Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0014922

Physical Location & Seq

Genomic Coordinates Reverse (-)

41599332 .. 41602240

Gene Structure 2909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G503100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGGCTTCTGAGAAGGTTGAGACTGTTATAGCCGGAAGCTACGTAGAAATGGAAAGAGAAGGGGAAGAGATGGACTCAAAGACAACTAAGAGCAAGCTCTCCACCTTTCTTTGGCATGGCGGCTCAGCCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCCCAAGTGCTTCTCACACTGCCATACTCATTTTCACAGCTGGGTTTGCTATCTGGGATTCTATTTCAGCTTTTCTATGGCTTGATGGGAAGCTGGACTGCTTACCTCATCAGTCTGCTCTATGTTGAGCACAGAACTAGAAAGGAAAGAGAAAAGGTTGATTTTAGGAACCATGTAATTCAGTGGTTTGAAGTTCTTGATGGGTTGCTGGGGAAGCACTGGAGGAATGTTGGCCTCTTTTTCAACTGCACTTTTCTTCTGTTCGGATCTGTAATTCAGTTAATTGCCTGTGCAAGTAACATCTACTACATAAACGACAATCTTGACAAGAGGACTTGGACTTATATCTTTGGAGCTTGCTGTGCTACAACTGTCTTCATCCCCTCCTTCCATAATTACAGAATTTGGTCATTCTTGGGGCTCATTATGACCACCTACACTGCTTGGTATCTCACCATTGCTTCCCTTATCCATGGAAAGGTTGAGGGAGTGAAGCACTCGGGTCCAACCACAATGGTTCTCTACTTCACTGGGGCTACTAACATTCTCTACACATTTGGTGGACATGCTGTTACAGTGGAGATTATGCATGCAATGTGGAAGCCACAGAAATTCAAGTTGATATACTTGATGGCCACACTCTATGTGCTGACCTTAACTCTGCCATCAGCTTCTGCTGTTTACTGGGCTTTTGGGGACAATCTCTTGACTCATTCCAATGCTCTAGCTTTGCTTCCAAGGACTGGATTTAGAGACACTGCTGTTGTGCTCATGCTCATCCATCAGTTTATCACATTTGGATTTGCTTGCACCCCTTTGTACTTTGTGTGGGAGAAATTCATTCAAATGCATGAGACCAAGAGCATGTTGAAGAGGGCCCTGGCTAGGCTCCCAGTGGTGATCCCAATTTGGTTCCTTGCTATCATATTCCCATTCTTTGGGCCCATCAACTCAACTGTTGGATCTCTTCTTGTCAGCTTTACTGTCTACATAATTCCTGCTTTAGCTCACATGGTCACCTTTGCTTCTGCATCTGCTAGAGAGAATGCTGTAGAGAGACCACCATCATTGTTGGGAGGCTGGGCTGGCTCATACGCCATTAACAGCTTTGTGGTGGTTTGGGTTTTGATAGTGGGATTTGGGTTTGGAGGGTGGGCAAGCATGCTCAACTTCATACGACAAGTCGACACATTTGGTCTATTCACCAAGTGCTACCAATGCCCCCCACACAAAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007275 GO:0008150 GO:0008509 GO:0008514 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009914 GO:0009926 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0010328 GO:0010817 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022622 GO:0022857 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0044464 GO:0046942 GO:0046943 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048829 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0060919 GO:0065007 GO:0065008 GO:0071702 GO:0071705 GO:0071944 GO:0080161 GO:0090696 GO:0090697 GO:0090698 GO:0098656 GO:0099402 GO:1903825 GO:1905039 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

468

Amino Acids

52.73

Weight (kDa)

8.86

Isoelectric Point (pI)

