Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002252

Physical Location & Seq

Genomic Coordinates Reverse (-)

52354342 .. 52360614

Gene Structure 6273 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0377300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGACGACCAGAAGGCCGGCCCCGAATCCTCGAGGGCCTCCACCTCGTTTCTCAAAGCCGGCGACCGGCAAATGTTCACGGTGGAGCTCCGACCCGGCGAGACCACCATAGTCTCCTGGAAGAAACTCGTCAGGGACACTAACAAGGTCAATGGCCTGCCTCCGCCCACTGCCACTGCCCCTGACCCTCCCCCCAACGCTCACCCTGGCCTCGAGTCTCGTATAGCTCCGGTACAACCTTCTGGAGAGGGAGAGGGAGAGGAAGGGAAAGATGAAGCTGCGCCGAATCGTTTTAGTGCTGTGATTGAGAAGATTGAGCGCCTATATATGGGTAAAGATAGTAGCGACGATGAAGATCAAAATATTCCTGATGACGATCAGTATGATACTGAGGACTCTTTTATTGATGATGCTGAGTTGGATGAATATTTTGAAGTTGATAATTCAGCTATAAAACATGACGGATTCTTTGTTAACAGGGGCCAACTAGAACGGATAAACACAACTGCTGCATTACCTAACCAGCAACCAAAGAAAAGGAGAAGAAAAGAGGCAAAGAGCCCCGGTGAAACTGATGACAGTCACGTGCCAAATAAACAAGCAAAGTTAGGTAAGACAGCCGCAGCAAAGATTACATCGGGACTTGCAAAGAACTCAACTGCTCTCACTACTATTGCTGTAACCACGGAACACCGTGAAGATGTGAAATTTCAGAATCCATTGAATTCTTCCGGTTATTCATCCACTAAAAAGTCCGCTGATTCTAAAACAGTTATGAATCCTTCTCCTTTGAAAGCATTGGATGGAGATGCTTCTGCACTGCAAGCAGAGGTGAAGGATATTGATAAGTCTAAGTCAGGAATCCTGCTTCCTAAGGACTCGAGTAATAGATTTAAAGATGCCGGTGGGTCCTCTGATGCATCGTATCATAAGTATCATGATAAAAATGCTTATTCGCAAACCAAAACCCAGCCGGGTAGACTATCTAGCAACACTGATGAGCTGGAATCATCAGTTCGGGCGAAAGTGAAAAATGGGATCCGTCAACTGCCTGACCTTAACCTCTCCGACGGGAAGTACTCCGTTCCAACTACAAAAACTTCACATTTGCATCGAAAGGAGGGTTCTAGTGTAAGGCCCAAGGGTTCGATGCTTGAAAAGGCTATTAGGGAGTTGGAGCGGATGGTTGCAGAATCAAGGCCACCTGCTATGGAGAATGCAGACGGAGATAATTCATCCCAAGCAATTAAAAGGAGATTGCCTAGAGAAATAAAGATGAAGCTTGCTAAAGTTGCTAGACTAGCGGCTAGCCATGGAAAAATATCAAAAGAGTTACTTAACCGGCTTATGAGTATTCTTGGCCACTTAATACAGCTCAGGACGTTAAAGAGAAACTTAAAGGTTATGATTAGTATGGGTCTATCAGCCAAAAAGGAGAAAGATGACAGGTTTCAACATATCAAGAAGGAAGTTATAGATATGGTTAAGATAAATGTATCCTCTTTGGAGTCTAAGGCATTGGAAGAAGCTGGAGCCTCCGATGATTTTCAAGAAATAGCCTCTGGAGCGAAAGAAGTCTCTAAAAGAAAGTTGAGCATGGATCCTGTATTAGAGGACAAGATTTGTGACCTCTATGACCTTTATGTTGATGGGCTGGATGAAGATATAGGTCCACAAATAAGAAAGCTCTATGCTGAGCTAGCGGGATTGTGGCCTAGTGGTTTCATGGACAATCATGGCATCAAAAGTGCAATTTGTCGGGCAAAAGATAGACGGAGGGAGCGATACAGCCAAAATAAAGATCAGGAGAAAATGAGGAGGAAAAAGATGTTGACTCCAAAATTAGAGGAGTCTGTTCGAGTTGACGCAAGTTCAATTCCCCAGCAACAGTATATACGAGAGAGATTGGCAACTGAACCTGGCAGTCATGGTTCAGGAAACAAGCCTGTATCAGGTACAACAGCAGCTGTGAGGATACCCAGTCCAATAAACGGTCCTAGCTTTGATAGGCTTAAACAAGAGAAGCTCAAGGGAAGTGCAAGTAATTCCCCTGATGACACGAGGGTCGCAGATGGTGCATTGGTAAAGAAAAAGGTGAAGAGGAAGCCAGATCAAGAGTTGGATGAAACTCGGATACGGCCAGAAAAATTACCTTCCCAACAAGGTGAGGAAAGACAAAAGTCATTCAAGCAGGCGGTTGGTGTACCCCATAAGTCAAACCATCAATCCACCGGCCTTCCTAGCGCTGAGCAGTCTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010492 