Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0002252

Physical Location & Seq

Genomic Coordinates Reverse (-)

4972349 .. 4975503

Gene Structure 3155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g06410.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGAAGTCCATGAATGATCATAACAATAACAACAATGGAAGCAGTAACAGTAACAATAATAACTGGTTGGGTTTTTCACTCTTACCCCACATGAAAATGGAGGCTGCTGCTTCTTCCTCCTCCTCAGCTACCCTCCCAAGCAACAGCAGCTTCTACAACCTCAGCAGCTCTGGGCTCTGCTGCTATGGAGTTGGAGAAAATGTTAACTTTCACTACTCTCCTCTCTCTGCAATGCCCCTCAGGTCAGATGGCTCTCTCTGCATCATGGAAGCTCTCAGCAGGTCACAAACAGGAATGATGCCCAACACATCCCCAAAACTAGAGGACTTTCTGGGAGGAGCAGCTCATGATTATGTGAGTGAGGAGAGAGAAGCCATGGCTCTGAGCTTGGACAGCTACTACAATGCAGAGGCAGAGCAGCAGCAGAATCACCACATTCCACTCCATTCCAGTTCCTACTACTCCGGAATACCAATCCAAGGACTCTACCAAACCCAAATGGAGGAAGAACATTCTAAGAATACCCAAATGACTCAAATCCCAGAGGACTTGAAAACCTGCTGGGTTTCCAGGCAGTACTCTGCCCACCCATCTCTGGAGCACCACCACATGAATAATGTAACCATGGTTGATGACAATGGCGGTTCTGGGTCCATTAATGGCGGCATGAACCGCGGCGACTTGCAGTCTCTAACGTTGTCCATGAGCCCTGGATCACAGTCCAGCTGTGTCACAGCTCCAAGGCAGATCTCTCCCACTCAGACAGAATGTGCAGTGGCAGTCATTGAAACAAAGAAGAGAGGATGTGGAAAGCTTGGCCAGAAGCAGCCTGTTCACAGGAAGTCCATTGACACATTTGGGCAGAGAACTTCACAGTTTAGAGGTGTCACAAGGCATAGGTGGACTGGAAGATATGAGGCACATCTGTGGGACAACAGCTGCAAGAAGGAAGGGCAAACCAGAAAAGGAAGGCAAGTATATCTTGGAGGTTATGATATGGAGGAGAAAGCTGCTAGAGCATATGATCTTGCTGCTCTTAAGTACTGGGGTTCGTCAACTCATATAAACTTTCCGTTGGAAAATTACGCCGCACAACTTGAAGAGATGAAGAATATGAGCCGGCAGGAATATGTTGCGCATCTGCGAAGGAAAAGCAGTGGATTTTCGAGAGGAGCTTCAATGTACCGAGGCGTGACAAGACATCACCAGCATGGGAGATGGCAAGCTAGGATTGGCAGGGTTGCTGGGAACAAGGATCTTTATCTTGGAACTTTTGGCACCCAAGAGGAAGCTGCAGAGGCTTATGACATAGCTGCAATCAAGTTCCGCGGCGCAAATGCGGTCACCAACTTTGACATTACCAAATATGACGTTGAAAAAATCATGTCCAGCAATACCCTACTCGCCGGAGAGTTTGCTAGGCGCACCAAGGTGGTCGAACCTAACATTGCAGCGCCAGCCATTGAGTATAACCCACCAACACAGAACAATGCGGAAGCCAATCAACCCGAAATCAACAATGGGAATAGCCTAGACTGGAAGATGGCACTGTACCAATCTGCAGCTCAGCAACAAGCAGACAGTTGTGTTCAAACACTTGATCAGAAATCGGTCGGTTCGGCGAGCTATAGAAATCTCTCATTCTCAATGGCATTGGAGGATTATATTGGAGTTGAATCCGTGCACTCAAGTCAGACAATGATGGATGAAACAGCTAGGGTGGGGCCTCATTTTTCGAATCCGTCCTCGTTGGTGACAAGTTTGGGCAGCTCCAGAGAAGCTAGCCCTGATAAATCGGGCTCCAACATGCTGTTTGCAAAACCTCCATTGGCATCAAAGTTTGTAAGTCCAACCTCTGCAGCAGCTGTTAGCTCCTGGTTCCCATCAGCACAGCTGAGGCCTGCCGCCATCTCCATGTCTCAATTGCCTCTCTTTGCTGCCTGGAATGAGACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010492 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0043436 GO:0043565 GO:0044237 GO:0044281 GO:0048507 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0098727 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

