No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21930 AT3G42150 AT3G42150 AT3G42150 |
| fragaria_vesca | FvH4_2g26520 FvH4_2g26520 FvH4_2g26520 |
| malus_domestica | MD03G1196900.v1.1 MD08G1168000.v1.1 MD15G1353400.v1.1 |
| prunus_persica | Prupe.1G501700_v2.0.a1 Prupe.1G501700_v2.0.a1 Prupe.1G501700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0295391 |
| rosa_laevigata | RLG00000011810 |
| rosa_multiflora | Rmu_sc0003058.1_g000012 |
| rosa_roxburghii | Rroxscaffold_171G00441520 Rroxscaffold_7G00172540 |
| rosa_rugosa | Rorug06G0250300 |
| rosa_samantha | Rh6AG363600 Rh6BG371800 Rh6CG378200 Rh6DG364400 |
| rosa_wichuraiana | Rw6G031740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 155 |
| AccB1I | GGYRCC | 1 cut(s) | 155 |
| AccII | CGCG | 1 cut(s) | 53 |
| AdeI | CACNNNGTG | 1 cut(s) | 189 |
| AfaI | GTAC | 1 cut(s) | 157 |
| AflIII | ACRYGT | 1 cut(s) | 51 |
| AluBI | AGCT | 2 cut(s) | 80, 223 |
| AluI | AGCT | 2 cut(s) | 80, 223 |
| Alw26I | GTCTC | 1 cut(s) | 260 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 80 |
| ApeKI | GCWGC | 1 cut(s) | 220 |
| Asp718I | GGTACC | 1 cut(s) | 155 |
| AspLEI | GCGC | 1 cut(s) | 130 |
| AsuNHI | GCTAGC | 1 cut(s) | 91 |
| BaeGI | GKGCMC | 1 cut(s) | 62 |
| BanI | GGYRCC | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 232 |
| BcoDI | GTCTC | 1 cut(s) | 260 |
| BfaI | CTAG | 2 cut(s) | 92, 283 |
| BfoI | RGCGCY | 1 cut(s) | 131 |
| BisI | GCNGC | 1 cut(s) | 221 |
| BlsI | GCNGC | 1 cut(s) | 222 |
| BmiI | GGNNCC | 2 cut(s) | 157, 274 |
| BmsI | GCATC | 1 cut(s) | 241 |
| BmtI | GCTAGC | 1 cut(s) | 95 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 23, 55 |
| BpuEI | CTTGAG | 1 cut(s) | 50 |
| Bse1I | ACTGG | 3 cut(s) | 101, 157, 274 |
| BseMII | CTCAG | 3 cut(s) | 54, 200, 255 |
| BseNI | ACTGG | 3 cut(s) | 101, 157, 274 |
| BseSI | GKGCMC | 1 cut(s) | 62 |
| BseXI | GCAGC | 1 cut(s) | 232 |
| BseYI | CCCAGC | 1 cut(s) | 80 |
| Bsh1236I | CGCG | 1 cut(s) | 53 |
| BshNI | GGYRCC | 1 cut(s) | 155 |
| BsmAI | GTCTC | 1 cut(s) | 260 |
| Bsp1286I | GDGCHC | 1 cut(s) | 62 |
| BspCNI | CTCAG | 3 cut(s) | 53, 199, 256 |
| BspFNI | CGCG | 1 cut(s) | 53 |
| BspLI | GGNNCC | 2 cut(s) | 157, 274 |
| BspOI | GCTAGC | 1 cut(s) | 95 |
| BspT107I | GGYRCC | 1 cut(s) | 155 |
| BsrI | ACTGG | 3 cut(s) | 101, 157, 274 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 251 |
| BstC8I | GCNNGC | 1 cut(s) | 93 |
| BstDEI | CTNAG | 4 cut(s) | 40, 186, 226, 264 |
| BstFNI | CGCG | 1 cut(s) | 53 |
| BstH2I | RGCGCY | 1 cut(s) | 131 |
| BstHHI | GCGC | 1 cut(s) | 130 |
| BstMAI | GTCTC | 1 cut(s) | 260 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 22, 92, 251, 260 |
| BstNSI | RCATGY | 1 cut(s) | 206 |
| BstSLI | GKGCMC | 1 cut(s) | 62 |
| BstUI | CGCG | 1 cut(s) | 53 |
| BstV1I | GCAGC | 1 cut(s) | 232 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 55 |
