Prupe.1G418500_v2.0.a1

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
36270141 .. 36274150
4010 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G418500.2

Sequence Viewer

Length: 1302 bp
ATGGGTGGTCATGACAGTGAGGATGGGGGGTTTCAACATAGAAATGAGGGAAGTCTGAATTGCCCATCTTCAGGGATGAGCACAAATCCACTGCCTGAAAAGGTTTCACAAATAACAATGAGCTCTGTATCCATGTTTAAGCCTTCAAATGGAGCTGACCCTTTTTTTGGTTCTGGTTGGGATCCAATTGTTTCATTGAGTCAGAGTGATAATTTTGGAGGTTCTTCAGTCGTTTCTCACAGAGAATTTTCCAATCCTCCTTACCCCGTTGCGTTGGAAAATCCGGGAATGAGTAGCACCTCTCACCTTGTTCAATATCCATCTGATTCAAGCTATGTCGAAATGGTGCCAAAGCTTCCATGTTTTGGAAGTGGGAGCTTCTCAGAAATGGTTGGTTCTTTTGGCCTATCTGAGTGTGCTCAGATTGCAAACCCTGGGTGTGCTGCGAACTATAACCCACACAGGGAGGGGGCCCCTGAGAGGACTTCAACAATTGGCGCCCAATCTCATGATGATCGCCAAATTTCGGAAGAGGGTGCTTTAGGATCTTCACCCAGTGGAAAGAGAAGGAAACGAGTTCCTGAATCCAATTCTGCATTCAGTCCAAATAAGAATGCTGAAGGGGAAATTAACAAGGATCTGTCTGGGGAGAGCTCTGATTATCTGAAAGAACAAGATGAGAAAAAAGCGAAAGTTGAAGACAACACAGCTGCAAATTTGCGCGGTAAGCAAATGGGCAAACAGGCTAAAGAAAGTTCTCAGAGCGGAGATGCGAAGGACAGTTACATTCATGTTAGAGCCAGAAGGGGTCAGGCTACAAATAGTCATAGCCTCGCCGAAAGGGTTAGAAGAGAAAAGATTAGTGAGCGGATGAGATTGCTTCAAGAACTTGTTCCAGGATGCAATAAGATTACTGGGAAGGCTGTAATGCTTGATGAGATCATCAACTATGTGCAATCTCTGCAACAGCAAGTTGAGTTTTTATCAATGAAACTCGCGACAGTCAATCCAGAACTCAACATCGATATAGAACGGATTCTATCCAAAGATATTCTTAACTCACGAAGTGGCAGTGGAGCTATCTTCGGGTTTAGTCCTGGAATCAGCTCTTCTCACCCATACCCTCATGGTATGTTCCCAGGAAACTTGCCAAGTATGCCAAGTTCAGCTCCACAATTTCCTTCCTTGCCTCAGACTGTGTTAGACAGTGAGCTCCAAGGTCTTTTCCATATGGGTTTTGATTCTAGTTCAGCTATTGACAATTTGGGACAAAATGCAGGCCGCTTGAAATCAGAGCTATAA

Protein Analysis

434

Amino Acids

46.64

Weight (kDa)

5.72

Isoelectric Point (pI)

