Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002252

Physical Location & Seq

Genomic Coordinates Reverse (-)

72311348 .. 72314909

Gene Structure 3562 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00134780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGAAATCCATGAGTAATGATAACACCAACAGTAGCAATAACTGGTTGGATTTTTCTCTCTCCCCTAATATGAAAATGGATGTTCCTCCTCCTCCTTCAGACCCTCACCACCAAATTTCTCAGTCCTCTTCTCCTTCCATTCCAAATGCCTTTTTCAACTCCCCACCTCACTTTAACTATGGAATATACTATGGAGTTGATCAAGGAGATCACACTGGCTTGTACTCTGCTTTGCCCATGATGCCAATAAAGTCTGATGGTTCTCTTTGCATAATGGAAGCTCTCAACAGGTCTCATCATCCTCAAGGAATGGGAACTAGTAGTTCAAGTTCAACTCCAAAACTAGAGGACTTCTTTGGTGGTGCAACCATGGGGACCCATAACCACTATGACAACAATGACAGAGAAGCTCTAAGCTTAGACAGCATGTTTTACCAACAAATCCCAGCCCATCATCATCACCATGAGCCCAACAACAACAGCCAAAACTTGCTCAACCAAGAACATGAGTCCCAACAGCAACATTTCTCATCCTACTACTCTGGCCTAAAAACCCATGAAATGATGTTTGAGGATCATCAGAAGCAGCAAGCCCAGATTGAGCATTACAACAATGTCCAAAACCCAAGTTTGGGGTCACTTAATCACAGCATTTCTGATATGAAGAACTGGGTTCCCAGAAATTTCTCAGCTAATAATAATCAAGGGGTGTTGGAGCAGAACATGATTGGGTGCATGGGTGACAATGGTGCCGAATCTGCAGGGTCTATTGGGTCAATGCCTTACGGGGATTTACAGTGTTTGAGCTTGTCAATGAGCCCTGGCTCTCAATCAAGCTGTGTTACTGGTTCACAGCAAATCTCACCCACTTTGACTACTAATACGGATTGTGTAGTCGCCATGGATTCTTCCAAGAAAAGAGGGCCTGAAAAAGTGGAGCAAAAGCAAATTGTTCATAGGAAGTCTCTGGATACATTTGGGCAGAGAACTTCTCAGTATAGAGGAGTCACAAGGCATAGATGGACTGGTAGATATGAAGCTCATTTATGGGACAACAGCTGCAAGAAAGAAGGTCAGAGCAGGAAAGGAAGACAAGGGGGTTATGATATGGAACAAAAAGCTGCAAGAGCCTATGATCTAGCAGCTCTTAAGTATTGGGGACCATCTACTCACATCAATTTCCCATTGGAAAATTACCAAAAAGAGCTCGAGGAAATGAAGAACATGAGTAGACAAGAATATGTTGCTCACTTAAGAAGGAAAAGCAGTGGATTCTCAAGGGGGGCATCAATGTACAGAGGAGTGACAAGACATCATCAACATGGAAGATGGCAAGCTCGGATTGGAAGGGTTGCTGGGAATAAGGATCTTTACCTTGGGACATTCAGCACACAAGAGGAAGCTGCTGAGGCTTATGACATTGCGGCCATAAAATTTCGAGGACTGAATGCTGTGACCAACTTTGACATAACAAGGTACGATGTGGATCGAATCATGGCAAGCAATACCCTTCTTGCCGGAGACAATGCCAAGCGAAACAAGGCGCTGCCTCGACCAAGTGATGAGGCTACTAACCAAATCAGCAATGGTGAACAAAGCATTACTGTCGCAGTTAAGGACACCAATGAAGTTGAGGAATGGAAAATGATGCAGCTCTTTCAGTCTTCCCAGCAAGTAGTTGATCATCAAAATGTGATTCAAGCAGATCATCGAGCAGAAGAATCCACAACAATGGGGACAACTACTCACTTGTCTAACACCTCTTCGTTGGTGACAAGCTTGAGCAGCTCAAGAGAAGGCAGCCCTGACAAGTCAAGCCAACCAAGTTTCTTTGGAATGCCTCCAACTGCTTCTAAGTTCTTCTCAAGTTCCGGTACTAATAATACGGTCAGTTCTTGGATCCCAGCAGTCCAAACCAGGCCAGGTCTATCCCTCCCTCACATGCCGATTTTTGCTGCCTGGACTGATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010492 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0043436 GO:0043565 GO:0044237 GO:0044281 GO:0048507 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0098727 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

