Rh6BG512900
ERF Family

DDE superfamily endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0015028
Physical Location & Seq
Forward (+)
70826232 .. 70827452
1221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG512900.1

Sequence Viewer

Length: 1221 bp
ATGGTGGAGTACTACTCCGATTTGCAGGGCTACTACTCGGACGTCGAGGAGTCCGAGACCGTGAAGCGCAAGAAGTCGAGAAACGCGGCGACCGCTGCCGTTGCTGCGGCGGCGGCCTCCGAAAATGGCGCGAAACCCGGAGGAAGCGGGTCGGGTCACCAGCGGAGGCTTTGGGTCAAGGACCGGTCCAAGGCCTGGTGGGACGAGTGTAACCAACCCGATTTCCCGGAAGAGGACTTCAAAAAAGCCTTCCGGATGGGGAAGGCCACGTTCGATTTGATCTGCGATGAGCTCAATTCGGCTATAGCGAAAGAGGACACCACTCTCCGGAATGCAATTCCGGTCCGGCAGAGAGTCGCCGTCTGTTTGTGGAGGTTAGCTACCGGCGACCCGCTCCGGCTCGTTTCGAAGCGATTCGGGTTAGGGATATCGACTTGTCATAAGCTAGTACTGGAAGTCTGCTCAGCGATTAGGACTGTGTTGATGCCCAAGTACTTGAATTGGCCGGAGGATGGTGTTTTGAGGAAGGTGAAGGACGAGTTCGAATCGTTTTCGGGTATACCTAATGTTGTAGGGTCTATGTACACCACTCATATTCCGATCATAGCTCCGAAGATTAGTGTGGCAGCTTATTTTAACAAGAGGCATACAGAGAGGAACCAGAAGACTAGCTACTCCATCACTGTGCAAGGTGTGGTGAATCCGAAAGGGGTGTTCACTGATGTGTGTATAGGGTGGCCTGGTTCAATGCCGGATGATCAGGTTCTGGAGAAGTCGGCTTTGCATCAGAGGGCCGGGAATGGTTTGCTTAAAGGTGTGTGGATTGTGGGGGGTTCGGGGTACCCTTTGCTGGACTGGGTGCTGGTGCCGTATACCCAGCACCATCTTACTTGGACGCAGCATGCGTTCAATGAGAAGATTGGGGAGATTCAGAATGTGTCGAAAGATGCGTTTGCGAGGTTGAAAGGGAGGTGGTTGTGCTTGCAGAAGAGGACGGAGGTGAAGCTCCAGGACTTGCCTGTGGTTCTTGGGGCTTGCTGTGTGCTGCACAACATATGCGAGCTGAGGAATGAGGAAATCGACCCCGAGCTGAGGTTTGAGCTTGTGGATGATGAGATGGTTCCGGAGGTTGCTTTGAGATCACAAAGCTCAATGAAGGCGAGGGATTCCATTGCTCATAATCTTTTGCATCATGGCCTTGCAGGCACTTCTTTTCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDE_Tnp_4

Protein Analysis

406

Amino Acids

45.44

Weight (kDa)

8.24

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8040 PF26138 77 - 157 7.5e-06 Domain of unknown function (DUF8040)
DDE_Tnp_4 PF13359 195 - 351 1.3e-34 DDE superfamily endonuclease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015028)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12010
fragaria_vesca FvH4_2g31471
malus_domestica MD15G1055200.v1.1
prunus_persica Prupe.1G408400_v2.0.a1
pyrus_communis pycom08g05470 pycom15g05210
rosa_chinensis RchiOBHm_Chr6g0311321
rosa_laevigata RLG00000010417
rosa_multiflora Rmu_co8316609.1_g000001
rosa_roxburghii Rroxscaffold_7G00157760
rosa_rugosa Rorug06G0387200
rosa_samantha Rh6AG502300 Rh6BG512900 Rh6CG518600 Rh6DG504900
rosa_wichuraiana Rw6G043730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 45
Acc65I GGTACC 1 cut(s) 840
