Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010338

Physical Location & Seq

Genomic Coordinates Forward (+)

40726850 .. 40729130

Gene Structure 2281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G489200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 888 bp

ATGGACATGGTCAGATTGAAACTCAGCATTCAGAGACAGAACAAAAGAGCCCAATTTCTTCGTACTGCTTGCGGTAACAAAACCATGCAGTTATATCACCACCCATTCTCATTGGACAGCCAAAGAGTGAGACTTGCTTTGGAGGAAAAAGGCATTGATTATACATCATTCCATGTCAATCCTGTAACAGGCAAGAACATGGATGCCTCATTCTTCAGGATGAATTCGACCGCAAAACTCCCGGTTTTCCAGAACGGCGGCCATGTCATTTTCGACACGATTGAGATCATTCAATATTTAGAAAAAATTGCGAAAGTCTCATCAGGCGATGAGAACATCCCATTAAGCAGCAGTGAAGTCATTGAATGGATGCATAAGATACAAAAATGGAACCCCAAGTTTTTCACACTTTGTCACATCCCAGAGAAGCACCGTCGTTACGTCTCTAAATTCCTAAGGCAGGTGCTCATTGCTCGAATGGCAGAAACTCCTGATTTGGCAGCTGATTATCACAAGAAGTTAAAAGAAGCATATGAGACGGAAGAAAAGTTGAAAAACCCGGATGTTTTGAAACAGGACAAGGAACACCTAATAAGACTTCTTGATGAAGTTGAAACACAGCTCAATGAAACGGCATATTTAGCCGGGAAAGAGTTTGGCATGGCAGATGTGATGCTCATTCCGGTGCTCGCACGGTTAGTGATCTTGAATTTGGAGGATGAGTATATAGGTGGCCGGCCGAACATGGCTAAATACTGGATCATGGTGCAGCAGAGGCCTAGTTATAAGAAGGTGATTGGGAAGCATTTCTGTGGCTGGAGGAAGCACAAAACATTCGTGAAAACATGGTGCATAGTTCACATCAGAACCATGCTAAGGAAATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016740 GO:0016765 GO:0034641 GO:0043603 GO:0044237 GO:0044424 GO:0044464 GO:0051186 GO:0071704 GO:0071944 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N_3

Protein Analysis

296

Amino Acids

34.67

Weight (kDa)