652

Amino Acids

71.67

Weight (kDa)

6.9

Isoelectric Point (pI)

52.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37750
fragaria_vesca	FvH4_1g18270 FvH4_1g18270 FvH4_2g32640 FvH4_2g32640
malus_domestica	MD02G1190000.v1.1 MD08G1077100.v1.1 MD15G1064600.v1.1 MD15G1301100.v1.1
prunus_persica	Prupe.1G418600_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1
pyrus_communis	pycom02g15390 pycom02g15400 pycom08g06410 pycom15g06140 pycom15g26370
rosa_chinensis	RchiOBHm_Chr2g0108831 RchiOBHm_Chr6g0310091
rosa_laevigata	RLG00000010512 RLG00000017692
rosa_multiflora	Rmu_sc0000294.1_g000022 Rmu_sc0003973.1_g000013
rosa_roxburghii	Rroxscaffold_2G00134780 Rroxscaffold_7G00158880
rosa_rugosa	Rorug02G0156300 Rorug02G0156400 Rorug06G0377300 Rorug06G0377300
rosa_samantha	Rh2AG206600 Rh2AG206700 Rh2BG217800 Rh2CG209800 Rh2DG213000 Rh6AG491300 Rh6BG500600 Rh6CG505500 Rh6CG505600 Rh6DG491500 Rh6DG491600
rosa_wichuraiana	Rw2G016430 Rw6G042740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1137
Acc36I	ACCTGC	2 cut(s)	270, 566
AccB1I	GGYRCC	1 cut(s)	1277
AccII	CGCG	2 cut(s)	675, 1329
AccIII	TCCGGA	1 cut(s)	464
AclI	AACGTT	1 cut(s)	695
AclWI	GGATC	2 cut(s)	721, 1263
AcoI	YGGCCR	1 cut(s)	817
AfaI	GTAC	4 cut(s)	578, 1043, 1184, 1553
AfiI	CCNNNNNNNGG	3 cut(s)	479, 502, 595
AflII	CTTAAG	1 cut(s)	1037
AgsI	TTSAA	7 cut(s)	553, 788, 1100, 1179, 1376, 1592, 1676
AhdI	GACNNNNNGTC	1 cut(s)	685
AjnI	CCWGG	4 cut(s)	569, 709, 1874, 1940
AleI	CACNNNNGTG	2 cut(s)	925, 1430
Alw21I	GWGCWC	2 cut(s)	603, 1686
Alw26I	GTCTC	3 cut(s)	693, 1923, 1943
Alw44I	GTGCAC	1 cut(s)	1682
AlwI	GGATC	2 cut(s)	721, 1263
AlwNI	CAGNNNCTG	1 cut(s)	1865
Aor13HI	TCCGGA	1 cut(s)	464
AoxI	GGCC	3 cut(s)	817, 1724, 1898
ApaLI	GTGCAC	1 cut(s)	1682
AseI	ATTAAT	1 cut(s)	657
AspLEI	GCGC	4 cut(s)	1138, 1334, 1425, 1456
AspS9I	GGNCC	2 cut(s)	651, 1724
AsuHPI	GGTGA	4 cut(s)	422, 1196, 1336, 1765
AsuII	TTCGAA	1 cut(s)	1736
AsuNHI	GCTAGC	1 cut(s)	1781
AvaII	GGWCC	1 cut(s)	651
AxyI	CCTNAGG	1 cut(s)	239
BaeGI	GKGCMC	1 cut(s)	1686
BalI	TGGCCA	1 cut(s)	819
BanI	GGYRCC	1 cut(s)	1277
BanII	GRGCYC	3 cut(s)	177, 710, 1802
Bbv12I	GWGCWC	2 cut(s)	603, 1686
