Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0005692

Physical Location & Seq

Genomic Coordinates Reverse (-)

18006428 .. 18009744

Gene Structure 3317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00178270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1098 bp

ATGGCCTCCGTCGCTCTCGGCGGCGCCGCCGCTGCTACCTCTACTCGCTGCCTCCTCCCCTCCTCCGCCAGAGCCTCCCTCTCTCTGTCTCGCTCTTCTCCTTCGTCTCTCAAATGCCGAGGCCTCGGCTCTTCTCCGCTCATCTCTCACCTCTTCCTCAGCCGCAAAGCCTCGCCGATGGTGTGCTCCTCCAACCGCGGCTTCGCCGCCGCTCCGAAATGCGCGGCCTCCGATCCCGAGCAGCTCAAGCTTGCGAAGGAGGACATCAAGGAGCTCCTCAAGACTAAGTTCTGCCATCCAATTCTGGTTCGGCTGGGATGGCACGATTCTGGAACTTACAACAAGAACATTGAGGAGTGGCCGCAGAGAGGTGGAGCTAATGGGAGCTTGAGGTTTGAGATTGAGCTTAAGCACGCCGCTAATGCAGGTCTTGTGAATGCTTTGAAGCTTATTCAGCCTATCAAAGACAAGTACTCTGGTGTCTCATACGCAGACTTGTTCCAATTGGCTAGTGCTAGCGCTGTGGAGGATGCTGGGGGCCCAAAGATTCCTATGAAGTATGGGAGAGTTGATGTTTCAGCACCAGAGCAATGCCGGCCCCCTTCACCTGCTGATCATCTACGTGAGGTGTTCTACAGAATGGGGTTAAATGACAAGGAAATAGTTGCATTATCAGGGGCACACACTCTGGGGAGGTCCAGACCTGAACGCAGTGGTTGGGGCAAGCCAGAGACAAAGTATACGGTTGGCCATATGTTAGAGAAAGACGGGCCAGGTGCACCAGGAGGACAGTCTTGGACAGCACAATGGTTGAAGTTTGATAATTCCTACTTCAAGGATATCAAGGAAAAAAGGGATGAAGATCTACTAGTGTTGCCAACTGATGCTGCTCTTTTTGAAGACCCATCATTCAAGGTATTTGCTGAGAAGTATGCTGAAGATCAAGAAGCCTTCTTCAAGGACTATGCTGAAGCTCATGCTAAACTCAGCAATTTAGGAGCCAAATTTGATCCTCCAGAGGGTATTGTGATCGATGATGGTGCACAACCTGTACCAGAAAAGTTTGTGGCAGCTAAATACTCATCTGGCAAGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004130 GO:0004601 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009409 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009631 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010019 GO:0010033 GO:0016020 GO:0016209 GO:0016491 GO:0016684 GO:0016999 GO:0017001 GO:0017144 GO:0023052 GO:0031976 GO:0031984 GO:0033554 GO:0034357 GO:0034599 GO:0042221 GO:0042651 GO:0042737 GO:0042743 GO:0042744 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051187 GO:0051716 GO:0055035 GO:0055114 GO:0065007 GO:0070887 GO:0071588 GO:0072593 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00053 ko00480 map00053 map00480

Pfam Domains

Protein Families

peroxidase

Protein Analysis

365

Amino Acids

39.56

Weight (kDa)

8.37

Isoelectric Point (pI)