9.53

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77290 AT1G77290 AT1G77290
fragaria_vesca	FvH4_2g27900
malus_domestica	MD08G1159700.v1.1 MD15G1133600.v1.1
prunus_persica	Prupe.1G489200_v2.0.a1 Prupe.1G489200_v2.0.a1 Prupe.1G489200_v2.0.a1
pyrus_communis	pycom15g12040
rosa_chinensis	RchiOBHm_Chr6g0296751
rosa_laevigata	RLG00000011662
rosa_multiflora	Rmu_ssc0000192.1_g000007
rosa_roxburghii	Rroxscaffold_7G00171200
rosa_rugosa	Rorug06G0265500 Rorug06G0265600
rosa_samantha	Rh6AG376600 Rh6BG384900 Rh6CG390300 Rh6DG377400
rosa_wichuraiana	Rw6G032930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	786
AarI	CACCTGC	1 cut(s)	451
Acc36I	ACCTGC	1 cut(s)	451
AciI	CCGC	3 cut(s)	72, 231, 258
AclWI	GGATC	1 cut(s)	767
AcoI	YGGCCR	3 cut(s)	259, 733, 737
AcsI	RAATTY	4 cut(s)	223, 449, 709, 881
AcuI	CTGAAG	1 cut(s)	199
AfaI	GTAC	1 cut(s)	64
AfiI	CCNNNNNNNGG	3 cut(s)	188, 460, 876
AgsI	TTSAA	7 cut(s)	19, 293, 365, 553, 571, 614, 709
AluBI	AGCT	2 cut(s)	503, 622
AluI	AGCT	2 cut(s)	503, 622
Alw21I	GWGCWC	2 cut(s)	468, 690
Alw26I	GTCTC	5 cut(s)	28, 124, 322, 448, 530
AlwI	GGATC	1 cut(s)	767
AoxI	GGCC	4 cut(s)	259, 733, 737, 776
ApeKI	GCWGC	3 cut(s)	348, 500, 769
ApoI	RAATTY	4 cut(s)	223, 449, 709, 881
Asp700I	GAANNNNTTC	1 cut(s)	806
AsuC2I	CCSGG	3 cut(s)	242, 560, 646
AsuHPI	GGTGA	2 cut(s)	89, 805
AxyI	CCTNAGG	1 cut(s)	455
BanII	GRGCYC	1 cut(s)	52
Bbv12I	GWGCWC	2 cut(s)	468, 690
BbvI	GCAGC	3 cut(s)	360, 512, 781
BceAI	ACGGC	2 cut(s)	271, 648
BcnI	CCSGG	3 cut(s)	242, 560, 646
BcoDI	GTCTC	5 cut(s)	28, 124, 322, 448, 530
BfaI	CTAG	1 cut(s)	780
BfuAI	ACCTGC	1 cut(s)	451
BisI	GCNGC	4 cut(s)	259, 349, 501, 770
BlsI	GCNGC	4 cut(s)	260, 350, 502, 771
Bme1390I	CCNGG	3 cut(s)	242, 560, 646
BmiI	GGNNCC	1 cut(s)	392
BmrFI	CCNGG	3 cut(s)	242, 560, 646
BmsI	GCATC	3 cut(s)	193, 360, 663
BpmI	CTGGAG	1 cut(s)	838
Bpu10I	CCTNAGC	1 cut(s)	875
BpuMI	CCSGG	3 cut(s)	242, 560, 646
BsaBI	GATNNNNATC	1 cut(s)	284
BsaWI	WCCGGW	1 cut(s)	682
BsaXI	ACNNNNNCTCC	2 cut(s)	707, 737
Bsc4I	CCNNNNNNNGG	3 cut(s)	188, 460, 876
Bse118I	RCCGGY	1 cut(s)	735
Bse1I	ACTGG	1 cut(s)	761
Bse21I	CCTNAGG	1 cut(s)	455
Bse3DI	GCAATG	1 cut(s)	468
Bse8I	GATNNNNATC	1 cut(s)	284
BseGI	GGATG	7 cut(s)	208, 225, 336, 375, 417, 568, 724
BseJI	GATNNNNATC	1 cut(s)	284
BseLI	CCNNNNNNNGG	3 cut(s)	188, 460, 876
BseMI	GCAATG	1 cut(s)	468
BseMII	CTCAG	1 cut(s)	37
BseNI	ACTGG	1 cut(s)	761
BseX3I	CGGCCG	1 cut(s)	737
BseXI	GCAGC	3 cut(s)	360, 512, 781
BsgI	GTGCAG	1 cut(s)	788
Bsh1285I	CGRYCG	2 cut(s)	231, 740
BshFI	GGCC	4 cut(s)	261, 735, 739, 778
BsiEI	CGRYCG	2 cut(s)	231, 740
BsiHKAI	GWGCWC	2 cut(s)	468, 690
BsiSI	CCGG	5 cut(s)	242, 560, 645, 683, 736