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0043436 GO:0043565 GO:0044237 GO:0044281 GO:0048507 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0098727 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

753

Amino Acids

83.18

Weight (kDa)

9.13

Isoelectric Point (pI)

44.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HUN	PF08729	118 - 164	2.8e-12	HPC2 and ubinuclein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37750
fragaria_vesca	FvH4_1g18270 FvH4_1g18270 FvH4_2g32640 FvH4_2g32640
malus_domestica	MD02G1190000.v1.1 MD08G1077100.v1.1 MD15G1064600.v1.1 MD15G1301100.v1.1
prunus_persica	Prupe.1G418600_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1
pyrus_communis	pycom02g15390 pycom02g15400 pycom08g06410 pycom15g06140 pycom15g26370
rosa_chinensis	RchiOBHm_Chr2g0108831 RchiOBHm_Chr6g0310091
rosa_laevigata	RLG00000010512 RLG00000017692
rosa_multiflora	Rmu_sc0000294.1_g000022 Rmu_sc0003973.1_g000013
rosa_roxburghii	Rroxscaffold_2G00134780 Rroxscaffold_7G00158880
rosa_rugosa	Rorug02G0156300 Rorug02G0156400 Rorug06G0377300 Rorug06G0377300
rosa_samantha	Rh2AG206600 Rh2AG206700 Rh2BG217800 Rh2CG209800 Rh2DG213000 Rh6AG491300 Rh6BG500600 Rh6CG505500 Rh6CG505600 Rh6DG491500 Rh6DG491600
rosa_wichuraiana	Rw2G016430 Rw6G042740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1213
AasI	GACNNNNNNGTC	1 cut(s)	2063
AbsI	CCTCGAGG	1 cut(s)	31
Acc36I	ACCTGC	1 cut(s)	1213
AccBSI	CCGCTC	1 cut(s)	1180
AccI	GTMKAC	1 cut(s)	979
AciI	CCGC	7 cut(s)	164, 621, 756, 1180, 1304, 1703, 2195
AclWI	GGATC	4 cut(s)	1033, 1046, 1595, 1608
AcoI	YGGCCR	2 cut(s)	1360, 2138
AcsI	RAATTY	2 cut(s)	707, 724
AcvI	CACGTG	1 cut(s)	586
AfaI	GTAC	4 cut(s)	234, 1079, 1957, 2205
AfeI	AGCGCT	1 cut(s)	2245
AfiI	CCNNNNNNNGG	4 cut(s)	66, 328, 1952, 1991
AgsI	TTSAA	8 cut(s)	434, 724, 793, 1157, 1454, 1550, 1875, 2188
AjnI	CCWGG	3 cut(s)	116, 205, 1918
Alw21I	GWGCWC	1 cut(s)	90
Alw26I	GTCTC	4 cut(s)	95, 118, 222, 1582
AlwI	GGATC	4 cut(s)	1033, 1046, 1595, 1608
AlwNI	CAGNNNCTG	1 cut(s)	1967
Ama87I	CYCGRG	3 cut(s)	31, 212, 880
Aor51HI	AGCGCT	1 cut(s)	2245
ApeKI	GCWGC	4 cut(s)	278, 509, 623, 1964
ApoI	RAATTY	2 cut(s)	707, 724
ArsI	GACNNNNNNTTYG	2 cut(s)	452, 484
AspLEI	GCGC	3 cut(s)	283, 321, 2246
AspS9I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1670, 1994
