Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0005692

Physical Location & Seq

Genomic Coordinates Reverse (-)

57099338 .. 57102632

Gene Structure 3295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG384400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGCACACCATCACGGTCTTCTCTCCCCGTCACTCCCAACAACTCCAACAGCATCCCACTCCCAAATTCACACTTCCCTTTCCTCTTCTTCTTCTTCAACTCCAGCCATGGCCTCCGTCGCTCTCGGCGGCGCCGCCGCTGCTACCTCTACTCGCTGCCTCCTCCCCTCCGCCAGAGCCTCCCTCTCACTGTCTCGCTCTTCTCCTTCGTCTCTCAAATGCCGAGGCCTTGGCTCTTCTCCGCTCATCTCTCACCTCTTCCTCAGCCGCAAAGCCTCGCCGATGGCTTGCTCCTCCAGCCGCGGCTTCGCCGCCGCTCCGAAATGCGCGGCTTCCGATCCCGAGCAGCTCAAGCTTGCGAAGGAGGACATCAAGGAGCTCCTCAAGACTAAGTTCTGCCATCCAATTCTGGTTCGGCTGGGATGGCACGATTCTGGAACTTACAACAAGAACATTGAGGAGTGGCCGCGGAGAGGTGGAGCTAATGGGAGCTTGAGGTTTGAGATTGAGCTTAAGCACGCCGCTAATGCAGGTCTTGTGAATGCTTTGAAGCTTATTCAGCCTATCAAGGACAAGTACTCTGGTGTCACATACGCAGACTTGTTCCAATTGGCTAGTGCTAGCGCTGTGGAGGATGCTGGGGGCCCAAAGATTCCTATGAAGTATGGGAGAGTTGATGTTTCAGCACCAGAGCAGTGCCCAGAAGAAGGAAGGCTTCCTGATGCCGGCCCCCCTTCACCTGCTGATCATCTACGTGAGGTGTTCTACAGAATGGGGTTAAATGACAAGGAAATAGTTGCATTATCAGGGGCACACACTCTGGGGAGGTCCAGACCTGAACGCAGTGGTTGGGGCAAGCCAGAGACAAAGTATACGAAAGAAGGGCCAGGTGCACCAGGAGGACAGTCTTGGACAGCACAATGGTTGAAGTTTGATAATTCCTACTTCAAGGATATCAAGGAAAAAAGGGATGAAGATCTACTAGTGTTGCCAACTGATGCTGCTCTTTTTGAAGACCCATCATTCAAGGTATTTGCTGAGAAGTATGCTGAAGATCAAGAAGCCTTCTTCAAGGACTATGCTGAAGCTCATGCTAAACTCAGCAATTTAGGAGCCAAATTTGATCCTCCAGAGGGTATTGTGATCGATGATGGTGCACAACCTGTACCGGAAAAGTTTGTGGCAGCTAAATACTCATCTGGCAAGAGAGAGCTATCAGACTCTATGAAGCAGAAGATCCGGGCAGAGTATCAAGCTATTGGTGGAAGCCCAGATAAGCCTCTACAGACAAACTACTTTCTAAATATAATAATTGTAATATCTGTTTTGGCAATTTTGACATCACTATTTGGAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009409 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009631 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010019 GO:0010033 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016999 GO:0017001 GO:0017144 GO:0023052 GO:0031976 GO:0031984 GO:0033554 GO:0034357 GO:0034599 GO:0042221 GO:0042651 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055035 GO:0055114 GO:0065007 GO:0070887 GO:0071588 GO:0072593 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

452

Amino Acids

