Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002252

Physical Location & Seq

Genomic Coordinates Reverse (-)

13926644 .. 13928518

Gene Structure 1875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0156300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGCAGTCTCCATCCTACGTTCATCAATAGTCTGTATTCTGCTACTGTTCTTCTTCACCACTCAAATTTTAGCCCAGCCAGTACCACAGTTGAACTCGACCACAAACTTTTCATGTGCAGTAGATGCACCATCTTCATGCGAAACATATATAACGTACTTTGCACGGTCTCCAGGGTATATGAACCTGGAAAACATATCTGATCTATTTGGGGTCAGTGTCTCATCAATTGCCAAGGCCAGTAATCTAGCTTCCAGTTACACAGGTCAGACCCGATTGGTTGCAGGCCAACTCTTACTAGTACCTATCACCTGTGGTTGCACTGAAAACCGGTCTTTTGCAAACATTACCTATCCGATCAAGAGTGGAGATAGCTACTATGTGGTTTCGATCAATACATTTGAGAATCTCACCAAATGGCAGTTAGTGCAAGAGATGAATCCAGCTCTGATTCCCACCCACTTGCAGATTGGTGACAAAGTGATTTTTCCTTTGTTCTGCAAATGTCCCTCGAAGACGAACTCAGATTTAATTCAGTATCTCATCACTTATGTCTGGCAGACTGATGATGACATCTTTAGAGTGGGTGCCAAGTTTAATGTTAAAGAATTTGAGATCTCAGACGCAAATAACCAGCGGGACTTCAGCAATTCAAGTGCAGTAGTGGGACAACCGGTGCTGATACCACTGACAGAGTTGCCTGCTCTATTCCAACCACTACCCCCTCATGGAAAACACAACTACAGGTTGATGCTTATTGTCATCATATGCTTGGGAGTTGCTCTATGTGTTGCTTCTCTTTTGGCAATTTTCGTGGTTTACACTCGTCGTCTGCACAAGAGACAGAAGCTTTTGAATGGTAAGAGTTTGTCTCTGGAAAGCGCTGAATGGTTCCGAATGAAAGAAGCAAAAAGTGAAGAGAAGATTGAGCTGAAGTTTGTACAGGACAAGCTTCTTCCTGGAGTTTCAAGCTATCTAGGAAAGGCAATCCTCTATGATATCAAAACAATTATGGAGGCAACCATGAATCTCAACGACCACCGTAGGATTGGAGGGTCTGTATACAGGGCTGTAATTGATGGGAAGGTCTTGGCTGTGAAGAAAACCAAGGAAGATGTCACTGAGGAACTAAATATCCTGCAGAAGGTAAATCATGCAAATCTGGTGAAACTTATGGGCATCTCATCTGAGATCGACGGGGATCGCTTCTTGGTTTATGAATATGCTGAAAATGGATCACTTGATAAATGGTTGCACTATAAATCTTCAACCGGTTCAAGTTCTGGGGCATTCCTCACATGGAGTCAGAGATTAAGCATAGCTCTACATGTTGCCAATGGCCTGCAATACATGCATGAACACACGCAACCGAGCATCGTTCACATGGATATAAGGACAAGTAACATACTTCTTGACTCCAAATACAAGGCCAAGATAGCAAACTTCTCCATGGCTAGAACTGCTGCAAACAGTGTTACACCAAAGGCGGATGTTTTCTCTTTCGGTGTTGTTCTGTTGTCTTTGCTTTCGGGCAAGAAAGGCATGGAAACAAAAGAGAATGGCGAGGTCATCATGTTGTGGAAGGATGTTAGGGGGGTTTTGGAAGCTGAAGAGAAAAAACAGGAGAGGTTGAGAGCATGGATGGATCCAACTTTGGAGAGTTTCTATCCCATTGATGGTGCTTTGAGCTTGACAGCCTTGGCAAGCGCATGCACACAGGAAAAGTCATCAGCAAGACCAAGCATGGCAGAAGTTGTCTTCAACCTCTCTGTTCTTACTCATTCATCGTCTGAGTCGACACTGGAGAGGCCTTGGAATTCTGCATTGGAAGCAGAAGAAGTTCTTCAAACTATCACTCCTATCAGAGCTCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010074 