Prupe.2G083400_v2.0.a1

Copper transport protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
13239168 .. 13241560
2393 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G083400.1

Sequence Viewer

Length: 264 bp
ATGGCGTCTCAGACTACTGTCCTCAAGGTTGGTATGTCATGCCAAGGCTGTGTTGGTGCTGTGAAAAGGGTTCTTGGAAAACTTGAAGGTGTAGAATCATATGACATTGATTTCGACGCACAGAAAGTGACGGTGAAAAGCAATTTACCACCCGAGACAGTCCTGCAAACCGTTTCCAAAACTGGCAAGAAGACTGCCTATTGGGAAGCAGAAGCACCAGCAGAGCCCGAAGCAAAGCCTGCAGAAGCTGTGGCTGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

9.13

Weight (kDa)

5.36

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015908)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcyI GRCGYC 1 cut(s) 5
AgsI TTSAA 1 cut(s) 86
AluBI AGCT 1 cut(s) 248
AluI AGCT 1 cut(s) 248
Alw26I GTCTC 2 cut(s) 12, 149
AlwNI CAGNNNCTG 1 cut(s) 248
Ama87I CYCGRG 1 cut(s) 152
ApeKI GCWGC 2 cut(s) 254, 257
ArsI GACNNNNNNTTYG 2 cut(s) 95, 127
AsuHPI GGTGA 1 cut(s) 145
AvaI CYCGRG 1 cut(s) 152
BanII GRGCYC 1 cut(s) 228
BbsI GAAGAC 1 cut(s) 197
BbvI GCAGC 2 cut(s) 241, 244
BcoDI GTCTC 2 cut(s) 12, 149
BfmI CTRYAG 1 cut(s) 240
BisI GCNGC 2 cut(s) 255, 258
BlsI GCNGC 2 cut(s) 256, 259
BmeT110I CYCGRG 1 cut(s) 152
BoxI GACNNNNGTC 1 cut(s) 17
BpiI GAAGAC 1 cut(s) 197
BpuEI CTTGAG 1 cut(s) 8
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 1 cut(s) 43
Bse1I ACTGG 1 cut(s) 187
BseDI CCNNGG 1 cut(s) 43
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 1 cut(s) 187
BseXI GCAGC 2 cut(s) 241, 244
BsiHKCI CYCGRG 1 cut(s) 152
BsmAI GTCTC 2 cut(s) 12, 149
BsmBI CGTCTC 1 cut(s) 12
BsoBI CYCGRG 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 228
BspCNI CTCAG 1 cut(s) 22
BspMAI CTGCAG 1 cut(s) 244
BsrI ACTGG 1 cut(s) 187
BssECI CCNNGG 1 cut(s) 43
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 43
Bst4CI ACNGT 4 cut(s) 19, 133, 160, 172
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 239
BstC8I GCNNGC 1 cut(s) 240
BstDEI CTNAG 2 cut(s) 9, 261
BstMAI GTCTC 2 cut(s) 12, 149
BstMWI GCNNNNNNNGC 2 cut(s) 239, 254
BstPAI GACNNNNGTC 1 cut(s) 17
BstSFI CTRYAG 1 cut(s) 240
BstV1I GCAGC 2 cut(s) 241, 244
BstV2I GAAGAC 1 cut(s) 197
Cac8I GCNNGC 1 cut(s) 240
CaiI CAGNNNCTG 1 cut(s) 248
CseI GACGC 1 cut(s) 125
CviAII CATG 1 cut(s) 39
CviJI RGCY 5 cut(s) 48, 226, 238, 248, 254
CviKI_1 RGCY 5 cut(s) 48, 226, 238, 248, 254
DdeI CTNAG 2 cut(s) 9, 261
Eco130I CCWWGG 1 cut(s) 43
Eco24I GRGCYC 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 152
EcoT14I CCWWGG 1 cut(s) 43
EcoT38I GRGCYC 1 cut(s) 228
ErhI CCWWGG 1 cut(s) 43
Esp3I CGTCTC 1 cut(s) 12
FaeI CATG 1 cut(s) 42
FaiI YATR 4 cut(s) 35, 40, 100, 102
FatI CATG 1 cut(s) 38
FauNDI CATATG 1 cut(s) 100
Fnu4HI GCNGC 2 cut(s) 255, 258
FriOI GRGCYC 1 cut(s) 228
Fsp4HI GCNGC 2 cut(s) 255, 258
GluI GCNGC 2 cut(s) 255, 258
HgaI GACGC 1 cut(s) 125
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 1 cut(s) 42
HinfI GANTC 1 cut(s) 95
HphI GGTGA 1 cut(s) 145
Hpy188I TCNGA 1 cut(s) 12
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 1 cut(s) 80
HpyCH4III ACNGT 4 cut(s) 19, 133, 160, 172
HpyCH4V TGCA 2 cut(s) 166, 242
HpyF10VI GCNNNNNNNGC 2 cut(s) 239, 254
HpyF3I CTNAG 2 cut(s) 9, 261
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 1 cut(s) 42
LpnPI CCDG 4 cut(s) 168, 176, 231, 252
Lsp1109I GCAGC 2 cut(s) 241, 244
MaeIII GTNAC 1 cut(s) 127
MboII GAAGA 1 cut(s) 202
MhlI GDGCHC 1 cut(s) 228
MluCI AATT 1 cut(s) 142
MnlI CCTC 1 cut(s) 32
MwoI GCNNNNNNNGC 2 cut(s) 239, 254
NdeI CATATG 1 cut(s) 100
NlaIII CATG 1 cut(s) 42
NmuCI GTSAC 1 cut(s) 127
PfeI GAWTC 1 cut(s) 95
PkrI GCNGC 2 cut(s) 256, 259
PshAI GACNNNNGTC 1 cut(s) 17
PstI CTGCAG 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 248
SatI GCNGC 2 cut(s) 255, 258
SduI GDGCHC 1 cut(s) 228
SetI ASST 3 cut(s) 30, 91, 250
SfcI CTRYAG 1 cut(s) 240
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
Sse9I AATT 1 cut(s) 142
StyI CCWWGG 1 cut(s) 43
TaaI ACNGT 4 cut(s) 19, 133, 160, 172
TaqI TCGA 1 cut(s) 114
TasI AATT 1 cut(s) 142
TfiI GAWTC 1 cut(s) 95
TseFI GTSAC 1 cut(s) 127
TseI GCWGC 2 cut(s) 254, 257
Tsp45I GTSAC 1 cut(s) 127
XcmI CCANNNNNNNNNTGG 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.