48.74

Weight (kDa)

8.54

Isoelectric Point (pI)

50.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	121 - 352	3.8e-45	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005692)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77490 AT1G77490 AT4G08390 AT4G08390 AT4G08390 AT4G08390 AT4G08390
fragaria_vesca	FvH4_2g27340 FvH4_2g27340 FvH4_2g27340 FvH4_2g27340
malus_domestica	MD00G1029300.v1.1
prunus_persica	Prupe.1G493900_v2.0.a1 Prupe.1G493900_v2.0.a1
pyrus_communis	pycom15g31010
rosa_chinensis	RchiOBHm_Chr6g0296151
rosa_laevigata	RLG00000011722
rosa_multiflora	Rmu_sc0000486.1_g000008 Rmu_sc0012446.1_g000003
rosa_roxburghii	Rroxscaffold_7G00171790 Rroxscaffold_7G00178270
rosa_rugosa	Rorug06G0258900.1 Rorug06G0259000
rosa_samantha	Rh6AG371200 Rh6BG379100 Rh6CG384400 Rh6DG371700
rosa_wichuraiana	Rw6G032330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	748
Acc36I	ACCTGC	2 cut(s)	521, 748
AccB1I	GGYRCC	1 cut(s)	131
AccBSI	CCGCTC	2 cut(s)	244, 317
AccI	GTMKAC	1 cut(s)	872
AccII	CGCG	3 cut(s)	303, 329, 469
AclWI	GGATC	3 cut(s)	332, 1118, 1231
AcoI	YGGCCR	1 cut(s)	464
AcsI	RAATTY	2 cut(s)	66, 1118
AcuI	CTGAAG	2 cut(s)	1071, 1104
AcyI	GRCGYC	1 cut(s)	132
AfaI	GTAC	2 cut(s)	578, 1167
AfeI	AGCGCT	1 cut(s)	625
AfiI	CCNNNNNNNGG	4 cut(s)	473, 707, 725, 1133
AflII	CTTAAG	1 cut(s)	512
AgsI	TTSAA	7 cut(s)	99, 550, 928, 949, 1013, 1027, 1072
AhlI	ACTAGT	1 cut(s)	982
AjnI	CCWGG	2 cut(s)	886, 895
Alw21I	GWGCWC	3 cut(s)	381, 895, 1159
Alw26I	GTCTC	3 cut(s)	198, 216, 857
Alw44I	GTGCAC	2 cut(s)	891, 1155
AlwI	GGATC	3 cut(s)	332, 1118, 1231
Ama87I	CYCGRG	1 cut(s)	341
Aor51HI	AGCGCT	1 cut(s)	625
AoxI	GGCC	6 cut(s)	111, 226, 464, 643, 727, 884
ApaI	GGGCCC	1 cut(s)	647
ApaLI	GTGCAC	2 cut(s)	891, 1155
ApeKI	GCWGC	5 cut(s)	140, 156, 346, 1001, 1184
ApoI	RAATTY	2 cut(s)	66, 1118
AspLEI	GCGC	3 cut(s)	134, 329, 626
AspS9I	GGNCC	5 cut(s)	643, 644, 728, 828, 884
AsuC2I	CCSGG	1 cut(s)	1241
AsuHPI	GGTGA	2 cut(s)	245, 729
AsuNHI	GCTAGC	1 cut(s)	620
AvaI	CYCGRG	1 cut(s)	341
AvaII	GGWCC	1 cut(s)	828
BaeGI	GKGCMC	5 cut(s)	647, 701, 814, 895, 1159
BanI	GGYRCC	1 cut(s)	131
BanII	GRGCYC	2 cut(s)	381, 647
BbsI	GAAGAC	2 cut(s)	11, 1020
