Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013067

Physical Location & Seq

Genomic Coordinates Reverse (-)

43345339 .. 43347157

Gene Structure 1819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G530300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 876 bp

ATGAAAGGTGGATATGTTGACACCAAGGGTGGAAATTCAAAGCATCCATCACCCACCAATCATCGCGAATGCCAAACTTCCGAGGAAGAAAGACACCCAGCCGCCACCAGCAGCGGCACCGCCACTGTCACCACCAACCCCTCCGCCCAAAACCCCAAGTCCTCCGCCGCCGCGGACCCTTCCAACCCATCAGCCGACGGCGCCACCATCGAAGTCATCCGACGGCCCCGAGGCCGTCCACCTGGCTCCAAAAACAAGCCCAAACCCCCCGTCATCATCACCCGAGACTCAGAGCCCCCTATGAGCCCCTACATTCTCGAAGTCCCGGGAGGAAGCGACATCGTCGAGGCCGTCTCCCGCTTCTGCTGCCGCAAAAATATCGGCCTCTGCATTCTCACCGGCTCCGGAACCGTTGCTAACGTCACTCTCCGTCAACCGTCAACTACACCCGGAGCTACCGTTACTTTTCACGGCCGCTTCGACATCCTGTCAATCTCCGCCACCTTCCTCCCCCAAACCACGCCGTCCTGCCCCGTCTCCGTCCCCAGCGGCTTCACCATCTCCCTCGCCGGCCCGCAAGGCCAGATCGTCGGCGGCTTAGTGGCGGGGGCCCTCGTGGCGGCTGGGACTGTGTACGTCATCGCCGCGTCGTTTAACAACCCGTCTTATCATCGGCTTCCCGGGGAAGACGAGGCGGTTAGGAACTCGGGTTCGGGCGATGCCCACTCGCCGCCGTTGTCTGGGGGTGTGGAGAGTGGGGGGCACGCGCCGCCGTCATCGCAATCATGTGGGATGTCCATGTATAGCTGCCACTTGCCTACTGATGTCCTCTGGGCTCCAACTGCGAGGCAACCACCACCTCCACCGCCTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003680 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF296

Protein Analysis

292

Amino Acids

29.94

Weight (kDa)

8.17

Isoelectric Point (pI)