45.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	86 - 314	4.2e-46	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005692)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77490 AT1G77490 AT4G08390 AT4G08390 AT4G08390 AT4G08390 AT4G08390
fragaria_vesca	FvH4_2g27340 FvH4_2g27340 FvH4_2g27340 FvH4_2g27340
malus_domestica	MD00G1029300.v1.1
prunus_persica	Prupe.1G493900_v2.0.a1 Prupe.1G493900_v2.0.a1
pyrus_communis	pycom15g31010
rosa_chinensis	RchiOBHm_Chr6g0296151
rosa_laevigata	RLG00000011722
rosa_multiflora	Rmu_sc0000486.1_g000008 Rmu_sc0012446.1_g000003
rosa_roxburghii	Rroxscaffold_7G00171790 Rroxscaffold_7G00178270
rosa_rugosa	Rorug06G0258900.1 Rorug06G0259000
rosa_samantha	Rh6AG371200 Rh6BG379100 Rh6CG384400 Rh6DG371700
rosa_wichuraiana	Rw6G032330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	616
Acc36I	ACCTGC	2 cut(s)	416, 616
AccB1I	GGYRCC	1 cut(s)	23
AccBSI	CCGCTC	2 cut(s)	139, 212
AccI	GTMKAC	1 cut(s)	740
AccII	CGCG	2 cut(s)	198, 224
AclWI	GGATC	2 cut(s)	227, 1004
AcoI	YGGCCR	2 cut(s)	359, 748
AcsI	RAATTY	1 cut(s)	1004
AcuI	CTGAAG	2 cut(s)	957, 990
AcyI	GRCGYC	1 cut(s)	24
AfaI	GTAC	2 cut(s)	473, 1053
AfeI	AGCGCT	1 cut(s)	520
AfiI	CCNNNNNNNGG	2 cut(s)	368, 1019
AflII	CTTAAG	1 cut(s)	407
AgsI	TTSAA	6 cut(s)	445, 814, 835, 899, 913, 958
AhlI	ACTAGT	1 cut(s)	868
AjnI	CCWGG	2 cut(s)	772, 781
AjuI	GAANNNNNNNTTGG	2 cut(s)	185, 217
AluBI	AGCT	9 cut(s)	244, 250, 274, 377, 387, 406, 448, 974, 1073
AluI	AGCT	9 cut(s)	244, 250, 274, 377, 387, 406, 448, 974, 1073
Alw21I	GWGCWC	4 cut(s)	188, 276, 781, 1045
Alw26I	GTCTC	4 cut(s)	93, 111, 487, 725
Alw44I	GTGCAC	2 cut(s)	777, 1041
AlwI	GGATC	2 cut(s)	227, 1004
Ama87I	CYCGRG	1 cut(s)	236
Aor51HI	AGCGCT	1 cut(s)	520
AoxI	GGCC	8 cut(s)	3, 121, 225, 359, 538, 596, 748, 770
ApaI	GGGCCC	1 cut(s)	542
ApaLI	GTGCAC	2 cut(s)	777, 1041
ApeKI	GCWGC	5 cut(s)	32, 48, 241, 887, 1070
ApoI	RAATTY	1 cut(s)	1004
AspLEI	GCGC	3 cut(s)	26, 224, 521
AspS9I	GGNCC	5 cut(s)	538, 539, 597, 696, 770
AsuHPI	GGTGA	2 cut(s)	140, 597
AsuNHI	GCTAGC	1 cut(s)	515
AvaI	CYCGRG	1 cut(s)	236
AvaII	GGWCC	1 cut(s)	696
BaeGI	GKGCMC	4 cut(s)	542, 682, 781, 1045
BalI	TGGCCA	1 cut(s)	750
BanI	GGYRCC	1 cut(s)	23
BanII	GRGCYC	2 cut(s)	276, 542
BbsI	GAAGAC	1 cut(s)	906
Bbv12I	GWGCWC	4 cut(s)	188, 276, 781, 1045
BbvCI	CCTCAGC	1 cut(s)	158
BbvI	GCAGC	5 cut(s)	19, 35, 253, 874, 1082
BccI	CCATC	5 cut(s)	172, 303, 312, 913, 1031
BcgI	CGANNNNNNTGC	2 cut(s)	1022, 1056
BciT130I	CCWGG	2 cut(s)	774, 783