AccB1I GGYRCC 2 cut(s) 840, 865
AccB7I CCANNNNNTGG 1 cut(s) 195
AccBSI CCGCTC 1 cut(s) 394
AccI GTMKAC 2 cut(s) 559, 872
AccII CGCG 2 cut(s) 86, 131
AccIII TCCGGA 3 cut(s) 252, 327, 1123
AciI CCGC 8 cut(s) 86, 93, 107, 110, 113, 147, 163, 392
AcoI YGGCCR 1 cut(s) 503
AcyI GRCGYC 1 cut(s) 42
AfaI GTAC 5 cut(s) 11, 450, 494, 584, 842
AfiI CCNNNNNNNGG 7 cut(s) 190, 195, 232, 327, 512, 850, 1092
AgeI ACCGGT 1 cut(s) 183
AgsI TTSAA 5 cut(s) 241, 499, 747, 910, 964
AjnI CCWGG 3 cut(s) 194, 739, 1008
AleI CACNNNNGTG 1 cut(s) 722
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 1 cut(s) 50
AlwNI CAGNNNCTG 1 cut(s) 766
Ama87I CYCGRG 1 cut(s) 1085
Aor13HI TCCGGA 3 cut(s) 252, 327, 1123
AoxI GGCC 7 cut(s) 114, 192, 264, 503, 737, 792, 1195
ApeKI GCWGC 5 cut(s) 95, 104, 626, 898, 1045
AsiGI ACCGGT 1 cut(s) 183
Asp700I GAANNNNTTC 1 cut(s) 413
Asp718I GGTACC 1 cut(s) 840
AspLEI GCGC 2 cut(s) 69, 131
AspS9I GGNCC 4 cut(s) 181, 186, 343, 792
AsuC2I CCSGG 3 cut(s) 138, 227, 796
AsuHPI GGTGA 4 cut(s) 149, 541, 709, 1012
AsuII TTCGAA 2 cut(s) 407, 543
AvaI CYCGRG 1 cut(s) 1085
AvaII GGWCC 3 cut(s) 181, 186, 343
BanI GGYRCC 2 cut(s) 840, 865
BanII GRGCYC 1 cut(s) 294
BarI GAAGNNNNNNTAC 2 cut(s) 656, 688
BbsI GAAGAC 1 cut(s) 671
Bbv12I GWGCWC 1 cut(s) 294
BbvCI CCTCAGC 2 cut(s) 1064, 1091
BbvI GCAGC 5 cut(s) 82, 91, 638, 910, 1032
BccI CCATC 5 cut(s) 250, 506, 686, 891, 1111
BceAI ACGGC 3 cut(s) 83, 344, 853
BciT130I CCWGG 3 cut(s) 196, 741, 1010
BclI TGATCA 1 cut(s) 757
BcnI CCSGG 3 cut(s) 138, 227, 796
BcoDI GTCTC 1 cut(s) 50
BfaI CTAG 3 cut(s) 446, 669, 1219
BfmI CTRYAG 1 cut(s) 303
BglI GCCNNNNNGGC 1 cut(s) 1203
BisI GCNGC 9 cut(s) 87, 96, 105, 108, 111, 114, 627, 899, 1046
BlpI GCTNAGC 1 cut(s) 463
BlsI GCNGC 9 cut(s) 88, 97, 106, 109, 112, 115, 628, 900, 1047
BmcAI AGTACT 3 cut(s) 11, 450, 494
Bme1390I CCNGG 6 cut(s) 138, 196, 227, 741, 796, 1010
Bme18I GGWCC 3 cut(s) 181, 186, 343
BmeT110I CYCGRG 1 cut(s) 1085
BmgT120I GGNCC 4 cut(s) 181, 186, 343, 792
BmiI GGNNCC 4 cut(s) 659, 842, 867, 1122
BmrFI CCNGG 6 cut(s) 138, 196, 227, 741, 796, 1010
BmrI ACTGGG 1 cut(s) 865
BmsI GCATC 4 cut(s) 474, 793, 937, 1198
BmuI ACTGGG 1 cut(s) 865
BpiI GAAGAC 1 cut(s) 671
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 2 cut(s) 788, 992
Bpu10I CCTNAGC 2 cut(s) 1064, 1091
Bpu1102I GCTNAGC 1 cut(s) 463
Bpu14I TTCGAA 2 cut(s) 407, 543
BpuMI CCSGG 3 cut(s) 138, 227, 796