63.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14490 AT1G14490 AT5G49700
fragaria_vesca	FvH4_5g35490
malus_domestica	MD08G1196300.v1.1 MD15G1384100.v1.1
prunus_persica	Prupe.1G530300_v2.0.a1
pyrus_communis	pycom08g16870
rosa_chinensis	RchiOBHm_Chr7g0236871
rosa_laevigata	RLG00000001054
rosa_multiflora	Rmu_sc0002867.1_g000011
rosa_roxburghii	Rroxscaffold_3G00224740
rosa_rugosa	Rorug07G0300400
rosa_samantha	Rh7AG455300 Rh7BG426500 Rh7CG474000 Rh7DG443300
rosa_wichuraiana	Rw7G037800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	116, 200
AccII	CGCG	4 cut(s)	66, 173, 647, 767
AccIII	TCCGGA	1 cut(s)	404
AcoI	YGGCCR	1 cut(s)	472
AcsI	RAATTY	1 cut(s)	34
AcyI	GRCGYC	1 cut(s)	201
AfaI	GTAC	1 cut(s)	635
AfiI	CCNNNNNNNGG	2 cut(s)	619, 740
AgsI	TTSAA	1 cut(s)	39
AhdI	GACNNNNNGTC	1 cut(s)	487
AjnI	CCWGG	1 cut(s)	241
AloI	GAACNNNNNNTCC	2 cut(s)	694, 726
AluBI	AGCT	2 cut(s)	455, 807
AluI	AGCT	2 cut(s)	455, 807
Alw26I	GTCTC	3 cut(s)	279, 358, 541
Ama87I	CYCGRG	5 cut(s)	228, 282, 325, 680, 706
Aor13HI	TCCGGA	1 cut(s)	404
AoxI	GGCC	8 cut(s)	224, 232, 348, 382, 472, 571, 580, 609
ApaI	GGGCCC	1 cut(s)	613
ApeKI	GCWGC	3 cut(s)	111, 366, 807
ApoI	RAATTY	1 cut(s)	34
ArsI	GACNNNNNNTTYG	2 cut(s)	255, 287
AspLEI	GCGC	2 cut(s)	203, 769
AspS9I	GGNCC	5 cut(s)	175, 225, 572, 609, 610
AsuC2I	CCSGG	5 cut(s)	326, 327, 450, 681, 682
AsuHPI	GGTGA	5 cut(s)	42, 121, 271, 388, 547
AvaI	CYCGRG	5 cut(s)	228, 282, 325, 680, 706
AvaII	GGWCC	1 cut(s)	175
BaeGI	GKGCMC	2 cut(s)	613, 765
BanI	GGYRCC	2 cut(s)	116, 200
BanII	GRGCYC	4 cut(s)	297, 308, 613, 838
BauI	CACGAG	1 cut(s)	614
BbsI	GAAGAC	1 cut(s)	693
BbvI	GCAGC	3 cut(s)	123, 353, 794
BccI	CCATC	4 cut(s)	55, 196, 215, 566
BceAI	ACGGC	8 cut(s)	214, 219, 239, 335, 487, 508, 718, 757
BcgI	CGANNNNNNTGC	2 cut(s)	361, 395
BciT130I	CCWGG	1 cut(s)	243
BcnI	CCSGG	5 cut(s)	326, 327, 450, 681, 682
BcoDI	GTCTC	3 cut(s)	279, 358, 541
BfoI	RGCGCY	1 cut(s)	204
BglI	GCCNNNNNGGC	2 cut(s)	579, 617
Bme1390I	CCNGG	6 cut(s)	243, 326, 327, 450, 681, 682
Bme18I	GGWCC	1 cut(s)	175
BmeRI	GACNNNNNGTC	1 cut(s)	487
BmeT110I	CYCGRG	5 cut(s)	228, 282, 325, 680, 706
BmgT120I	GGNCC	5 cut(s)	175, 225, 572, 609, 610
BmrFI	CCNGG	6 cut(s)	243, 326, 327, 450, 681, 682
BmsI	GCATC	2 cut(s)	52, 709
BpiI	GAAGAC	1 cut(s)	693
BplI	GAGNNNNNCTC	2 cut(s)	338, 370
BpuMI	CCSGG	5 cut(s)	326, 327, 450, 681, 682
BsaHI	GRCGYC	1 cut(s)	201
BsaJI	CCNNGG	7 cut(s)	24, 81, 171, 229, 325, 680, 681
BsaWI	WCCGGW	1 cut(s)	404
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	2 cut(s)	619, 740
Bse118I	RCCGGY	2 cut(s)	398, 569