62.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 346, 497
AccB7I CCANNNNNTGG 1 cut(s) 365
AccBSI CCGCTC 2 cut(s) 765, 868
AccII CGCG 2 cut(s) 723, 998
AciI CCGC 4 cut(s) 723, 765, 868, 1282
AclWI GGATC 4 cut(s) 176, 189, 553, 645
AcsI RAATTY 3 cut(s) 245, 522, 715
AcuI CTGAAG 3 cut(s) 54, 210, 639
AcyI GRCGYC 1 cut(s) 498
AdeI CACNNNGTG 2 cut(s) 557, 1067
AfiI CCNNNNNNNGG 7 cut(s) 71, 149, 167, 365, 463, 480, 526
AgsI TTSAA 8 cut(s) 35, 147, 314, 330, 489, 698, 884, 1288
AjnI CCWGG 4 cut(s) 433, 895, 1096, 1138
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
Alw21I GWGCWC 5 cut(s) 83, 125, 421, 656, 1215
AlwI GGATC 4 cut(s) 176, 189, 553, 645
AoxI GGCC 3 cut(s) 403, 471, 1279
ApaI GGGCCC 1 cut(s) 475
ApeKI GCWGC 2 cut(s) 443, 710
ApoI RAATTY 3 cut(s) 245, 522, 715
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
Asp700I GAANNNNTTC 2 cut(s) 891, 1035
AspLEI GCGC 2 cut(s) 500, 723
AspS9I GGNCC 2 cut(s) 471, 472
AsuC2I CCSGG 1 cut(s) 285
AsuHPI GGTGA 3 cut(s) 296, 543, 1106
BaeGI GKGCMC 1 cut(s) 475
BamHI GGATCC 1 cut(s) 181
BanI GGYRCC 2 cut(s) 346, 497
BanII GRGCYC 4 cut(s) 125, 475, 656, 1215
BarI GAAGNNNNNNTAC 2 cut(s) 767, 799
BbsI GAAGAC 1 cut(s) 705
Bbv12I GWGCWC 5 cut(s) 83, 125, 421, 656, 1215
BbvI GCAGC 2 cut(s) 430, 697
BccI CCATC 3 cut(s) 17, 73, 328
BciT130I CCWGG 4 cut(s) 435, 897, 1098, 1140
BciVI GTATCC 1 cut(s) 139
BcnI CCSGG 1 cut(s) 285
BfaI CTAG 1 cut(s) 1245
BfoI RGCGCY 1 cut(s) 501
BfuI GTATCC 1 cut(s) 139
BisI GCNGC 3 cut(s) 444, 711, 1282
BlsI GCNGC 3 cut(s) 445, 712, 1283
Bme1390I CCNGG 5 cut(s) 285, 435, 897, 1098, 1140
BmgT120I GGNCC 2 cut(s) 471, 472
BmiI GGNNCC 6 cut(s) 183, 348, 472, 473, 474, 499
BmrFI CCNGG 5 cut(s) 285, 435, 897, 1098, 1140
BmrI ACTGGG 2 cut(s) 549, 924
BmsI GCATC 2 cut(s) 760, 890
BmuI ACTGGG 2 cut(s) 549, 924
BpiI GAAGAC 1 cut(s) 705
BpuMI CCSGG 1 cut(s) 285
Bsa29I ATCGAT 1 cut(s) 1023
BsaHI GRCGYC 1 cut(s) 498
BsaJI CCNNGG 4 cut(s) 433, 434, 1138, 1216
Bsc4I CCNNNNNNNGG 7 cut(s) 71, 149, 167, 365, 463, 480, 526
Bse1I ACTGG 2 cut(s) 555, 919
BseBI CCWGG 4 cut(s) 435, 897, 1098, 1140
BseCI ATCGAT 1 cut(s) 1023
BseDI CCNNGG 4 cut(s) 433, 434, 1138, 1216
BseGI GGATG 4 cut(s) 28, 81, 876, 905
BseLI CCNNNNNNNGG 7 cut(s) 71, 149, 167, 365, 463, 480, 526
BseMII CTCAG 6 cut(s) 396, 402, 434, 468, 773, 1205
BseNI ACTGG 2 cut(s) 555, 919
BseSI GKGCMC 1 cut(s) 475
BseXI GCAGC 2 cut(s) 430, 697
Bsh1236I CGCG 2 cut(s) 723, 998
BshFI GGCC 3 cut(s) 405, 473, 1281
BshNI GGYRCC 2 cut(s) 346, 497