657

Amino Acids

73.27

Weight (kDa)

6.52

Isoelectric Point (pI)

49.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	332 - 387	1.1e-07	AP2 domain
AP2	PF00847	432 - 481	9.5e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37750
fragaria_vesca	FvH4_1g18270 FvH4_1g18270 FvH4_2g32640 FvH4_2g32640
malus_domestica	MD02G1190000.v1.1 MD08G1077100.v1.1 MD15G1064600.v1.1 MD15G1301100.v1.1
prunus_persica	Prupe.1G418600_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1
pyrus_communis	pycom02g15390 pycom02g15400 pycom08g06410 pycom15g06140 pycom15g26370
rosa_chinensis	RchiOBHm_Chr2g0108831 RchiOBHm_Chr6g0310091
rosa_laevigata	RLG00000010512 RLG00000017692
rosa_multiflora	Rmu_sc0000294.1_g000022 Rmu_sc0003973.1_g000013
rosa_roxburghii	Rroxscaffold_2G00134780 Rroxscaffold_7G00158880
rosa_rugosa	Rorug02G0156300 Rorug02G0156400 Rorug06G0377300 Rorug06G0377300
rosa_samantha	Rh2AG206600 Rh2AG206700 Rh2BG217800 Rh2CG209800 Rh2DG213000 Rh6AG491300 Rh6BG500600 Rh6CG505500 Rh6CG505600 Rh6DG491500 Rh6DG491600
rosa_wichuraiana	Rw2G016430 Rw6G042740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	749
AccI	GTMKAC	1 cut(s)	1231
AciI	CCGC	1 cut(s)	1424
AclWI	GGATC	5 cut(s)	582, 1374, 1494, 1894, 1907
AcoI	YGGCCR	1 cut(s)	1425
AcsI	RAATTY	3 cut(s)	114, 682, 1433
AcuI	CTGAAG	1 cut(s)	81
AfaI	GTAC	4 cut(s)	224, 1295, 1478, 1876
AfiI	CCNNNNNNNGG	2 cut(s)	631, 632
AflII	CTTAAG	2 cut(s)	1148, 1252
AgsI	TTSAA	4 cut(s)	157, 327, 333, 1700
AhlI	ACTAGT	1 cut(s)	317
AjnI	CCWGG	4 cut(s)	820, 1916, 1921, 1958
Alw21I	GWGCWC	1 cut(s)	1209
Alw26I	GTCTC	3 cut(s)	297, 969, 1515
AlwI	GGATC	5 cut(s)	582, 1374, 1494, 1894, 1907
Ama87I	CYCGRG	1 cut(s)	1208
AoxI	GGCC	4 cut(s)	544, 923, 1425, 1919
ApoI	RAATTY	3 cut(s)	114, 682, 1433
AspLEI	GCGC	1 cut(s)	1546
AspS9I	GGNCC	3 cut(s)	375, 923, 1160
AsuHPI	GGTGA	6 cut(s)	98, 452, 752, 855, 1601, 1783
AvaI	CYCGRG	1 cut(s)	1208
AvaII	GGWCC	2 cut(s)	375, 1160
BamHI	GGATCC	1 cut(s)	1899
BanI	GGYRCC	1 cut(s)	749
BanII	GRGCYC	3 cut(s)	471, 821, 1209
BbsI	GAAGAC	2 cut(s)	1096, 1656
Bbv12I	GWGCWC	1 cut(s)	1209
BbvCI	CCTCAGC	1 cut(s)	1407
BccI	CCATC	5 cut(s)	251, 459, 1014, 1171, 1323
BcgI	CGANNNNNNTGC	2 cut(s)	1588, 1622
BciT130I	CCWGG	4 cut(s)	822, 1918, 1923, 1960
BciVI	GTATCC	1 cut(s)	964
BclI	TGATCA	2 cut(s)	199, 1681
BcoDI	GTCTC	3 cut(s)	297, 969, 1515
BcuI	ACTAGT	1 cut(s)	317
BfaI	CTAG	3 cut(s)	318, 344, 1139