BseAI	TCCGGA	1 cut(s)	404
BseBI	CCWGG	1 cut(s)	243
BseDI	CCNNGG	7 cut(s)	24, 81, 171, 229, 325, 680, 681
BseGI	GGATG	4 cut(s)	43, 216, 483, 798
BseLI	CCNNNNNNNGG	2 cut(s)	619, 740
BseMII	CTCAG	1 cut(s)	303
BseSI	GKGCMC	2 cut(s)	613, 765
BseX3I	CGGCCG	1 cut(s)	472
BseXI	GCAGC	3 cut(s)	123, 353, 794
BseYI	CCCAGC	3 cut(s)	97, 545, 623
Bsh1236I	CGCG	4 cut(s)	66, 173, 647, 767
Bsh1285I	CGRYCG	1 cut(s)	475
BshFI	GGCC	8 cut(s)	226, 234, 350, 384, 474, 573, 582, 611
BshNI	GGYRCC	2 cut(s)	116, 200
BsiEI	CGRYCG	1 cut(s)	475
BsiHKCI	CYCGRG	5 cut(s)	228, 282, 325, 680, 706
BsiSI	CCGG	6 cut(s)	326, 399, 405, 450, 570, 681
BslFI	GGGAC	3 cut(s)	308, 527, 640
BslI	CCNNNNNNNGG	2 cut(s)	619, 740
BsmAI	GTCTC	3 cut(s)	279, 358, 541
BsmBI	CGTCTC	2 cut(s)	358, 541
BsmFI	GGGAC	3 cut(s)	308, 527, 640
BsmI	GAATGC	2 cut(s)	74, 390
BsnI	GGCC	8 cut(s)	226, 234, 350, 384, 474, 573, 582, 611
BsoBI	CYCGRG	5 cut(s)	228, 282, 325, 680, 706
Bsp120I	GGGCCC	1 cut(s)	609
Bsp1286I	GDGCHC	5 cut(s)	297, 308, 613, 765, 838
Bsp13I	TCCGGA	1 cut(s)	404
Bsp143I	GATC	1 cut(s)	585
Bsp68I	TCGCGA	1 cut(s)	66
BspANI	GGCC	8 cut(s)	226, 234, 350, 384, 474, 573, 582, 611
BspCNI	CTCAG	1 cut(s)	302
BspEI	TCCGGA	1 cut(s)	404
BspFNI	CGCG	4 cut(s)	66, 173, 647, 767
BspT107I	GGYRCC	2 cut(s)	116, 200
BsrFI	RCCGGY	2 cut(s)	398, 569
BssAI	RCCGGY	2 cut(s)	398, 569
BssECI	CCNNGG	7 cut(s)	24, 81, 171, 229, 325, 680, 681
BssMI	GATC	1 cut(s)	585
BssNI	GRCGYC	1 cut(s)	201
BssSI	CACGAG	1 cut(s)	614
BssT1I	CCWWGG	1 cut(s)	24
Bst2BI	CACGAG	1 cut(s)	614
Bst2UI	CCWGG	1 cut(s)	243
Bst4CI	ACNGT	5 cut(s)	127, 412, 438, 460, 631
BstACI	GRCGYC	1 cut(s)	201
BstC8I	GCNNGC	3 cut(s)	571, 575, 765
BstDEI	CTNAG	2 cut(s)	289, 598
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	4 cut(s)	43, 216, 483, 798
BstFNI	CGCG	4 cut(s)	66, 173, 647, 767
BstH2I	RGCGCY	1 cut(s)	204
BstHHI	GCGC	2 cut(s)	203, 769
BstKTI	GATC	1 cut(s)	588
BstMAI	GTCTC	3 cut(s)	279, 358, 541
BstMBI	GATC	1 cut(s)	585
BstMCI	CGRYCG	1 cut(s)	475
BstMWI	GCNNNNNNNGC	7 cut(s)	200, 366, 579, 617, 769, 778, 842
BstNI	CCWGG	1 cut(s)	243
BstSCI	CCNGG	6 cut(s)	241, 324, 325, 448, 679, 680
BstSLI	GKGCMC	2 cut(s)	613, 765
BstUI	CGCG	4 cut(s)	66, 173, 647, 767
BstV1I	GCAGC	3 cut(s)	123, 353, 794
BstV2I	GAAGAC	1 cut(s)	693
BstZI	CGGCCG	1 cut(s)	472
BsuRI	GGCC	8 cut(s)	226, 234, 350, 384, 474, 573, 582, 611
BtgI	CCRYGG	1 cut(s)	171
BtgZI	GCGATG	4 cut(s)	47, 625, 732, 762
BtsCI	GGATG	4 cut(s)	43, 216, 483, 798
BtsIMutI	CAGTG	1 cut(s)	123
BtuMI	TCGCGA	1 cut(s)	66
Cac8I	GCNNGC	3 cut(s)	571, 575, 765
CfoI	GCGC	2 cut(s)	203, 769