BslI	CCNNNNNNNGG	3 cut(s)	188, 460, 876
BsmAI	GTCTC	5 cut(s)	28, 124, 322, 448, 530
BsmBI	CGTCTC	2 cut(s)	448, 530
BsmI	GAATGC	1 cut(s)	27
BsnI	GGCC	4 cut(s)	261, 735, 739, 778
Bsp1286I	GDGCHC	3 cut(s)	52, 468, 690
Bsp143I	GATC	3 cut(s)	285, 702, 759
BspACI	CCGC	3 cut(s)	72, 231, 258
BspANI	GGCC	4 cut(s)	261, 735, 739, 778
BspCNI	CTCAG	1 cut(s)	36
BspLI	GGNNCC	1 cut(s)	392
BspMI	ACCTGC	1 cut(s)	451
BspPI	GGATC	1 cut(s)	767
BsrDI	GCAATG	1 cut(s)	468
BsrFI	RCCGGY	1 cut(s)	735
BsrI	ACTGG	1 cut(s)	761
BssAI	RCCGGY	1 cut(s)	735
BssMI	GATC	3 cut(s)	285, 702, 759
Bst4CI	ACNGT	2 cut(s)	434, 696
BstC8I	GCNNGC	3 cut(s)	70, 690, 737
BstDEI	CTNAG	3 cut(s)	23, 455, 875
BstENI	CCTNNNNNAGG	2 cut(s)	186, 458
BstF5I	GGATG	7 cut(s)	208, 225, 336, 375, 417, 568, 724
BstKTI	GATC	3 cut(s)	288, 705, 762
BstMAI	GTCTC	5 cut(s)	28, 124, 322, 448, 530
BstMBI	GATC	3 cut(s)	285, 702, 759
BstMCI	CGRYCG	2 cut(s)	231, 740
BstMWI	GCNNNNNNNGC	3 cut(s)	479, 641, 775
BstSCI	CCNGG	3 cut(s)	240, 558, 644
BstV1I	GCAGC	3 cut(s)	360, 512, 781
BstZI	CGGCCG	1 cut(s)	737
Bsu36I	CCTNAGG	1 cut(s)	455
BsuRI	GGCC	4 cut(s)	261, 735, 739, 778
BtgZI	GCGATG	1 cut(s)	342
BtsCI	GGATG	7 cut(s)	208, 225, 336, 375, 417, 568, 724
BtsI	GCAGTG	1 cut(s)	358
BtsIMutI	CAGTG	1 cut(s)	358
BveI	ACCTGC	1 cut(s)	451
Cac8I	GCNNGC	3 cut(s)	70, 690, 737
Cfr10I	RCCGGY	1 cut(s)	735
Csp6I	GTAC	1 cut(s)	63
CviQI	GTAC	1 cut(s)	63
DdeI	CTNAG	3 cut(s)	23, 455, 875
DpnI	GATC	3 cut(s)	287, 704, 761
DpnII	GATC	3 cut(s)	285, 702, 759
EaeI	YGGCCR	3 cut(s)	259, 733, 737
EagI	CGGCCG	1 cut(s)	737
EclXI	CGGCCG	1 cut(s)	737
Eco147I	AGGCCT	1 cut(s)	778
Eco24I	GRGCYC	1 cut(s)	52
Eco52I	CGGCCG	1 cut(s)	737
Eco57I	CTGAAG	1 cut(s)	199
Eco81I	CCTNAGG	1 cut(s)	455
EcoNI	CCTNNNNNAGG	2 cut(s)	186, 458
EcoRI	GAATTC	1 cut(s)	223
EcoT22I	ATGCAT	1 cut(s)	375
EcoT38I	GRGCYC	1 cut(s)	52
Esp3I	CGTCTC	2 cut(s)	448, 530
FauNDI	CATATG	1 cut(s)	532
Fnu4HI	GCNGC	4 cut(s)	259, 349, 501, 770
FokI	GGATG	7 cut(s)	215, 232, 323, 382, 404, 575, 731
FriOI	GRGCYC	1 cut(s)	52
FseI	GGCCGGCC	1 cut(s)	739
Fsp4HI	GCNGC	4 cut(s)	259, 349, 501, 770
FspBI	CTAG	1 cut(s)	780
GluI	GCNGC	4 cut(s)	259, 349, 501, 770
GsuI	CTGGAG	1 cut(s)	838
HaeIII	GGCC	4 cut(s)	261, 735, 739, 778
HapII	CCGG	5 cut(s)	242, 560, 645, 683, 736
HpaII	CCGG	5 cut(s)	242, 560, 645, 683, 736
HphI	GGTGA	2 cut(s)	89, 805
Hpy166II	GTNNAC	1 cut(s)	859
Hpy188I	TCNGA	4 cut(s)	14, 33, 866, 887
Hpy188III	TCNNGA	6 cut(s)	217, 250, 491, 602, 706, 838
Hpy8I	GTNNAC	1 cut(s)	859
Hpy99I	CGWCG	1 cut(s)	438
HpyAV	CCTTC	1 cut(s)	784
HpyCH4III	ACNGT	2 cut(s)	434, 696
HpyCH4IV	ACGT	1 cut(s)	441
HpyCH4V	TGCA	4 cut(s)	88, 373, 769, 852
HpyF10VI	GCNNNNNNNGC	3 cut(s)	479, 641, 775