BfmI	CTRYAG	1 cut(s)	759
BfoI	RGCGCY	1 cut(s)	1547
BfrI	CTTAAG	2 cut(s)	1148, 1252
BfuI	GTATCC	1 cut(s)	964
Bme1390I	CCNGG	4 cut(s)	822, 1918, 1923, 1960
Bme18I	GGWCC	2 cut(s)	375, 1160
BmeT110I	CYCGRG	1 cut(s)	1208
BmgT120I	GGNCC	3 cut(s)	375, 923, 1160
BmiI	GGNNCC	6 cut(s)	376, 377, 675, 751, 1161, 1901
BmrFI	CCNGG	4 cut(s)	822, 1918, 1923, 1960
BmrI	ACTGGG	1 cut(s)	679
BmsI	GCATC	4 cut(s)	231, 1295, 1638, 1957
BmuI	ACTGGG	1 cut(s)	679
BpiI	GAAGAC	2 cut(s)	1096, 1656
BplI	GAGNNNNNCTC	2 cut(s)	976, 1008
Bpu10I	CCTNAGC	1 cut(s)	1407
BpuEI	CTTGAG	5 cut(s)	288, 1261, 1774, 1801, 1849
BsaBI	GATNNNNATC	1 cut(s)	1485
BsaI	GGTCTC	1 cut(s)	297
BsaJI	CCNNGG	4 cut(s)	369, 820, 900, 1375
BsaWI	WCCGGW	1 cut(s)	1871
Bsc4I	CCNNNNNNNGG	2 cut(s)	631, 632
Bse1I	ACTGG	5 cut(s)	47, 220, 674, 850, 1030
Bse3DI	GCAATG	2 cut(s)	1419, 1591
Bse8I	GATNNNNATC	1 cut(s)	1485
BseBI	CCWGG	4 cut(s)	822, 1918, 1923, 1960
BseDI	CCNNGG	4 cut(s)	369, 820, 900, 1375
BseGI	GGATG	3 cut(s)	85, 298, 530
BseJI	GATNNNNATC	1 cut(s)	1485
BseLI	CCNNNNNNNGG	2 cut(s)	631, 632
BseMI	GCAATG	2 cut(s)	1419, 1591
BseMII	CTCAG	4 cut(s)	134, 702, 1007, 1398
BseNI	ACTGG	5 cut(s)	47, 220, 674, 850, 1030
BseRI	GAGGAG	4 cut(s)	78, 81, 1017, 1314
BseYI	CCCAGC	4 cut(s)	445, 1355, 1668, 1903
BshFI	GGCC	4 cut(s)	546, 925, 1427, 1921
BshNI	GGYRCC	1 cut(s)	749
BsiHKAI	GWGCWC	1 cut(s)	1209
BsiHKCI	CYCGRG	1 cut(s)	1208
BsiSI	CCGG	2 cut(s)	1518, 1872
BslFI	GGGAC	6 cut(s)	388, 496, 1064, 1173, 1393, 1750
BslI	CCNNNNNNNGG	2 cut(s)	631, 632
BsmAI	GTCTC	3 cut(s)	297, 969, 1515
BsmFI	GGGAC	6 cut(s)	388, 496, 1064, 1173, 1393, 1750
BsmI	GAATGC	2 cut(s)	1453, 1842
BsnI	GGCC	4 cut(s)	546, 925, 1427, 1921
Bso31I	GGTCTC	1 cut(s)	297
BsoBI	CYCGRG	1 cut(s)	1208
Bsp1286I	GDGCHC	3 cut(s)	471, 821, 1209
Bsp1407I	TGTACA	1 cut(s)	1293
Bsp143I	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
Bsp19I	CCATGG	2 cut(s)	369, 900
BspACI	CCGC	1 cut(s)	1424
BspANI	GGCC	4 cut(s)	546, 925, 1427, 1921
BspCNI	CTCAG	4 cut(s)	133, 701, 1006, 1399
BspLI	GGNNCC	6 cut(s)	376, 377, 675, 751, 1161, 1901
BspMAI	CTGCAG	1 cut(s)	763
BspPI	GGATC	5 cut(s)	582, 1374, 1494, 1894, 1907
BspT107I	GGYRCC	1 cut(s)	749
BspTI	CTTAAG	2 cut(s)	1148, 1252
BspTNI	GGTCTC	1 cut(s)	297
BsrDI	GCAATG	2 cut(s)	1419, 1591
BsrGI	TGTACA	1 cut(s)	1293
BsrI	ACTGG	5 cut(s)	47, 220, 674, 850, 1030
BssECI	CCNNGG	4 cut(s)	369, 820, 900, 1375