Cfr10I	RCCGGY	2 cut(s)	398, 569
Cfr13I	GGNCC	5 cut(s)	175, 225, 572, 609, 610
Cfr42I	CCGCGG	1 cut(s)	174
Cfr9I	CCCGGG	2 cut(s)	325, 680
CseI	GACGC	1 cut(s)	636
Csp6I	GTAC	1 cut(s)	634
CviAII	CATG	2 cut(s)	786, 799
CviQI	GTAC	1 cut(s)	634
DdeI	CTNAG	2 cut(s)	289, 598
DinI	GGCGCC	1 cut(s)	202
DpnI	GATC	1 cut(s)	587
DpnII	GATC	1 cut(s)	585
DriI	GACNNNNNGTC	1 cut(s)	487
EaeI	YGGCCR	1 cut(s)	472
EagI	CGGCCG	1 cut(s)	472
Eam1105I	GACNNNNNGTC	1 cut(s)	487
EciI	GGCGGA	3 cut(s)	133, 154, 487
EclXI	CGGCCG	1 cut(s)	472
Eco130I	CCWWGG	1 cut(s)	24
Eco24I	GRGCYC	4 cut(s)	297, 308, 613, 838
Eco47I	GGWCC	1 cut(s)	175
Eco52I	CGGCCG	1 cut(s)	472
Eco88I	CYCGRG	5 cut(s)	228, 282, 325, 680, 706
EcoO109I	RGGNCCY	2 cut(s)	609, 610
EcoRII	CCWGG	1 cut(s)	241
EcoT14I	CCWWGG	1 cut(s)	24
EcoT38I	GRGCYC	4 cut(s)	297, 308, 613, 838
EgeI	GGCGCC	1 cut(s)	202
EheI	GGCGCC	1 cut(s)	202
ErhI	CCWWGG	1 cut(s)	24
Esp3I	CGTCTC	2 cut(s)	358, 541
FaeI	CATG	2 cut(s)	789, 802
FaiI	YATR	5 cut(s)	15, 302, 787, 800, 804
FaqI	GGGAC	3 cut(s)	308, 527, 640
FatI	CATG	2 cut(s)	785, 798
FauI	CCCGC	3 cut(s)	365, 582, 598
FokI	GGATG	4 cut(s)	30, 203, 470, 805
FriOI	GRGCYC	4 cut(s)	297, 308, 613, 838
GlaI	GCGC	2 cut(s)	202, 768
GsaI	CCCAGC	3 cut(s)	101, 549, 627
HaeII	RGCGCY	1 cut(s)	204
HaeIII	GGCC	8 cut(s)	226, 234, 350, 384, 474, 573, 582, 611
HapII	CCGG	6 cut(s)	326, 399, 405, 450, 570, 681
HgaI	GACGC	1 cut(s)	636
HhaI	GCGC	2 cut(s)	203, 769
Hin1I	GRCGYC	1 cut(s)	201
Hin1II	CATG	2 cut(s)	789, 802
Hin6I	GCGC	2 cut(s)	201, 767
HinP1I	GCGC	2 cut(s)	201, 767
HincII	GTYRAC	3 cut(s)	19, 434, 441
HindII	GTYRAC	3 cut(s)	19, 434, 441
HinfI	GANTC	1 cut(s)	287
HpaII	CCGG	6 cut(s)	326, 399, 405, 450, 570, 681
HphI	GGTGA	5 cut(s)	42, 121, 271, 388, 547
Hpy166II	GTNNAC	5 cut(s)	19, 239, 434, 441, 634
Hpy188I	TCNGA	3 cut(s)	82, 221, 292
Hpy188III	TCNNGA	3 cut(s)	65, 317, 405
Hpy8I	GTNNAC	5 cut(s)	19, 239, 434, 441, 634
Hpy99I	CGWCG	5 cut(s)	200, 225, 347, 593, 652
HpyAV	CCTTC	2 cut(s)	189, 514
HpyCH4III	ACNGT	5 cut(s)	127, 412, 438, 460, 631
HpyCH4IV	ACGT	2 cut(s)	420, 636
HpyCH4V	TGCA	1 cut(s)	390
HpyF10VI	GCNNNNNNNGC	7 cut(s)	200, 366, 579, 617, 769, 778, 842
HpyF3I	CTNAG	2 cut(s)	289, 598
HpySE526I	ACGT	2 cut(s)	420, 636
Hsp92I	GRCGYC	1 cut(s)	201
Hsp92II	CATG	2 cut(s)	789, 802
HspAI	GCGC	2 cut(s)	201, 767
KasI	GGCGCC	1 cut(s)	200
Kpn2I	TCCGGA	1 cut(s)	404
KroI	GCCGGC	1 cut(s)	569
KroNI	GCCGGC	1 cut(s)	571
KspI	CCGCGG	1 cut(s)	174
Kzo9I	GATC	1 cut(s)	585
LmnI	GCTCC	4 cut(s)	251, 407, 452, 841
Lsp1109I	GCAGC	3 cut(s)	123, 353, 794
LweI	GCATC	2 cut(s)	52, 709
