pycom15g26370

AP2-like ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
21238570 .. 21241675
3106 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g26370.5

Sequence Viewer

Length: 1995 bp
ATGAAGTCCATGAGTAATGATGGTAGCAACAGTAACAGTAATAATAACTGGTTGGATTTTTCACTGTCTCCAAACATGAAGATTGAGTCATCTTCCTCTTCTGTTGCTGCTGCTGCTAGCTTTTTTCACTCACCACCTCACTTTAACTATGGAATTTACTATGGCCTTGAAGGAGGAGGAGGAGGAGGAAGAGGGGAGGATAACAGTCCAGTCCTGTACTCCCCTCTTTCCATGATGCCACTCAAGTCTGATGGCTCTCTCTGCATAATGGAAGCATTCAACGGGTCCCAGCACCACCTTCAAGCTGCAATGGTGACAACAACTAGTCCAACTCCAAAACTAGAGGACTTCTTTGGAGGTGCAACCATGGGGACCCATCAATATGAAAGCAGTGACAGAGAAGCCATGGCTCTCAGCTTAGACAGCATGTTCTACCTCCAAAACCCACACCCAACAACCCAACATCATGTACCCAGCAACCACCAAAACTTGATGAGCCATAGTCTTCAGCAGCACCAGCAGCAGACCCAGCAACACCAACAACAGTACTCATCATCATACTACTCAGGCCTCAGAACCCATGCGACGATCTTGGAGGAGGGTCACAAACAAACCCATGTTTCAGCAGATTATTACAATATGCACCCAGCAAGAATAGGGATTGATCAGAGCATTGCAGAGATGAAGAGCTGGGTTTCCAGAAACAATGCCATGGATCAGAACAACATGGCTGCTGGGTGCATGGGAGAAAATGGGGGATTGTCCTATGGGGATTTGCAGTGTCTGAGCTTGTCCATGAGCCCTGGCTCACAGTCTAGCTGTGTGACCAGCTCACAGCAGATTTCTCCCACTGTGACTACAGATTGTGTGACATTGGTGGATACCAAGAAAAGAGGGCTTGAAAAGGTAGATCAAAAGCAGATTGTCCACAGGAAGTCCTTGGATACATTTGGCCAAAGAACCTCTCAGTACAGAGGAGTCACAAGGCACCGATGGACCGGTCGATATGAAGCACATCTATGGGACAATAGTTGCAAGAAAGAAGGCCAGAGCAGGAAGGGAAGGCAAGGTTGTTTTTGTTTATCTAATCATTCCAAATTTTGCATTTTAGGAGGTTATGATATGGAGGAAAAAGCTGCAAGAGCTTATGATCTAGCAGCACTCAAGTATTGGGGACCATCCACTCACATTAATTTCCCATTGGAAGACTATAAAAAAGAACTAGAGGACATGAAGAATATGACCAGACAAGAATATGTTGCTCACTTGAGAAGGAAAAGCAGTGGATTCTCAAGAGGGGCTTCAATGTACAGAGGAGTGACAAGACATCATCAACATGGAAGATGGCAAGCTAGGATCGGAAGGGTTGCTGGAAATAAGGATCTTTATCTTGGGACATTCAGCACCCAAGAGGAAGCTGCTGAGGCTTATGACATAGCTGCTATCAAATTTCGAGGACTGAATGCTGTGACCAACTTTGACATAACACGGTATGATGTGGATCAGATTATGTCTAGCAATACCCTTCTTGCCAGTGAACTTGCCAAGCGAAACAAGGAGGTTGTGCTCGTTAATGAGGGTACTAATCAAAACAATGTCACCCAAATCGGCAATGGGGAAGCTGTTGTCTCACGGAAGAACATTAGTGAAGGTGAAGATTGGAAAATGGCACTCTACCAGTCCTCCCAGCAACTTGATCAGAAGCAACCGAGCACTGAAACTCGCAATGTGACTCAAGCTGAGGCAGAGGACTTTGGCAAAATGGGGGCTGCTCATTTTTCCAATGCATCTTCATTGGTGACAAGTTTAGGTAGCTCAAGAGAAGGGAGCCCTGATAAGTCAAGCCAACCAAGTTTCTTCGGAATGCCTCCATCTGCTTCCAAGTTTTTCACAAGTTCAAGTGATGCAGTGAGTTCTTGGATCCCAACAGTCCAATCCAGGCCAGGACTCACCAACCCTCACATGCCGATTTTCGCAAACTGGACAGATGCATAG

Protein Analysis

665

Amino Acids

73.58

Weight (kDa)