27.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014922)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77690
fragaria_vesca	FvH4_2g26410
malus_domestica	MD15G1355600.v1.1
prunus_persica	Prupe.1G503100_v2.0.a1
pyrus_communis	pycom08g14440 pycom15g31780
rosa_chinensis	RchiOBHm_Chr6g0295041
rosa_laevigata	RLG00000011824
rosa_multiflora	Rmu_sc0008767.1_g000008
rosa_roxburghii	Rroxscaffold_7G00172780
rosa_rugosa	Rorug06G0249000
rosa_samantha	Rh6AG362000 Rh6BG369600 Rh6CG376200 Rh6DG362800
rosa_wichuraiana	Rw6G031590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	908, 1103
AccI	GTMKAC	2 cut(s)	1152, 1350
AciI	CCGC	1 cut(s)	120
AclWI	GGATC	3 cut(s)	439, 1060, 1135
AcoI	YGGCCR	1 cut(s)	798
AcsI	RAATTY	3 cut(s)	567, 776, 1001
AdeI	CACNNNGTG	1 cut(s)	1374
AfaI	GTAC	1 cut(s)	986
AfiI	CCNNNNNNNGG	5 cut(s)	111, 643, 908, 1050, 1103
AgsI	TTSAA	5 cut(s)	356, 409, 781, 1010, 1036
AjnI	CCWGG	1 cut(s)	1044
Alw21I	GWGCWC	2 cut(s)	297, 936
Alw26I	GTCTC	4 cut(s)	14, 912, 1013, 1216
AlwI	GGATC	3 cut(s)	439, 1060, 1135
AlwNI	CAGNNNCTG	1 cut(s)	839
Ama87I	CYCGRG	1 cut(s)	664
AoxI	GGCC	4 cut(s)	397, 798, 1041, 1106
ApaI	GGGCCC	2 cut(s)	1045, 1110
ApoI	RAATTY	3 cut(s)	567, 776, 1001
AspS9I	GGNCC	5 cut(s)	668, 1041, 1042, 1106, 1107
AsuHPI	GGTGA	4 cut(s)	610, 1075, 1174, 1360
AvaI	CYCGRG	1 cut(s)	664
AvaII	GGWCC	1 cut(s)	668
BaeGI	GKGCMC	2 cut(s)	1045, 1110
BalI	TGGCCA	1 cut(s)	800
BanII	GRGCYC	3 cut(s)	588, 1045, 1110
BbsI	GAAGAC	1 cut(s)	532
Bbv12I	GWGCWC	2 cut(s)	297, 936
BccI	CCATC	8 cut(s)	64, 244, 359, 790, 838, 954, 1118, 1237
BciT130I	CCWGG	1 cut(s)	1046
BcoDI	GTCTC	4 cut(s)	14, 912, 1013, 1216
BfaI	CTAG	4 cut(s)	303, 890, 1050, 1203
BfmI	CTRYAG	1 cut(s)	1215
BisI	GCNGC	1 cut(s)	121
BlpI	GCTNAGC	1 cut(s)	124
BlsI	GCNGC	1 cut(s)	122
Bme1390I	CCNGG	1 cut(s)	1046
Bme18I	GGWCC	1 cut(s)	668
BmeT110I	CYCGRG	1 cut(s)	664
BmgT120I	GGNCC	5 cut(s)	668, 1041, 1042, 1106, 1107
BmiI	GGNNCC	6 cut(s)	335, 669, 1043, 1055, 1079, 1108
BmrFI	CCNGG	1 cut(s)	1046
