Rmu_co8296235.1_g000001

Copper transport protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8296235.1
Physical Location & Seq
Reverse (-)
390 .. 751
362 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8296235.1_g000001.1.cds

Sequence Viewer

Length: 207 bp
atgcagagaaacctgattctaggcaagatctgtgtggaatcatatgacattgattttgatgcacaaaaggtgacagtgaaaggcaatgtgccacccgagacagttctgcaaactgttaccaaaactggcaagaagactgcctactgggaggcagaagcaccagcagaacccgaagcaaagcctgcagaagctgtggctgctgcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

68

Amino Acids

7.33

Weight (kDa)

4.96

Isoelectric Point (pI)

31.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015908)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 1 cut(s) 191
AluI AGCT 1 cut(s) 191
Alw26I GTCTC 1 cut(s) 92
AlwNI CAGNNNCTG 1 cut(s) 191
Ama87I CYCGRG 1 cut(s) 95
ApeKI GCWGC 2 cut(s) 197, 200
ArsI GACNNNNNNTTYG 2 cut(s) 38, 70
AsuHPI GGTGA 1 cut(s) 82
AvaI CYCGRG 1 cut(s) 95
BarI GAAGNNNNNNTAC 2 cut(s) 125, 157
BbsI GAAGAC 1 cut(s) 140
BbvI GCAGC 2 cut(s) 184, 187
BcoDI GTCTC 1 cut(s) 92
BfaI CTAG 1 cut(s) 20
BfmI CTRYAG 1 cut(s) 183
BglII AGATCT 1 cut(s) 27
BisI GCNGC 2 cut(s) 198, 201
BlsI GCNGC 2 cut(s) 199, 202
BmeT110I CYCGRG 1 cut(s) 95
BmrI ACTGGG 1 cut(s) 154
BmsI GCATC 1 cut(s) 49
BmuI ACTGGG 1 cut(s) 154
BpiI GAAGAC 1 cut(s) 140
Bse1I ACTGG 2 cut(s) 130, 149
Bse3DI GCAATG 1 cut(s) 91
BseMI GCAATG 1 cut(s) 91
BseNI ACTGG 2 cut(s) 130, 149
BseXI GCAGC 2 cut(s) 184, 187
BsiHKCI CYCGRG 1 cut(s) 95
BsmAI GTCTC 1 cut(s) 92
BsoBI CYCGRG 1 cut(s) 95
Bsp143I GATC 1 cut(s) 27
BspMAI CTGCAG 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 91
BsrI ACTGG 2 cut(s) 130, 149
BssMI GATC 1 cut(s) 27
Bst4CI ACNGT 3 cut(s) 76, 103, 115
BstAPI GCANNNNNTGC 1 cut(s) 182
BstC8I GCNNGC 1 cut(s) 183
BstKTI GATC 1 cut(s) 30
BstMAI GTCTC 1 cut(s) 92
BstMBI GATC 1 cut(s) 27
BstMWI GCNNNNNNNGC 2 cut(s) 182, 197
BstSFI CTRYAG 1 cut(s) 183
BstV1I GCAGC 2 cut(s) 184, 187
BstV2I GAAGAC 1 cut(s) 140
BstX2I RGATCY 1 cut(s) 27
BstYI RGATCY 1 cut(s) 27
BtsIMutI CAGTG 1 cut(s) 81
Cac8I GCNNGC 1 cut(s) 183
CaiI CAGNNNCTG 1 cut(s) 191
CviJI RGCY 3 cut(s) 181, 191, 197
CviKI_1 RGCY 3 cut(s) 181, 191, 197
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
Eco88I CYCGRG 1 cut(s) 95
FaiI YATR 3 cut(s) 43, 45, 205
FauNDI CATATG 1 cut(s) 43
Fnu4HI GCNGC 2 cut(s) 198, 201
Fsp4HI GCNGC 2 cut(s) 198, 201
FspBI CTAG 1 cut(s) 20
GluI GCNGC 2 cut(s) 198, 201
HinfI GANTC 2 cut(s) 16, 38
HphI GGTGA 1 cut(s) 82
HpyCH4III ACNGT 3 cut(s) 76, 103, 115
HpyCH4V TGCA 5 cut(s) 4, 62, 109, 185, 203
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 197
Kzo9I GATC 1 cut(s) 27
LpnPI CCDG 5 cut(s) 26, 111, 130, 174, 195
Lsp1109I GCAGC 2 cut(s) 184, 187
LweI GCATC 1 cut(s) 49
MaeI CTAG 1 cut(s) 20
MaeIII GTNAC 2 cut(s) 70, 115
MalI GATC 1 cut(s) 29
MboI GATC 1 cut(s) 27
MboII GAAGA 1 cut(s) 145
MflI RGATCY 1 cut(s) 27
MnlI CCTC 1 cut(s) 142
MwoI GCNNNNNNNGC 2 cut(s) 182, 197
NdeI CATATG 1 cut(s) 43
NdeII GATC 1 cut(s) 27
NmuCI GTSAC 1 cut(s) 70
PfeI GAWTC 2 cut(s) 16, 38
PkrI GCNGC 2 cut(s) 199, 202
PstI CTGCAG 1 cut(s) 187
PstNI CAGNNNCTG 1 cut(s) 191
PsuI RGATCY 1 cut(s) 27
SatI GCNGC 2 cut(s) 198, 201
Sau3AI GATC 1 cut(s) 27
SetI ASST 3 cut(s) 15, 72, 193
SfaNI GCATC 1 cut(s) 49
SfcI CTRYAG 1 cut(s) 183
SspMI CTAG 1 cut(s) 20
TaaI ACNGT 3 cut(s) 76, 103, 115
TfiI GAWTC 2 cut(s) 16, 38
TscAI CASTG 1 cut(s) 81
TseFI GTSAC 1 cut(s) 70
TseI GCWGC 2 cut(s) 197, 200
Tsp45I GTSAC 1 cut(s) 70
TspRI CASTG 1 cut(s) 81
XspI CTAG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.