6.97

Isoelectric Point (pI)

52.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 987
AclWI GGATC 6 cut(s) 723, 1364, 1389, 1509, 1915, 1928
AcoI YGGCCR 1 cut(s) 952
AcsI RAATTY 3 cut(s) 153, 1097, 1448
AcuI CTGAAG 1 cut(s) 491
AfaI GTAC 6 cut(s) 218, 471, 548, 971, 1310, 1582
AgeI ACCGGT 1 cut(s) 998
AgsI TTSAA 6 cut(s) 170, 280, 302, 902, 1305, 1899
AhlI ACTAGT 1 cut(s) 323
AjnI CCWGG 3 cut(s) 802, 1937, 1942
Alw21I GWGCWC 2 cut(s) 1569, 1715
Alw26I GTCTC 2 cut(s) 72, 1633
AlwI GGATC 6 cut(s) 723, 1364, 1389, 1509, 1915, 1928
AlwNI CAGNNNCTG 1 cut(s) 784
AoxI GGCC 5 cut(s) 163, 568, 952, 1045, 1940
ApoI RAATTY 3 cut(s) 153, 1097, 1448
AseI ATTAAT 1 cut(s) 1191
AsiGI ACCGGT 1 cut(s) 998
AspS9I GGNCC 4 cut(s) 285, 372, 996, 1175
AsuHPI GGTGA 6 cut(s) 123, 325, 1591, 1664, 1810, 1942
AsuNHI GCTAGC 1 cut(s) 116
AvaII GGWCC 4 cut(s) 285, 372, 996, 1175
BalI TGGCCA 1 cut(s) 954
BamHI GGATCC 1 cut(s) 1920
BanI GGYRCC 1 cut(s) 987
BanII GRGCYC 2 cut(s) 803, 1832
BbsI GAAGAC 2 cut(s) 497, 1212
Bbv12I GWGCWC 2 cut(s) 1569, 1715
BbvCI CCTCAGC 2 cut(s) 1422, 1740
BccI CCATC 7 cut(s) 14, 245, 384, 987, 1186, 1338, 1879
BciT130I CCWGG 3 cut(s) 804, 1939, 1944
BciVI GTATCC 2 cut(s) 874, 937
BclI TGATCA 2 cut(s) 664, 1696
BcoDI GTCTC 2 cut(s) 72, 1633
BcuI ACTAGT 1 cut(s) 323
BfaI CTAG 8 cut(s) 117, 324, 341, 816, 1154, 1223, 1353, 1515
BfmI CTRYAG 1 cut(s) 858
BfuI GTATCC 2 cut(s) 874, 937
BmcAI AGTACT 1 cut(s) 548
Bme1390I CCNGG 3 cut(s) 804, 1939, 1944
Bme18I GGWCC 4 cut(s) 285, 372, 996, 1175
BmgT120I GGNCC 4 cut(s) 285, 372, 996, 1175
BmiI GGNNCC 8 cut(s) 286, 287, 373, 374, 989, 1176, 1829, 1922
BmrFI CCNGG 3 cut(s) 804, 1939, 1944
BmsI GCATC 4 cut(s) 225, 1796, 1894, 1978
BmtI GCTAGC 1 cut(s) 120
BpiI GAAGAC 2 cut(s) 497, 1212
Bpu10I CCTNAGC 2 cut(s) 1422, 1740
BpuEI CTTGAG 6 cut(s) 227, 1148, 1276, 1288, 1719, 1801
BsaBI GATNNNNATC 2 cut(s) 1386, 1500
BsaJI CCNNGG 5 cut(s) 366, 405, 711, 802, 939
BsaWI WCCGGW 1 cut(s) 998
BsaXI ACNNNNNCTCC 2 cut(s) 1667, 1697
Bse118I RCCGGY 1 cut(s) 998
Bse1I ACTGG 5 cut(s) 53, 209, 1533, 1678, 1985
Bse3DI GCAATG 4 cut(s) 315, 672, 1618, 1732
Bse8I GATNNNNATC 2 cut(s) 1386, 1500
BseBI CCWGG 3 cut(s) 804, 1939, 1944
BseDI CCNNGG 5 cut(s) 366, 405, 711, 802, 939
BseGI GGATG 1 cut(s) 1178
BseJI GATNNNNATC 2 cut(s) 1386, 1500
BseMI GCAATG 4 cut(s) 315, 672, 1618, 1732
BseMII CTCAG 7 cut(s) 427, 579, 586, 776, 980, 1413, 1731
BseNI ACTGG 5 cut(s) 53, 209, 1533, 1678, 1985