Bbv12I	GWGCWC	3 cut(s)	381, 895, 1159
BbvCI	CCTCAGC	1 cut(s)	263
BbvI	GCAGC	5 cut(s)	127, 143, 358, 988, 1196
BccI	CCATC	6 cut(s)	18, 277, 408, 417, 1027, 1145
BcgI	CGANNNNNNTGC	2 cut(s)	1136, 1170
BciT130I	CCWGG	2 cut(s)	888, 897
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	1 cut(s)	1241
BcoDI	GTCTC	3 cut(s)	198, 216, 857
BcuI	ACTAGT	1 cut(s)	982
BfaI	CTAG	3 cut(s)	615, 621, 983
BfmI	CTRYAG	2 cut(s)	766, 1283
BfoI	RGCGCY	2 cut(s)	135, 627
BfrI	CTTAAG	1 cut(s)	512
BfuAI	ACCTGC	2 cut(s)	521, 748
BglII	AGATCT	1 cut(s)	976
BmcAI	AGTACT	1 cut(s)	578
Bme1390I	CCNGG	3 cut(s)	888, 897, 1241
Bme18I	GGWCC	1 cut(s)	828
BmeT110I	CYCGRG	1 cut(s)	341
BmgT120I	GGNCC	5 cut(s)	643, 644, 728, 828, 884
BmiI	GGNNCC	5 cut(s)	133, 644, 645, 730, 1114
BmrFI	CCNGG	3 cut(s)	888, 897, 1241
BmsI	GCATC	4 cut(s)	62, 625, 712, 988
BmtI	GCTAGC	1 cut(s)	624
BpiI	GAAGAC	2 cut(s)	11, 1020
BplI	GAGNNNNNCTC	2 cut(s)	168, 200
BpmI	CTGGAG	3 cut(s)	87, 280, 1113
Bpu10I	CCTNAGC	1 cut(s)	263
BpuEI	CTTGAG	3 cut(s)	335, 368, 514
BpuMI	CCSGG	1 cut(s)	1241
Bsa29I	ATCGAT	1 cut(s)	1146
BsaAI	YACGTR	1 cut(s)	755
BsaBI	GATNNNNATC	1 cut(s)	975
BsaHI	GRCGYC	1 cut(s)	132
BsaJI	CCNNGG	5 cut(s)	108, 223, 229, 301, 467
BsaWI	WCCGGW	1 cut(s)	1168
Bsc4I	CCNNNNNNNGG	4 cut(s)	473, 707, 725, 1133
Bse118I	RCCGGY	1 cut(s)	725
Bse8I	GATNNNNATC	1 cut(s)	975
BseBI	CCWGG	2 cut(s)	888, 897
BseCI	ATCGAT	1 cut(s)	1146
BseDI	CCNNGG	5 cut(s)	108, 223, 229, 301, 467
BseGI	GGATG	5 cut(s)	53, 400, 428, 640, 976
BseJI	GATNNNNATC	1 cut(s)	975
BseLI	CCNNNNNNNGG	4 cut(s)	473, 707, 725, 1133
BseMII	CTCAG	3 cut(s)	277, 1029, 1114
BseRI	GAGGAG	4 cut(s)	152, 283, 371, 473
BseSI	GKGCMC	5 cut(s)	647, 701, 814, 895, 1159
BseXI	GCAGC	5 cut(s)	127, 143, 358, 988, 1196
BseYI	CCCAGC	2 cut(s)	418, 638
Bsh1236I	CGCG	3 cut(s)	303, 329, 469
BshFI	GGCC	6 cut(s)	113, 228, 466, 645, 729, 886
BshNI	GGYRCC	1 cut(s)	131
BshVI	ATCGAT	1 cut(s)	1146
BsiHKAI	GWGCWC	3 cut(s)	381, 895, 1159
BsiHKCI	CYCGRG	1 cut(s)	341
BsiSI	CCGG	3 cut(s)	726, 1169, 1240
BslI	CCNNNNNNNGG	4 cut(s)	473, 707, 725, 1133
BsmAI	GTCTC	3 cut(s)	198, 216, 857
BsmBI	CGTCTC	1 cut(s)	216
BsmI	GAATGC	1 cut(s)	547
BsnI	GGCC	6 cut(s)	113, 228, 466, 645, 729, 886