BclI	TGATCA	1 cut(s)	613
BcoDI	GTCTC	4 cut(s)	93, 111, 487, 725
BcuI	ACTAGT	1 cut(s)	868
BfaI	CTAG	4 cut(s)	510, 516, 869, 1096
BfmI	CTRYAG	1 cut(s)	634
BfoI	RGCGCY	2 cut(s)	27, 522
BfrI	CTTAAG	1 cut(s)	407
BfuAI	ACCTGC	2 cut(s)	416, 616
BglII	AGATCT	1 cut(s)	862
BmcAI	AGTACT	1 cut(s)	473
Bme1390I	CCNGG	2 cut(s)	774, 783
Bme18I	GGWCC	1 cut(s)	696
BmeT110I	CYCGRG	1 cut(s)	236
BmgT120I	GGNCC	5 cut(s)	538, 539, 597, 696, 770
BmiI	GGNNCC	5 cut(s)	25, 539, 540, 599, 1000
BmrFI	CCNGG	2 cut(s)	774, 783
BmsI	GCATC	2 cut(s)	520, 874
BmtI	GCTAGC	1 cut(s)	519
BpiI	GAAGAC	1 cut(s)	906
BplI	GAGNNNNNCTC	2 cut(s)	63, 95
BpmI	CTGGAG	1 cut(s)	999
Bpu10I	CCTNAGC	1 cut(s)	158
BpuEI	CTTGAG	3 cut(s)	230, 263, 409
Bsa29I	ATCGAT	1 cut(s)	1032
BsaAI	YACGTR	1 cut(s)	623
BsaBI	GATNNNNATC	1 cut(s)	861
BsaHI	GRCGYC	1 cut(s)	24
BsaJI	CCNNGG	3 cut(s)	118, 124, 196
Bsc4I	CCNNNNNNNGG	2 cut(s)	368, 1019
Bse118I	RCCGGY	1 cut(s)	594
Bse3DI	GCAATG	1 cut(s)	596
Bse8I	GATNNNNATC	1 cut(s)	861
BseBI	CCWGG	2 cut(s)	774, 783
BseCI	ATCGAT	1 cut(s)	1032
BseDI	CCNNGG	3 cut(s)	118, 124, 196
BseGI	GGATG	4 cut(s)	295, 323, 535, 862
BseJI	GATNNNNATC	1 cut(s)	861
BseLI	CCNNNNNNNGG	2 cut(s)	368, 1019
BseMI	GCAATG	1 cut(s)	596
BseMII	CTCAG	3 cut(s)	172, 915, 1000
BseRI	GAGGAG	5 cut(s)	44, 52, 178, 266, 368
BseSI	GKGCMC	4 cut(s)	542, 682, 781, 1045
BseXI	GCAGC	5 cut(s)	19, 35, 253, 874, 1082
BseYI	CCCAGC	2 cut(s)	313, 533
Bsh1236I	CGCG	2 cut(s)	198, 224
BshFI	GGCC	8 cut(s)	5, 123, 227, 361, 540, 598, 750, 772
BshNI	GGYRCC	1 cut(s)	23
BshVI	ATCGAT	1 cut(s)	1032
BsiHKAI	GWGCWC	4 cut(s)	188, 276, 781, 1045
BsiHKCI	CYCGRG	1 cut(s)	236
BsiSI	CCGG	1 cut(s)	595
BslI	CCNNNNNNNGG	2 cut(s)	368, 1019
BsmAI	GTCTC	4 cut(s)	93, 111, 487, 725
BsmBI	CGTCTC	1 cut(s)	111
BsmI	GAATGC	1 cut(s)	442
BsnI	GGCC	8 cut(s)	5, 123, 227, 361, 540, 598, 750, 772
BsoBI	CYCGRG	1 cut(s)	236
Bsp120I	GGGCCC	1 cut(s)	538
Bsp1286I	GDGCHC	6 cut(s)	188, 276, 542, 682, 781, 1045
Bsp143I	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
BspANI	GGCC	8 cut(s)	5, 123, 227, 361, 540, 598, 750, 772
BspCNI	CTCAG	3 cut(s)	171, 916, 999
BspDI	ATCGAT	1 cut(s)	1032
BspFNI	CGCG	2 cut(s)	198, 224
BspLI	GGNNCC	5 cut(s)	25, 539, 540, 599, 1000
BspMI	ACCTGC	2 cut(s)	416, 616
BspOI	GCTAGC	1 cut(s)	519
BspPI	GGATC	2 cut(s)	227, 1004
BspQI	GCTCTTC	2 cut(s)	100, 136
BspT107I	GGYRCC	1 cut(s)	23
BspTI	CTTAAG	1 cut(s)	407
BsrBI	CCGCTC	2 cut(s)	139, 212
BsrDI	GCAATG	1 cut(s)	596
BsrFI	RCCGGY	1 cut(s)	594
BssAI	RCCGGY	1 cut(s)	594
