Prupe.1G493900_v2.0.a1

Belongs to the peroxidase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
41042227 .. 41045442
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G493900.2

Sequence Viewer

Length: 1263 bp
ATGGCCTCCGTCGCTTTCAGCGGCGCCGCCGCTGCCGCCACTGCCGCCACCACGTCTCGGCGTCTTCCCGCCTCGGCTAAACTATCTCTCTCTCCCTCCTCCTCCTCCTCTCTCAAACTCCTCGGCTCCACTCCGATCGTTTCCCGCCTCTTCCTCAAACCCAAACGCTGCTCGGCGGCTCCGCTGCCTAGCCGAGCGTTCAGCTCAGCCGCCGCCGCTCCCAAGTGCCTCGCTTCCGACCCGGAGCAGCTGAAGCTCGCCAGAGAAGACATCAGGGAGCTTCTCAAGACCACTTTCAGCCACCCAATTCTGGTGCGGTTGGGATGGCACGATGCTGGTACTTACAACAAGAATATTGAGGAGTGGCCAAGAAGAGGTGGAGCGAATGGGAGCTTGAGGTTTGAGATTGAGCTTAAACACGCAGCCAATGCAGGTCTTGTCAATGCATTGAAGCTCATTCAGCCTTTAAAAGACAAGTACTCTGATGTAACATACGCAGACTTGTTCCAATTGGCCAGTGCTACTGCTGTTGAGGAGGCTGGGGGACCAAAGATTCCTATGAAGTATGGGAGAGTTGATGTTTCGGCACCTGAGCAGTGCCCAGAAGAAGGGAGGCTTCCTTCTGCTGGCCCTCCTTCACCTGCTGATCATCTGCGTGAGGTTTTCTACAGAATGGGGTTAAATGACAAGGAAATAGTAGCATTATCAGGGGCACACACTCTGGGGAGGTCCAGACCTGATCGCAGTGGTTGGGGCAAGCCAGAGACAAAGTACACGAAAGACGGGCCAGGGGCACCAGGAGGACAGTCTTGGACAGCACAATGGTTGAAGTTTGATAATTCCTACTTCACGGATATCAAGGAAAAGAAGGATGAAGATCTTCTGGTGTTGCCAACTGATGGTGTTCTTTTCGAAGATCCAGCATTCAAGGTATATGCTGAGAAATATGCTGAAGACCAAGAAGCGTTCTTCAAGGATTATGCTGAAGCTCATGCTAAACTCAGCAACCTGGGAGCCAAATTTGATCCTCCAGAGGGTATTGTGATCGATGATGGTCCTTCACAGCCAGTACCAGAAAAGTTTGTGGCAGCCAAATACTCGTCTGGCAAGAGAGAGCTGTCAGAGAATATGAAGCAGAAGATTCGGGCAGAGTATCAAGCTGTTGGTGGAAGCCCAGATAAACCTCTACAGTCTAATTATTTTCTGAACATTATAATCGTGATTGGGGTTTTGGCACTTTTGACATCGTTGGTTGGAAACTAA

Protein Analysis

421

Amino Acids

45.43

Weight (kDa)