BsaHI GRCGYC 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 50
BsaJI CCNNGG 1 cut(s) 189
BsaWI WCCGGW 5 cut(s) 183, 252, 327, 340, 1123
Bsc4I CCNNNNNNNGG 7 cut(s) 190, 195, 232, 327, 512, 850, 1092
Bse118I RCCGGY 2 cut(s) 183, 383
Bse1I ACTGG 2 cut(s) 456, 860
Bse3DI GCAATG 1 cut(s) 1170
BseAI TCCGGA 3 cut(s) 252, 327, 1123
BseBI CCWGG 3 cut(s) 196, 741, 1010
BseDI CCNNGG 1 cut(s) 189
BseGI GGATG 4 cut(s) 261, 517, 760, 1114
BseLI CCNNNNNNNGG 7 cut(s) 190, 195, 232, 327, 512, 850, 1092
BseMI GCAATG 1 cut(s) 1170
BseMII CTCAG 3 cut(s) 477, 1055, 1082
BseNI ACTGG 2 cut(s) 456, 860
BseRI GAGGAG 1 cut(s) 62
BseXI GCAGC 5 cut(s) 82, 91, 638, 910, 1032
BseYI CCCAGC 1 cut(s) 876
BsgI GTGCAG 1 cut(s) 1031
Bsh1236I CGCG 2 cut(s) 86, 131
Bsh1285I CGRYCG 1 cut(s) 93
BshFI GGCC 7 cut(s) 116, 194, 266, 505, 739, 794, 1197
BshNI GGYRCC 2 cut(s) 840, 865
BshTI ACCGGT 1 cut(s) 183
BsiEI CGRYCG 1 cut(s) 93
BsiHKAI GWGCWC 1 cut(s) 294
BsiHKCI CYCGRG 1 cut(s) 1085
BslFI GGGAC 1 cut(s) 215
BslI CCNNNNNNNGG 7 cut(s) 190, 195, 232, 327, 512, 850, 1092
BsmAI GTCTC 1 cut(s) 50
BsmFI GGGAC 1 cut(s) 215
BsmI GAATGC 1 cut(s) 337
BsnI GGCC 7 cut(s) 116, 194, 266, 505, 739, 794, 1197
Bso31I GGTCTC 1 cut(s) 50
BsoBI CYCGRG 1 cut(s) 1085
Bsp119I TTCGAA 2 cut(s) 407, 543
Bsp1286I GDGCHC 1 cut(s) 294
Bsp13I TCCGGA 3 cut(s) 252, 327, 1123
Bsp1407I TGTACA 1 cut(s) 582
Bsp143I GATC 4 cut(s) 279, 600, 757, 1139
Bsp1720I GCTNAGC 1 cut(s) 463
BspACI CCGC 8 cut(s) 86, 93, 107, 110, 113, 147, 163, 392
BspANI GGCC 7 cut(s) 116, 194, 266, 505, 739, 794, 1197
BspCNI CTCAG 3 cut(s) 476, 1056, 1083
BspEI TCCGGA 3 cut(s) 252, 327, 1123
BspFNI CGCG 2 cut(s) 86, 131
BspLI GGNNCC 4 cut(s) 659, 842, 867, 1122
BspT104I TTCGAA 2 cut(s) 407, 543
BspT107I GGYRCC 2 cut(s) 840, 865
BspTNI GGTCTC 1 cut(s) 50
BsrBI CCGCTC 1 cut(s) 394
BsrDI GCAATG 1 cut(s) 1170
BsrFI RCCGGY 2 cut(s) 183, 383
BsrGI TGTACA 1 cut(s) 582
BsrI ACTGG 2 cut(s) 456, 860
BssAI RCCGGY 2 cut(s) 183, 383
BssECI CCNNGG 1 cut(s) 189
BssMI GATC 4 cut(s) 279, 600, 757, 1139
BssNAI GTATAC 2 cut(s) 560, 873
BssNI GRCGYC 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 189
Bst1107I GTATAC 2 cut(s) 560, 873
Bst2UI CCWGG 3 cut(s) 196, 741, 1010
Bst4CI ACNGT 3 cut(s) 61, 478, 685
Bst6I CTCTTC 2 cut(s) 225, 983
BstACI GRCGYC 1 cut(s) 42
BstAUI TGTACA 1 cut(s) 582
BstBI TTCGAA 2 cut(s) 407, 543
BstC8I GCNNGC 5 cut(s) 903, 983, 1036, 1061, 1204