BmrI	ACTGGG	3 cut(s)	705, 859, 1052
BmsI	GCATC	2 cut(s)	124, 1205
BmuI	ACTGGG	3 cut(s)	705, 859, 1052
BpiI	GAAGAC	1 cut(s)	532
BplI	GAGNNNNNCTC	2 cut(s)	59, 91
BpmI	CTGGAG	1 cut(s)	406
Bpu1102I	GCTNAGC	1 cut(s)	124
BsaAI	YACGTR	1 cut(s)	43
BsaI	GGTCTC	2 cut(s)	1013, 1216
BsaJI	CCNNGG	3 cut(s)	637, 902, 1044
Bsc4I	CCNNNNNNNGG	5 cut(s)	111, 643, 908, 1050, 1103
Bse1I	ACTGG	5 cut(s)	389, 700, 854, 913, 1058
Bse3DI	GCAATG	2 cut(s)	621, 765
BseBI	CCWGG	1 cut(s)	1046
BseDI	CCNNGG	3 cut(s)	637, 902, 1044
BseGI	GGATG	2 cut(s)	543, 942
BseLI	CCNNNNNNNGG	5 cut(s)	111, 643, 908, 1050, 1103
BseMI	GCAATG	2 cut(s)	621, 765
BseMII	CTCAG	1 cut(s)	138
BseNI	ACTGG	5 cut(s)	389, 700, 854, 913, 1058
BseSI	GKGCMC	2 cut(s)	1045, 1110
BseYI	CCCAGC	3 cut(s)	205, 373, 1245
BsgI	GTGCAG	1 cut(s)	397
BshFI	GGCC	4 cut(s)	399, 800, 1043, 1108
BsiHKAI	GWGCWC	2 cut(s)	297, 936
BsiHKCI	CYCGRG	1 cut(s)	664
BsiSI	CCGG	1 cut(s)	33
BslFI	GGGAC	1 cut(s)	875
BslI	CCNNNNNNNGG	5 cut(s)	111, 643, 908, 1050, 1103
BsmAI	GTCTC	4 cut(s)	14, 912, 1013, 1216
BsmFI	GGGAC	1 cut(s)	875
BsmI	GAATGC	1 cut(s)	1216
BsnI	GGCC	4 cut(s)	399, 800, 1043, 1108
Bso31I	GGTCTC	2 cut(s)	1013, 1216
BsoBI	CYCGRG	1 cut(s)	664
Bsp120I	GGGCCC	2 cut(s)	1041, 1106
Bsp1286I	GDGCHC	5 cut(s)	297, 588, 936, 1045, 1110
Bsp143I	GATC	3 cut(s)	431, 1065, 1127
Bsp1720I	GCTNAGC	1 cut(s)	124
Bsp19I	CCATGG	1 cut(s)	637
BspACI	CCGC	1 cut(s)	120
BspANI	GGCC	4 cut(s)	399, 800, 1043, 1108
BspCNI	CTCAG	1 cut(s)	137
BspLI	GGNNCC	6 cut(s)	335, 669, 1043, 1055, 1079, 1108
BspPI	GGATC	3 cut(s)	439, 1060, 1135
BspTNI	GGTCTC	2 cut(s)	1013, 1216
BsrDI	GCAATG	2 cut(s)	621, 765
BsrI	ACTGG	5 cut(s)	389, 700, 854, 913, 1058
BssECI	CCNNGG	3 cut(s)	637, 902, 1044
BssMI	GATC	3 cut(s)	431, 1065, 1127
BssT1I	CCWWGG	2 cut(s)	637, 902
Bst2UI	CCWGG	1 cut(s)	1046
Bst4CI	ACNGT	5 cut(s)	25, 538, 742, 1123, 1150
Bst6I	CTCTTC	3 cut(s)	60, 1031, 1137
BstBAI	YACGTR	1 cut(s)	43
BstC8I	GCNNGC	7 cut(s)	95, 523, 756, 973, 1252, 1324, 1328
BstDEI	CTNAG	3 cut(s)	9, 87, 124
BstDSI	CCRYGG	1 cut(s)	637