8.48

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1214
AarI CACCTGC 1 cut(s) 649
Acc36I ACCTGC 2 cut(s) 422, 649
AccB1I GGYRCC 3 cut(s) 23, 586, 793
AccB7I CCANNNNNTGG 1 cut(s) 899
AccBSI CCGCTC 1 cut(s) 218
AclWI GGATC 2 cut(s) 911, 1019
AcoI YGGCCR 2 cut(s) 365, 513
AcsI RAATTY 1 cut(s) 1019
AcuI CTGAAG 3 cut(s) 272, 972, 1005
AcyI GRCGYC 2 cut(s) 24, 61
AfaI GTAC 4 cut(s) 340, 479, 773, 1071
AfiI CCNNNNNNNGG 7 cut(s) 57, 310, 374, 608, 626, 899, 1034
AgsI TTSAA 4 cut(s) 451, 829, 928, 973
AjiI CACGTC 1 cut(s) 54
AjnI CCWGG 3 cut(s) 787, 796, 1008
Alw26I GTCTC 2 cut(s) 60, 758
AlwI GGATC 2 cut(s) 911, 1019
AoxI GGCC 5 cut(s) 3, 365, 513, 628, 785
ApeKI GCWGC 6 cut(s) 32, 168, 184, 247, 422, 1088
ApoI RAATTY 1 cut(s) 1019
Asp700I GAANNNNTTC 1 cut(s) 879
AspLEI GCGC 1 cut(s) 26
AspS9I GGNCC 5 cut(s) 545, 629, 729, 785, 1055
AsuC2I CCSGG 1 cut(s) 242
AsuHPI GGTGA 1 cut(s) 630
AsuII TTCGAA 1 cut(s) 912
AvaII GGWCC 3 cut(s) 545, 729, 1055
BaeGI GKGCMC 3 cut(s) 602, 715, 796
BalI TGGCCA 2 cut(s) 367, 515
BanI GGYRCC 3 cut(s) 23, 586, 793
BbsI GAAGAC 3 cut(s) 56, 273, 960
BbvI GCAGC 6 cut(s) 19, 155, 171, 259, 434, 1100
BccI CCATC 3 cut(s) 318, 893, 1046
BcgI CGANNNNNNTGC 2 cut(s) 1124, 1158
BciT130I CCWGG 3 cut(s) 789, 798, 1010
BclI TGATCA 1 cut(s) 646
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 2 cut(s) 60, 758
BfaI CTAG 1 cut(s) 189
BfmI CTRYAG 2 cut(s) 667, 1187
BfoI RGCGCY 1 cut(s) 27
BfuAI ACCTGC 2 cut(s) 422, 649
BglII AGATCT 1 cut(s) 877
BlpI GCTNAGC 1 cut(s) 205
BmcAI AGTACT 1 cut(s) 479
Bme1390I CCNGG 4 cut(s) 242, 789, 798, 1010
Bme18I GGWCC 3 cut(s) 545, 729, 1055
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 5 cut(s) 545, 629, 729, 785, 1055
BmiI GGNNCC 7 cut(s) 25, 127, 180, 546, 588, 795, 1015
BmrFI CCNGG 4 cut(s) 242, 789, 798, 1010
BmsI GCATC 1 cut(s) 322
BpiI GAAGAC 3 cut(s) 56, 273, 960
BpmI CTGGAG 1 cut(s) 1014
Bpu10I CCTNAGC 1 cut(s) 591
Bpu1102I GCTNAGC 1 cut(s) 205
Bpu14I TTCGAA 1 cut(s) 912
BpuEI CTTGAG 2 cut(s) 269, 415
BpuMI CCSGG 1 cut(s) 242
Bsa29I ATCGAT 1 cut(s) 1047
BsaBI GATNNNNATC 1 cut(s) 876
BsaHI GRCGYC 2 cut(s) 24, 61
BsaJI CCNNGG 4 cut(s) 72, 121, 788, 1009
Bsc4I CCNNNNNNNGG 7 cut(s) 57, 310, 374, 608, 626, 899, 1034
Bse1I ACTGG 2 cut(s) 516, 1067
Bse8I GATNNNNATC 1 cut(s) 876
BseBI CCWGG 3 cut(s) 789, 798, 1010
BseCI ATCGAT 1 cut(s) 1047
BseDI CCNNGG 4 cut(s) 72, 121, 788, 1009
BseGI GGATG 2 cut(s) 329, 877
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 7 cut(s) 57, 310, 374, 608, 626, 899, 1034
BseMII CTCAG 4 cut(s) 219, 582, 930, 1015
BseNI ACTGG 2 cut(s) 516, 1067
BseRI GAGGAG 7 cut(s) 88, 91, 94, 97, 110, 374, 548