GO:0010468 GO:0010492 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0019827 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0043436 GO:0043565 GO:0044237 GO:0044281 GO:0048507 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0098727 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

624

Amino Acids

69.48

Weight (kDa)

7.92

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	46 - 108	4.6e-22	NFP/LYK LysM1 domain
LysM2_NFP	PF23457	112 - 166	7.1e-27	NFP LysM2 domain
LysM2_CERK1_LYK3_4_5	PF23472	114 - 165	2.8e-08	LYK3/4/5 LysM2 domain
LysM3_NFP	PF23462	180 - 229	1.5e-16	NFP LysM3 domain
Pkinase	PF00069	362 - 491	1.5e-20	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	367 - 489	1.8e-22	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G37750
fragaria_vesca	FvH4_1g18270 FvH4_1g18270 FvH4_2g32640 FvH4_2g32640
malus_domestica	MD02G1190000.v1.1 MD08G1077100.v1.1 MD15G1064600.v1.1 MD15G1301100.v1.1
prunus_persica	Prupe.1G418600_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1 Prupe.6G216400_v2.0.a1
pyrus_communis	pycom02g15390 pycom02g15400 pycom08g06410 pycom15g06140 pycom15g26370
rosa_chinensis	RchiOBHm_Chr2g0108831 RchiOBHm_Chr6g0310091
rosa_laevigata	RLG00000010512 RLG00000017692
rosa_multiflora	Rmu_sc0000294.1_g000022 Rmu_sc0003973.1_g000013
rosa_roxburghii	Rroxscaffold_2G00134780 Rroxscaffold_7G00158880
rosa_rugosa	Rorug02G0156300 Rorug02G0156400 Rorug06G0377300 Rorug06G0377300
rosa_samantha	Rh2AG206600 Rh2AG206700 Rh2BG217800 Rh2CG209800 Rh2DG213000 Rh6AG491300 Rh6BG500600 Rh6CG505500 Rh6CG505600 Rh6DG491500 Rh6DG491600
rosa_wichuraiana	Rw2G016430 Rw6G042740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	587
AccI	GTMKAC	2 cut(s)	1062, 1796
AciI	CCGC	2 cut(s)	637, 1487
AclWI	GGATC	4 cut(s)	1209, 1243, 1640, 1653
AcsI	RAATTY	3 cut(s)	66, 608, 1816
AcuI	CTGAAG	3 cut(s)	628, 953, 1629
AfaI	GTAC	4 cut(s)	84, 158, 303, 942
AfeI	AGCGCT	1 cut(s)	883
AfiI	CCNNNNNNNGG	3 cut(s)	728, 1144, 1676
AflIII	ACRYGT	1 cut(s)	1327