BstDEI CTNAG 3 cut(s) 463, 1064, 1091
BstEII GGTNACC 1 cut(s) 155
BstF5I GGATG 4 cut(s) 261, 517, 760, 1114
BstFNI CGCG 2 cut(s) 86, 131
BstHHI GCGC 2 cut(s) 69, 131
BstKTI GATC 4 cut(s) 282, 603, 760, 1142
BstMAI GTCTC 1 cut(s) 50
BstMBI GATC 4 cut(s) 279, 600, 757, 1139
BstMCI CGRYCG 1 cut(s) 93
BstMWI GCNNNNNNNGC 7 cut(s) 92, 95, 101, 104, 110, 113, 1203
BstNI CCWGG 3 cut(s) 196, 741, 1010
BstNSI RCATGY 1 cut(s) 905
BstPI GGTNACC 1 cut(s) 155
BstSCI CCNGG 6 cut(s) 136, 194, 225, 739, 794, 1008
BstSFI CTRYAG 1 cut(s) 303
BstUI CGCG 2 cut(s) 86, 131
BstV1I GCAGC 5 cut(s) 82, 91, 638, 910, 1032
BstV2I GAAGAC 1 cut(s) 671
BstZ17I GTATAC 2 cut(s) 560, 873
BsuRI GGCC 7 cut(s) 116, 194, 266, 505, 739, 794, 1197
BtgZI GCGATG 1 cut(s) 300
BtsCI GGATG 4 cut(s) 261, 517, 760, 1114
BtsIMutI CAGTG 2 cut(s) 681, 717
Cac8I GCNNGC 5 cut(s) 903, 983, 1036, 1061, 1204
CaiI CAGNNNCTG 1 cut(s) 766
CfoI GCGC 2 cut(s) 69, 131
Cfr10I RCCGGY 2 cut(s) 183, 383
Cfr13I GGNCC 4 cut(s) 181, 186, 343, 792
CpoI CGGWCCG 1 cut(s) 343
CseI GACGC 1 cut(s) 904
Csp6I GTAC 5 cut(s) 10, 449, 493, 583, 841
CspAI ACCGGT 1 cut(s) 183
CspI CGGWCCG 1 cut(s) 343
CviAII CATG 2 cut(s) 902, 1193
CviQI GTAC 5 cut(s) 10, 449, 493, 583, 841
DdeI CTNAG 3 cut(s) 463, 1064, 1091
DpnI GATC 4 cut(s) 281, 602, 759, 1141
DpnII GATC 4 cut(s) 279, 600, 757, 1139
EaeI YGGCCR 1 cut(s) 503
Eam1104I CTCTTC 2 cut(s) 225, 983
EarI CTCTTC 2 cut(s) 225, 983
Ecl136II GAGCTC 1 cut(s) 292
Eco130I CCWWGG 1 cut(s) 189
Eco147I AGGCCT 1 cut(s) 194
Eco24I GRGCYC 1 cut(s) 294
Eco31I GGTCTC 1 cut(s) 50
Eco32I GATATC 1 cut(s) 429
Eco47I GGWCC 3 cut(s) 181, 186, 343
Eco53kI GAGCTC 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 1085
Eco91I GGTNACC 1 cut(s) 155
EcoICRI GAGCTC 1 cut(s) 292
EcoO65I GGTNACC 1 cut(s) 155
EcoRII CCWGG 3 cut(s) 194, 739, 1008
EcoRV GATATC 1 cut(s) 429
EcoT14I CCWWGG 1 cut(s) 189
EcoT38I GRGCYC 1 cut(s) 294
ErhI CCWWGG 1 cut(s) 189
FaeI CATG 2 cut(s) 905, 1196
FaqI GGGAC 1 cut(s) 215
FatI CATG 2 cut(s) 901, 1192
FauI CCCGC 2 cut(s) 140, 399
FauNDI CATATG 1 cut(s) 1055
FbaI TGATCA 1 cut(s) 757
FblI GTMKAC 2 cut(s) 559, 872
Fnu4HI GCNGC 9 cut(s) 87, 96, 105, 108, 111, 114, 627, 899, 1046
FokI GGATG 4 cut(s) 268, 524, 767, 1121
FriOI GRGCYC 1 cut(s) 294
Fsp4HI GCNGC 9 cut(s) 87, 96, 105, 108, 111, 114, 627, 899, 1046
FspBI CTAG 3 cut(s) 446, 669, 1219
GlaI GCGC 2 cut(s) 68, 130
