Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0013067

Physical Location & Seq

Genomic Coordinates Reverse (-)

29731568 .. 29735224

Gene Structure 3657 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0300400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGAGGAAGAAGAGGAAATGGATTCTCTGTTCGAGGGCATGGTGTTGTTCGACCCCACTTCCAATTCCAGTTCCGACTCACACCATCCTCCTCCTCCTCCTCAGCAGAATCAGGACAACGCCCAAGATCCCAAACTTGAAATTGAAGCTCCGCCATCATCATCATCATCTGAACCCCTCGACGAGAACCTCTTCTCCGACCTCACTGTCCAATTCCAAACCCCACCACCACCACTAGACCAAGACCAAGAAGATCCGATCAAAACCACATCCAGACAGAATTCGAGTTCCCGGAAGAAAAAAAGAGCCGCCGGATTAAGAATCGGTTACGCCAGAGATGCCAACGCTCACTCTCTCTCTTTCGACGCCGATGACGTCATCATCGCCGACGGAACCGATTCGCTTCCCGAACCCAGCCCTTCTTCTGTATCAGTATCAGTACCAGTCCAATCCCAACCCGAACCCGAAGTCGAAAACGAACCCGAACCCGAACCCGAACCCGAAGCTGAACCCGAAACTGAACCCAAAGCCGACGAAGCTGAAGCGACTCCGGAGCTCCGGTTGGATCAAAGCAAGGCGTTGATCGCCGAGAAGCTGAGCAGTGCTCGTCAGTTGGCGGCGTCTGTTTCCTCCGCCAGGAAGGACGCAATTGCGAGGAGGAGGACGGCGGCTGACAATCTCAATCTGGCTTCTGGCGATTACGCCAGTCTAGAGAAGCAGCTGGAAGAGGCCTGCGAGGCAGAGGATTTCGAGACGGCCGAAAGGCTTAGTGACAGCCTTGCTGCTGCTCAGGAGAAGAGGCAGGCTCTGTTGGCCGCACTCAGAGATGCTGAGGCTGAATGTGATGCTGTCGACTCCAAAATGCATGAGGTTCTCCAATCCCAGATCGCCGCAGAGGAACAATGCGCCTCTCTCCTCCAACACTTCGCAACTGATGCTTCAAGTAATGCAGATTTGGTCTTAAAGGCAGCAGAGGAACTCTCTTCCACGGAAACAGACAAATGGCTTTCATCAACTGAAGCCTTGGAAGCCAAGAAGATGGAATTGGAAATTGAATCGCATATAATTGGTGATGCAGGGCTTGTCTTAAACAGTTCCATTGAGACTTCAGTGGAGGATGACAAGAGAGAGAAAGAATCTCTCTGTAAGAAAAAGGAAACTCTTACGGACGAACTGGAGAAACTTCTAGCATTGGTGAGAGAGAAGGAACAGGAGATTGCACAAAATGATCGTGACATCCAACAAGTTGAGGAAAAGATTGCTAATGTTCTCTCCGGCTTCGGGGAGATGCAATCCACTATTCAGGCCAAGTCTAGTAACTTGCAAGAAGCCCTTTCCCAGATACAGTTGGAGAGTGAAGCTCTGTCAACAAAAAAGACAGAAATCGATGCTGTCCTTACTCAGGAGCAAGAGAGGGGAGCAAAGTTGAGGGAACTGGCCAGGGTTTCTGCAGAGGAAGCAGAGTCATACCAACAAGTTGCTGCTCTTAGAAAGAGTCTAATGTCCTCTATTTTGAAGTCCAGGGAAGATAAGGTCAGACTAGCAAAGACTGAGGAAAAGCTTTCCGAGGATGTTCAAAAGCTCCAACAGGATGTTTCTGCAGCAAGAACTTCACTTCAGGAACTGTCTTCAAGAAAGTCAAGCATTCAGCAAGATATAGCATCCTCTAAGCAGAAAATTATTTTCATAGATAAAAGAATCCCAGAGCTGGAAGCAGAAAAGAAAGTTGCTGCTACTGCAAGAAATTTCAAAGAAGCTGCACGAATAGCTGCTGAGGCCAAGTCATTGAATGTTGAAAAGGATGGTATACAGATTGACATGGAAAAGGCCATCTCAGAGCTTGAGAAGCTTGAGGAAGAGATTAAAGAGACTGTCAACAGATTGCAGGAGACTGAGGGGCACATTTTGTCCAAGGAAAAAGAGGTAGCAACGGCCAGGTTTCAAAGGTTGCTACTGGTATCTGGTATTGCTAAAGCAGAAAGAGAAGCTGCTTTGGAGTTGGGTGATCTTGAAGAAGCTAACCTGCTGCTTGCAGAGGCTGAAGCAGCAGACTCTGAAGCCAAGGAACTTGAACCTATATACAACTTCAAATTGGAAGAGACTGAAAGTCTACCAAAGCACTTTATGTCTATGGTGCTCATATCCAATCTTGGGAGGAAGCAGTTGGAAGAATTGGCAGCATCTGTTCAAGTTTCTTCAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003680 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF296