BstEII	GGTNACC	1 cut(s)	1180
BstF5I	GGATG	2 cut(s)	543, 942
BstKTI	GATC	3 cut(s)	434, 1068, 1130
BstMAI	GTCTC	4 cut(s)	14, 912, 1013, 1216
BstMBI	GATC	3 cut(s)	431, 1065, 1127
BstMWI	GCNNNNNNNGC	6 cut(s)	134, 211, 379, 527, 1251, 1383
BstNI	CCWGG	1 cut(s)	1046
BstNSI	RCATGY	4 cut(s)	734, 758, 1033, 1330
BstPI	GGTNACC	1 cut(s)	1180
BstSCI	CCNGG	1 cut(s)	1044
BstSFI	CTRYAG	1 cut(s)	1215
BstSLI	GKGCMC	2 cut(s)	1045, 1110
BstSNI	TACGTA	1 cut(s)	43
BstV2I	GAAGAC	1 cut(s)	532
BstX2I	RGATCY	2 cut(s)	431, 1127
BstYI	RGATCY	2 cut(s)	431, 1127
BsuRI	GGCC	4 cut(s)	399, 800, 1043, 1108
BtgI	CCRYGG	1 cut(s)	637
BtsCI	GGATG	2 cut(s)	543, 942
BtsI	GCAGTG	3 cut(s)	182, 603, 921
BtsIMutI	CAGTG	8 cut(s)	182, 353, 382, 603, 693, 747, 921, 1065
Cac8I	GCNNGC	7 cut(s)	95, 523, 756, 973, 1252, 1324, 1328
CaiI	CAGNNNCTG	1 cut(s)	839
Cfr13I	GGNCC	5 cut(s)	668, 1041, 1042, 1106, 1107
Csp6I	GTAC	1 cut(s)	985
CspCI	CAANNNNNGTGG	2 cut(s)	1215, 1250
CviQI	GTAC	1 cut(s)	985
DdeI	CTNAG	3 cut(s)	9, 87, 124
DpnI	GATC	3 cut(s)	433, 1067, 1129
DpnII	GATC	3 cut(s)	431, 1065, 1127
DraIII	CACNNNGTG	1 cut(s)	1374
EaeI	YGGCCR	1 cut(s)	798
Eam1104I	CTCTTC	3 cut(s)	60, 1031, 1137
EarI	CTCTTC	3 cut(s)	60, 1031, 1137
Eco105I	TACGTA	1 cut(s)	43
Eco130I	CCWWGG	2 cut(s)	637, 902
Eco24I	GRGCYC	3 cut(s)	588, 1045, 1110
Eco31I	GGTCTC	2 cut(s)	1013, 1216
Eco47I	GGWCC	1 cut(s)	668
Eco88I	CYCGRG	1 cut(s)	664
Eco91I	GGTNACC	1 cut(s)	1180
EcoO109I	RGGNCCY	2 cut(s)	1041, 1042
EcoO65I	GGTNACC	1 cut(s)	1180
EcoRII	CCWGG	1 cut(s)	1044
EcoT14I	CCWWGG	2 cut(s)	637, 902
EcoT22I	ATGCAT	3 cut(s)	139, 756, 1017
EcoT38I	GRGCYC	3 cut(s)	588, 1045, 1110
ErhI	CCWWGG	2 cut(s)	637, 902
FaqI	GGGAC	1 cut(s)	875
FblI	GTMKAC	2 cut(s)	1152, 1350
Fnu4HI	GCNGC	1 cut(s)	121
FokI	GGATG	2 cut(s)	530, 929
FriOI	GRGCYC	3 cut(s)	588, 1045, 1110
Fsp4HI	GCNGC	1 cut(s)	121
FspBI	CTAG	4 cut(s)	303, 890, 1050, 1203
GluI	GCNGC	1 cut(s)	121
GsaI	CCCAGC	3 cut(s)	209, 377, 1249
GsuI	CTGGAG	1 cut(s)	406
HaeIII	GGCC	4 cut(s)	399, 800, 1043, 1108
