cut(s) 1063
KspI CCGCGG 1 cut(s) 396
Kzo9I GATC 3 cut(s) 585, 906, 1063
LmnI GCTCC 3 cut(s) 208, 705, 919
Lsp1109I GCAGC 4 cut(s) 189, 223, 944, 1215
LweI GCATC 4 cut(s) 192, 780, 1099, 1242
MaeI CTAG 2 cut(s) 752, 975
MaeII ACGT 2 cut(s) 342, 575
MaeIII GTNAC 2 cut(s) 461, 515
MalI GATC 3 cut(s) 587, 908, 1065
MbiI CCGCTC 1 cut(s) 700
MboI GATC 3 cut(s) 585, 906, 1063
MboII GAAGA 6 cut(s) 278, 301, 548, 931, 982, 1233
MhlI GDGCHC 1 cut(s) 600
MluCI AATT 5 cut(s) 5, 542, 601, 642, 805
MlyI GAGTC 3 cut(s) 359, 669, 860
MroI TCCGGA 2 cut(s) 558, 633
MroXI GAANNNNTTC 1 cut(s) 554
MseI TTAA 2 cut(s) 942, 1116
MslI CAYNNNNRTG 2 cut(s) 989, 1028
MspA1I CMGCKG 2 cut(s) 395, 469
MspR9I CCNGG 7 cut(s) 26, 150, 236, 444, 502, 533, 1047
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 2 cut(s) 502, 1047
MvnI CGCG 3 cut(s) 386, 395, 437
MwoI GCNNNNNNNGC 9 cut(s) 154, 208, 211, 392, 395, 401, 404, 410, 419
NciI CCSGG 5 cut(s) 26, 150, 236, 444, 533
NcoI CCATGG 1 cut(s) 300
NdeII GATC 3 cut(s) 585, 906, 1063
NlaIII CATG 2 cut(s) 304, 1210
NlaIV GGNNCC 4 cut(s) 30, 965, 1147, 1172
NmeAIII GCCGAG 1 cut(s) 749
NmuCI GTSAC 1 cut(s) 461
NspI RCATGY 1 cut(s) 1210
NspV TTCGAA 1 cut(s) 713
OliI CACNNNNGTG 1 cut(s) 1028
PaeI GCATGC 1 cut(s) 1210
PceI AGGCCT 1 cut(s) 500
PcsI WCGNNNNNNNCGW 4 cut(s) 351, 611, 1207, 1252
PctI GAATGC 1 cut(s) 643
PdmI GAANNNNTTC 1 cut(s) 554
PfeI GAWTC 3 cut(s) 1006, 1188, 1233
PflMI CCANNNNNTGG 1 cut(s) 501
PfoI TCCNGGA 1 cut(s) 531
PinAI ACCGGT 1 cut(s) 489
PkrI GCNGC 9 cut(s) 204, 213, 388, 397, 406, 409, 412, 934, 1205
PleI GAGTC 3 cut(s) 358, 668, 859
PpsI GAGTC 3 cut(s) 358, 668, 859
PpuMI RGGWCCY 2 cut(s) 172, 226
Psp124BI GAGCTC 1 cut(s) 600
Psp5II RGGWCCY 2 cut(s) 172, 226
Psp6I CCWGG 2 cut(s) 500, 1045
PspEI GGTNACC 1 cut(s) 461
PspGI CCWGG 2 cut(s) 500, 1045
PspN4I GGNNCC 4 cut(s) 30, 965, 1147, 1172
PspPI GGNCC 8 cut(s) 28, 143, 172, 226, 237, 487, 492, 649
PspPPI RGGWCCY 2 cut(s) 172, 226
PstNI CAGNNNCTG 1 cut(s) 1072
RsaI GTAC 5 cut(s) 311, 756, 800, 890, 1147
RsaNI GTAC 5 cut(s) 310, 755, 799, 889, 1146
RseI CAYNNNNRTG 2 cut(s) 989, 1028
Rsr2I CGGWCCG 1 cut(s) 649
RsrII CGGWCCG 1 cut(s) 649
SacI GAGCTC 1 cut(s) 600
SacII CCGCGG 1 cut(s) 396
SaqAI TTAA 2 cut(s) 942, 1116
SatI GCNGC 9 cut(s) 203, 212, 387, 396, 405, 408, 411, 933, 1204
Sau3AI GATC 3 cut(s) 585, 906, 1063
Sau96I GGNCC 8 cut(s) 28, 143, 172, 226, 237, 487, 492, 649
ScaI AGTACT 3 cut(s) 311, 756, 800
SchI GAGTC 3 cut(s) 359, 669, 860
ScrFI CCNGG 7 cut(s) 26, 150, 236, 444, 502, 533, 1047
SduI GDGCHC 1 cut(s) 600
SfaNI GCATC 4 cut(s) 192, 780, 1099, 1242
SfcI CTRYAG 1 cut(s) 609
Sfr303I CCGCGG 1 cut(s) 396
SfuI TTCGAA 1 cut(s) 713
SgrBI CCGCGG 1 cut(s) 396
SinI GGWCC 6 cut(s) 28, 172, 226, 487, 492, 649
SmiMI CAYNNNNRTG 2 cut(s) 989, 1028
SphI GCATGC 1 cut(s) 1210
Sse9I AATT 5 cut(s) 5, 542, 601, 642, 805
SseBI AGGCCT 1 cut(s) 500
SspMI CTAG 2 cut(s) 752, 975
SstI GAGCTC 1 cut(s) 600
StuI AGGCCT 1 cut(s) 500
StyD4I CCNGG 7 cut(s) 24, 148, 234, 442, 500, 531, 1045
StyI CCWWGG 3 cut(s) 294, 300, 495
TaaI ACNGT 3 cut(s) 361, 784, 991
TaiI ACGT 2 cut(s) 345, 578
TaqI TCGA 8 cut(s) 231, 345, 377, 579, 713, 737, 849, 1246
TasI AATT 5 cut(s) 5, 542, 601, 642, 805
TatI WGTACW 4 cut(s) 309, 754, 798, 888
TauI GCSGC 5 cut(s) 389, 398, 407, 410, 413
TfiI GAWTC 3 cut(s) 1006, 1188, 1233
Tru1I TTAA 2 cut(s) 942, 1116
Tru9I TTAA 2 cut(s) 942, 1116
TscAI CASTG 2 cut(s) 994, 1030
TseFI GTSAC 1 cut(s) 461
TseI GCWGC 4 cut(s) 202, 211, 932, 1203
Tsp45I GTSAC 1 cut(s) 461
TspDTI ATGAA 3 cut(s) 17, 107, 182
TspRI CASTG 2 cut(s) 994, 1030
Van91I CCANNNNNTGG 1 cut(s) 501
VpaK11BI GGWCC 6 cut(s) 28, 172, 226, 487, 492, 649
XapI RAATTY 1 cut(s) 542
XceI RCATGY 1 cut(s) 1210
XcmI CCANNNNNNNNNTGG 1 cut(s) 301
XmiI GTMKAC 1 cut(s) 865
XmnI GAANNNNTTC 1 cut(s) 554
XspI CTAG 2 cut(s) 752, 975
ZraI GACGTC 1 cut(s) 343
ZrmI AGTACT 3 cut(s) 311, 756, 800
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.