BsoBI	CYCGRG	1 cut(s)	341
Bsp120I	GGGCCC	1 cut(s)	643
Bsp1286I	GDGCHC	6 cut(s)	381, 647, 701, 814, 895, 1159
Bsp143I	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
Bsp19I	CCATGG	1 cut(s)	108
BspANI	GGCC	6 cut(s)	113, 228, 466, 645, 729, 886
BspCNI	CTCAG	3 cut(s)	276, 1030, 1113
BspDI	ATCGAT	1 cut(s)	1146
BspFNI	CGCG	3 cut(s)	303, 329, 469
BspLI	GGNNCC	5 cut(s)	133, 644, 645, 730, 1114
BspMI	ACCTGC	2 cut(s)	521, 748
BspOI	GCTAGC	1 cut(s)	624
BspPI	GGATC	3 cut(s)	332, 1118, 1231
BspQI	GCTCTTC	2 cut(s)	205, 241
BspT107I	GGYRCC	1 cut(s)	131
BspTI	CTTAAG	1 cut(s)	512
BsrBI	CCGCTC	2 cut(s)	244, 317
BsrFI	RCCGGY	1 cut(s)	725
BssAI	RCCGGY	1 cut(s)	725
BssECI	CCNNGG	5 cut(s)	108, 223, 229, 301, 467
BssMI	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
BssNAI	GTATAC	1 cut(s)	873
BssNI	GRCGYC	1 cut(s)	132
BssT1I	CCWWGG	2 cut(s)	108, 229
Bst1107I	GTATAC	1 cut(s)	873
Bst2UI	CCWGG	2 cut(s)	888, 897
Bst4CI	ACNGT	3 cut(s)	17, 192, 906
Bst6I	CTCTTC	4 cut(s)	91, 205, 241, 263
BstACI	GRCGYC	1 cut(s)	132
BstAFI	CTTAAG	1 cut(s)	512
BstBAI	YACGTR	1 cut(s)	755
BstC8I	GCNNGC	6 cut(s)	289, 357, 519, 622, 727, 857
BstDEI	CTNAG	4 cut(s)	263, 390, 1038, 1100
BstDSI	CCRYGG	3 cut(s)	108, 301, 467
BstF5I	GGATG	5 cut(s)	53, 400, 428, 640, 976
BstFNI	CGCG	3 cut(s)	303, 329, 469
BstH2I	RGCGCY	2 cut(s)	135, 627
BstHHI	GCGC	3 cut(s)	134, 329, 626
BstKTI	GATC	7 cut(s)	340, 748, 979, 1057, 1126, 1146, 1239
BstMAI	GTCTC	3 cut(s)	198, 216, 857
BstMBI	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
BstMWI	GCNNNNNNNGC	7 cut(s)	119, 140, 297, 352, 424, 527, 559
BstNI	CCWGG	2 cut(s)	888, 897
BstSCI	CCNGG	3 cut(s)	886, 895, 1239
BstSFI	CTRYAG	2 cut(s)	766, 1283
BstSLI	GKGCMC	5 cut(s)	647, 701, 814, 895, 1159
BstUI	CGCG	3 cut(s)	303, 329, 469
BstV1I	GCAGC	5 cut(s)	127, 143, 358, 988, 1196
BstV2I	GAAGAC	2 cut(s)	11, 1020
BstX2I	RGATCY	2 cut(s)	976, 1236
BstYI	RGATCY	2 cut(s)	976, 1236
BstZ17I	GTATAC	1 cut(s)	873
Bsu15I	ATCGAT	1 cut(s)	1146
BsuRI	GGCC	6 cut(s)	113, 228, 466, 645, 729, 886
BsuTUI	ATCGAT	1 cut(s)	1146
BtgI	CCRYGG	3 cut(s)	108, 301, 467
BtsCI	GGATG	5 cut(s)	53, 400, 428, 640, 976
BtsI	GCAGTG	2 cut(s)	701, 850
BtsIMutI	CAGTG	3 cut(s)	188, 701, 850