BssMI	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
BssT1I	CCWWGG	3 cut(s)	369, 900, 1375
Bst2UI	CCWGG	4 cut(s)	822, 1918, 1923, 1960
Bst4CI	ACNGT	4 cut(s)	32, 798, 1606, 1888
Bst6I	CTCTTC	2 cut(s)	133, 1768
BstAFI	CTTAAG	2 cut(s)	1148, 1252
BstAUI	TGTACA	1 cut(s)	1293
BstC8I	GCNNGC	3 cut(s)	591, 1335, 1501
BstDEI	CTNAG	7 cut(s)	120, 413, 418, 688, 993, 1407, 1854
BstDSI	CCRYGG	2 cut(s)	369, 900
BstF5I	GGATG	3 cut(s)	85, 298, 530
BstH2I	RGCGCY	1 cut(s)	1547
BstHHI	GCGC	1 cut(s)	1546
BstKTI	GATC	9 cut(s)	202, 211, 577, 1138, 1369, 1489, 1684, 1708, 1902
BstMAI	GTCTC	3 cut(s)	297, 969, 1515
BstMBI	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
BstMWI	GCNNNNNNNGC	6 cut(s)	241, 423, 758, 1127, 1409, 1785
BstNI	CCWGG	4 cut(s)	822, 1918, 1923, 1960
BstNSI	RCATGY	2 cut(s)	430, 1945
BstSCI	CCNGG	4 cut(s)	820, 1916, 1921, 1958
BstSFI	CTRYAG	1 cut(s)	759
BstV2I	GAAGAC	2 cut(s)	1096, 1656
BstX2I	RGATCY	2 cut(s)	1366, 1899
BstXI	CCANNNNNNTGG	1 cut(s)	1732
BstYI	RGATCY	2 cut(s)	1366, 1899
BsuI	GTATCC	1 cut(s)	964
BsuRI	GGCC	4 cut(s)	546, 925, 1427, 1921
BtgI	CCRYGG	2 cut(s)	369, 900
BtsCI	GGATG	3 cut(s)	85, 298, 530
BtsI	GCAGTG	1 cut(s)	1273
BtsIMutI	CAGTG	3 cut(s)	213, 803, 1273
Cac8I	GCNNGC	3 cut(s)	591, 1335, 1501
CfoI	GCGC	1 cut(s)	1546
Cfr13I	GGNCC	3 cut(s)	375, 923, 1160
Csp6I	GTAC	4 cut(s)	223, 1294, 1477, 1875
CviQI	GTAC	4 cut(s)	223, 1294, 1477, 1875
DdeI	CTNAG	7 cut(s)	120, 413, 418, 688, 993, 1407, 1854
DpnI	GATC	9 cut(s)	201, 210, 576, 1137, 1368, 1488, 1683, 1707, 1901
DpnII	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
EaeI	YGGCCR	1 cut(s)	1425
Eam1104I	CTCTTC	2 cut(s)	133, 1768
EarI	CTCTTC	2 cut(s)	133, 1768
Ecl136II	GAGCTC	1 cut(s)	1207
Eco130I	CCWWGG	3 cut(s)	369, 900, 1375
Eco24I	GRGCYC	3 cut(s)	471, 821, 1209
Eco31I	GGTCTC	1 cut(s)	297
Eco47I	GGWCC	2 cut(s)	375, 1160
Eco53kI	GAGCTC	1 cut(s)	1207
Eco57I	CTGAAG	1 cut(s)	81
Eco88I	CYCGRG	1 cut(s)	1208
EcoICRI	GAGCTC	1 cut(s)	1207
EcoO109I	RGGNCCY	2 cut(s)	375, 923
EcoRII	CCWGG	4 cut(s)	820, 1916, 1921, 1958
EcoT14I	CCWWGG	3 cut(s)	369, 900, 1375
EcoT38I	GRGCYC	3 cut(s)	471, 821, 1209
ErhI	CCWWGG	3 cut(s)	369, 900, 1375
FaqI	GGGAC	6 cut(s)	388, 496, 1064, 1173, 1393, 1750
FbaI	TGATCA	2 cut(s)	199, 1681
FblI	GTMKAC	1 cut(s)	1231
FokI	GGATG	3 cut(s)	92, 285, 517
FriOI	GRGCYC	3 cut(s)	471, 821, 1209
FspBI	CTAG	3 cut(s)	318, 344, 1139