GluI GCNGC 9 cut(s) 87, 96, 105, 108, 111, 114, 627, 899, 1046
GsaI CCCAGC 1 cut(s) 880
GsuI CTGGAG 2 cut(s) 788, 992
HaeIII GGCC 7 cut(s) 116, 194, 266, 505, 739, 794, 1197
HgaI GACGC 1 cut(s) 904
HhaI GCGC 2 cut(s) 69, 131
Hin1I GRCGYC 1 cut(s) 42
Hin1II CATG 2 cut(s) 905, 1196
Hin6I GCGC 2 cut(s) 67, 129
HinP1I GCGC 2 cut(s) 67, 129
HinfI GANTC 7 cut(s) 50, 354, 414, 545, 700, 928, 1166
HphI GGTGA 4 cut(s) 149, 541, 709, 1012
Hpy166II GTNNAC 4 cut(s) 560, 585, 717, 873
Hpy188I TCNGA 9 cut(s) 19, 40, 55, 121, 600, 612, 705, 789, 933
Hpy188III TCNNGA 5 cut(s) 78, 253, 328, 767, 1124
Hpy8I GTNNAC 4 cut(s) 560, 585, 717, 873
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 5 cut(s) 256, 259, 520, 526, 1150
HpyCH4III ACNGT 3 cut(s) 61, 478, 685
HpyCH4IV ACGT 2 cut(s) 42, 269
HpyCH4V TGCA 8 cut(s) 25, 335, 688, 784, 985, 1048, 1189, 1202
HpyF10VI GCNNNNNNNGC 7 cut(s) 92, 95, 101, 104, 110, 113, 1203
HpyF3I CTNAG 3 cut(s) 463, 1064, 1091
HpySE526I ACGT 2 cut(s) 42, 269
Hsp92I GRCGYC 1 cut(s) 42
Hsp92II CATG 2 cut(s) 905, 1196
HspAI GCGC 2 cut(s) 67, 129
Kpn2I TCCGGA 3 cut(s) 252, 327, 1123
KpnI GGTACC 1 cut(s) 844
Ksp22I TGATCA 1 cut(s) 757
Kzo9I GATC 4 cut(s) 279, 600, 757, 1139
LmnI GCTCC 3 cut(s) 399, 613, 1011
Lsp1109I GCAGC 5 cut(s) 82, 91, 638, 910, 1032
LweI GCATC 4 cut(s) 474, 793, 937, 1198
MaeI CTAG 3 cut(s) 446, 669, 1219
MaeII ACGT 2 cut(s) 42, 269
MaeIII GTNAC 2 cut(s) 155, 209
MalI GATC 4 cut(s) 281, 602, 759, 1141
MbiI CCGCTC 1 cut(s) 394
MboI GATC 4 cut(s) 279, 600, 757, 1139
MboII GAAGA 5 cut(s) 242, 625, 676, 928, 1000
MhlI GDGCHC 1 cut(s) 294
MluCI AATT 3 cut(s) 295, 336, 499
MlyI GAGTC 2 cut(s) 59, 363
MroI TCCGGA 3 cut(s) 252, 327, 1123
MroXI GAANNNNTTC 1 cut(s) 413
MseI TTAA 2 cut(s) 636, 810
MslI CAYNNNNRTG 2 cut(s) 683, 722
MspA1I CMGCKG 2 cut(s) 95, 163
MspR9I CCNGG 6 cut(s) 138, 196, 227, 741, 796, 1010
Mva1269I GAATGC 1 cut(s) 337
MvaI CCWGG 3 cut(s) 196, 741, 1010
MvnI CGCG 2 cut(s) 86, 131
MwoI GCNNNNNNNGC 7 cut(s) 92, 95, 101, 104, 110, 113, 1203
NciI CCSGG 3 cut(s) 138, 227, 796
NdeI CATATG 1 cut(s) 1055
NdeII GATC 4 cut(s) 279, 600, 757, 1139
NlaIII CATG 2 cut(s) 905, 1196
NlaIV GGNNCC 4 cut(s) 659, 842, 867, 1122
NmuCI GTSAC 1 cut(s) 155
NspI RCATGY 1 cut(s) 905
NspV TTCGAA 2 cut(s) 407, 543
OliI CACNNNNGTG 1 cut(s) 722
PaeI GCATGC 1 cut(s) 905
PceI AGGCCT 1 cut(s) 194
PcsI WCGNNNNNNNCGW 4 cut(s) 51, 305, 902, 947