BseSI GKGCMC 3 cut(s) 602, 715, 796
BseXI GCAGC 6 cut(s) 19, 155, 171, 259, 434, 1100
BseYI CCCAGC 1 cut(s) 539
Bsh1285I CGRYCG 1 cut(s) 138
BshFI GGCC 5 cut(s) 5, 367, 515, 630, 787
BshNI GGYRCC 3 cut(s) 23, 586, 793
BshVI ATCGAT 1 cut(s) 1047
BsiEI CGRYCG 1 cut(s) 138
BsiSI CCGG 1 cut(s) 242
BslFI GGGAC 1 cut(s) 558
BslI CCNNNNNNNGG 7 cut(s) 57, 310, 374, 608, 626, 899, 1034
BsmAI GTCTC 2 cut(s) 60, 758
BsmBI CGTCTC 1 cut(s) 60
BsmFI GGGAC 1 cut(s) 558
BsmI GAATGC 1 cut(s) 923
BsnI GGCC 5 cut(s) 5, 367, 515, 630, 787
Bsp119I TTCGAA 1 cut(s) 912
Bsp1286I GDGCHC 3 cut(s) 602, 715, 796
Bsp143I GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
Bsp1720I GCTNAGC 1 cut(s) 205
BspANI GGCC 5 cut(s) 5, 367, 515, 630, 787
BspCNI CTCAG 4 cut(s) 218, 583, 931, 1014
BspDI ATCGAT 1 cut(s) 1047
BspLI GGNNCC 7 cut(s) 25, 127, 180, 546, 588, 795, 1015
BspMI ACCTGC 2 cut(s) 422, 649
BspPI GGATC 2 cut(s) 911, 1019
BspT104I TTCGAA 1 cut(s) 912
BspT107I GGYRCC 3 cut(s) 23, 586, 793
BsrBI CCGCTC 1 cut(s) 218
BsrI ACTGG 2 cut(s) 516, 1067
BssECI CCNNGG 4 cut(s) 72, 121, 788, 1009
BssMI GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
BssNI GRCGYC 2 cut(s) 24, 61
Bst2UI CCWGG 3 cut(s) 789, 798, 1010
Bst4CI ACNGT 2 cut(s) 807, 1191
Bst6I CTCTTC 2 cut(s) 155, 367
BstACI GRCGYC 2 cut(s) 24, 61
BstAPI GCANNNNNTGC 1 cut(s) 428
BstBI TTCGAA 1 cut(s) 912
BstC8I GCNNGC 3 cut(s) 258, 628, 758
BstDEI CTNAG 4 cut(s) 205, 591, 939, 1001
BstF5I GGATG 2 cut(s) 329, 877
BstH2I RGCGCY 1 cut(s) 27
BstHHI GCGC 1 cut(s) 26
BstKTI GATC 7 cut(s) 138, 649, 742, 880, 919, 1027, 1047
BstMAI GTCTC 2 cut(s) 60, 758
BstMBI GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
BstMCI CGRYCG 1 cut(s) 138
BstMWI GCNNNNNNNGC 9 cut(s) 11, 32, 35, 41, 44, 215, 253, 428, 460
BstNI CCWGG 3 cut(s) 789, 798, 1010
BstSCI CCNGG 4 cut(s) 240, 787, 796, 1008
BstSFI CTRYAG 2 cut(s) 667, 1187
BstSLI GKGCMC 3 cut(s) 602, 715, 796
BstV1I GCAGC 6 cut(s) 19, 155, 171, 259, 434, 1100
BstV2I GAAGAC 3 cut(s) 56, 273, 960
BstX2I RGATCY 2 cut(s) 877, 916
BstYI RGATCY 2 cut(s) 877, 916
Bsu15I ATCGAT 1 cut(s) 1047
BsuRI GGCC 5 cut(s) 5, 367, 515, 630, 787
BsuTUI ATCGAT 1 cut(s) 1047
BtrI CACGTC 1 cut(s) 54
BtsCI GGATG 2 cut(s) 329, 877
BtsI GCAGTG 3 cut(s) 39, 602, 751
BtsIMutI CAGTG 4 cut(s) 39, 523, 602, 751
BveI ACCTGC 2 cut(s) 422, 649
Cac8I GCNNGC 3 cut(s) 258, 628, 758
CfoI GCGC 1 cut(s) 26
Cfr13I GGNCC 5 cut(s) 545, 629, 729, 785, 1055
ClaI ATCGAT 1 cut(s) 1047
CseI GACGC 1 cut(s) 50
Csp6I GTAC 4 cut(s) 339, 478, 772, 1070
CviAII CATG 1 cut(s) 992
CviQI GTAC 4 cut(s) 339, 478, 772, 1070