BshVI ATCGAT 1 cut(s) 1023
BsiHKAI GWGCWC 5 cut(s) 83, 125, 421, 656, 1215
BsiSI CCGG 1 cut(s) 284
BslFI GGGAC 1 cut(s) 1281
BslI CCNNNNNNNGG 7 cut(s) 71, 149, 167, 365, 463, 480, 526
BsmFI GGGAC 1 cut(s) 1281
BsmI GAATGC 2 cut(s) 596, 619
BsnI GGCC 3 cut(s) 405, 473, 1281
Bsp120I GGGCCC 1 cut(s) 471
Bsp1286I GDGCHC 6 cut(s) 83, 125, 421, 475, 656, 1215
Bsp143I GATC 5 cut(s) 181, 514, 545, 637, 939
Bsp68I TCGCGA 1 cut(s) 998
BspACI CCGC 4 cut(s) 723, 765, 868, 1282
BspANI GGCC 3 cut(s) 405, 473, 1281
BspCNI CTCAG 6 cut(s) 395, 403, 433, 469, 772, 1204
BspDI ATCGAT 1 cut(s) 1023
BspFNI CGCG 2 cut(s) 723, 998
BspHI TCATGA 2 cut(s) 10, 508
BspLI GGNNCC 6 cut(s) 183, 348, 472, 473, 474, 499
BspPI GGATC 4 cut(s) 176, 189, 553, 645
BspQI GCTCTTC 1 cut(s) 1114
BspT107I GGYRCC 2 cut(s) 346, 497
BsrBI CCGCTC 2 cut(s) 765, 868
BsrI ACTGG 2 cut(s) 555, 919
BssECI CCNNGG 4 cut(s) 433, 434, 1138, 1216
BssMI GATC 5 cut(s) 181, 514, 545, 637, 939
BssNI GRCGYC 1 cut(s) 498
BssT1I CCWWGG 1 cut(s) 1216
Bst2UI CCWGG 4 cut(s) 435, 897, 1098, 1140
Bst4CI ACNGT 5 cut(s) 17, 782, 1003, 1198, 1208
Bst6I CTCTTC 3 cut(s) 525, 844, 1114
BstACI GRCGYC 1 cut(s) 498
BstAPI GCANNNNNTGC 1 cut(s) 961
BstC8I GCNNGC 1 cut(s) 1279
BstDEI CTNAG 6 cut(s) 382, 411, 420, 477, 759, 1191
BstF5I GGATG 4 cut(s) 28, 81, 876, 905
BstFNI CGCG 2 cut(s) 723, 998
BstH2I RGCGCY 1 cut(s) 501
BstHHI GCGC 2 cut(s) 500, 723
BstKTI GATC 5 cut(s) 184, 517, 548, 640, 942
BstMBI GATC 5 cut(s) 181, 514, 545, 637, 939
BstMWI GCNNNNNNNGC 4 cut(s) 425, 727, 961, 1156
BstNI CCWGG 4 cut(s) 435, 897, 1098, 1140
BstSCI CCNGG 5 cut(s) 283, 433, 895, 1096, 1138
BstSLI GKGCMC 1 cut(s) 475
BstUI CGCG 2 cut(s) 723, 998
BstV1I GCAGC 2 cut(s) 430, 697
BstV2I GAAGAC 1 cut(s) 705
BstX2I RGATCY 3 cut(s) 181, 545, 637
BstYI RGATCY 3 cut(s) 181, 545, 637
Bsu15I ATCGAT 1 cut(s) 1023
BsuI GTATCC 1 cut(s) 139
BsuRI GGCC 3 cut(s) 405, 473, 1281
BsuTUI ATCGAT 1 cut(s) 1023
BtsCI GGATG 4 cut(s) 28, 81, 876, 905
BtsI GCAGTG 2 cut(s) 89, 1078
BtsIMutI CAGTG 5 cut(s) 22, 89, 562, 1078, 1213
BtuMI TCGCGA 1 cut(s) 998
Cac8I GCNNGC 1 cut(s) 1279
CciI TCATGA 2 cut(s) 10, 508
CfoI GCGC 2 cut(s) 500, 723
Cfr13I GGNCC 2 cut(s) 471, 472
ClaI ATCGAT 1 cut(s) 1023
CviAII CATG 6 cut(s) 11, 133, 360, 509, 791, 1127
DdeI CTNAG 6 cut(s) 382, 411, 420, 477, 759, 1191
DinI GGCGCC 1 cut(s) 499
DpnI GATC 5 cut(s) 183, 516, 547, 639, 941
DpnII GATC 5 cut(s) 181, 514, 545, 637, 939
DraIII CACNNNGTG 2 cut(s) 557, 1067