AgeI	ACCGGT	3 cut(s)	330, 673, 1271
AgsI	TTSAA	8 cut(s)	94, 654, 856, 969, 1269, 1278, 1762, 1847
AhlI	ACTAGT	1 cut(s)	298
AjnI	CCWGG	3 cut(s)	172, 186, 958
AjuI	GAANNNNNNNTTGG	2 cut(s)	1808, 1840
AloI	GAACNNNNNNTCC	2 cut(s)	1119, 1151
Alw21I	GWGCWC	1 cut(s)	1870
Alw26I	GTCTC	5 cut(s)	13, 174, 226, 835, 876
AlwI	GGATC	4 cut(s)	1209, 1243, 1640, 1653
Aor51HI	AGCGCT	1 cut(s)	883
AoxI	GGCC	5 cut(s)	237, 286, 1339, 1428, 1808
ApeKI	GCWGC	1 cut(s)	1463
ApoI	RAATTY	3 cut(s)	66, 608, 1816
AsiGI	ACCGGT	3 cut(s)	330, 673, 1271
Asp700I	GAANNNNTTC	2 cut(s)	1839, 1842
AspLEI	GCGC	2 cut(s)	884, 1709
AsuHPI	GGTGA	5 cut(s)	49, 301, 403, 485, 1177
BamHI	GGATCC	1 cut(s)	1645
BanI	GGYRCC	1 cut(s)	587
BanII	GRGCYC	1 cut(s)	1870
BarI	GAAGNNNNNNTAC	2 cut(s)	235, 267
BbsI	GAAGAC	2 cut(s)	521, 1750
Bbv12I	GWGCWC	1 cut(s)	1870
BbvI	GCAGC	1 cut(s)	1450
BccI	CCATC	5 cut(s)	20, 139, 1073, 1636, 1670
BciT130I	CCWGG	3 cut(s)	174, 188, 960
BcoDI	GTCTC	5 cut(s)	13, 174, 226, 835, 876
BcuI	ACTAGT	1 cut(s)	298
BfaI	CTAG	4 cut(s)	248, 299, 977, 1455
BfmI	CTRYAG	2 cut(s)	742, 1139
BfoI	RGCGCY	1 cut(s)	885
BglII	AGATCT	1 cut(s)	615
BisI	GCNGC	1 cut(s)	1464
BlsI	GCNGC	1 cut(s)	1465
Bme1390I	CCNGG	3 cut(s)	174, 188, 960
BmiI	GGNNCC	3 cut(s)	589, 893, 1647
BmrFI	CCNGG	3 cut(s)	174, 188, 960
BmsI	GCATC	4 cut(s)	115, 741, 1188, 1383
BpiI	GAAGAC	2 cut(s)	521, 1750
BplI	GAGNNNNNCTC	2 cut(s)	856, 888
BpmI	CTGGAG	3 cut(s)	156, 981, 1823
BsaI	GGTCTC	1 cut(s)	174
BsaJI	CCNNGG	6 cut(s)	173, 234, 1107, 1449, 1698, 1811
BsaWI	WCCGGW	3 cut(s)	330, 673, 1271
BsaXI	ACNNNNNCTCC	4 cut(s)	1044, 1074, 1840, 1870
Bsc4I	CCNNNNNNNGG	3 cut(s)	728, 1144, 1676
Bse118I	RCCGGY	3 cut(s)	330, 673, 1271
Bse1I	ACTGG	4 cut(s)	80, 240, 255, 1806
BseBI	CCWGG	3 cut(s)	174, 188, 960
BseDI	CCNNGG	6 cut(s)	173, 234, 1107, 1449, 1698, 1811
BseGI	GGATG	4 cut(s)	12, 1495, 1591, 1647
BseLI	CCNNNNNNNGG	3 cut(s)	728, 1144, 1676
BseMII	CTCAG	5 cut(s)	537, 633, 1113, 1179, 1782
BseNI	ACTGG	4 cut(s)	80, 240, 255, 1806
BseXI	GCAGC	1 cut(s)	1450
BseYI	CCCAGC	1 cut(s)	75
BsgI	GTGCAG	3 cut(s)	138, 678, 818
BshFI	GGCC	5 cut(s)	239, 288, 1341, 1430, 1810