DdeI CTNAG 4 cut(s) 205, 591, 939, 1001
DinI GGCGCC 1 cut(s) 25
DpnI GATC 7 cut(s) 137, 648, 741, 879, 918, 1026, 1046
DpnII GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
DraI TTTAAA 1 cut(s) 468
EaeI YGGCCR 2 cut(s) 365, 513
Eam1104I CTCTTC 2 cut(s) 155, 367
EarI CTCTTC 2 cut(s) 155, 367
Eco32I GATATC 1 cut(s) 856
Eco47I GGWCC 3 cut(s) 545, 729, 1055
Eco57I CTGAAG 3 cut(s) 272, 972, 1005
EcoRII CCWGG 3 cut(s) 787, 796, 1008
EcoRV GATATC 1 cut(s) 856
EcoT22I ATGCAT 1 cut(s) 448
EgeI GGCGCC 1 cut(s) 25
EheI GGCGCC 1 cut(s) 25
Esp3I CGTCTC 1 cut(s) 60
FaeI CATG 1 cut(s) 995
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FaqI GGGAC 1 cut(s) 558
FatI CATG 1 cut(s) 991
FauI CCCGC 2 cut(s) 76, 152
FbaI TGATCA 1 cut(s) 646
FokI GGATG 2 cut(s) 336, 884
FspBI CTAG 1 cut(s) 189
GlaI GCGC 1 cut(s) 25
GsaI CCCAGC 1 cut(s) 543
GsuI CTGGAG 1 cut(s) 1014
HaeII RGCGCY 1 cut(s) 27
HaeIII GGCC 5 cut(s) 5, 367, 515, 630, 787
HapII CCGG 1 cut(s) 242
HgaI GACGC 1 cut(s) 50
HhaI GCGC 1 cut(s) 26
Hin1I GRCGYC 2 cut(s) 24, 61
Hin1II CATG 1 cut(s) 995
Hin6I GCGC 1 cut(s) 24
HinP1I GCGC 1 cut(s) 24
HinfI GANTC 2 cut(s) 553, 1141
HpaII CCGG 1 cut(s) 242
HphI GGTGA 1 cut(s) 630
Hpy166II GTNNAC 1 cut(s) 774
Hpy188I TCNGA 5 cut(s) 135, 238, 484, 1123, 1206
Hpy188III TCNNGA 4 cut(s) 286, 732, 1031, 1219
Hpy8I GTNNAC 1 cut(s) 774
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 5 cut(s) 602, 630, 645, 862, 1068
HpyCH4III ACNGT 2 cut(s) 807, 1191
HpyCH4IV ACGT 1 cut(s) 53
HpyCH4V TGCA 2 cut(s) 431, 446
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 32, 35, 41, 44, 215, 253, 428, 460
HpyF3I CTNAG 4 cut(s) 205, 591, 939, 1001
HpySE526I ACGT 1 cut(s) 53
Hsp92I GRCGYC 2 cut(s) 24, 61
Hsp92II CATG 1 cut(s) 995
HspAI GCGC 1 cut(s) 24
KasI GGCGCC 1 cut(s) 23
Ksp22I TGATCA 1 cut(s) 646
Kzo9I GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
LmnI GCTCC 8 cut(s) 131, 184, 223, 244, 277, 380, 390, 1013
Lsp1109I GCAGC 6 cut(s) 19, 155, 171, 259, 434, 1100
LweI GCATC 1 cut(s) 322
MaeI CTAG 1 cut(s) 189
MaeII ACGT 1 cut(s) 53
MaeIII GTNAC 1 cut(s) 487
MalI GATC 7 cut(s) 137, 648, 741, 879, 918, 1026, 1046
MbiI CCGCTC 1 cut(s) 218
MboI GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
MfeI CAATTG 1 cut(s) 509
MflI RGATCY 2 cut(s) 877, 916
MhlI GDGCHC 3 cut(s) 602, 715, 796
MlsI TGGCCA 2 cut(s) 367, 515
MluCI AATT 5 cut(s) 306, 509, 838, 1019, 1195
MluNI TGGCCA 2 cut(s) 367, 515
Mly113I GGCGCC 1 cut(s) 24
MmeI TCCRAC 2 cut(s) 261, 1234
Mox20I TGGCCA 2 cut(s) 367, 515
Mph1103I ATGCAT 1 cut(s) 448
MroXI GAANNNNTTC 1 cut(s) 879
MscI TGGCCA 2 cut(s) 367, 515
MseI TTAA 3 cut(s) 414, 467, 680