BbvCI	CCTCAGC	3 cut(s)	124, 161, 1895
BccI	CCATC	7 cut(s)	242, 598, 1212, 1537, 1696, 1891, 1916
BciT130I	CCWGG	4 cut(s)	571, 711, 1876, 1942
BclI	TGATCA	2 cut(s)	16, 1600
BcoDI	GTCTC	3 cut(s)	693, 1923, 1943
BfaI	CTAG	8 cut(s)	320, 1014, 1227, 1419, 1532, 1716, 1782, 1954
BfmI	CTRYAG	4 cut(s)	1293, 1560, 1627, 1857
BfoI	RGCGCY	1 cut(s)	1457
BfrI	CTTAAG	1 cut(s)	1037
BfuAI	ACCTGC	2 cut(s)	270, 566
BglII	AGATCT	1 cut(s)	747
BlpI	GCTNAGC	1 cut(s)	1566
BmcAI	AGTACT	2 cut(s)	578, 1043
Bme1390I	CCNGG	4 cut(s)	571, 711, 1876, 1942
Bme18I	GGWCC	1 cut(s)	651
BmeRI	GACNNNNNGTC	1 cut(s)	685
BmgT120I	GGNCC	2 cut(s)	651, 1724
BmiI	GGNNCC	5 cut(s)	652, 1279, 1725, 1801, 1880
BmrFI	CCNGG	4 cut(s)	571, 711, 1876, 1942
BmrI	ACTGGG	1 cut(s)	1054
BmsI	GCATC	4 cut(s)	270, 288, 1147, 1841
BmtI	GCTAGC	1 cut(s)	1785
BmuI	ACTGGG	1 cut(s)	1054
BpmI	CTGGAG	2 cut(s)	617, 1756
Bpu10I	CCTNAGC	3 cut(s)	124, 161, 1895
Bpu1102I	GCTNAGC	1 cut(s)	1566
Bpu14I	TTCGAA	1 cut(s)	1736
BpuEI	CTTGAG	1 cut(s)	1672
BsaBI	GATNNNNATC	1 cut(s)	1260
BsaI	GGTCTC	1 cut(s)	1943
BsaJI	CCNNGG	9 cut(s)	375, 478, 624, 673, 709, 740, 1186, 1327, 1428
BsaWI	WCCGGW	1 cut(s)	464
BsaXI	ACNNNNNCTCC	2 cut(s)	186, 216
Bsc4I	CCNNNNNNNGG	3 cut(s)	479, 502, 595
Bse118I	RCCGGY	1 cut(s)	1119
Bse1I	ACTGG	5 cut(s)	68, 450, 910, 1049, 1541
Bse21I	CCTNAGG	1 cut(s)	239
Bse3DI	GCAATG	2 cut(s)	237, 1446
Bse8I	GATNNNNATC	1 cut(s)	1260
BseAI	TCCGGA	1 cut(s)	464
BseBI	CCWGG	4 cut(s)	571, 711, 1876, 1942
BseDI	CCNNGG	9 cut(s)	375, 478, 624, 673, 709, 740, 1186, 1327, 1428
BseGI	GGATG	3 cut(s)	308, 809, 1711
BseJI	GATNNNNATC	1 cut(s)	1260
BseLI	CCNNNNNNNGG	3 cut(s)	479, 502, 595
BseMI	GCAATG	2 cut(s)	237, 1446
BseMII	CTCAG	8 cut(s)	138, 175, 253, 289, 374, 773, 1580, 1886
BseNI	ACTGG	5 cut(s)	68, 450, 910, 1049, 1541
BseRI	GAGGAG	7 cut(s)	109, 112, 210, 351, 377, 1016, 1185
BseSI	GKGCMC	1 cut(s)	1686
BseYI	CCCAGC	2 cut(s)	561, 1244
BsgI	GTGCAG	1 cut(s)	792
Bsh1236I	CGCG	2 cut(s)	675, 1329
Bsh1285I	CGRYCG	1 cut(s)	1614
BshFI	GGCC	3 cut(s)	819, 1726, 1900
BshNI	GGYRCC	1 cut(s)	1277
BsiEI	CGRYCG	1 cut(s)	1614
BsiHKAI	GWGCWC	2 cut(s)	603, 1686
BsiSI	CCGG	3 cut(s)	465, 1120, 1407
BslFI	GGGAC	1 cut(s)	944
BslI	CCNNNNNNNGG	3 cut(s)	479, 502, 595
BsmAI	GTCTC	3 cut(s)	693, 1923, 1943
BsmFI	GGGAC	1 cut(s)	944
BsnI	GGCC	3 cut(s)	819, 1726, 1900