HapII	CCGG	1 cut(s)	33
HincII	GTYRAC	1 cut(s)	1351
HindII	GTYRAC	1 cut(s)	1351
HindIII	AAGCTT	1 cut(s)	1398
HinfI	GANTC	3 cut(s)	74, 223, 874
HpaII	CCGG	1 cut(s)	33
HphI	GGTGA	4 cut(s)	610, 1075, 1174, 1360
Hpy166II	GTNNAC	4 cut(s)	728, 847, 1153, 1351
Hpy188I	TCNGA	2 cut(s)	10, 431
Hpy188III	TCNNGA	3 cut(s)	362, 488, 871
Hpy8I	GTNNAC	4 cut(s)	728, 847, 1153, 1351
HpyAV	CCTTC	3 cut(s)	7, 53, 562
HpyCH4III	ACNGT	5 cut(s)	25, 538, 742, 1123, 1150
HpyCH4IV	ACGT	1 cut(s)	42
HpyCH4V	TGCA	8 cut(s)	137, 414, 458, 754, 758, 975, 1015, 1196
HpyF10VI	GCNNNNNNNGC	6 cut(s)	134, 211, 379, 527, 1251, 1383
HpyF3I	CTNAG	3 cut(s)	9, 87, 124
HpySE526I	ACGT	1 cut(s)	42
Kzo9I	GATC	3 cut(s)	431, 1065, 1127
LmnI	GCTCC	2 cut(s)	518, 1059
LweI	GCATC	2 cut(s)	124, 1205
MaeI	CTAG	4 cut(s)	303, 890, 1050, 1203
MaeII	ACGT	1 cut(s)	42
MaeIII	GTNAC	3 cut(s)	461, 736, 1180
MalI	GATC	3 cut(s)	433, 1067, 1129
MboI	GATC	3 cut(s)	431, 1065, 1127
MboII	GAAGA	5 cut(s)	77, 413, 532, 1048, 1124
MflI	RGATCY	2 cut(s)	431, 1127
MhlI	GDGCHC	5 cut(s)	297, 588, 936, 1045, 1110
MlsI	TGGCCA	1 cut(s)	800
MluCI	AATT	9 cut(s)	342, 438, 447, 559, 567, 776, 1001, 1071, 1158
MluNI	TGGCCA	1 cut(s)	800
MlyI	GAGTC	2 cut(s)	68, 868
MmeI	TCCRAC	2 cut(s)	695, 1105
MnlI	CCTC	9 cut(s)	281, 381, 410, 489, 559, 643, 1032, 1235, 1307
Mox20I	TGGCCA	1 cut(s)	800
Mph1103I	ATGCAT	3 cut(s)	139, 756, 1017
MscI	TGGCCA	1 cut(s)	800
MseI	TTAA	3 cut(s)	446, 821, 1266
MslI	CAYNNNNRTG	2 cut(s)	882, 1010
Msp20I	TGGCCA	1 cut(s)	800
MspA1I	CMGCKG	1 cut(s)	205
MspI	CCGG	1 cut(s)	33
MspR9I	CCNGG	1 cut(s)	1046
Mva1269I	GAATGC	1 cut(s)	1216
MvaI	CCWGG	1 cut(s)	1046
MwoI	GCNNNNNNNGC	6 cut(s)	134, 211, 379, 527, 1251, 1383
NcoI	CCATGG	1 cut(s)	637
NdeII	GATC	3 cut(s)	431, 1065, 1127
NlaIV	GGNNCC	6 cut(s)	335, 669, 1043, 1055, 1079, 1108
NmuCI	GTSAC	1 cut(s)	1180
NsiI	ATGCAT	3 cut(s)	139, 756, 1017
NspI	RCATGY	4 cut(s)	734, 758, 1033, 1330
PaeI	GCATGC	2 cut(s)	758, 1330
PctI	GAATGC	1 cut(s)	1216
PfeI	GAWTC	1 cut(s)	223
PflMI	CCANNNNNTGG	2 cut(s)	908, 1103