BssECI	CCNNGG	3 cut(s)	118, 124, 196
BssMI	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
BssNAI	GTATAC	1 cut(s)	741
BssNI	GRCGYC	1 cut(s)	24
Bst1107I	GTATAC	1 cut(s)	741
Bst2UI	CCWGG	2 cut(s)	774, 783
Bst4CI	ACNGT	2 cut(s)	745, 792
Bst6I	CTCTTC	3 cut(s)	100, 136, 158
BstACI	GRCGYC	1 cut(s)	24
BstAFI	CTTAAG	1 cut(s)	407
BstBAI	YACGTR	1 cut(s)	623
BstC8I	GCNNGC	5 cut(s)	252, 414, 517, 596, 725
BstDEI	CTNAG	4 cut(s)	158, 285, 924, 986
BstDSI	CCRYGG	1 cut(s)	196
BstF5I	GGATG	4 cut(s)	295, 323, 535, 862
BstFNI	CGCG	2 cut(s)	198, 224
BstH2I	RGCGCY	2 cut(s)	27, 522
BstHHI	GCGC	3 cut(s)	26, 224, 521
BstKTI	GATC	6 cut(s)	235, 616, 865, 943, 1012, 1032
BstMAI	GTCTC	4 cut(s)	93, 111, 487, 725
BstMBI	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 32, 247, 319, 422, 454, 595
BstNI	CCWGG	2 cut(s)	774, 783
BstSCI	CCNGG	2 cut(s)	772, 781
BstSFI	CTRYAG	1 cut(s)	634
BstSLI	GKGCMC	4 cut(s)	542, 682, 781, 1045
BstUI	CGCG	2 cut(s)	198, 224
BstV1I	GCAGC	5 cut(s)	19, 35, 253, 874, 1082
BstV2I	GAAGAC	1 cut(s)	906
BstX2I	RGATCY	1 cut(s)	862
BstYI	RGATCY	1 cut(s)	862
BstZ17I	GTATAC	1 cut(s)	741
Bsu15I	ATCGAT	1 cut(s)	1032
BsuRI	GGCC	8 cut(s)	5, 123, 227, 361, 540, 598, 750, 772
BsuTUI	ATCGAT	1 cut(s)	1032
BtgI	CCRYGG	1 cut(s)	196
BtsCI	GGATG	4 cut(s)	295, 323, 535, 862
BtsI	GCAGTG	1 cut(s)	718
BtsIMutI	CAGTG	1 cut(s)	718
BveI	ACCTGC	2 cut(s)	416, 616
Cac8I	GCNNGC	5 cut(s)	252, 414, 517, 596, 725
CfoI	GCGC	3 cut(s)	26, 224, 521
Cfr10I	RCCGGY	1 cut(s)	594
Cfr13I	GGNCC	5 cut(s)	538, 539, 597, 696, 770
Cfr42I	CCGCGG	1 cut(s)	199
ClaI	ATCGAT	1 cut(s)	1032
Csp6I	GTAC	2 cut(s)	472, 1052
CviAII	CATG	1 cut(s)	977
CviQI	GTAC	2 cut(s)	472, 1052
DdeI	CTNAG	4 cut(s)	158, 285, 924, 986
DinI	GGCGCC	1 cut(s)	25
DpnI	GATC	6 cut(s)	234, 615, 864, 942, 1011, 1031
DpnII	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
EaeI	YGGCCR	2 cut(s)	359, 748
Eam1104I	CTCTTC	3 cut(s)	100, 136, 158
EarI	CTCTTC	3 cut(s)	100, 136, 158
EciI	GGCGGA	1 cut(s)	55
Ecl136II	GAGCTC	1 cut(s)	274
Eco147I	AGGCCT	1 cut(s)	123
Eco24I	GRGCYC	2 cut(s)	276, 542
Eco32I	GATATC	1 cut(s)	841
Eco47I	GGWCC	1 cut(s)	696
Eco47III	AGCGCT	1 cut(s)	520
Eco53kI	GAGCTC	1 cut(s)	274
Eco57I	CTGAAG	2 cut(s)	957, 990
Eco88I	CYCGRG	1 cut(s)	236
EcoICRI	GAGCTC	1 cut(s)	274
EcoO109I	RGGNCCY	1 cut(s)	538
EcoRII	CCWGG	2 cut(s)	772, 781
EcoRV	GATATC	1 cut(s)	841
EcoT38I	GRGCYC	2 cut(s)	276, 542
EgeI	GGCGCC	1 cut(s)	25
EheI	GGCGCC	1 cut(s)	25
Esp3I	CGTCTC	1 cut(s)	111