Bso31I	GGTCTC	1 cut(s)	1943
Bsp119I	TTCGAA	1 cut(s)	1736
Bsp1286I	GDGCHC	5 cut(s)	177, 603, 710, 1686, 1802
Bsp13I	TCCGGA	1 cut(s)	464
Bsp143I	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
Bsp1720I	GCTNAGC	1 cut(s)	1566
Bsp19I	CCATGG	2 cut(s)	375, 624
BspANI	GGCC	3 cut(s)	819, 1726, 1900
BspCNI	CTCAG	8 cut(s)	137, 174, 252, 288, 375, 772, 1579, 1887
BspEI	TCCGGA	1 cut(s)	464
BspFNI	CGCG	2 cut(s)	675, 1329
BspHI	TCATGA	1 cut(s)	346
BspLI	GGNNCC	5 cut(s)	652, 1279, 1725, 1801, 1880
BspMAI	CTGCAG	3 cut(s)	1297, 1564, 1861
BspMI	ACCTGC	2 cut(s)	270, 566
BspOI	GCTAGC	1 cut(s)	1785
BspPI	GGATC	2 cut(s)	721, 1263
BspT104I	TTCGAA	1 cut(s)	1736
BspT107I	GGYRCC	1 cut(s)	1277
BspTI	CTTAAG	1 cut(s)	1037
BspTNI	GGTCTC	1 cut(s)	1943
BsrDI	GCAATG	2 cut(s)	237, 1446
BsrFI	RCCGGY	1 cut(s)	1119
BsrI	ACTGG	5 cut(s)	68, 450, 910, 1049, 1541
BssAI	RCCGGY	1 cut(s)	1119
BssECI	CCNNGG	9 cut(s)	375, 478, 624, 673, 709, 740, 1186, 1327, 1428
BssMI	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
BssT1I	CCWWGG	5 cut(s)	375, 478, 624, 740, 1428
Bst2UI	CCWGG	4 cut(s)	571, 711, 1876, 1942
Bst4CI	ACNGT	5 cut(s)	50, 720, 876, 1551, 1583
Bst6I	CTCTTC	2 cut(s)	791, 1095
BstAFI	CTTAAG	1 cut(s)	1037
BstBI	TTCGAA	1 cut(s)	1736
BstC8I	GCNNGC	6 cut(s)	1121, 1224, 1458, 1624, 1783, 1902
BstDEI	CTNAG	9 cut(s)	124, 161, 239, 275, 383, 516, 759, 1566, 1895
BstDSI	CCRYGG	4 cut(s)	375, 624, 673, 1327
BstEII	GGTNACC	1 cut(s)	1342
BstF5I	GGATG	3 cut(s)	308, 809, 1711
BstFNI	CGCG	2 cut(s)	675, 1329
BstH2I	RGCGCY	1 cut(s)	1457
BstHHI	GCGC	4 cut(s)	1138, 1334, 1425, 1456
BstKTI	GATC	6 cut(s)	19, 716, 750, 1027, 1258, 1603
BstMAI	GTCTC	3 cut(s)	693, 1923, 1943
BstMBI	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
BstMCI	CGRYCG	1 cut(s)	1614
BstMWI	GCNNNNNNNGC	7 cut(s)	147, 258, 393, 672, 1016, 1298, 1457
BstNI	CCWGG	4 cut(s)	571, 711, 1876, 1942
BstNSI	RCATGY	1 cut(s)	1810
BstPI	GGTNACC	1 cut(s)	1342
BstSCI	CCNGG	4 cut(s)	569, 709, 1874, 1940
BstSFI	CTRYAG	4 cut(s)	1293, 1560, 1627, 1857
BstSLI	GKGCMC	1 cut(s)	1686
BstUI	CGCG	2 cut(s)	675, 1329
BstX2I	RGATCY	2 cut(s)	747, 1255
BstYI	RGATCY	2 cut(s)	747, 1255
Bsu36I	CCTNAGG	1 cut(s)	239
BsuRI	GGCC	3 cut(s)	819, 1726, 1900
BtgI	CCRYGG	4 cut(s)	375, 624, 673, 1327
BtsCI	GGATG	3 cut(s)	308, 809, 1711
BtsI	GCAGTG	2 cut(s)	780, 1162
BtsIMutI	CAGTG	3 cut(s)	780, 1162, 1547