AsuC2I	CCSGG	3 cut(s)	96, 564, 975
AsuHPI	GGTGA	5 cut(s)	194, 578, 844, 2107, 2177
AsuNHI	GCTAGC	2 cut(s)	1307, 1699
AvaI	CYCGRG	3 cut(s)	31, 212, 880
AvaII	GGWCC	3 cut(s)	909, 1670, 1994
AxyI	CCTNAGG	1 cut(s)	873
BalI	TGGCCA	1 cut(s)	1362
BamHI	GGATCC	2 cut(s)	1038, 1600
BanII	GRGCYC	2 cut(s)	90, 563
BauI	CACGAG	1 cut(s)	2059
BbrPI	CACGTG	1 cut(s)	586
Bbv12I	GWGCWC	1 cut(s)	90
BbvI	GCAGC	4 cut(s)	265, 496, 635, 1976
BccI	CCATC	5 cut(s)	797, 1177, 1643, 2066, 2229
BceAI	ACGGC	1 cut(s)	2153
BciT130I	CCWGG	3 cut(s)	118, 207, 1920
BciVI	GTATCC	3 cut(s)	1507, 1968, 2127
BcnI	CCSGG	3 cut(s)	96, 564, 975
BcoDI	GTCTC	4 cut(s)	95, 118, 222, 1582
BfoI	RGCGCY	2 cut(s)	322, 2247
BfuAI	ACCTGC	1 cut(s)	1213
BfuI	GTATCC	3 cut(s)	1507, 1968, 2127
BisI	GCNGC	6 cut(s)	279, 510, 621, 624, 1305, 1965
BlpI	GCTNAGC	2 cut(s)	1695, 2247
BlsI	GCNGC	6 cut(s)	280, 511, 622, 625, 1306, 1966
BmcAI	AGTACT	1 cut(s)	1079
Bme1390I	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1920
Bme18I	GGWCC	3 cut(s)	909, 1670, 1994
BmeT110I	CYCGRG	3 cut(s)	31, 212, 880
BmgT120I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1670, 1994
BmiI	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1534, 1602
BmrFI	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1920
BmrI	ACTGGG	1 cut(s)	1974
BmsI	GCATC	8 cut(s)	400, 799, 889, 907, 929, 1120, 1140, 1749
BmtI	GCTAGC	2 cut(s)	1311, 1703
BmuI	ACTGGG	1 cut(s)	1974
BoxI	GACNNNNGTC	1 cut(s)	2179
BpmI	CTGGAG	3 cut(s)	264, 1551, 1584
Bpu10I	CCTNAGC	1 cut(s)	1376
Bpu1102I	GCTNAGC	2 cut(s)	1695, 2247
BpuEI	CTTGAG	1 cut(s)	2012
BpuMI	CCSGG	3 cut(s)	96, 564, 975
BsaAI	YACGTR	1 cut(s)	586
BsaBI	GATNNNNATC	2 cut(s)	354, 375
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	5 cut(s)	205, 562, 684, 1140, 1312
BsaWI	WCCGGW	2 cut(s)	229, 731
Bsc4I	CCNNNNNNNGG	4 cut(s)	66, 328, 1952, 1991
Bse118I	RCCGGY	6 cut(s)	17, 59, 66, 902, 1341, 2231
Bse1I	ACTGG	1 cut(s)	1980
Bse21I	CCTNAGG	1 cut(s)	873
Bse8I	GATNNNNATC	2 cut(s)	354, 375
BseBI	CCWGG	3 cut(s)	118, 207, 1920
BseDI	CCNNGG	5 cut(s)	205, 562, 684, 1140, 1312
BseGI	GGATG	7 cut(s)	427, 740, 808, 1188, 1235, 1663, 2128
BseJI	GATNNNNATC	2 cut(s)	354, 375
BseLI	CCNNNNNNNGG	4 cut(s)	66, 328, 1952, 1991
BseMII	CTCAG	5 cut(s)	381, 405, 1390, 1686, 2238
BseNI	ACTGG	1 cut(s)	1980
BseRI	GAGGAG	2 cut(s)	1831, 1862
BseXI	GCAGC	4 cut(s)	265, 496, 635, 1976
BseYI	CCCAGC	2 cut(s)	969, 1881
BsgI	GTGCAG	1 cut(s)	801
Bsh1285I	CGRYCG	1 cut(s)	67
BsiEI	CGRYCG	1 cut(s)	67