FaeI	CATG	1 cut(s)	980
FaiI	YATR	9 cut(s)	487, 554, 561, 741, 753, 755, 933, 966, 978
FatI	CATG	1 cut(s)	976
FauNDI	CATATG	1 cut(s)	753
FbaI	TGATCA	1 cut(s)	613
FblI	GTMKAC	1 cut(s)	740
FokI	GGATG	4 cut(s)	282, 330, 542, 869
FriOI	GRGCYC	2 cut(s)	276, 542
FspBI	CTAG	4 cut(s)	510, 516, 869, 1096
GlaI	GCGC	3 cut(s)	25, 223, 520
GsaI	CCCAGC	2 cut(s)	317, 537
GsuI	CTGGAG	1 cut(s)	999
HaeII	RGCGCY	2 cut(s)	27, 522
HaeIII	GGCC	8 cut(s)	5, 123, 227, 361, 540, 598, 750, 772
HapII	CCGG	1 cut(s)	595
HhaI	GCGC	3 cut(s)	26, 224, 521
Hin1I	GRCGYC	1 cut(s)	24
Hin1II	CATG	1 cut(s)	980
Hin6I	GCGC	3 cut(s)	24, 222, 519
HinP1I	GCGC	3 cut(s)	24, 222, 519
HindIII	AAGCTT	2 cut(s)	248, 446
HinfI	GANTC	2 cut(s)	326, 547
HpaII	CCGG	1 cut(s)	595
HphI	GGTGA	2 cut(s)	140, 597
Hpy166II	GTNNAC	3 cut(s)	741, 779, 1043
Hpy188I	TCNGA	2 cut(s)	216, 232
Hpy188III	TCNNGA	6 cut(s)	236, 280, 330, 699, 944, 1016
Hpy8I	GTNNAC	3 cut(s)	741, 779, 1043
Hpy99I	CGWCG	1 cut(s)	14
HpyAV	CCTTC	4 cut(s)	111, 250, 612, 961
HpyCH4III	ACNGT	2 cut(s)	745, 792
HpyCH4IV	ACGT	1 cut(s)	622
HpyCH4V	TGCA	4 cut(s)	425, 668, 779, 1043
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 32, 247, 319, 422, 454, 595
HpyF3I	CTNAG	4 cut(s)	158, 285, 924, 986
HpySE526I	ACGT	1 cut(s)	622
Hsp92I	GRCGYC	1 cut(s)	24
Hsp92II	CATG	1 cut(s)	980
HspAI	GCGC	3 cut(s)	24, 222, 519
KasI	GGCGCC	1 cut(s)	23
KroI	GCCGGC	1 cut(s)	594
KroNI	GCCGGC	1 cut(s)	596
Ksp22I	TGATCA	1 cut(s)	613
KspI	CCGCGG	1 cut(s)	199
Kzo9I	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
LguI	GCTCTTC	2 cut(s)	100, 136
LmnI	GCTCC	7 cut(s)	191, 217, 271, 279, 374, 384, 998
Lsp1109I	GCAGC	5 cut(s)	19, 35, 253, 874, 1082
LweI	GCATC	2 cut(s)	520, 874
MaeI	CTAG	4 cut(s)	510, 516, 869, 1096
MaeII	ACGT	1 cut(s)	622
MalI	GATC	6 cut(s)	234, 615, 864, 942, 1011, 1031
MbiI	CCGCTC	2 cut(s)	139, 212
MboI	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
MboII	GAAGA	7 cut(s)	87, 123, 145, 872, 911, 946, 950
MfeI	CAATTG	1 cut(s)	503
MflI	RGATCY	1 cut(s)	862
MhlI	GDGCHC	6 cut(s)	188, 276, 542, 682, 781, 1045
MlsI	TGGCCA	1 cut(s)	750
MluCI	AATT	5 cut(s)	300, 503, 823, 991, 1004
MluNI	TGGCCA	1 cut(s)	750
Mly113I	GGCGCC	1 cut(s)	24
MmeI	TCCRAC	1 cut(s)	216
Mox20I	TGGCCA	1 cut(s)	750
MroNI	GCCGGC	1 cut(s)	594
MscI	TGGCCA	1 cut(s)	750
MseI	TTAA	2 cut(s)	408, 647
MslI	CAYNNNNRTG	1 cut(s)	621
Msp20I	TGGCCA	1 cut(s)	750
MspA1I	CMGCKG	2 cut(s)	32, 198
MspCI	CTTAAG	1 cut(s)	407
MspI	CCGG	1 cut(s)	595
MspR9I	CCNGG	2 cut(s)	774, 783