Eam1104I CTCTTC 3 cut(s) 525, 844, 1114
EarI CTCTTC 3 cut(s) 525, 844, 1114
Ecl136II GAGCTC 3 cut(s) 123, 654, 1213
Eco130I CCWWGG 1 cut(s) 1216
Eco24I GRGCYC 4 cut(s) 125, 475, 656, 1215
Eco53kI GAGCTC 3 cut(s) 123, 654, 1213
Eco57I CTGAAG 3 cut(s) 54, 210, 639
EcoICRI GAGCTC 3 cut(s) 123, 654, 1213
EcoO109I RGGNCCY 2 cut(s) 471, 472
EcoRII CCWGG 4 cut(s) 433, 895, 1096, 1138
EcoT14I CCWWGG 1 cut(s) 1216
EcoT38I GRGCYC 4 cut(s) 125, 475, 656, 1215
EgeI GGCGCC 1 cut(s) 499
EheI GGCGCC 1 cut(s) 499
ErhI CCWWGG 1 cut(s) 1216
FaeI CATG 6 cut(s) 14, 136, 363, 512, 794, 1130
FalI AAGNNNNNCTT 2 cut(s) 1038, 1070
FaqI GGGAC 1 cut(s) 1281
FatI CATG 6 cut(s) 10, 132, 359, 508, 790, 1126
FauNDI CATATG 1 cut(s) 1230
Fnu4HI GCNGC 3 cut(s) 444, 711, 1282
FokI GGATG 4 cut(s) 35, 88, 883, 912
FriOI GRGCYC 4 cut(s) 125, 475, 656, 1215
Fsp4HI GCNGC 3 cut(s) 444, 711, 1282
FspBI CTAG 1 cut(s) 1245
GlaI GCGC 2 cut(s) 499, 722
GluI GCNGC 3 cut(s) 444, 711, 1282
HaeII RGCGCY 1 cut(s) 501
HaeIII GGCC 3 cut(s) 405, 473, 1281
HapII CCGG 1 cut(s) 284
HhaI GCGC 2 cut(s) 500, 723
Hin1I GRCGYC 1 cut(s) 498
Hin1II CATG 6 cut(s) 14, 136, 363, 512, 794, 1130
Hin6I GCGC 2 cut(s) 498, 721
HinP1I GCGC 2 cut(s) 498, 721
HindIII AAGCTT 1 cut(s) 353
HinfI GANTC 6 cut(s) 199, 326, 584, 1036, 1101, 1241
HpaII CCGG 1 cut(s) 284
HphI GGTGA 3 cut(s) 296, 543, 1106
Hpy188III TCNNGA 7 cut(s) 11, 509, 581, 884, 997, 1010, 1062
HpyAV CCTTC 7 cut(s) 153, 561, 614, 769, 798, 913, 1191
HpyCH4III ACNGT 5 cut(s) 17, 782, 1003, 1198, 1208
HpyCH4V TGCA 7 cut(s) 428, 596, 713, 903, 955, 964, 1277
HpyF10VI GCNNNNNNNGC 4 cut(s) 425, 727, 961, 1156
HpyF3I CTNAG 6 cut(s) 382, 411, 420, 477, 759, 1191
Hsp92I GRCGYC 1 cut(s) 498
Hsp92II CATG 6 cut(s) 14, 136, 363, 512, 794, 1130
HspAI GCGC 2 cut(s) 498, 721
KasI GGCGCC 1 cut(s) 497
Kzo9I GATC 5 cut(s) 181, 514, 545, 637, 939
LguI GCTCTTC 1 cut(s) 1114
LmnI GCTCC 5 cut(s) 152, 375, 1076, 1174, 1218
Lsp1109I GCAGC 2 cut(s) 430, 697
LweI GCATC 2 cut(s) 760, 890
MaeI CTAG 1 cut(s) 1245
MaeIII GTNAC 1 cut(s) 782
MalI GATC 5 cut(s) 183, 516, 547, 639, 941
MbiI CCGCTC 2 cut(s) 765, 868
MboI GATC 5 cut(s) 181, 514, 545, 637, 939
MboII GAAGA 8 cut(s) 60, 216, 540, 542, 710, 861, 1075, 1101
MfeI CAATTG 2 cut(s) 186, 492
MflI RGATCY 3 cut(s) 181, 545, 637
MhlI GDGCHC 6 cut(s) 83, 125, 421, 475, 656, 1215
Mly113I GGCGCC 1 cut(s) 498
MlyI GAGTC 1 cut(s) 208
MmeI TCCRAC 1 cut(s) 255
MroXI GAANNNNTTC 2 cut(s) 891, 1035
MseI TTAA 3 cut(s) 138, 630, 1056
MslI CAYNNNNRTG 2 cut(s) 15, 42