BsiHKAI	GWGCWC	1 cut(s)	90
BsiHKCI	CYCGRG	3 cut(s)	31, 212, 880
BslFI	GGGAC	2 cut(s)	149, 654
BslI	CCNNNNNNNGG	4 cut(s)	66, 328, 1952, 1991
BsmAI	GTCTC	4 cut(s)	95, 118, 222, 1582
BsmFI	GGGAC	2 cut(s)	149, 654
BsmI	GAATGC	1 cut(s)	1222
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	3 cut(s)	31, 212, 880
Bsp1286I	GDGCHC	2 cut(s)	90, 563
Bsp143I	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
Bsp1720I	GCTNAGC	2 cut(s)	1695, 2247
Bsp19I	CCATGG	1 cut(s)	1312
BspACI	CCGC	7 cut(s)	164, 621, 756, 1180, 1304, 1703, 2195
BspCNI	CTCAG	5 cut(s)	382, 406, 1389, 1687, 2239
BspHI	TCATGA	1 cut(s)	937
BspLI	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1534, 1602
BspMI	ACCTGC	1 cut(s)	1213
BspOI	GCTAGC	2 cut(s)	1311, 1703
BspPI	GGATC	4 cut(s)	1033, 1046, 1595, 1608
BspTNI	GGTCTC	1 cut(s)	95
BsrBI	CCGCTC	1 cut(s)	1180
BsrFI	RCCGGY	6 cut(s)	17, 59, 66, 902, 1341, 2231
BsrI	ACTGG	1 cut(s)	1980
BssAI	RCCGGY	6 cut(s)	17, 59, 66, 902, 1341, 2231
BssECI	CCNNGG	5 cut(s)	205, 562, 684, 1140, 1312
BssMI	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
BssSI	CACGAG	1 cut(s)	2059
BssT1I	CCWWGG	2 cut(s)	1140, 1312
Bst2BI	CACGAG	1 cut(s)	2059
Bst2UI	CCWGG	3 cut(s)	118, 207, 1920
Bst4CI	ACNGT	6 cut(s)	82, 581, 695, 772, 1890, 1994
Bst6I	CTCTTC	1 cut(s)	2093
BstAPI	GCANNNNNTGC	1 cut(s)	2075
BstBAI	YACGTR	1 cut(s)	586
BstC8I	GCNNGC	8 cut(s)	19, 61, 158, 825, 1284, 1309, 1701, 2193
BstDEI	CTNAG	8 cut(s)	390, 414, 852, 873, 1376, 1512, 1695, 2247
BstDSI	CCRYGG	2 cut(s)	684, 1312
BstENI	CCTNNNNNAGG	1 cut(s)	1950
BstF5I	GGATG	7 cut(s)	427, 740, 808, 1188, 1235, 1663, 2128
BstH2I	RGCGCY	2 cut(s)	322, 2247
BstHHI	GCGC	3 cut(s)	283, 321, 2246
BstKTI	GATC	6 cut(s)	358, 379, 1041, 1603, 1804, 2113
BstMAI	GTCTC	4 cut(s)	95, 118, 222, 1582
BstMBI	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
BstMCI	CGRYCG	1 cut(s)	67
BstMWI	GCNNNNNNNGC	7 cut(s)	824, 1292, 1301, 1565, 1700, 2075, 2241
BstNI	CCWGG	3 cut(s)	118, 207, 1920
BstPAI	GACNNNNGTC	1 cut(s)	2179
BstSCI	CCNGG	6 cut(s)	94, 116, 205, 562, 973, 1918
BstV1I	GCAGC	4 cut(s)	265, 496, 635, 1976
BstX2I	RGATCY	2 cut(s)	1038, 1600
BstYI	RGATCY	2 cut(s)	1038, 1600
Bsu36I	CCTNAGG	1 cut(s)	873
BsuI	GTATCC	3 cut(s)	1507, 1968, 2127
BtgI	CCRYGG	2 cut(s)	684, 1312
BtsCI	GGATG	7 cut(s)	427, 740, 808, 1188, 1235, 1663, 2128
BtsI	GCAGTG	3 cut(s)	168, 174, 818
BtsIMutI	CAGTG	4 cut(s)	168, 174, 818, 993
BveI	ACCTGC	1 cut(s)	1213
Cac8I	GCNNGC	8 cut(s)	19, 61, 158, 825, 1284, 1309, 1701, 2193