BveI	ACCTGC	2 cut(s)	521, 748
Cac8I	GCNNGC	6 cut(s)	289, 357, 519, 622, 727, 857
CfoI	GCGC	3 cut(s)	134, 329, 626
Cfr10I	RCCGGY	1 cut(s)	725
Cfr13I	GGNCC	5 cut(s)	643, 644, 728, 828, 884
Cfr42I	CCGCGG	2 cut(s)	304, 470
ClaI	ATCGAT	1 cut(s)	1146
Csp6I	GTAC	2 cut(s)	577, 1166
CviAII	CATG	2 cut(s)	109, 1091
CviQI	GTAC	2 cut(s)	577, 1166
DdeI	CTNAG	4 cut(s)	263, 390, 1038, 1100
DinI	GGCGCC	1 cut(s)	133
DpnI	GATC	7 cut(s)	339, 747, 978, 1056, 1125, 1145, 1238
DpnII	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
EaeI	YGGCCR	1 cut(s)	464
Eam1104I	CTCTTC	4 cut(s)	91, 205, 241, 263
EarI	CTCTTC	4 cut(s)	91, 205, 241, 263
EciI	GGCGGA	1 cut(s)	160
Ecl136II	GAGCTC	1 cut(s)	379
Eco130I	CCWWGG	2 cut(s)	108, 229
Eco147I	AGGCCT	1 cut(s)	228
Eco24I	GRGCYC	2 cut(s)	381, 647
Eco32I	GATATC	1 cut(s)	955
Eco47I	GGWCC	1 cut(s)	828
Eco47III	AGCGCT	1 cut(s)	625
Eco53kI	GAGCTC	1 cut(s)	379
Eco57I	CTGAAG	2 cut(s)	1071, 1104
Eco88I	CYCGRG	1 cut(s)	341
EcoICRI	GAGCTC	1 cut(s)	379
EcoO109I	RGGNCCY	1 cut(s)	643
EcoRII	CCWGG	2 cut(s)	886, 895
EcoRV	GATATC	1 cut(s)	955
EcoT14I	CCWWGG	2 cut(s)	108, 229
EcoT38I	GRGCYC	2 cut(s)	381, 647
EgeI	GGCGCC	1 cut(s)	133
EheI	GGCGCC	1 cut(s)	133
ErhI	CCWWGG	2 cut(s)	108, 229
Esp3I	CGTCTC	1 cut(s)	216
FaeI	CATG	2 cut(s)	112, 1094
FalI	AAGNNNNNCTT	2 cut(s)	699, 731
FatI	CATG	2 cut(s)	108, 1090
FbaI	TGATCA	1 cut(s)	745
FblI	GTMKAC	1 cut(s)	872
FokI	GGATG	5 cut(s)	40, 387, 435, 647, 983
FriOI	GRGCYC	2 cut(s)	381, 647
FspBI	CTAG	3 cut(s)	615, 621, 983
GlaI	GCGC	3 cut(s)	133, 328, 625
GsaI	CCCAGC	2 cut(s)	422, 642
GsuI	CTGGAG	3 cut(s)	87, 280, 1113
HaeII	RGCGCY	2 cut(s)	135, 627
HaeIII	GGCC	6 cut(s)	113, 228, 466, 645, 729, 886
HapII	CCGG	3 cut(s)	726, 1169, 1240
HhaI	GCGC	3 cut(s)	134, 329, 626
Hin1I	GRCGYC	1 cut(s)	132
Hin1II	CATG	2 cut(s)	112, 1094
Hin6I	GCGC	3 cut(s)	132, 327, 624
HinP1I	GCGC	3 cut(s)	132, 327, 624
HindIII	AAGCTT	2 cut(s)	353, 551
HinfI	GANTC	3 cut(s)	431, 652, 1220
HpaII	CCGG	3 cut(s)	726, 1169, 1240
HphI	GGTGA	2 cut(s)	245, 729
Hpy166II	GTNNAC	3 cut(s)	873, 893, 1157
Hpy188I	TCNGA	3 cut(s)	321, 337, 1219
Hpy188III	TCNNGA	7 cut(s)	341, 385, 435, 719, 831, 1058, 1130
Hpy8I	GTNNAC	3 cut(s)	873, 893, 1157