GlaI	GCGC	1 cut(s)	1545
GsaI	CCCAGC	4 cut(s)	449, 1359, 1672, 1907
HaeII	RGCGCY	1 cut(s)	1547
HaeIII	GGCC	4 cut(s)	546, 925, 1427, 1921
HapII	CCGG	2 cut(s)	1518, 1872
HhaI	GCGC	1 cut(s)	1546
Hin6I	GCGC	1 cut(s)	1544
HinP1I	GCGC	1 cut(s)	1544
HindIII	AAGCTT	2 cut(s)	415, 1777
HinfI	GANTC	8 cut(s)	509, 755, 905, 1005, 1272, 1491, 1696, 1721
HpaII	CCGG	2 cut(s)	1518, 1872
HphI	GGTGA	6 cut(s)	98, 452, 752, 855, 1601, 1783
Hpy166II	GTNNAC	3 cut(s)	851, 1232, 1592
Hpy188I	TCNGA	6 cut(s)	100, 256, 582, 658, 1077, 1341
Hpy188III	TCNNGA	2 cut(s)	968, 1791
Hpy8I	GTNNAC	3 cut(s)	851, 1232, 1592
HpyAV	CCTTC	7 cut(s)	105, 144, 1064, 1251, 1341, 1520, 1790
HpyCH4III	ACNGT	4 cut(s)	32, 798, 1606, 1888
HpyCH4V	TGCA	7 cut(s)	270, 365, 735, 761, 1062, 1124, 1651
HpyF10VI	GCNNNNNNNGC	6 cut(s)	241, 423, 758, 1127, 1409, 1785
HpyF3I	CTNAG	7 cut(s)	120, 413, 418, 688, 993, 1407, 1854
HspAI	GCGC	1 cut(s)	1544
KflI	GGGWCCC	1 cut(s)	375
Ksp22I	TGATCA	2 cut(s)	199, 1681
Kzo9I	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
LmnI	GCTCC	2 cut(s)	715, 937
LweI	GCATC	4 cut(s)	231, 1295, 1638, 1957
MaeI	CTAG	3 cut(s)	318, 344, 1139
MaeIII	GTNAC	7 cut(s)	636, 740, 841, 1006, 1303, 1453, 1771
MalI	GATC	9 cut(s)	201, 210, 576, 1137, 1368, 1488, 1683, 1707, 1901
MboI	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
MflI	RGATCY	2 cut(s)	1366, 1899
MhlI	GDGCHC	3 cut(s)	471, 821, 1209
MluCI	AATT	6 cut(s)	114, 682, 948, 1177, 1192, 1433
MlyI	GAGTC	2 cut(s)	518, 1014
MmeI	TCCRAC	3 cut(s)	27, 693, 1868
MseI	TTAA	5 cut(s)	174, 642, 1149, 1253, 1614
MslI	CAYNNNNRTG	4 cut(s)	462, 1320, 1689, 1730
MspA1I	CMGCKG	1 cut(s)	1059
MspCI	CTTAAG	2 cut(s)	1148, 1252
MspI	CCGG	2 cut(s)	1518, 1872
MspR9I	CCNGG	4 cut(s)	822, 1918, 1923, 1960
Mva1269I	GAATGC	2 cut(s)	1453, 1842
MvaI	CCWGG	4 cut(s)	822, 1918, 1923, 1960
MwoI	GCNNNNNNNGC	6 cut(s)	241, 423, 758, 1127, 1409, 1785
NcoI	CCATGG	2 cut(s)	369, 900
NdeII	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
NlaIV	GGNNCC	6 cut(s)	376, 377, 675, 751, 1161, 1901
NmuCI	GTSAC	6 cut(s)	636, 740, 1006, 1303, 1453, 1771
NspI	RCATGY	2 cut(s)	430, 1945
PaeR7I	CTCGAG	1 cut(s)	1208
PctI	GAATGC	2 cut(s)	1453, 1842
PfeI	GAWTC	6 cut(s)	755, 905, 1272, 1491, 1696, 1721
PleI	GAGTC	2 cut(s)	517, 1013
PpsI	GAGTC	2 cut(s)	517, 1013
PpuMI	RGGWCCY	1 cut(s)	375
Psp124BI	GAGCTC	1 cut(s)	1209
Psp5II	RGGWCCY	1 cut(s)	375