HpyF3I	CTNAG	3 cut(s)	23, 455, 875
HpySE526I	ACGT	1 cut(s)	441
KroI	GCCGGC	1 cut(s)	735
KroNI	GCCGGC	1 cut(s)	737
Kzo9I	GATC	3 cut(s)	285, 702, 759
Lsp1109I	GCAGC	3 cut(s)	360, 512, 781
LweI	GCATC	3 cut(s)	193, 360, 663
MaeI	CTAG	1 cut(s)	780
MaeII	ACGT	1 cut(s)	441
MaeIII	GTNAC	4 cut(s)	74, 184, 413, 437
MalI	GATC	3 cut(s)	287, 704, 761
MboI	GATC	3 cut(s)	285, 702, 759
MboII	GAAGA	3 cut(s)	50, 205, 554
MhlI	GDGCHC	3 cut(s)	52, 468, 690
MluCI	AATT	6 cut(s)	53, 223, 306, 449, 709, 881
MnlI	CCTC	5 cut(s)	136, 217, 709, 768, 813
Mph1103I	ATGCAT	1 cut(s)	375
MroNI	GCCGGC	1 cut(s)	735
MroXI	GAANNNNTTC	1 cut(s)	806
MseI	TTAA	2 cut(s)	344, 521
MslI	CAYNNNNRTG	2 cut(s)	683, 810
MspA1I	CMGCKG	1 cut(s)	503
MspI	CCGG	5 cut(s)	242, 560, 645, 683, 736
MspR9I	CCNGG	3 cut(s)	242, 560, 646
Mva1269I	GAATGC	1 cut(s)	27
MwoI	GCNNNNNNNGC	3 cut(s)	479, 641, 775
NaeI	GCCGGC	1 cut(s)	737
NciI	CCSGG	3 cut(s)	242, 560, 646
NdeI	CATATG	1 cut(s)	532
NdeII	GATC	3 cut(s)	285, 702, 759
NgoMIV	GCCGGC	1 cut(s)	735
NlaIV	GGNNCC	1 cut(s)	392
NmuCI	GTSAC	1 cut(s)	413
NsiI	ATGCAT	1 cut(s)	375
PaqCI	CACCTGC	1 cut(s)	451
PceI	AGGCCT	1 cut(s)	778
PctI	GAATGC	1 cut(s)	27
PdiI	GCCGGC	1 cut(s)	737
PdmI	GAANNNNTTC	1 cut(s)	806
PflFI	GACNNNGTC	1 cut(s)	8
PkrI	GCNGC	4 cut(s)	260, 350, 502, 771
PsiI	TTATAA	1 cut(s)	786
PspN4I	GGNNCC	1 cut(s)	392
PsyI	GACNNNGTC	1 cut(s)	8
PvuII	CAGCTG	1 cut(s)	503
RigI	GGCCGGCC	1 cut(s)	739
RsaI	GTAC	1 cut(s)	64
RsaNI	GTAC	1 cut(s)	63
RseI	CAYNNNNRTG	2 cut(s)	683, 810
SaqAI	TTAA	2 cut(s)	344, 521
SatI	GCNGC	4 cut(s)	259, 349, 501, 770
Sau3AI	GATC	3 cut(s)	285, 702, 759
ScrFI	CCNGG	3 cut(s)	242, 560, 646
SduI	GDGCHC	3 cut(s)	52, 468, 690
SetI	ASST	7 cut(s)	444, 465, 505, 591, 624, 733, 795
SfaNI	GCATC	3 cut(s)	193, 360, 663
SmiMI	CAYNNNNRTG	2 cut(s)	683, 810
Sse9I	AATT	6 cut(s)	53, 223, 306, 449, 709, 881
SseBI	AGGCCT	1 cut(s)	778
SsiI	CCGC	3 cut(s)	72, 231, 258
SspI	AATATT	1 cut(s)	296
SspMI	CTAG	1 cut(s)	780
StuI	AGGCCT	1 cut(s)	778
StyD4I	CCNGG	3 cut(s)	240, 558, 644
TaaI	ACNGT	2 cut(s)	434, 696
TaiI	ACGT	1 cut(s)	444
TaqI	TCGA	3 cut(s)	227, 273, 475
TasI	AATT	6 cut(s)	53, 223, 306, 449, 709, 881
TauI	GCSGC	1 cut(s)	261
Tru1I	TTAA	2 cut(s)	344, 521
Tru9I	TTAA	2 cut(s)	344, 521
TscAI	CASTG	1 cut(s)	358
TseFI	GTSAC	1 cut(s)	413
TseI	GCWGC	3 cut(s)	348, 500, 769
Tsp45I	GTSAC	1 cut(s)	413
TspDTI	ATGAA	3 cut(s)	236, 621, 642
TspGWI	ACGGA	1 cut(s)	554
TspRI	CASTG	1 cut(s)	358
Tth111I	GACNNNGTC	1 cut(s)	8
XagI	CCTNNNNNAGG	2 cut(s)	186, 458
XapI	RAATTY	4 cut(s)	223, 449, 709, 881
XmnI	GAANNNNTTC	1 cut(s)	806
XspI	CTAG	1 cut(s)	780
Zsp2I	ATGCAT	1 cut(s)	375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.