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	7 cut(s)	216, 355, 701, 705, 744, 875, 1075
HpyCH4III	ACNGT	3 cut(s)	17, 192, 906
HpyCH4IV	ACGT	1 cut(s)	754
HpyCH4V	TGCA	4 cut(s)	530, 800, 893, 1157
HpyF10VI	GCNNNNNNNGC	7 cut(s)	119, 140, 297, 352, 424, 527, 559
HpyF3I	CTNAG	4 cut(s)	263, 390, 1038, 1100
HpySE526I	ACGT	1 cut(s)	754
Hsp92I	GRCGYC	1 cut(s)	132
Hsp92II	CATG	2 cut(s)	112, 1094
HspAI	GCGC	3 cut(s)	132, 327, 624
KasI	GGCGCC	1 cut(s)	131
KroI	GCCGGC	1 cut(s)	725
KroNI	GCCGGC	1 cut(s)	727
Ksp22I	TGATCA	1 cut(s)	745
KspI	CCGCGG	2 cut(s)	304, 470
Kzo9I	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
LguI	GCTCTTC	2 cut(s)	205, 241
LmnI	GCTCC	7 cut(s)	296, 322, 376, 384, 479, 489, 1112
Lsp1109I	GCAGC	5 cut(s)	127, 143, 358, 988, 1196
LweI	GCATC	4 cut(s)	62, 625, 712, 988
MaeI	CTAG	3 cut(s)	615, 621, 983
MaeII	ACGT	1 cut(s)	754
MaeIII	GTNAC	2 cut(s)	30, 586
MalI	GATC	7 cut(s)	339, 747, 978, 1056, 1125, 1145, 1238
MbiI	CCGCTC	2 cut(s)	244, 317
MboI	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
MfeI	CAATTG	1 cut(s)	608
MflI	RGATCY	2 cut(s)	976, 1236
MhlI	GDGCHC	6 cut(s)	381, 647, 701, 814, 895, 1159
MluCI	AATT	8 cut(s)	66, 405, 608, 937, 1105, 1118, 1311, 1332
Mly113I	GGCGCC	1 cut(s)	132
MlyI	GAGTC	1 cut(s)	1214
MmeI	TCCRAC	1 cut(s)	71
MroNI	GCCGGC	1 cut(s)	725
MseI	TTAA	2 cut(s)	513, 779
MslI	CAYNNNNRTG	1 cut(s)	753
MspA1I	CMGCKG	3 cut(s)	140, 303, 469
MspCI	CTTAAG	1 cut(s)	512
MspI	CCGG	3 cut(s)	726, 1169, 1240
MspR9I	CCNGG	3 cut(s)	888, 897, 1241
MunI	CAATTG	1 cut(s)	608
Mva1269I	GAATGC	1 cut(s)	547
MvaI	CCWGG	2 cut(s)	888, 897
MvnI	CGCG	3 cut(s)	303, 329, 469
MwoI	GCNNNNNNNGC	7 cut(s)	119, 140, 297, 352, 424, 527, 559
NaeI	GCCGGC	1 cut(s)	727
NarI	GGCGCC	1 cut(s)	132
NciI	CCSGG	1 cut(s)	1241
NcoI	CCATGG	1 cut(s)	108
NdeII	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
NgoMIV	GCCGGC	1 cut(s)	725
NheI	GCTAGC	1 cut(s)	620
NlaIII	CATG	2 cut(s)	112, 1094
NlaIV	GGNNCC	5 cut(s)	133, 644, 645, 730, 1114
NmeAIII	GCCGAG	2 cut(s)	105, 248
NmuCI	GTSAC	2 cut(s)	30, 586
PaqCI	CACCTGC	1 cut(s)	748
PceI	AGGCCT	1 cut(s)	228
PciSI	GCTCTTC	2 cut(s)	205, 241
PctI	GAATGC	1 cut(s)	547
PdiI	GCCGGC	1 cut(s)	727