CaiI	CAGNNNCTG	1 cut(s)	1967
CciI	TCATGA	1 cut(s)	937
CfoI	GCGC	3 cut(s)	283, 321, 2246
Cfr10I	RCCGGY	6 cut(s)	17, 59, 66, 902, 1341, 2231
Cfr13I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1670, 1994
CseI	GACGC	1 cut(s)	1874
Csp6I	GTAC	4 cut(s)	233, 1078, 1956, 2204
CviAII	CATG	7 cut(s)	458, 938, 1313, 1597, 1726, 1736, 1928
CviQI	GTAC	4 cut(s)	233, 1078, 1956, 2204
DdeI	CTNAG	8 cut(s)	390, 414, 852, 873, 1376, 1512, 1695, 2247
DpnI	GATC	6 cut(s)	357, 378, 1040, 1602, 1803, 2112
DpnII	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
DraI	TTTAAA	1 cut(s)	895
DrdI	GACNNNNNNGTC	1 cut(s)	2063
DseDI	GACNNNNNNGTC	1 cut(s)	2063
EaeI	YGGCCR	2 cut(s)	1360, 2138
Eam1104I	CTCTTC	1 cut(s)	2093
EarI	CTCTTC	1 cut(s)	2093
EciI	GGCGGA	1 cut(s)	153
Ecl136II	GAGCTC	1 cut(s)	88
Eco130I	CCWWGG	2 cut(s)	1140, 1312
Eco24I	GRGCYC	2 cut(s)	90, 563
Eco31I	GGTCTC	1 cut(s)	95
Eco47I	GGWCC	3 cut(s)	909, 1670, 1994
Eco47III	AGCGCT	1 cut(s)	2245
Eco53kI	GAGCTC	1 cut(s)	88
Eco72I	CACGTG	1 cut(s)	586
Eco81I	CCTNAGG	1 cut(s)	873
Eco88I	CYCGRG	3 cut(s)	31, 212, 880
EcoICRI	GAGCTC	1 cut(s)	88
EcoNI	CCTNNNNNAGG	1 cut(s)	1950
EcoO109I	RGGNCCY	2 cut(s)	36, 909
EcoRI	GAATTC	1 cut(s)	724
EcoRII	CCWGG	3 cut(s)	116, 205, 1918
EcoT14I	CCWWGG	2 cut(s)	1140, 1312
EcoT22I	ATGCAT	1 cut(s)	922
EcoT38I	GRGCYC	2 cut(s)	90, 563
ErhI	CCWWGG	2 cut(s)	1140, 1312
FaeI	CATG	7 cut(s)	461, 941, 1316, 1600, 1729, 1739, 1931
FalI	AAGNNNNNCTT	4 cut(s)	1320, 1352, 1379, 1411
FaqI	GGGAC	2 cut(s)	149, 654
FatI	CATG	7 cut(s)	457, 937, 1312, 1596, 1725, 1735, 1927
FauI	CCCGC	1 cut(s)	1696
FblI	GTMKAC	1 cut(s)	979
Fnu4HI	GCNGC	6 cut(s)	279, 510, 621, 624, 1305, 1965
FokI	GGATG	7 cut(s)	434, 727, 815, 1195, 1222, 1670, 2135
FriOI	GRGCYC	2 cut(s)	90, 563
FseI	GGCCGGCC	1 cut(s)	21
Fsp4HI	GCNGC	6 cut(s)	279, 510, 621, 624, 1305, 1965
GlaI	GCGC	3 cut(s)	282, 320, 2245
GluI	GCNGC	6 cut(s)	279, 510, 621, 624, 1305, 1965
GsaI	CCCAGC	2 cut(s)	973, 1885
GsuI	CTGGAG	3 cut(s)	264, 1551, 1584
HaeII	RGCGCY	2 cut(s)	322, 2247
HgaI	GACGC	1 cut(s)	1874
HhaI	GCGC	3 cut(s)	283, 321, 2246
Hin1II	CATG	7 cut(s)	461, 941, 1316, 1600, 1729, 1739, 1931
Hin6I	GCGC	3 cut(s)	281, 319, 2244
HinP1I	GCGC	3 cut(s)	281, 319, 2244
HincII	GTYRAC	4 cut(s)	475, 1046, 1833, 1864
HindII	GTYRAC	4 cut(s)	475, 1046, 1833, 1864
HindIII	AAGCTT	1 cut(s)	1280
HpaI	GTTAAC	1 cut(s)	475
HphI	GGTGA	5 cut(s)	194, 578, 844, 2107, 2177
Hpy166II	GTNNAC	8 cut(s)	78, 475, 980, 1046, 1673, 1833, 1864, 2204