| BtsIMutI | CAGTG | 1 cut(s) | 194 |
| Cac8I | GCNNGC | 1 cut(s) | 93 |
| CaiI | CAGNNNCTG | 1 cut(s) | 80 |
| CfoI | GCGC | 1 cut(s) | 130 |
| Csp6I | GTAC | 1 cut(s) | 156 |
| CviAII | CATG | 2 cut(s) | 160, 203 |
| CviJI | RGCY | 7 cut(s) | 9, 16, 80, 86, 223, 233, 275 |
| CviKI_1 | RGCY | 7 cut(s) | 9, 16, 80, 86, 223, 233, 275 |
| CviQI | GTAC | 1 cut(s) | 156 |
| DdeI | CTNAG | 4 cut(s) | 40, 186, 226, 264 |
| DraIII | CACNNNGTG | 1 cut(s) | 189 |
| FaeI | CATG | 2 cut(s) | 163, 206 |
| FaiI | YATR | 3 cut(s) | 161, 176, 204 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 209, 241 |
| FatI | CATG | 2 cut(s) | 159, 202 |
| Fnu4HI | GCNGC | 1 cut(s) | 221 |
| Fsp4HI | GCNGC | 1 cut(s) | 221 |
| FspBI | CTAG | 2 cut(s) | 92, 283 |
| GlaI | GCGC | 1 cut(s) | 129 |
| GluI | GCNGC | 1 cut(s) | 221 |
| GsaI | CCCAGC | 1 cut(s) | 84 |
| HaeII | RGCGCY | 1 cut(s) | 131 |
| HhaI | GCGC | 1 cut(s) | 130 |
| Hin1II | CATG | 2 cut(s) | 163, 206 |
| Hin6I | GCGC | 1 cut(s) | 128 |
| HinP1I | GCGC | 1 cut(s) | 128 |
| HinfI | GANTC | 2 cut(s) | 180, 278 |
| HpyCH4V | TGCA | 2 cut(s) | 206, 245 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 22, 92, 251, 260 |
| HpyF3I | CTNAG | 4 cut(s) | 40, 186, 226, 264 |
| Hsp92II | CATG | 2 cut(s) | 163, 206 |
| HspAI | GCGC | 1 cut(s) | 128 |
| KpnI | GGTACC | 1 cut(s) | 159 |
| LmnI | GCTCC | 1 cut(s) | 272 |
| LpnPI | CCDG | 5 cut(s) | 30, 66, 114, 138, 255 |
| Lsp1109I | GCAGC | 1 cut(s) | 232 |
| LweI | GCATC | 1 cut(s) | 241 |
| MaeI | CTAG | 2 cut(s) | 92, 283 |
| MhlI | GDGCHC | 1 cut(s) | 62 |
| MluCI | AATT | 1 cut(s) | 96 |
| MluI | ACGCGT | 1 cut(s) | 51 |
| MmeI | TCCRAC | 1 cut(s) | 72 |
| MnlI | CCTC | 1 cut(s) | 25 |
| MseI | TTAA | 1 cut(s) | 21 |
| MvnI | CGCG | 1 cut(s) | 53 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 22, 92, 251, 260 |
| NheI | GCTAGC | 1 cut(s) | 91 |
| NlaIII | CATG | 2 cut(s) | 163, 206 |
| NlaIV | GGNNCC | 2 cut(s) | 157, 274 |
| NspI | RCATGY | 1 cut(s) | 206 |
| PfeI | GAWTC | 1 cut(s) | 180 |
| PkrI | GCNGC | 1 cut(s) | 222 |
| PspFI | CCCAGC | 1 cut(s) | 80 |
| PspN4I | GGNNCC | 2 cut(s) | 157, 274 |
| PstNI | CAGNNNCTG | 1 cut(s) | 80 |
| RsaI | GTAC | 1 cut(s) | 157 |
| RsaNI | GTAC | 1 cut(s) | 156 |
| SaqAI | TTAA | 1 cut(s) | 21 |
| SatI | GCNGC | 1 cut(s) | 221 |
| SduI | GDGCHC | 1 cut(s) | 62 |
| SetI | ASST | 3 cut(s) | 30, 82, 225 |
| SfaNI | GCATC | 1 cut(s) | 241 |
| SmlI | CTYRAG | 1 cut(s) | 29 |
| SmoI | CTYRAG | 1 cut(s) | 29 |
| Sse9I | AATT | 1 cut(s) | 96 |
| SspMI | CTAG | 2 cut(s) | 92, 283 |
| TasI | AATT | 1 cut(s) | 96 |
| TfiI | GAWTC | 1 cut(s) | 180 |
| Tru1I | TTAA | 1 cut(s) | 21 |
| Tru9I | TTAA | 1 cut(s) | 21 |
| TscAI | CASTG | 1 cut(s) | 194 |
| TseI | GCWGC | 1 cut(s) | 220 |
| TspRI | CASTG | 1 cut(s) | 194 |
| XceI | RCATGY | 1 cut(s) | 206 |
| XspI | CTAG | 2 cut(s) | 92, 283 |