BseRI GAGGAG 7 cut(s) 189, 192, 195, 198, 611, 990, 1329
BseYI CCCAGC 7 cut(s) 288, 473, 528, 646, 690, 734, 1686
Bsh1285I CGRYCG 1 cut(s) 1003
BshFI GGCC 5 cut(s) 165, 570, 954, 1047, 1942
BshNI GGYRCC 1 cut(s) 987
BshTI ACCGGT 1 cut(s) 998
BsiEI CGRYCG 1 cut(s) 1003
BsiHKAI GWGCWC 2 cut(s) 1569, 1715
BsiSI CCGG 1 cut(s) 999
BslFI GGGAC 5 cut(s) 271, 385, 1037, 1188, 1408
BsmAI GTCTC 2 cut(s) 72, 1633
BsmFI GGGAC 5 cut(s) 271, 385, 1037, 1188, 1408
BsmI GAATGC 3 cut(s) 275, 1468, 1869
BsnI GGCC 5 cut(s) 165, 570, 954, 1047, 1942
Bsp1286I GDGCHC 4 cut(s) 803, 1569, 1715, 1832
Bsp1407I TGTACA 1 cut(s) 1308
Bsp19I CCATGG 3 cut(s) 366, 405, 711
BspANI GGCC 5 cut(s) 165, 570, 954, 1047, 1942
BspCNI CTCAG 7 cut(s) 426, 578, 585, 777, 979, 1414, 1732
BspLI GGNNCC 8 cut(s) 286, 287, 373, 374, 989, 1176, 1829, 1922
BspOI GCTAGC 1 cut(s) 120
BspPI GGATC 6 cut(s) 723, 1364, 1389, 1509, 1915, 1928
BspQI GCTCTTC 1 cut(s) 680
BspT107I GGYRCC 1 cut(s) 987
BsrDI GCAATG 4 cut(s) 315, 672, 1618, 1732
BsrFI RCCGGY 1 cut(s) 998
BsrGI TGTACA 1 cut(s) 1308
BsrI ACTGG 5 cut(s) 53, 209, 1533, 1678, 1985
BssAI RCCGGY 1 cut(s) 998
BssECI CCNNGG 5 cut(s) 366, 405, 711, 802, 939
BssT1I CCWWGG 4 cut(s) 366, 405, 711, 939
Bst2UI CCWGG 3 cut(s) 804, 1939, 1944
Bst4CI ACNGT 9 cut(s) 32, 38, 66, 206, 546, 813, 853, 1491, 1930
Bst6I CTCTTC 3 cut(s) 103, 184, 680
BstAUI TGTACA 1 cut(s) 1308
BstC8I GCNNGC 2 cut(s) 118, 1350
BstDEI CTNAG 8 cut(s) 413, 418, 565, 572, 785, 966, 1422, 1740
BstDSI CCRYGG 3 cut(s) 366, 405, 711
BstF5I GGATG 1 cut(s) 1178
BstMAI GTCTC 2 cut(s) 72, 1633
BstMCI CGRYCG 1 cut(s) 1003
BstMWI GCNNNNNNNGC 8 cut(s) 113, 261, 423, 517, 520, 529, 1142, 1424
BstNI CCWGG 3 cut(s) 804, 1939, 1944
BstNSI RCATGY 2 cut(s) 430, 1966
BstSCI CCNGG 3 cut(s) 802, 1937, 1942
BstSFI CTRYAG 1 cut(s) 858
BstV2I GAAGAC 2 cut(s) 497, 1212
BstX2I RGATCY 2 cut(s) 1381, 1920
BstYI RGATCY 2 cut(s) 1381, 1920
BsuI GTATCC 2 cut(s) 874, 937
BsuRI GGCC 5 cut(s) 165, 570, 954, 1047, 1942
BtgI CCRYGG 3 cut(s) 366, 405, 711
BtsCI GGATG 1 cut(s) 1178
BtsI GCAGTG 4 cut(s) 397, 785, 1288, 1914
BtsIMutI CAGTG 8 cut(s) 62, 397, 785, 849, 1288, 1540, 1713, 1914
Cac8I GCNNGC 2 cut(s) 118, 1350
CaiI CAGNNNCTG 1 cut(s) 784
Cfr10I RCCGGY 1 cut(s) 998
Cfr13I GGNCC 4 cut(s) 285, 372, 996, 1175
Csp6I GTAC 6 cut(s) 217, 470, 547, 970, 1309, 1581
CspAI ACCGGT 1 cut(s) 998
CviQI GTAC 6 cut(s) 217, 470, 547, 970, 1309, 1581