MspA1I CMGCKG 1 cut(s) 710
MspI CCGG 1 cut(s) 284
MspR9I CCNGG 5 cut(s) 285, 435, 897, 1098, 1140
MunI CAATTG 2 cut(s) 186, 492
Mva1269I GAATGC 2 cut(s) 596, 619
MvaI CCWGG 4 cut(s) 435, 897, 1098, 1140
MvnI CGCG 2 cut(s) 723, 998
MwoI GCNNNNNNNGC 4 cut(s) 425, 727, 961, 1156
NarI GGCGCC 1 cut(s) 498
NciI CCSGG 1 cut(s) 285
NdeI CATATG 1 cut(s) 1230
NdeII GATC 5 cut(s) 181, 514, 545, 637, 939
NlaIII CATG 6 cut(s) 14, 136, 363, 512, 794, 1130
NlaIV GGNNCC 6 cut(s) 183, 348, 472, 473, 474, 499
NruI TCGCGA 1 cut(s) 998
PagI TCATGA 2 cut(s) 10, 508
PasI CCCWGGG 1 cut(s) 434
PciSI GCTCTTC 1 cut(s) 1114
PctI GAATGC 2 cut(s) 596, 619
PdmI GAANNNNTTC 2 cut(s) 891, 1035
PfeI GAWTC 5 cut(s) 326, 584, 1036, 1101, 1241
PflMI CCANNNNNTGG 1 cut(s) 365
PfoI TCCNGGA 3 cut(s) 283, 895, 1096
PkrI GCNGC 3 cut(s) 445, 712, 1283
PleI GAGTC 1 cut(s) 207
PluTI GGCGCC 1 cut(s) 501
PpsI GAGTC 1 cut(s) 207
Psp124BI GAGCTC 3 cut(s) 125, 656, 1215
Psp6I CCWGG 4 cut(s) 433, 895, 1096, 1138
PspGI CCWGG 4 cut(s) 433, 895, 1096, 1138
PspN4I GGNNCC 6 cut(s) 183, 348, 472, 473, 474, 499
PspOMI GGGCCC 1 cut(s) 471
PspPI GGNCC 2 cut(s) 471, 472
PsrI GAACNNNNNNTAC 2 cut(s) 1147, 1179
PsuI RGATCY 3 cut(s) 181, 545, 637
PvuII CAGCTG 1 cut(s) 710
RruI TCGCGA 1 cut(s) 998
RseI CAYNNNNRTG 2 cut(s) 15, 42
SacI GAGCTC 3 cut(s) 125, 656, 1215
SapI GCTCTTC 1 cut(s) 1114
SaqAI TTAA 3 cut(s) 138, 630, 1056
SatI GCNGC 3 cut(s) 444, 711, 1282
Sau3AI GATC 5 cut(s) 181, 514, 545, 637, 939
Sau96I GGNCC 2 cut(s) 471, 472
SchI GAGTC 1 cut(s) 208
ScrFI CCNGG 5 cut(s) 285, 435, 897, 1098, 1140
SduI GDGCHC 6 cut(s) 83, 125, 421, 475, 656, 1215
SfaNI GCATC 2 cut(s) 760, 890
SfoI GGCGCC 1 cut(s) 499
SmiMI CAYNNNNRTG 2 cut(s) 15, 42
SsiI CCGC 4 cut(s) 723, 765, 868, 1282
SspDI GGCGCC 1 cut(s) 497
SspMI CTAG 1 cut(s) 1245
SstI GAGCTC 3 cut(s) 125, 656, 1215
StyD4I CCNGG 5 cut(s) 283, 433, 895, 1096, 1138
StyI CCWWGG 1 cut(s) 1216
TaaI ACNGT 5 cut(s) 17, 782, 1003, 1198, 1208
TaqI TCGA 2 cut(s) 339, 1023
TauI GCSGC 1 cut(s) 1284
TfiI GAWTC 5 cut(s) 326, 584, 1036, 1101, 1241
Tru1I TTAA 3 cut(s) 138, 630, 1056
Tru9I TTAA 3 cut(s) 138, 630, 1056
TscAI CASTG 5 cut(s) 22, 96, 562, 1078, 1213
TseI GCWGC 2 cut(s) 443, 710
TspDTI ATGAA 3 cut(s) 183, 779, 1004
TspGWI ACGGA 1 cut(s) 1048
TspRI CASTG 5 cut(s) 22, 96, 562, 1078, 1213
Van91I CCANNNNNTGG 1 cut(s) 365
XapI RAATTY 3 cut(s) 245, 522, 715
XmnI GAANNNNTTC 2 cut(s) 891, 1035
XspI CTAG 1 cut(s) 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.