Psp6I	CCWGG	4 cut(s)	820, 1916, 1921, 1958
PspFI	CCCAGC	4 cut(s)	445, 1355, 1668, 1903
PspGI	CCWGG	4 cut(s)	820, 1916, 1921, 1958
PspN4I	GGNNCC	6 cut(s)	376, 377, 675, 751, 1161, 1901
PspPI	GGNCC	3 cut(s)	375, 923, 1160
PspPPI	RGGWCCY	1 cut(s)	375
PspXI	VCTCGAGB	1 cut(s)	1208
PsrI	GAACNNNNNNTAC	2 cut(s)	313, 345
PstI	CTGCAG	1 cut(s)	763
PsuI	RGATCY	2 cut(s)	1366, 1899
PvuII	CAGCTG	1 cut(s)	1059
RsaI	GTAC	4 cut(s)	224, 1295, 1478, 1876
RsaNI	GTAC	4 cut(s)	223, 1294, 1477, 1875
RseI	CAYNNNNRTG	4 cut(s)	462, 1320, 1689, 1730
SacI	GAGCTC	1 cut(s)	1209
SaqAI	TTAA	5 cut(s)	174, 642, 1149, 1253, 1614
Sau3AI	GATC	9 cut(s)	199, 208, 574, 1135, 1366, 1486, 1681, 1705, 1899
Sau96I	GGNCC	3 cut(s)	375, 923, 1160
SchI	GAGTC	2 cut(s)	518, 1014
ScrFI	CCNGG	4 cut(s)	822, 1918, 1923, 1960
SduI	GDGCHC	3 cut(s)	471, 821, 1209
SfaNI	GCATC	4 cut(s)	231, 1295, 1638, 1957
SfcI	CTRYAG	1 cut(s)	759
Sfr274I	CTCGAG	1 cut(s)	1208
SinI	GGWCC	2 cut(s)	375, 1160
SlaI	CTCGAG	1 cut(s)	1208
SmiMI	CAYNNNNRTG	4 cut(s)	462, 1320, 1689, 1730
SmlI	CTYRAG	8 cut(s)	303, 1148, 1208, 1252, 1276, 1780, 1789, 1864
SmoI	CTYRAG	8 cut(s)	303, 1148, 1208, 1252, 1276, 1780, 1789, 1864
SpeI	ACTAGT	1 cut(s)	317
Sse9I	AATT	6 cut(s)	114, 682, 948, 1177, 1192, 1433
SsiI	CCGC	1 cut(s)	1424
SspMI	CTAG	3 cut(s)	318, 344, 1139
SstI	GAGCTC	1 cut(s)	1209
StyD4I	CCNGG	4 cut(s)	820, 1916, 1921, 1958
StyI	CCWWGG	3 cut(s)	369, 900, 1375
TaaI	ACNGT	4 cut(s)	32, 798, 1606, 1888
TaqI	TCGA	5 cut(s)	1209, 1438, 1489, 1552, 1711
TasI	AATT	6 cut(s)	114, 682, 948, 1177, 1192, 1433
TatI	WGTACW	2 cut(s)	222, 1293
TauI	GCSGC	1 cut(s)	1427
TfiI	GAWTC	6 cut(s)	755, 905, 1272, 1491, 1696, 1721
Tru1I	TTAA	5 cut(s)	174, 642, 1149, 1253, 1614
Tru9I	TTAA	5 cut(s)	174, 642, 1149, 1253, 1614
TscAI	CASTG	3 cut(s)	220, 803, 1273
TseFI	GTSAC	6 cut(s)	636, 740, 1006, 1303, 1453, 1771
Tsp45I	GTSAC	6 cut(s)	636, 740, 1006, 1303, 1453, 1771
TspDTI	ATGAA	8 cut(s)	17, 86, 573, 677, 944, 1050, 1232, 1641
TspGWI	ACGGA	1 cut(s)	899
TspRI	CASTG	3 cut(s)	220, 803, 1273
Vha464I	CTTAAG	2 cut(s)	1148, 1252
VpaK11BI	GGWCC	2 cut(s)	375, 1160
XapI	RAATTY	3 cut(s)	114, 682, 1433
XceI	RCATGY	2 cut(s)	430, 1945
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1583
XhoI	CTCGAG	1 cut(s)	1208
XmiI	GTMKAC	1 cut(s)	1231
XspI	CTAG	3 cut(s)	318, 344, 1139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.