MunI	CAATTG	1 cut(s)	503
Mva1269I	GAATGC	1 cut(s)	442
MvaI	CCWGG	2 cut(s)	774, 783
MvnI	CGCG	2 cut(s)	198, 224
MwoI	GCNNNNNNNGC	7 cut(s)	11, 32, 247, 319, 422, 454, 595
NaeI	GCCGGC	1 cut(s)	596
NarI	GGCGCC	1 cut(s)	24
NdeI	CATATG	1 cut(s)	753
NdeII	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
NgoMIV	GCCGGC	1 cut(s)	594
NheI	GCTAGC	1 cut(s)	515
NlaIII	CATG	1 cut(s)	980
NlaIV	GGNNCC	5 cut(s)	25, 539, 540, 599, 1000
NmeAIII	GCCGAG	2 cut(s)	105, 143
PaqCI	CACCTGC	1 cut(s)	616
PceI	AGGCCT	1 cut(s)	123
PciSI	GCTCTTC	2 cut(s)	100, 136
PctI	GAATGC	1 cut(s)	442
PdiI	GCCGGC	1 cut(s)	596
PfeI	GAWTC	2 cut(s)	326, 547
PluTI	GGCGCC	1 cut(s)	27
Ppu21I	YACGTR	1 cut(s)	623
Psp124BI	GAGCTC	1 cut(s)	276
Psp6I	CCWGG	2 cut(s)	772, 781
PspFI	CCCAGC	2 cut(s)	313, 533
PspGI	CCWGG	2 cut(s)	772, 781
PspN4I	GGNNCC	5 cut(s)	25, 539, 540, 599, 1000
PspOMI	GGGCCC	1 cut(s)	538
PspPI	GGNCC	5 cut(s)	538, 539, 597, 696, 770
PsuI	RGATCY	1 cut(s)	862
RsaI	GTAC	2 cut(s)	473, 1053
RsaNI	GTAC	2 cut(s)	472, 1052
RseI	CAYNNNNRTG	1 cut(s)	621
SacI	GAGCTC	1 cut(s)	276
SacII	CCGCGG	1 cut(s)	199
SapI	GCTCTTC	2 cut(s)	100, 136
SaqAI	TTAA	2 cut(s)	408, 647
Sau3AI	GATC	6 cut(s)	232, 613, 862, 940, 1009, 1029
Sau96I	GGNCC	5 cut(s)	538, 539, 597, 696, 770
ScaI	AGTACT	1 cut(s)	473
ScrFI	CCNGG	2 cut(s)	774, 783
SduI	GDGCHC	6 cut(s)	188, 276, 542, 682, 781, 1045
SfaNI	GCATC	2 cut(s)	520, 874
SfcI	CTRYAG	1 cut(s)	634
SfoI	GGCGCC	1 cut(s)	25
Sfr303I	CCGCGG	1 cut(s)	199
SgrBI	CCGCGG	1 cut(s)	199
SinI	GGWCC	1 cut(s)	696
SmiMI	CAYNNNNRTG	1 cut(s)	621
SmlI	CTYRAG	4 cut(s)	245, 278, 388, 407
SmoI	CTYRAG	4 cut(s)	245, 278, 388, 407
SpeI	ACTAGT	1 cut(s)	868
Sse9I	AATT	5 cut(s)	300, 503, 823, 991, 1004
SseBI	AGGCCT	1 cut(s)	123
SspDI	GGCGCC	1 cut(s)	23
SspMI	CTAG	4 cut(s)	510, 516, 869, 1096
SstI	GAGCTC	1 cut(s)	276
StuI	AGGCCT	1 cut(s)	123
StyD4I	CCNGG	2 cut(s)	772, 781
TaaI	ACNGT	2 cut(s)	745, 792
TaiI	ACGT	1 cut(s)	625
TaqI	TCGA	1 cut(s)	1032
TasI	AATT	5 cut(s)	300, 503, 823, 991, 1004
TatI	WGTACW	1 cut(s)	471
TfiI	GAWTC	2 cut(s)	326, 547
Tru1I	TTAA	2 cut(s)	408, 647
Tru9I	TTAA	2 cut(s)	408, 647
TscAI	CASTG	1 cut(s)	718
TseI	GCWGC	5 cut(s)	32, 48, 241, 887, 1070
TspDTI	ATGAA	2 cut(s)	569, 873
TspRI	CASTG	1 cut(s)	718
Vha464I	CTTAAG	1 cut(s)	407
VneI	GTGCAC	2 cut(s)	777, 1041
VpaK11BI	GGWCC	1 cut(s)	696
XapI	RAATTY	1 cut(s)	1004
XmiI	GTMKAC	1 cut(s)	740
XspI	CTAG	4 cut(s)	510, 516, 869, 1096
ZrmI	AGTACT	1 cut(s)	473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.