Hpy188I	TCNGA	6 cut(s)	92, 714, 916, 1069, 1540, 2133
Hpy8I	GTNNAC	8 cut(s)	78, 475, 980, 1046, 1673, 1833, 1864, 2204
Hpy99I	CGWCG	2 cut(s)	350, 1073
HpyAV	CCTTC	8 cut(s)	7, 249, 257, 792, 829, 1459, 2163, 2246
HpyCH4III	ACNGT	6 cut(s)	82, 581, 695, 772, 1890, 1994
HpyCH4IV	ACGT	2 cut(s)	585, 1382
HpyF10VI	GCNNNNNNNGC	7 cut(s)	824, 1292, 1301, 1565, 1700, 2075, 2241
HpyF3I	CTNAG	8 cut(s)	390, 414, 852, 873, 1376, 1512, 1695, 2247
HpySE526I	ACGT	2 cut(s)	585, 1382
Hsp92II	CATG	7 cut(s)	461, 941, 1316, 1600, 1729, 1739, 1931
HspAI	GCGC	3 cut(s)	281, 319, 2244
KroI	GCCGGC	2 cut(s)	17, 59
KroNI	GCCGGC	2 cut(s)	19, 61
KspAI	GTTAAC	1 cut(s)	475
Kzo9I	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
LmnI	GCTCC	7 cut(s)	85, 93, 232, 1177, 1532, 1565, 1780
Lsp1109I	GCAGC	4 cut(s)	265, 496, 635, 1976
LweI	GCATC	8 cut(s)	400, 799, 889, 907, 929, 1120, 1140, 1749
MaeII	ACGT	2 cut(s)	585, 1382
MaeIII	GTNAC	4 cut(s)	581, 679, 1332, 1625
MalI	GATC	6 cut(s)	357, 378, 1040, 1602, 1803, 2112
MbiI	CCGCTC	1 cut(s)	1180
MboI	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
MboII	GAAGA	9 cut(s)	133, 322, 365, 555, 710, 720, 1535, 1673, 2110
MflI	RGATCY	2 cut(s)	1038, 1600
MhlI	GDGCHC	2 cut(s)	90, 563
MlsI	TGGCCA	1 cut(s)	1362
MluNI	TGGCCA	1 cut(s)	1362
MlyI	GAGTC	6 cut(s)	224, 389, 872, 1517, 1828, 1859
MmeI	TCCRAC	6 cut(s)	115, 399, 1092, 1112, 1155, 2100
Mox20I	TGGCCA	1 cut(s)	1362
Mph1103I	ATGCAT	1 cut(s)	922
MroNI	GCCGGC	2 cut(s)	17, 59
MscI	TGGCCA	1 cut(s)	1362
Msp20I	TGGCCA	1 cut(s)	1362
MspA1I	CMGCKG	2 cut(s)	758, 1967
MspR9I	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1920
Mva1269I	GAATGC	1 cut(s)	1222
MvaI	CCWGG	3 cut(s)	118, 207, 1920
MwoI	GCNNNNNNNGC	7 cut(s)	824, 1292, 1301, 1565, 1700, 2075, 2241
NaeI	GCCGGC	2 cut(s)	19, 61
NciI	CCSGG	3 cut(s)	96, 564, 975
NcoI	CCATGG	1 cut(s)	1312
NdeII	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
NgoMIV	GCCGGC	2 cut(s)	17, 59
NheI	GCTAGC	2 cut(s)	1307, 1699
NlaIII	CATG	7 cut(s)	461, 941, 1316, 1600, 1729, 1739, 1931
NlaIV	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1534, 1602
NmuCI	GTSAC	2 cut(s)	581, 1625
NsiI	ATGCAT	1 cut(s)	922
PaeR7I	CTCGAG	3 cut(s)	31, 212, 880
PagI	TCATGA	1 cut(s)	937
PaqCI	CACCTGC	1 cut(s)	1213
PcsI	WCGNNNNNNNCGW	1 cut(s)	1780
PctI	GAATGC	1 cut(s)	1222
PdiI	GCCGGC	2 cut(s)	19, 61
PfeI	GAWTC	9 cut(s)	26, 286, 465, 715, 761, 778, 861, 1007, 1193
PfoI	TCCNGGA	1 cut(s)	116