DdeI CTNAG 8 cut(s) 413, 418, 565, 572, 785, 966, 1422, 1740
EaeI YGGCCR 1 cut(s) 952
Eam1104I CTCTTC 3 cut(s) 103, 184, 680
EarI CTCTTC 3 cut(s) 103, 184, 680
Eco130I CCWWGG 4 cut(s) 366, 405, 711, 939
Eco147I AGGCCT 1 cut(s) 570
Eco24I GRGCYC 2 cut(s) 803, 1832
Eco47I GGWCC 4 cut(s) 285, 372, 996, 1175
Eco57I CTGAAG 1 cut(s) 491
EcoO109I RGGNCCY 2 cut(s) 285, 372
EcoRII CCWGG 3 cut(s) 802, 1937, 1942
EcoT14I CCWWGG 4 cut(s) 366, 405, 711, 939
EcoT22I ATGCAT 2 cut(s) 1789, 1993
EcoT38I GRGCYC 2 cut(s) 803, 1832
ErhI CCWWGG 4 cut(s) 366, 405, 711, 939
FalI AAGNNNNNCTT 2 cut(s) 1285, 1317
FaqI GGGAC 5 cut(s) 271, 385, 1037, 1188, 1408
FbaI TGATCA 2 cut(s) 664, 1696
FokI GGATG 1 cut(s) 1165
FriOI GRGCYC 2 cut(s) 803, 1832
FspBI CTAG 8 cut(s) 117, 324, 341, 816, 1154, 1223, 1353, 1515
GsaI CCCAGC 7 cut(s) 292, 477, 532, 650, 694, 738, 1690
HaeIII GGCC 5 cut(s) 165, 570, 954, 1047, 1942
HapII CCGG 1 cut(s) 999
HinfI GANTC 5 cut(s) 86, 978, 1287, 1732, 1947
HpaII CCGG 1 cut(s) 999
HphI GGTGA 6 cut(s) 123, 325, 1591, 1664, 1810, 1942
Hpy166II GTNNAC 2 cut(s) 928, 1538
Hpy188I TCNGA 9 cut(s) 250, 575, 669, 720, 786, 1361, 1506, 1701, 1862
Hpy188III TCNNGA 3 cut(s) 699, 1293, 1818
Hpy8I GTNNAC 2 cut(s) 928, 1538
Hpy99I CGWCG 1 cut(s) 589
HpyCH4III ACNGT 9 cut(s) 32, 38, 66, 206, 546, 813, 853, 1491, 1930
HpyF10VI GCNNNNNNNGC 8 cut(s) 113, 261, 423, 517, 520, 529, 1142, 1424
HpyF3I CTNAG 8 cut(s) 413, 418, 565, 572, 785, 966, 1422, 1740
KflI GGGWCCC 2 cut(s) 285, 372
Ksp22I TGATCA 2 cut(s) 664, 1696
LguI GCTCTTC 1 cut(s) 680
LmnI GCTCC 1 cut(s) 1827
LweI GCATC 4 cut(s) 225, 1796, 1894, 1978
MaeI CTAG 8 cut(s) 117, 324, 341, 816, 1154, 1223, 1353, 1515
MflI RGATCY 2 cut(s) 1381, 1920
MhlI GDGCHC 4 cut(s) 803, 1569, 1715, 1832
MlsI TGGCCA 1 cut(s) 954
MluCI AATT 4 cut(s) 153, 1097, 1192, 1448
MluNI TGGCCA 1 cut(s) 954
MlyI GAGTC 4 cut(s) 95, 987, 1726, 1941
MmeI TCCRAC 2 cut(s) 33, 353
Mox20I TGGCCA 1 cut(s) 954
Mph1103I ATGCAT 2 cut(s) 1789, 1993
MscI TGGCCA 1 cut(s) 954
MseI TTAA 3 cut(s) 144, 1191, 1572
MslI CAYNNNNRTG 3 cut(s) 381, 1018, 1335
Msp20I TGGCCA 1 cut(s) 954
MspI CCGG 1 cut(s) 999
MspR9I CCNGG 3 cut(s) 804, 1939, 1944
Mva1269I GAATGC 3 cut(s) 275, 1468, 1869
MvaI CCWGG 3 cut(s) 804, 1939, 1944
MwoI GCNNNNNNNGC 8 cut(s) 113, 261, 423, 517, 520, 529, 1142, 1424
NcoI CCATGG 3 cut(s) 366, 405, 711
NheI GCTAGC 1 cut(s) 116
NlaIV GGNNCC 8 cut(s) 286, 287, 373, 374, 989, 1176, 1829, 1922