BveI	ACCTGC	2 cut(s)	270, 566
Cac8I	GCNNGC	6 cut(s)	1121, 1224, 1458, 1624, 1783, 1902
CaiI	CAGNNNCTG	1 cut(s)	1865
CciI	TCATGA	1 cut(s)	346
CfoI	GCGC	4 cut(s)	1138, 1334, 1425, 1456
Cfr10I	RCCGGY	1 cut(s)	1119
Cfr13I	GGNCC	2 cut(s)	651, 1724
Cfr42I	CCGCGG	2 cut(s)	676, 1330
Csp6I	GTAC	4 cut(s)	577, 1042, 1183, 1552
CviQI	GTAC	4 cut(s)	577, 1042, 1183, 1552
DdeI	CTNAG	9 cut(s)	124, 161, 239, 275, 383, 516, 759, 1566, 1895
DpnI	GATC	6 cut(s)	18, 715, 749, 1026, 1257, 1602
DpnII	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
DriI	GACNNNNNGTC	1 cut(s)	685
EaeI	YGGCCR	1 cut(s)	817
Eam1104I	CTCTTC	2 cut(s)	791, 1095
Eam1105I	GACNNNNNGTC	1 cut(s)	685
EarI	CTCTTC	2 cut(s)	791, 1095
Eco130I	CCWWGG	5 cut(s)	375, 478, 624, 740, 1428
Eco147I	AGGCCT	1 cut(s)	1900
Eco24I	GRGCYC	3 cut(s)	177, 710, 1802
Eco31I	GGTCTC	1 cut(s)	1943
Eco47I	GGWCC	1 cut(s)	651
Eco81I	CCTNAGG	1 cut(s)	239
Eco91I	GGTNACC	1 cut(s)	1342
EcoO109I	RGGNCCY	1 cut(s)	1724
EcoO65I	GGTNACC	1 cut(s)	1342
EcoRII	CCWGG	4 cut(s)	569, 709, 1874, 1940
EcoT14I	CCWWGG	5 cut(s)	375, 478, 624, 740, 1428
EcoT38I	GRGCYC	3 cut(s)	177, 710, 1802
ErhI	CCWWGG	5 cut(s)	375, 478, 624, 740, 1428
FalI	AAGNNNNNCTT	2 cut(s)	966, 998
FaqI	GGGAC	1 cut(s)	944
FauNDI	CATATG	1 cut(s)	1021
FbaI	TGATCA	2 cut(s)	16, 1600
FokI	GGATG	3 cut(s)	295, 816, 1718
FriOI	GRGCYC	3 cut(s)	177, 710, 1802
FspBI	CTAG	8 cut(s)	320, 1014, 1227, 1419, 1532, 1716, 1782, 1954
FspI	TGCGCA	1 cut(s)	1137
GlaI	GCGC	4 cut(s)	1137, 1333, 1424, 1455
GsaI	CCCAGC	2 cut(s)	565, 1248
GsuI	CTGGAG	2 cut(s)	617, 1756
HaeII	RGCGCY	1 cut(s)	1457
HaeIII	GGCC	3 cut(s)	819, 1726, 1900
HapII	CCGG	3 cut(s)	465, 1120, 1407
HhaI	GCGC	4 cut(s)	1138, 1334, 1425, 1456
Hin6I	GCGC	4 cut(s)	1136, 1332, 1423, 1454
HinP1I	GCGC	4 cut(s)	1136, 1332, 1423, 1454
HincII	GTYRAC	2 cut(s)	205, 1056
HindII	GTYRAC	2 cut(s)	205, 1056
HindIII	AAGCTT	1 cut(s)	812
HinfI	GANTC	5 cut(s)	427, 483, 532, 1676, 1738
HpaI	GTTAAC	1 cut(s)	205
HpaII	CCGG	3 cut(s)	465, 1120, 1407
HphI	GGTGA	4 cut(s)	422, 1196, 1336, 1765
Hpy166II	GTNNAC	5 cut(s)	205, 835, 903, 1056, 1684
Hpy188I	TCNGA	5 cut(s)	247, 384, 762, 1605, 1695
Hpy188III	TCNNGA	5 cut(s)	347, 465, 596, 1167, 1773
Hpy8I	GTNNAC	5 cut(s)	205, 835, 903, 1056, 1684
HpyAV	CCTTC	4 cut(s)	940, 944, 963, 1140
HpyCH4III	ACNGT	5 cut(s)	50, 720, 876, 1551, 1583