PctI GAATGC 1 cut(s) 337
PdmI GAANNNNTTC 1 cut(s) 413
PfeI GAWTC 5 cut(s) 414, 545, 700, 928, 1166
PflMI CCANNNNNTGG 1 cut(s) 195
PfoI TCCNGGA 2 cut(s) 225, 1008
PinAI ACCGGT 1 cut(s) 183
PkrI GCNGC 9 cut(s) 88, 97, 106, 109, 112, 115, 628, 900, 1047
PleI GAGTC 2 cut(s) 58, 362
PpsI GAGTC 2 cut(s) 58, 362
Psp124BI GAGCTC 1 cut(s) 294
Psp6I CCWGG 3 cut(s) 194, 739, 1008
PspEI GGTNACC 1 cut(s) 155
PspFI CCCAGC 1 cut(s) 876
PspGI CCWGG 3 cut(s) 194, 739, 1008
PspN4I GGNNCC 4 cut(s) 659, 842, 867, 1122
PspPI GGNCC 4 cut(s) 181, 186, 343, 792
PstNI CAGNNNCTG 1 cut(s) 766
RsaI GTAC 5 cut(s) 11, 450, 494, 584, 842
RsaNI GTAC 5 cut(s) 10, 449, 493, 583, 841
RseI CAYNNNNRTG 2 cut(s) 683, 722
Rsr2I CGGWCCG 1 cut(s) 343
RsrII CGGWCCG 1 cut(s) 343
SacI GAGCTC 1 cut(s) 294
SaqAI TTAA 2 cut(s) 636, 810
SatI GCNGC 9 cut(s) 87, 96, 105, 108, 111, 114, 627, 899, 1046
Sau3AI GATC 4 cut(s) 279, 600, 757, 1139
Sau96I GGNCC 4 cut(s) 181, 186, 343, 792
ScaI AGTACT 3 cut(s) 11, 450, 494
SchI GAGTC 2 cut(s) 59, 363
ScrFI CCNGG 6 cut(s) 138, 196, 227, 741, 796, 1010
SduI GDGCHC 1 cut(s) 294
SfaNI GCATC 4 cut(s) 474, 793, 937, 1198
SfcI CTRYAG 1 cut(s) 303
SfuI TTCGAA 2 cut(s) 407, 543
SinI GGWCC 3 cut(s) 181, 186, 343
SmiMI CAYNNNNRTG 2 cut(s) 683, 722
SphI GCATGC 1 cut(s) 905
Sse9I AATT 3 cut(s) 295, 336, 499
SseBI AGGCCT 1 cut(s) 194
SsiI CCGC 8 cut(s) 86, 93, 107, 110, 113, 147, 163, 392
SspMI CTAG 3 cut(s) 446, 669, 1219
SstI GAGCTC 1 cut(s) 294
StuI AGGCCT 1 cut(s) 194
StyD4I CCNGG 6 cut(s) 136, 194, 225, 739, 794, 1008
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 3 cut(s) 61, 478, 685
TaiI ACGT 2 cut(s) 45, 272
TaqI TCGA 8 cut(s) 45, 77, 273, 407, 431, 543, 941, 1080
TasI AATT 3 cut(s) 295, 336, 499
TatI WGTACW 4 cut(s) 9, 448, 492, 582
TauI GCSGC 4 cut(s) 89, 110, 113, 116
TfiI GAWTC 5 cut(s) 414, 545, 700, 928, 1166
Tru1I TTAA 2 cut(s) 636, 810
Tru9I TTAA 2 cut(s) 636, 810
TscAI CASTG 2 cut(s) 688, 724
TseFI GTSAC 1 cut(s) 155
TseI GCWGC 5 cut(s) 95, 104, 626, 898, 1045
Tsp45I GTSAC 1 cut(s) 155
TspDTI ATGAA 1 cut(s) 1169
TspGWI ACGGA 1 cut(s) 1010
TspRI CASTG 2 cut(s) 688, 724
Van91I CCANNNNNTGG 1 cut(s) 195
VpaK11BI GGWCC 3 cut(s) 181, 186, 343
XceI RCATGY 1 cut(s) 905
XmiI GTMKAC 2 cut(s) 559, 872
XmnI GAANNNNTTC 1 cut(s) 413
XspI CTAG 3 cut(s) 446, 669, 1219
ZraI GACGTC 1 cut(s) 43
ZrmI AGTACT 3 cut(s) 11, 450, 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.