PkrI	GCNGC	6 cut(s)	280, 511, 622, 625, 1306, 1966
PleI	GAGTC	6 cut(s)	223, 389, 872, 1516, 1828, 1858
PmaCI	CACGTG	1 cut(s)	586
PmlI	CACGTG	1 cut(s)	586
PpsI	GAGTC	6 cut(s)	223, 389, 872, 1516, 1828, 1858
Ppu21I	YACGTR	1 cut(s)	586
PpuMI	RGGWCCY	1 cut(s)	909
PshAI	GACNNNNGTC	1 cut(s)	2179
Psp124BI	GAGCTC	1 cut(s)	90
Psp5II	RGGWCCY	1 cut(s)	909
Psp6I	CCWGG	3 cut(s)	116, 205, 1918
PspCI	CACGTG	1 cut(s)	586
PspFI	CCCAGC	2 cut(s)	969, 1881
PspGI	CCWGG	3 cut(s)	116, 205, 1918
PspN4I	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1534, 1602
PspPI	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1670, 1994
PspPPI	RGGWCCY	1 cut(s)	909
PspXI	VCTCGAGB	3 cut(s)	31, 212, 880
PstNI	CAGNNNCTG	1 cut(s)	1967
PsuI	RGATCY	2 cut(s)	1038, 1600
PvuII	CAGCTG	1 cut(s)	1967
RigI	GGCCGGCC	1 cut(s)	21
RsaI	GTAC	4 cut(s)	234, 1079, 1957, 2205
RsaNI	GTAC	4 cut(s)	233, 1078, 1956, 2204
SacI	GAGCTC	1 cut(s)	90
SatI	GCNGC	6 cut(s)	279, 510, 621, 624, 1305, 1965
Sau3AI	GATC	6 cut(s)	355, 376, 1038, 1600, 1801, 2110
Sau96I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1670, 1994
ScaI	AGTACT	1 cut(s)	1079
SchI	GAGTC	6 cut(s)	224, 389, 872, 1517, 1828, 1859
ScrFI	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1920
SduI	GDGCHC	2 cut(s)	90, 563
SfaNI	GCATC	8 cut(s)	400, 799, 889, 907, 929, 1120, 1140, 1749
Sfr274I	CTCGAG	3 cut(s)	31, 212, 880
SinI	GGWCC	3 cut(s)	909, 1670, 1994
SlaI	CTCGAG	3 cut(s)	31, 212, 880
SmlI	CTYRAG	4 cut(s)	31, 212, 880, 2027
SmoI	CTYRAG	4 cut(s)	31, 212, 880, 2027
SsiI	CCGC	7 cut(s)	164, 621, 756, 1180, 1304, 1703, 2195
SspI	AATATT	2 cut(s)	364, 428
SstI	GAGCTC	1 cut(s)	90
StyD4I	CCNGG	6 cut(s)	94, 116, 205, 562, 973, 1918
StyI	CCWWGG	2 cut(s)	1140, 1312
TaaI	ACNGT	6 cut(s)	82, 581, 695, 772, 1890, 1994
TaiI	ACGT	2 cut(s)	588, 1385
TaqI	TCGA	6 cut(s)	32, 213, 881, 1114, 1148, 1858
TatI	WGTACW	1 cut(s)	1077
TauI	GCSGC	2 cut(s)	623, 1307
TfiI	GAWTC	9 cut(s)	26, 286, 465, 715, 761, 778, 861, 1007, 1193
TscAI	CASTG	4 cut(s)	175, 181, 825, 1000
TseFI	GTSAC	2 cut(s)	581, 1625
TseI	GCWGC	4 cut(s)	278, 509, 623, 1964
Tsp45I	GTSAC	2 cut(s)	581, 1625
TspGWI	ACGGA	7 cut(s)	477, 508, 701, 1031, 1072, 1239, 1789
TspRI	CASTG	4 cut(s)	175, 181, 825, 1000
VpaK11BI	GGWCC	3 cut(s)	909, 1670, 1994
XagI	CCTNNNNNAGG	1 cut(s)	1950
XapI	RAATTY	2 cut(s)	707, 724
XhoI	CTCGAG	3 cut(s)	31, 212, 880
XmiI	GTMKAC	1 cut(s)	979
ZrmI	AGTACT	1 cut(s)	1079
Zsp2I	ATGCAT	1 cut(s)	922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.