MaeII	ACGT	2 cut(s)	420, 636
MaeIII	GTNAC	3 cut(s)	127, 421, 460
MalI	GATC	1 cut(s)	587
MboI	GATC	1 cut(s)	585
MboII	GAAGA	2 cut(s)	98, 698
MhlI	GDGCHC	5 cut(s)	297, 308, 613, 765, 838
MluCI	AATT	1 cut(s)	34
Mly113I	GGCGCC	1 cut(s)	201
MlyI	GAGTC	1 cut(s)	281
MmeI	TCCRAC	3 cut(s)	207, 244, 863
MroI	TCCGGA	1 cut(s)	404
MroNI	GCCGGC	1 cut(s)	569
MseI	TTAA	1 cut(s)	654
MspA1I	CMGCKG	3 cut(s)	114, 173, 549
MspI	CCGG	6 cut(s)	326, 399, 405, 450, 570, 681
MspR9I	CCNGG	6 cut(s)	243, 326, 327, 450, 681, 682
Mva1269I	GAATGC	2 cut(s)	74, 390
MvaI	CCWGG	1 cut(s)	243
MvnI	CGCG	4 cut(s)	66, 173, 647, 767
MwoI	GCNNNNNNNGC	7 cut(s)	200, 366, 579, 617, 769, 778, 842
NaeI	GCCGGC	1 cut(s)	571
NarI	GGCGCC	1 cut(s)	201
NciI	CCSGG	5 cut(s)	326, 327, 450, 681, 682
NdeII	GATC	1 cut(s)	585
NgoMIV	GCCGGC	1 cut(s)	569
NlaIII	CATG	2 cut(s)	789, 802
NmuCI	GTSAC	2 cut(s)	127, 421
NruI	TCGCGA	1 cut(s)	66
PcsI	WCGNNNNNNNCGW	2 cut(s)	348, 477
PctI	GAATGC	2 cut(s)	74, 390
PdiI	GCCGGC	1 cut(s)	571
PflFI	GACNNNGTC	1 cut(s)	341
PleI	GAGTC	1 cut(s)	281
PluTI	GGCGCC	1 cut(s)	204
PpsI	GAGTC	1 cut(s)	281
Psp6I	CCWGG	1 cut(s)	241
PspFI	CCCAGC	3 cut(s)	97, 545, 623
PspGI	CCWGG	1 cut(s)	241
PspOMI	GGGCCC	1 cut(s)	609
PspPI	GGNCC	5 cut(s)	175, 225, 572, 609, 610
PsyI	GACNNNGTC	1 cut(s)	341
RruI	TCGCGA	1 cut(s)	66
RsaI	GTAC	1 cut(s)	635
RsaNI	GTAC	1 cut(s)	634
SacII	CCGCGG	1 cut(s)	174
SaqAI	TTAA	1 cut(s)	654
Sau3AI	GATC	1 cut(s)	585
Sau96I	GGNCC	5 cut(s)	175, 225, 572, 609, 610
SchI	GAGTC	1 cut(s)	281
ScrFI	CCNGG	6 cut(s)	243, 326, 327, 450, 681, 682
SduI	GDGCHC	5 cut(s)	297, 308, 613, 765, 838
SetI	ASST	8 cut(s)	10, 244, 423, 457, 506, 639, 809, 862
SfaNI	GCATC	2 cut(s)	52, 709
SfiI	GGCCNNNNNGGCC	1 cut(s)	579
SfoI	GGCGCC	1 cut(s)	202
Sfr303I	CCGCGG	1 cut(s)	174
SgrBI	CCGCGG	1 cut(s)	174
SinI	GGWCC	1 cut(s)	175
SmaI	CCCGGG	2 cut(s)	327, 682
Sse9I	AATT	1 cut(s)	34
SspDI	GGCGCC	1 cut(s)	200
StyD4I	CCNGG	6 cut(s)	241, 324, 325, 448, 679, 680
StyI	CCWWGG	1 cut(s)	24
TaaI	ACNGT	5 cut(s)	127, 412, 438, 460, 631
TaiI	ACGT	2 cut(s)	423, 639
TaqI	TCGA	4 cut(s)	210, 318, 345, 480
TasI	AATT	1 cut(s)	34
Tru1I	TTAA	1 cut(s)	654
Tru9I	TTAA	1 cut(s)	654
TscAI	CASTG	1 cut(s)	130
TseFI	GTSAC	2 cut(s)	127, 421
TseI	GCWGC	3 cut(s)	111, 366, 807
Tsp45I	GTSAC	2 cut(s)	127, 421
TspDTI	ATGAA	1 cut(s)	17
TspGWI	ACGGA	2 cut(s)	419, 529
TspMI	CCCGGG	2 cut(s)	325, 680
TspRI	CASTG	1 cut(s)	130
Tth111I	GACNNNGTC	1 cut(s)	341
VpaK11BI	GGWCC	1 cut(s)	175
XapI	RAATTY	1 cut(s)	34
XmaI	CCCGGG	2 cut(s)	325, 680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.