Prupe.1G523200_v2.0.a1

Copper transport protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
42850250 .. 42852660
2411 bp
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UTR
Exon/CDS
Intron
Prupe.1G523200.3

Sequence Viewer

Length: 246 bp
ATGACTACAGTCTTCAAGGTTGGTATGTCATGCCAAGGCTGTGTTGGTGCTGTGAAAAGGGTTCTTGGAAAACTTGAAGGCGTAGAATCATATAACATTGATTTTGATGCACAGAACGTGACGGTGAAAAGCAATTTACCACCCGAGACAGTCCTTCAAACCGTTTCCAAAACTGGCAAGAAGACTGCCTATTGGAGAGCAGAAGCACCAACAAAGCCTGAAGCAAAGCCTGTGGCTGCTGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

82

Amino Acids

8.64

Weight (kDa)

9.26

Isoelectric Point (pI)

32.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015908)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 240
AgsI TTSAA 3 cut(s) 16, 77, 158
Alw26I GTCTC 1 cut(s) 140
Ama87I CYCGRG 1 cut(s) 143
ApeKI GCWGC 2 cut(s) 236, 239
AsuHPI GGTGA 1 cut(s) 136
AvaI CYCGRG 1 cut(s) 143
BbsI GAAGAC 2 cut(s) 4, 188
BbvI GCAGC 2 cut(s) 223, 226
BcoDI GTCTC 1 cut(s) 140
BfmI CTRYAG 1 cut(s) 6
BisI GCNGC 2 cut(s) 237, 240
BlsI GCNGC 2 cut(s) 238, 241
BmeT110I CYCGRG 1 cut(s) 143
BmsI GCATC 1 cut(s) 97
BoxI GACNNNNGTC 1 cut(s) 8
BpiI GAAGAC 2 cut(s) 4, 188
BsaJI CCNNGG 1 cut(s) 34
Bse1I ACTGG 1 cut(s) 178
BseDI CCNNGG 1 cut(s) 34
BseNI ACTGG 1 cut(s) 178
BseXI GCAGC 2 cut(s) 223, 226
BsiHKCI CYCGRG 1 cut(s) 143
BsmAI GTCTC 1 cut(s) 140
BsoBI CYCGRG 1 cut(s) 143
BsrI ACTGG 1 cut(s) 178
BssECI CCNNGG 1 cut(s) 34
BssT1I CCWWGG 1 cut(s) 34
Bst4CI ACNGT 4 cut(s) 10, 124, 151, 163
BstMAI GTCTC 1 cut(s) 140
BstPAI GACNNNNGTC 1 cut(s) 8
BstSFI CTRYAG 1 cut(s) 6
BstV1I GCAGC 2 cut(s) 223, 226
BstV2I GAAGAC 2 cut(s) 4, 188
CspCI CAANNNNNGTGG 1 cut(s) 213
CviAII CATG 1 cut(s) 30
CviJI RGCY 4 cut(s) 39, 217, 229, 236
CviKI_1 RGCY 4 cut(s) 39, 217, 229, 236
Eco130I CCWWGG 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 240
Eco88I CYCGRG 1 cut(s) 143
EcoT14I CCWWGG 1 cut(s) 34
ErhI CCWWGG 1 cut(s) 34
FaeI CATG 1 cut(s) 33
FaiI YATR 4 cut(s) 26, 31, 91, 93
FatI CATG 1 cut(s) 29
Fnu4HI GCNGC 2 cut(s) 237, 240
Fsp4HI GCNGC 2 cut(s) 237, 240
GluI GCNGC 2 cut(s) 237, 240
Hin1II CATG 1 cut(s) 33
HinfI GANTC 1 cut(s) 86
HphI GGTGA 1 cut(s) 136
HpyAV CCTTC 2 cut(s) 71, 164
HpyCH4III ACNGT 4 cut(s) 10, 124, 151, 163
HpyCH4IV ACGT 1 cut(s) 117
HpyCH4V TGCA 1 cut(s) 110
HpySE526I ACGT 1 cut(s) 117
Hsp92II CATG 1 cut(s) 33
LpnPI CCDG 2 cut(s) 159, 231
Lsp1109I GCAGC 2 cut(s) 223, 226
LweI GCATC 1 cut(s) 97
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 1 cut(s) 118
MboII GAAGA 2 cut(s) 4, 193
MluCI AATT 1 cut(s) 133
NlaIII CATG 1 cut(s) 33
NmuCI GTSAC 1 cut(s) 118
PfeI GAWTC 1 cut(s) 86
PkrI GCNGC 2 cut(s) 238, 241
PshAI GACNNNNGTC 1 cut(s) 8
SatI GCNGC 2 cut(s) 237, 240
SetI ASST 2 cut(s) 21, 120
SfaNI GCATC 1 cut(s) 97
SfcI CTRYAG 1 cut(s) 6
Sse9I AATT 1 cut(s) 133
StyI CCWWGG 1 cut(s) 34
TaaI ACNGT 4 cut(s) 10, 124, 151, 163
TaiI ACGT 1 cut(s) 120
TasI AATT 1 cut(s) 133
TfiI GAWTC 1 cut(s) 86
TseFI GTSAC 1 cut(s) 118
TseI GCWGC 2 cut(s) 236, 239
Tsp45I GTSAC 1 cut(s) 118
XcmI CCANNNNNNNNNTGG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.