BshNI	GGYRCC	1 cut(s)	587
BshTI	ACCGGT	3 cut(s)	330, 673, 1271
BsiHKAI	GWGCWC	1 cut(s)	1870
BsiSI	CCGG	3 cut(s)	331, 674, 1272
BslFI	GGGAC	3 cut(s)	492, 653, 681
BslI	CCNNNNNNNGG	3 cut(s)	728, 1144, 1676
BsmAI	GTCTC	5 cut(s)	13, 174, 226, 835, 876
BsmFI	GGGAC	3 cut(s)	492, 653, 681
BsmI	GAATGC	1 cut(s)	1289
BsnI	GGCC	5 cut(s)	239, 288, 1341, 1430, 1810
Bso31I	GGTCTC	1 cut(s)	174
Bsp1286I	GDGCHC	1 cut(s)	1870
Bsp1407I	TGTACA	1 cut(s)	940
Bsp143I	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
Bsp19I	CCATGG	1 cut(s)	1449
BspACI	CCGC	2 cut(s)	637, 1487
BspANI	GGCC	5 cut(s)	239, 288, 1341, 1430, 1810
BspCNI	CTCAG	5 cut(s)	536, 632, 1114, 1180, 1783
BspLI	GGNNCC	3 cut(s)	589, 893, 1647
BspMAI	CTGCAG	1 cut(s)	1143
BspPI	GGATC	4 cut(s)	1209, 1243, 1640, 1653
BspT107I	GGYRCC	1 cut(s)	587
BspTNI	GGTCTC	1 cut(s)	174
BsrFI	RCCGGY	3 cut(s)	330, 673, 1271
BsrGI	TGTACA	1 cut(s)	940
BsrI	ACTGG	4 cut(s)	80, 240, 255, 1806
BssAI	RCCGGY	3 cut(s)	330, 673, 1271
BssECI	CCNNGG	6 cut(s)	173, 234, 1107, 1449, 1698, 1811
BssMI	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
BssNAI	GTATAC	1 cut(s)	1063
BssT1I	CCWWGG	5 cut(s)	234, 1107, 1449, 1698, 1811
Bst1107I	GTATAC	1 cut(s)	1063
Bst2UI	CCWGG	3 cut(s)	174, 188, 960
Bst4CI	ACNGT	5 cut(s)	48, 90, 168, 1043, 1472
Bst6I	CTCTTC	2 cut(s)	912, 1605
BstAPI	GCANNNNNTGC	3 cut(s)	125, 427, 1351
BstAUI	TGTACA	1 cut(s)	940
BstC8I	GCNNGC	6 cut(s)	286, 702, 1343, 1705, 1711, 1870
BstDEI	CTNAG	5 cut(s)	523, 619, 1122, 1188, 1791
BstDSI	CCRYGG	1 cut(s)	1449
BstENI	CCTNNNNNAGG	1 cut(s)	1142
BstF5I	GGATG	4 cut(s)	12, 1495, 1591, 1647
BstH2I	RGCGCY	1 cut(s)	885
BstHHI	GCGC	2 cut(s)	884, 1709
BstKTI	GATC	8 cut(s)	205, 360, 393, 618, 1194, 1204, 1238, 1648
BstMAI	GTCTC	5 cut(s)	13, 174, 226, 835, 876
BstMBI	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
BstMWI	GCNNNNNNNGC	7 cut(s)	125, 427, 1351, 1436, 1460, 1539, 1829
BstNI	CCWGG	3 cut(s)	174, 188, 960
BstNSI	RCATGY	3 cut(s)	1331, 1354, 1713
BstSCI	CCNGG	3 cut(s)	172, 186, 958
BstSFI	CTRYAG	2 cut(s)	742, 1139
BstV1I	GCAGC	1 cut(s)	1450
BstV2I	GAAGAC	2 cut(s)	521, 1750