NsiI ATGCAT 2 cut(s) 1789, 1993
NspI RCATGY 2 cut(s) 430, 1966
PceI AGGCCT 1 cut(s) 570
PciSI GCTCTTC 1 cut(s) 680
PctI GAATGC 3 cut(s) 275, 1468, 1869
PfeI GAWTC 1 cut(s) 1287
PinAI ACCGGT 1 cut(s) 998
PleI GAGTC 4 cut(s) 94, 986, 1726, 1941
PpsI GAGTC 4 cut(s) 94, 986, 1726, 1941
PpuMI RGGWCCY 2 cut(s) 285, 372
PshBI ATTAAT 1 cut(s) 1191
Psp5II RGGWCCY 2 cut(s) 285, 372
Psp6I CCWGG 3 cut(s) 802, 1937, 1942
PspFI CCCAGC 7 cut(s) 288, 473, 528, 646, 690, 734, 1686
PspGI CCWGG 3 cut(s) 802, 1937, 1942
PspN4I GGNNCC 8 cut(s) 286, 287, 373, 374, 989, 1176, 1829, 1922
PspPI GGNCC 4 cut(s) 285, 372, 996, 1175
PspPPI RGGWCCY 2 cut(s) 285, 372
PstNI CAGNNNCTG 1 cut(s) 784
PsuI RGATCY 2 cut(s) 1381, 1920
RsaI GTAC 6 cut(s) 218, 471, 548, 971, 1310, 1582
RsaNI GTAC 6 cut(s) 217, 470, 547, 970, 1309, 1581
RseI CAYNNNNRTG 3 cut(s) 381, 1018, 1335
SapI GCTCTTC 1 cut(s) 680
SaqAI TTAA 3 cut(s) 144, 1191, 1572
Sau96I GGNCC 4 cut(s) 285, 372, 996, 1175
ScaI AGTACT 1 cut(s) 548
SchI GAGTC 4 cut(s) 95, 987, 1726, 1941
ScrFI CCNGG 3 cut(s) 804, 1939, 1944
SduI GDGCHC 4 cut(s) 803, 1569, 1715, 1832
SfaNI GCATC 4 cut(s) 225, 1796, 1894, 1978
SfcI CTRYAG 1 cut(s) 858
SinI GGWCC 4 cut(s) 285, 372, 996, 1175
SmiMI CAYNNNNRTG 3 cut(s) 381, 1018, 1335
SmlI CTYRAG 6 cut(s) 242, 1163, 1267, 1291, 1734, 1816
SmoI CTYRAG 6 cut(s) 242, 1163, 1267, 1291, 1734, 1816
SpeI ACTAGT 1 cut(s) 323
Sse9I AATT 4 cut(s) 153, 1097, 1192, 1448
SseBI AGGCCT 1 cut(s) 570
SspMI CTAG 8 cut(s) 117, 324, 341, 816, 1154, 1223, 1353, 1515
StuI AGGCCT 1 cut(s) 570
StyD4I CCNGG 3 cut(s) 802, 1937, 1942
StyI CCWWGG 4 cut(s) 366, 405, 711, 939
TaaI ACNGT 9 cut(s) 32, 38, 66, 206, 546, 813, 853, 1491, 1930
TaqI TCGA 2 cut(s) 1003, 1453
TasI AATT 4 cut(s) 153, 1097, 1192, 1448
TatI WGTACW 4 cut(s) 216, 546, 969, 1308
TfiI GAWTC 1 cut(s) 1287
Tru1I TTAA 3 cut(s) 144, 1191, 1572
Tru9I TTAA 3 cut(s) 144, 1191, 1572
TscAI CASTG 8 cut(s) 69, 397, 785, 856, 1288, 1540, 1720, 1914
TspDTI ATGAA 7 cut(s) 17, 92, 399, 698, 1023, 1247, 1782
TspGWI ACGGA 1 cut(s) 1648
TspRI CASTG 8 cut(s) 69, 397, 785, 856, 1288, 1540, 1720, 1914
VpaK11BI GGWCC 4 cut(s) 285, 372, 996, 1175
VspI ATTAAT 1 cut(s) 1191
XapI RAATTY 3 cut(s) 153, 1097, 1448
XceI RCATGY 2 cut(s) 430, 1966
XcmI CCANNNNNNNNNTGG 1 cut(s) 1610
XspI CTAG 8 cut(s) 117, 324, 341, 816, 1154, 1223, 1353, 1515
ZrmI AGTACT 1 cut(s) 548
Zsp2I ATGCAT 2 cut(s) 1789, 1993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.