PfeI	GAWTC	2 cut(s)	431, 652
PleI	GAGTC	1 cut(s)	1214
PluTI	GGCGCC	1 cut(s)	135
PpsI	GAGTC	1 cut(s)	1214
Ppu21I	YACGTR	1 cut(s)	755
Psp124BI	GAGCTC	1 cut(s)	381
Psp6I	CCWGG	2 cut(s)	886, 895
PspFI	CCCAGC	2 cut(s)	418, 638
PspGI	CCWGG	2 cut(s)	886, 895
PspN4I	GGNNCC	5 cut(s)	133, 644, 645, 730, 1114
PspOMI	GGGCCC	1 cut(s)	643
PspPI	GGNCC	5 cut(s)	643, 644, 728, 828, 884
PsuI	RGATCY	2 cut(s)	976, 1236
RsaI	GTAC	2 cut(s)	578, 1167
RsaNI	GTAC	2 cut(s)	577, 1166
RseI	CAYNNNNRTG	1 cut(s)	753
SacI	GAGCTC	1 cut(s)	381
SacII	CCGCGG	2 cut(s)	304, 470
SapI	GCTCTTC	2 cut(s)	205, 241
SaqAI	TTAA	2 cut(s)	513, 779
Sau3AI	GATC	7 cut(s)	337, 745, 976, 1054, 1123, 1143, 1236
Sau96I	GGNCC	5 cut(s)	643, 644, 728, 828, 884
ScaI	AGTACT	1 cut(s)	578
SchI	GAGTC	1 cut(s)	1214
ScrFI	CCNGG	3 cut(s)	888, 897, 1241
SduI	GDGCHC	6 cut(s)	381, 647, 701, 814, 895, 1159
SfaNI	GCATC	4 cut(s)	62, 625, 712, 988
SfcI	CTRYAG	2 cut(s)	766, 1283
SfoI	GGCGCC	1 cut(s)	133
Sfr303I	CCGCGG	2 cut(s)	304, 470
SgrBI	CCGCGG	2 cut(s)	304, 470
SinI	GGWCC	1 cut(s)	828
SmiMI	CAYNNNNRTG	1 cut(s)	753
SmlI	CTYRAG	4 cut(s)	350, 383, 493, 512
SmoI	CTYRAG	4 cut(s)	350, 383, 493, 512
SpeI	ACTAGT	1 cut(s)	982
Sse9I	AATT	8 cut(s)	66, 405, 608, 937, 1105, 1118, 1311, 1332
SseBI	AGGCCT	1 cut(s)	228
SspDI	GGCGCC	1 cut(s)	131
SspMI	CTAG	3 cut(s)	615, 621, 983
SstI	GAGCTC	1 cut(s)	381
StuI	AGGCCT	1 cut(s)	228
StyD4I	CCNGG	3 cut(s)	886, 895, 1239
StyI	CCWWGG	2 cut(s)	108, 229
TaaI	ACNGT	3 cut(s)	17, 192, 906
TaiI	ACGT	1 cut(s)	757
TaqI	TCGA	1 cut(s)	1146
TasI	AATT	8 cut(s)	66, 405, 608, 937, 1105, 1118, 1311, 1332
TatI	WGTACW	1 cut(s)	576
TfiI	GAWTC	2 cut(s)	431, 652
Tru1I	TTAA	2 cut(s)	513, 779
Tru9I	TTAA	2 cut(s)	513, 779
TscAI	CASTG	3 cut(s)	195, 701, 850
TseFI	GTSAC	2 cut(s)	30, 586
TseI	GCWGC	5 cut(s)	140, 156, 346, 1001, 1184
Tsp45I	GTSAC	2 cut(s)	30, 586
TspDTI	ATGAA	3 cut(s)	674, 987, 1241
TspGWI	ACGGA	1 cut(s)	106
TspRI	CASTG	3 cut(s)	195, 701, 850
Vha464I	CTTAAG	1 cut(s)	512
VneI	GTGCAC	2 cut(s)	891, 1155
VpaK11BI	GGWCC	1 cut(s)	828
XapI	RAATTY	2 cut(s)	66, 1118
XmiI	GTMKAC	1 cut(s)	872
XspI	CTAG	3 cut(s)	615, 621, 983
ZrmI	AGTACT	1 cut(s)	578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.