BstX2I	RGATCY	2 cut(s)	615, 1645
BstYI	RGATCY	2 cut(s)	615, 1645
BstZ17I	GTATAC	1 cut(s)	1063
BsuRI	GGCC	5 cut(s)	239, 288, 1341, 1430, 1810
BtgI	CCRYGG	1 cut(s)	1449
BtsCI	GGATG	4 cut(s)	12, 1495, 1591, 1647
BtsIMutI	CAGTG	6 cut(s)	223, 321, 686, 1119, 1477, 1799
Cac8I	GCNNGC	6 cut(s)	286, 702, 1343, 1705, 1711, 1870
CfoI	GCGC	2 cut(s)	884, 1709
Cfr10I	RCCGGY	3 cut(s)	330, 673, 1271
CseI	GACGC	1 cut(s)	632
Csp6I	GTAC	4 cut(s)	83, 157, 302, 941
CspAI	ACCGGT	3 cut(s)	330, 673, 1271
CspCI	CAANNNNNGTGG	2 cut(s)	795, 830
CviQI	GTAC	4 cut(s)	83, 157, 302, 941
DdeI	CTNAG	5 cut(s)	523, 619, 1122, 1188, 1791
DpnI	GATC	8 cut(s)	204, 359, 392, 617, 1193, 1203, 1237, 1647
DpnII	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
Eam1104I	CTCTTC	2 cut(s)	912, 1605
EarI	CTCTTC	2 cut(s)	912, 1605
EciI	GGCGGA	1 cut(s)	1502
Ecl136II	GAGCTC	1 cut(s)	1868
Eco130I	CCWWGG	5 cut(s)	234, 1107, 1449, 1698, 1811
Eco147I	AGGCCT	1 cut(s)	1810
Eco24I	GRGCYC	1 cut(s)	1870
Eco31I	GGTCTC	1 cut(s)	174
Eco32I	GATATC	1 cut(s)	1000
Eco47III	AGCGCT	1 cut(s)	883
Eco53kI	GAGCTC	1 cut(s)	1868
Eco57I	CTGAAG	3 cut(s)	628, 953, 1629
EcoICRI	GAGCTC	1 cut(s)	1868
EcoNI	CCTNNNNNAGG	1 cut(s)	1142
EcoRI	GAATTC	1 cut(s)	1816
EcoRII	CCWGG	3 cut(s)	172, 186, 958
EcoRV	GATATC	1 cut(s)	1000
EcoT14I	CCWWGG	5 cut(s)	234, 1107, 1449, 1698, 1811
EcoT22I	ATGCAT	1 cut(s)	1356
EcoT38I	GRGCYC	1 cut(s)	1870
ErhI	CCWWGG	5 cut(s)	234, 1107, 1449, 1698, 1811
FalI	AAGNNNNNCTT	2 cut(s)	1827, 1859
FaqI	GGGAC	3 cut(s)	492, 653, 681
FauI	CCCGC	1 cut(s)	630
FauNDI	CATATG	1 cut(s)	767
FblI	GTMKAC	2 cut(s)	1062, 1796
Fnu4HI	GCNGC	1 cut(s)	1464
FokI	GGATG	3 cut(s)	1502, 1598, 1654
FriOI	GRGCYC	1 cut(s)	1870
Fsp4HI	GCNGC	1 cut(s)	1464
FspBI	CTAG	4 cut(s)	248, 299, 977, 1455
GlaI	GCGC	2 cut(s)	883, 1708
GluI	GCNGC	1 cut(s)	1464
GsaI	CCCAGC	1 cut(s)	79
GsuI	CTGGAG	3 cut(s)	156, 981, 1823
HaeII	RGCGCY	1 cut(s)	885
HaeIII	GGCC	5 cut(s)	239, 288, 1341, 1430, 1810
HapII	CCGG	3 cut(s)	331, 674, 1272
HgaI	GACGC	1 cut(s)	632
HhaI	GCGC	2 cut(s)	884, 1709
Hin6I	GCGC	2 cut(s)	882, 1707
HinP1I	GCGC	2 cut(s)	882, 1707
HincII	GTYRAC	1 cut(s)	1797