HpyCH4IV	ACGT	2 cut(s)	695, 1371
HpyF10VI	GCNNNNNNNGC	7 cut(s)	147, 258, 393, 672, 1016, 1298, 1457
HpyF3I	CTNAG	9 cut(s)	124, 161, 239, 275, 383, 516, 759, 1566, 1895
HpySE526I	ACGT	2 cut(s)	695, 1371
HspAI	GCGC	4 cut(s)	1136, 1332, 1423, 1454
Kpn2I	TCCGGA	1 cut(s)	464
KroI	GCCGGC	1 cut(s)	1119
KroNI	GCCGGC	1 cut(s)	1121
Ksp22I	TGATCA	2 cut(s)	16, 1600
KspAI	GTTAAC	1 cut(s)	205
KspI	CCGCGG	2 cut(s)	676, 1330
Kzo9I	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
LmnI	GCTCC	7 cut(s)	338, 598, 742, 1172, 1775, 1805, 1877
LweI	GCATC	4 cut(s)	270, 288, 1147, 1841
MaeI	CTAG	8 cut(s)	320, 1014, 1227, 1419, 1532, 1716, 1782, 1954
MaeII	ACGT	2 cut(s)	695, 1371
MaeIII	GTNAC	9 cut(s)	44, 50, 282, 619, 730, 886, 1192, 1342, 1753
MalI	GATC	6 cut(s)	18, 715, 749, 1026, 1257, 1602
MboI	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
MboII	GAAGA	7 cut(s)	105, 518, 808, 921, 1112, 1120, 1552
MfeI	CAATTG	1 cut(s)	1922
MflI	RGATCY	2 cut(s)	747, 1255
MhlI	GDGCHC	5 cut(s)	177, 603, 710, 1686, 1802
MlsI	TGGCCA	1 cut(s)	819
MluCI	AATT	2 cut(s)	1081, 1922
MluNI	TGGCCA	1 cut(s)	819
MlyI	GAGTC	2 cut(s)	477, 526
MmeI	TCCRAC	4 cut(s)	172, 1056, 1827, 1874
Mox20I	TGGCCA	1 cut(s)	819
MroI	TCCGGA	1 cut(s)	464
MroNI	GCCGGC	1 cut(s)	1119
MscI	TGGCCA	1 cut(s)	819
MseI	TTAA	3 cut(s)	204, 657, 1038
MslI	CAYNNNNRTG	6 cut(s)	95, 351, 925, 1209, 1430, 1913
Msp20I	TGGCCA	1 cut(s)	819
MspA1I	CMGCKG	6 cut(s)	675, 726, 939, 1329, 1865, 1894
MspCI	CTTAAG	1 cut(s)	1037
MspI	CCGG	3 cut(s)	465, 1120, 1407
MspR9I	CCNGG	4 cut(s)	571, 711, 1876, 1942
MunI	CAATTG	1 cut(s)	1922
MvaI	CCWGG	4 cut(s)	571, 711, 1876, 1942
MvnI	CGCG	2 cut(s)	675, 1329
MwoI	GCNNNNNNNGC	7 cut(s)	147, 258, 393, 672, 1016, 1298, 1457
NaeI	GCCGGC	1 cut(s)	1121
NcoI	CCATGG	2 cut(s)	375, 624
NdeI	CATATG	1 cut(s)	1021
NdeII	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
NgoMIV	GCCGGC	1 cut(s)	1119
NheI	GCTAGC	1 cut(s)	1781
NlaIV	GGNNCC	5 cut(s)	652, 1279, 1725, 1801, 1880
NmuCI	GTSAC	6 cut(s)	282, 730, 886, 1192, 1342, 1753
NsbI	TGCGCA	1 cut(s)	1137
NspI	RCATGY	1 cut(s)	1810
NspV	TTCGAA	1 cut(s)	1736
OliI	CACNNNNGTG	2 cut(s)	925, 1430
PagI	TCATGA	1 cut(s)	346
PceI	AGGCCT	1 cut(s)	1900
PdiI	GCCGGC	1 cut(s)	1121
PfeI	GAWTC	3 cut(s)	427, 1676, 1738
PleI	GAGTC	2 cut(s)	477, 526
PpsI	GAGTC	2 cut(s)	477, 526
PshBI	ATTAAT	1 cut(s)	657