MslI CAYNNNNRTG 1 cut(s) 654
Msp20I TGGCCA 2 cut(s) 367, 515
MspA1I CMGCKG 4 cut(s) 21, 32, 184, 250
MspI CCGG 1 cut(s) 242
MspR9I CCNGG 4 cut(s) 242, 789, 798, 1010
MunI CAATTG 1 cut(s) 509
Mva1269I GAATGC 1 cut(s) 923
MvaI CCWGG 3 cut(s) 789, 798, 1010
MwoI GCNNNNNNNGC 9 cut(s) 11, 32, 35, 41, 44, 215, 253, 428, 460
NarI GGCGCC 1 cut(s) 24
NciI CCSGG 1 cut(s) 242
NdeII GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
NlaIII CATG 1 cut(s) 995
NlaIV GGNNCC 7 cut(s) 25, 127, 180, 546, 588, 795, 1015
NmeAIII GCCGAG 5 cut(s) 37, 53, 102, 152, 218
NsiI ATGCAT 1 cut(s) 448
NspV TTCGAA 1 cut(s) 912
PaqCI CACCTGC 1 cut(s) 649
PctI GAATGC 1 cut(s) 923
PdmI GAANNNNTTC 1 cut(s) 879
PfeI GAWTC 2 cut(s) 553, 1141
PflMI CCANNNNNTGG 1 cut(s) 899
Ple19I CGATCG 1 cut(s) 138
PluTI GGCGCC 1 cut(s) 27
PsiI TTATAA 1 cut(s) 1214
Psp6I CCWGG 3 cut(s) 787, 796, 1008
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 3 cut(s) 787, 796, 1008
PspN4I GGNNCC 7 cut(s) 25, 127, 180, 546, 588, 795, 1015
PspPI GGNCC 5 cut(s) 545, 629, 729, 785, 1055
PsuI RGATCY 2 cut(s) 877, 916
PvuI CGATCG 1 cut(s) 138
PvuII CAGCTG 1 cut(s) 250
RsaI GTAC 4 cut(s) 340, 479, 773, 1071
RsaNI GTAC 4 cut(s) 339, 478, 772, 1070
RseI CAYNNNNRTG 1 cut(s) 654
SaqAI TTAA 3 cut(s) 414, 467, 680
Sau3AI GATC 7 cut(s) 135, 646, 739, 877, 916, 1024, 1044
Sau96I GGNCC 5 cut(s) 545, 629, 729, 785, 1055
ScaI AGTACT 1 cut(s) 479
ScrFI CCNGG 4 cut(s) 242, 789, 798, 1010
SduI GDGCHC 3 cut(s) 602, 715, 796
SfaNI GCATC 1 cut(s) 322
SfcI CTRYAG 2 cut(s) 667, 1187
SfoI GGCGCC 1 cut(s) 25
SfuI TTCGAA 1 cut(s) 912
SinI GGWCC 3 cut(s) 545, 729, 1055
SmiMI CAYNNNNRTG 1 cut(s) 654
SmlI CTYRAG 2 cut(s) 284, 394
SmoI CTYRAG 2 cut(s) 284, 394
Sse9I AATT 5 cut(s) 306, 509, 838, 1019, 1195
SspDI GGCGCC 1 cut(s) 23
SspI AATATT 1 cut(s) 355
SspMI CTAG 1 cut(s) 189
StyD4I CCNGG 4 cut(s) 240, 787, 796, 1008
TaaI ACNGT 2 cut(s) 807, 1191
TaiI ACGT 1 cut(s) 56
TaqI TCGA 2 cut(s) 912, 1047
TasI AATT 5 cut(s) 306, 509, 838, 1019, 1195
TatI WGTACW 2 cut(s) 477, 771
TauI GCSGC 9 cut(s) 24, 29, 32, 38, 47, 179, 212, 215, 218
TfiI GAWTC 2 cut(s) 553, 1141
Tru1I TTAA 3 cut(s) 414, 467, 680
Tru9I TTAA 3 cut(s) 414, 467, 680
TscAI CASTG 4 cut(s) 46, 523, 602, 751
TseI GCWGC 6 cut(s) 32, 168, 184, 247, 422, 1088
TspDTI ATGAA 3 cut(s) 575, 888, 1145
TspGWI ACGGA 1 cut(s) 866
TspRI CASTG 4 cut(s) 46, 523, 602, 751
Van91I CCANNNNNTGG 1 cut(s) 899
VpaK11BI GGWCC 3 cut(s) 545, 729, 1055
XapI RAATTY 1 cut(s) 1019
XmnI GAANNNNTTC 1 cut(s) 879
XspI CTAG 1 cut(s) 189
ZrmI AGTACT 1 cut(s) 479
Zsp2I ATGCAT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.