HindII	GTYRAC	1 cut(s)	1797
HindIII	AAGCTT	2 cut(s)	848, 950
HinfI	GANTC	7 cut(s)	406, 439, 451, 1027, 1303, 1415, 1793
HpaII	CCGG	3 cut(s)	331, 674, 1272
HphI	GGTGA	5 cut(s)	49, 301, 403, 485, 1177
Hpy166II	GTNNAC	4 cut(s)	820, 1063, 1381, 1797
Hpy188III	TCNNGA	3 cut(s)	361, 875, 1412
Hpy8I	GTNNAC	4 cut(s)	820, 1063, 1381, 1797
Hpy99I	CGWCG	2 cut(s)	831, 1199
HpyAV	CCTTC	3 cut(s)	1078, 1138, 1576
HpyCH4III	ACNGT	5 cut(s)	48, 90, 168, 1043, 1472
HpyCH4IV	ACGT	2 cut(s)	19, 155
HpyF10VI	GCNNNNNNNGC	7 cut(s)	125, 427, 1351, 1436, 1460, 1539, 1829
HpyF3I	CTNAG	5 cut(s)	523, 619, 1122, 1188, 1791
HpySE526I	ACGT	2 cut(s)	19, 155
HspAI	GCGC	2 cut(s)	882, 1707
Kzo9I	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
Lsp1109I	GCAGC	1 cut(s)	1450
LweI	GCATC	4 cut(s)	115, 741, 1188, 1383
MaeI	CTAG	4 cut(s)	248, 299, 977, 1455
MaeII	ACGT	2 cut(s)	19, 155
MaeIII	GTNAC	5 cut(s)	257, 473, 1117, 1400, 1474
MalI	GATC	8 cut(s)	204, 359, 392, 617, 1193, 1203, 1237, 1647
MboI	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
MfeI	CAATTG	1 cut(s)	228
MflI	RGATCY	2 cut(s)	615, 1645
MhlI	GDGCHC	1 cut(s)	1870
MluCI	AATT	9 cut(s)	66, 228, 531, 608, 649, 807, 1008, 1074, 1816
MlyI	GAGTC	3 cut(s)	1312, 1409, 1802
MmeI	TCCRAC	2 cut(s)	736, 1673
Mph1103I	ATGCAT	1 cut(s)	1356
MroXI	GAANNNNTTC	2 cut(s)	1839, 1842
MseI	TTAA	4 cut(s)	530, 597, 603, 1313
MslI	CAYNNNNRTG	1 cut(s)	136
MspA1I	CMGCKG	1 cut(s)	637
MspI	CCGG	3 cut(s)	331, 674, 1272
MspR9I	CCNGG	3 cut(s)	174, 188, 960
MunI	CAATTG	1 cut(s)	228
Mva1269I	GAATGC	1 cut(s)	1289
MvaI	CCWGG	3 cut(s)	174, 188, 960
MwoI	GCNNNNNNNGC	7 cut(s)	125, 427, 1351, 1436, 1460, 1539, 1829
NcoI	CCATGG	1 cut(s)	1449
NdeI	CATATG	1 cut(s)	767
NdeII	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
NlaIV	GGNNCC	3 cut(s)	589, 893, 1647
NmuCI	GTSAC	2 cut(s)	473, 1117
NsiI	ATGCAT	1 cut(s)	1356
NspI	RCATGY	3 cut(s)	1331, 1354, 1713
PaeI	GCATGC	1 cut(s)	1713
PceI	AGGCCT	1 cut(s)	1810
PciI	ACATGT	1 cut(s)	1327
PcsI	WCGNNNNNNNCGW	1 cut(s)	1793
PctI	GAATGC	1 cut(s)	1289
PdmI	GAANNNNTTC	2 cut(s)	1839, 1842
PfeI	GAWTC	4 cut(s)	406, 439, 451, 1027