Psp1406I	AACGTT	1 cut(s)	695
Psp6I	CCWGG	4 cut(s)	569, 709, 1874, 1940
PspEI	GGTNACC	1 cut(s)	1342
PspFI	CCCAGC	2 cut(s)	561, 1244
PspGI	CCWGG	4 cut(s)	569, 709, 1874, 1940
PspN4I	GGNNCC	5 cut(s)	652, 1279, 1725, 1801, 1880
PspPI	GGNCC	2 cut(s)	651, 1724
PstI	CTGCAG	3 cut(s)	1297, 1564, 1861
PstNI	CAGNNNCTG	1 cut(s)	1865
PsuI	RGATCY	2 cut(s)	747, 1255
PvuII	CAGCTG	4 cut(s)	726, 939, 1865, 1894
RsaI	GTAC	4 cut(s)	578, 1043, 1184, 1553
RsaNI	GTAC	4 cut(s)	577, 1042, 1183, 1552
RseI	CAYNNNNRTG	6 cut(s)	95, 351, 925, 1209, 1430, 1913
SacII	CCGCGG	2 cut(s)	676, 1330
SaqAI	TTAA	3 cut(s)	204, 657, 1038
Sau3AI	GATC	6 cut(s)	16, 713, 747, 1024, 1255, 1600
Sau96I	GGNCC	2 cut(s)	651, 1724
ScaI	AGTACT	2 cut(s)	578, 1043
SchI	GAGTC	2 cut(s)	477, 526
ScrFI	CCNGG	4 cut(s)	571, 711, 1876, 1942
SduI	GDGCHC	5 cut(s)	177, 603, 710, 1686, 1802
SfaNI	GCATC	4 cut(s)	270, 288, 1147, 1841
SfcI	CTRYAG	4 cut(s)	1293, 1560, 1627, 1857
Sfr303I	CCGCGG	2 cut(s)	676, 1330
SfuI	TTCGAA	1 cut(s)	1736
SgrBI	CCGCGG	2 cut(s)	676, 1330
SinI	GGWCC	1 cut(s)	651
SmiMI	CAYNNNNRTG	6 cut(s)	95, 351, 925, 1209, 1430, 1913
SmlI	CTYRAG	2 cut(s)	1037, 1687
SmoI	CTYRAG	2 cut(s)	1037, 1687
Sse9I	AATT	2 cut(s)	1081, 1922
SseBI	AGGCCT	1 cut(s)	1900
SspMI	CTAG	8 cut(s)	320, 1014, 1227, 1419, 1532, 1716, 1782, 1954
StuI	AGGCCT	1 cut(s)	1900
StyD4I	CCNGG	4 cut(s)	569, 709, 1874, 1940
StyI	CCWWGG	5 cut(s)	375, 478, 624, 740, 1428
TaaI	ACNGT	5 cut(s)	50, 720, 876, 1551, 1583
TaiI	ACGT	2 cut(s)	698, 1374
TaqI	TCGA	3 cut(s)	1166, 1437, 1736
TaqII	GACCGA	1 cut(s)	1600
TasI	AATT	2 cut(s)	1081, 1922
TatI	WGTACW	2 cut(s)	576, 1041
TauI	GCSGC	5 cut(s)	666, 678, 1091, 1332, 1907
TfiI	GAWTC	3 cut(s)	427, 1676, 1738
Tru1I	TTAA	3 cut(s)	204, 657, 1038
Tru9I	TTAA	3 cut(s)	204, 657, 1038
TscAI	CASTG	3 cut(s)	780, 1162, 1554
TseFI	GTSAC	6 cut(s)	282, 730, 886, 1192, 1342, 1753
Tsp45I	GTSAC	6 cut(s)	282, 730, 886, 1192, 1342, 1753
TspDTI	ATGAA	7 cut(s)	17, 26, 107, 626, 683, 1121, 1722
TspGWI	ACGGA	3 cut(s)	1062, 1669, 1731
TspRI	CASTG	3 cut(s)	780, 1162, 1554
Vha464I	CTTAAG	1 cut(s)	1037
VneI	GTGCAC	1 cut(s)	1682
VpaK11BI	GGWCC	1 cut(s)	651
VspI	ATTAAT	1 cut(s)	657
XceI	RCATGY	1 cut(s)	1810
XspI	CTAG	8 cut(s)	320, 1014, 1227, 1419, 1532, 1716, 1782, 1954
ZrmI	AGTACT	2 cut(s)	578, 1043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.