PkrI	GCNGC	1 cut(s)	122
PleI	GAGTC	2 cut(s)	68, 868
PpsI	GAGTC	2 cut(s)	68, 868
Ppu21I	YACGTR	1 cut(s)	43
Psp6I	CCWGG	1 cut(s)	1044
PspEI	GGTNACC	1 cut(s)	1180
PspFI	CCCAGC	3 cut(s)	205, 373, 1245
PspGI	CCWGG	1 cut(s)	1044
PspN4I	GGNNCC	6 cut(s)	335, 669, 1043, 1055, 1079, 1108
PspOMI	GGGCCC	2 cut(s)	1041, 1106
PspPI	GGNCC	5 cut(s)	668, 1041, 1042, 1106, 1107
PstNI	CAGNNNCTG	1 cut(s)	839
PsuI	RGATCY	2 cut(s)	431, 1127
PvuII	CAGCTG	1 cut(s)	205
RsaI	GTAC	1 cut(s)	986
RsaNI	GTAC	1 cut(s)	985
RseI	CAYNNNNRTG	2 cut(s)	882, 1010
SalI	GTCGAC	1 cut(s)	1349
SaqAI	TTAA	3 cut(s)	446, 821, 1266
SatI	GCNGC	1 cut(s)	121
Sau3AI	GATC	3 cut(s)	431, 1065, 1127
Sau96I	GGNCC	5 cut(s)	668, 1041, 1042, 1106, 1107
SchI	GAGTC	2 cut(s)	68, 868
ScrFI	CCNGG	1 cut(s)	1046
SduI	GDGCHC	5 cut(s)	297, 588, 936, 1045, 1110
SfaNI	GCATC	2 cut(s)	124, 1205
SfcI	CTRYAG	1 cut(s)	1215
SinI	GGWCC	1 cut(s)	668
SmiMI	CAYNNNNRTG	2 cut(s)	882, 1010
SnaBI	TACGTA	1 cut(s)	43
SphI	GCATGC	2 cut(s)	758, 1330
Sse9I	AATT	9 cut(s)	342, 438, 447, 559, 567, 776, 1001, 1071, 1158
SsiI	CCGC	1 cut(s)	120
SspMI	CTAG	4 cut(s)	303, 890, 1050, 1203
StyD4I	CCNGG	1 cut(s)	1044
StyI	CCWWGG	2 cut(s)	637, 902
TaaI	ACNGT	5 cut(s)	25, 538, 742, 1123, 1150
TaiI	ACGT	1 cut(s)	45
TaqI	TCGA	1 cut(s)	1350
TasI	AATT	9 cut(s)	342, 438, 447, 559, 567, 776, 1001, 1071, 1158
TatI	WGTACW	1 cut(s)	984
TauI	GCSGC	1 cut(s)	123
TfiI	GAWTC	1 cut(s)	223
Tru1I	TTAA	3 cut(s)	446, 821, 1266
Tru9I	TTAA	3 cut(s)	446, 821, 1266
TscAI	CASTG	8 cut(s)	189, 353, 389, 610, 700, 747, 928, 1065
TseFI	GTSAC	1 cut(s)	1180
Tsp45I	GTSAC	1 cut(s)	1180
TspDTI	ATGAA	3 cut(s)	532, 994, 1327
TspRI	CASTG	8 cut(s)	189, 353, 389, 610, 700, 747, 928, 1065
Van91I	CCANNNNNTGG	2 cut(s)	908, 1103
VpaK11BI	GGWCC	1 cut(s)	668
XapI	RAATTY	3 cut(s)	567, 776, 1001
XceI	RCATGY	4 cut(s)	734, 758, 1033, 1330
XmiI	GTMKAC	2 cut(s)	1152, 1350
XspI	CTAG	4 cut(s)	303, 890, 1050, 1203
Zsp2I	ATGCAT	3 cut(s)	139, 756, 1017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.