PfoI	TCCNGGA	1 cut(s)	958
PinAI	ACCGGT	3 cut(s)	330, 673, 1271
PkrI	GCNGC	1 cut(s)	1465
PleI	GAGTC	3 cut(s)	1311, 1409, 1801
PpsI	GAGTC	3 cut(s)	1311, 1409, 1801
PscI	ACATGT	1 cut(s)	1327
Psp124BI	GAGCTC	1 cut(s)	1870
Psp6I	CCWGG	3 cut(s)	172, 186, 958
PspFI	CCCAGC	1 cut(s)	75
PspGI	CCWGG	3 cut(s)	172, 186, 958
PspN4I	GGNNCC	3 cut(s)	589, 893, 1647
PstI	CTGCAG	1 cut(s)	1143
PsuI	RGATCY	2 cut(s)	615, 1645
RsaI	GTAC	4 cut(s)	84, 158, 303, 942
RsaNI	GTAC	4 cut(s)	83, 157, 302, 941
RseI	CAYNNNNRTG	1 cut(s)	136
SacI	GAGCTC	1 cut(s)	1870
SalI	GTCGAC	1 cut(s)	1795
SaqAI	TTAA	4 cut(s)	530, 597, 603, 1313
SatI	GCNGC	1 cut(s)	1464
Sau3AI	GATC	8 cut(s)	202, 357, 390, 615, 1191, 1201, 1235, 1645
SchI	GAGTC	3 cut(s)	1312, 1409, 1802
ScrFI	CCNGG	3 cut(s)	174, 188, 960
SduI	GDGCHC	1 cut(s)	1870
SfaNI	GCATC	4 cut(s)	115, 741, 1188, 1383
SfcI	CTRYAG	2 cut(s)	742, 1139
SmiMI	CAYNNNNRTG	1 cut(s)	136
SpeI	ACTAGT	1 cut(s)	298
SphI	GCATGC	1 cut(s)	1713
Sse9I	AATT	9 cut(s)	66, 228, 531, 608, 649, 807, 1008, 1074, 1816
SseBI	AGGCCT	1 cut(s)	1810
SsiI	CCGC	2 cut(s)	637, 1487
SspMI	CTAG	4 cut(s)	248, 299, 977, 1455
SstI	GAGCTC	1 cut(s)	1870
StuI	AGGCCT	1 cut(s)	1810
StyD4I	CCNGG	3 cut(s)	172, 186, 958
StyI	CCWWGG	5 cut(s)	234, 1107, 1449, 1698, 1811
TaaI	ACNGT	5 cut(s)	48, 90, 168, 1043, 1472
TaiI	ACGT	2 cut(s)	22, 158
TaqI	TCGA	5 cut(s)	98, 389, 512, 1194, 1796
TasI	AATT	9 cut(s)	66, 228, 531, 608, 649, 807, 1008, 1074, 1816
TatI	WGTACW	1 cut(s)	940
TfiI	GAWTC	4 cut(s)	406, 439, 451, 1027
Tru1I	TTAA	4 cut(s)	530, 597, 603, 1313
Tru9I	TTAA	4 cut(s)	530, 597, 603, 1313
TscAI	CASTG	6 cut(s)	223, 328, 693, 1126, 1477, 1806
TseFI	GTSAC	2 cut(s)	473, 1117
TseI	GCWGC	1 cut(s)	1463
Tsp45I	GTSAC	2 cut(s)	473, 1117
TspRI	CASTG	6 cut(s)	223, 328, 693, 1126, 1477, 1806
XagI	CCTNNNNNAGG	1 cut(s)	1142
XapI	RAATTY	3 cut(s)	66, 608, 1816
XceI	RCATGY	3 cut(s)	1331, 1354, 1713
XcmI	CCANNNNNNNNNTGG	2 cut(s)	467, 1046
XmiI	GTMKAC	2 cut(s)	1062, 1796
XmnI	GAANNNNTTC	2 cut(s)	1839, 1842
XspI	CTAG	4 cut(s)	248, 299, 977, 1455
Zsp2I	ATGCAT	1 cut(s)	1356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.