Protein Analysis

734

Amino Acids

80.8

Weight (kDa)

4.54

Isoelectric Point (pI)

62.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14490 AT1G14490 AT5G49700
fragaria_vesca	FvH4_5g35490
malus_domestica	MD08G1196300.v1.1 MD15G1384100.v1.1
prunus_persica	Prupe.1G530300_v2.0.a1
pyrus_communis	pycom08g16870
rosa_chinensis	RchiOBHm_Chr7g0236871
rosa_laevigata	RLG00000001054
rosa_multiflora	Rmu_sc0002867.1_g000011
rosa_roxburghii	Rroxscaffold_3G00224740
rosa_rugosa	Rorug07G0300400
rosa_samantha	Rh7AG455300 Rh7BG426500 Rh7CG474000 Rh7DG443300
rosa_wichuraiana	Rw7G037800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	206
AatII	GACGTC	1 cut(s)	378
Acc36I	ACCTGC	1 cut(s)	2031
AccI	GTMKAC	3 cut(s)	852, 1807, 2110
AccIII	TCCGGA	1 cut(s)	550
AciI	CCGC	7 cut(s)	152, 309, 617, 633, 668, 816, 891
AclWI	GGATC	3 cut(s)	122, 248, 573
AcoI	YGGCCR	4 cut(s)	756, 813, 1437, 1932
AcsI	RAATTY	2 cut(s)	280, 1744
AcuI	CTGAAG	7 cut(s)	561, 1038, 1092, 1601, 2061, 2076, 2181
AcyI	GRCGYC	3 cut(s)	366, 375, 620
AfaI	GTAC	1 cut(s)	441
AfiI	CCNNNNNNNGG	5 cut(s)	636, 1281, 1402, 1708, 2151
AhdI	GACNNNNNGTC	1 cut(s)	2106
AjnI	CCWGG	4 cut(s)	635, 1439, 1520, 1934
AjuI	GAANNNNNNNTTGG	2 cut(s)	1028, 1060
AloI	GAACNNNNNNTCC	4 cut(s)	14, 46, 179, 211
Alw21I	GWGCWC	3 cut(s)	558, 607, 2139
Alw26I	GTCTC	5 cut(s)	746, 1097, 1862, 1883, 2093
AlwI	GGATC	3 cut(s)	122, 248, 573
AlwNI	CAGNNNCTG	5 cut(s)	808, 1624, 2039, 2054, 2183
Aor13HI	TCCGGA	1 cut(s)	550
AoxI	GGCC	8 cut(s)	729, 756, 813, 1305, 1437, 1776, 1827, 1932
ApoI	RAATTY	2 cut(s)	280, 1744
ArsI	GACNNNNNNTTYG	2 cut(s)	453, 485
Asp700I	GAANNNNTTC	2 cut(s)	191, 397
AspLEI	GCGC	1 cut(s)	908
AsuC2I	CCSGG	1 cut(s)	292
AsuHPI	GGTGA	3 cut(s)	1082, 1207, 2015
BaeGI	GKGCMC	1 cut(s)	1902
BalI	TGGCCA	1 cut(s)	1439
BanII	GRGCYC	1 cut(s)	558
BbsI	GAAGAC	1 cut(s)	1620
Bbv12I	GWGCWC	3 cut(s)	558, 607, 2139
BbvCI	CCTCAGC	3 cut(s)	102, 831, 1773
BccI	CCATC	5 cut(s)	93, 163, 1033, 1796, 1838
BceAI	ACGGC	3 cut(s)	681, 771, 1947
BciT130I	CCWGG	4 cut(s)	637, 1441, 1522, 1936
BcnI	CCSGG	1 cut(s)	292
BcoDI	GTCTC	5 cut(s)	746, 1097, 1862, 1883, 2093
BfaI	CTAG	5 cut(s)	236, 710, 1187, 1314, 1541
BfmI	CTRYAG	2 cut(s)	1449, 1599
BfuAI	ACCTGC	1 cut(s)	2031
BglI	GCCNNNNNGGC	1 cut(s)	737
BlpI	GCTNAGC	1 cut(s)	596
Bme1390I	CCNGG	5 cut(s)	292, 637, 1441, 1522, 1936
BmeRI	GACNNNNNGTC	1 cut(s)	2106
BmiI	GGNNCC	1 cut(s)	394
BmrFI	CCNGG	5 cut(s)	292, 637, 1441, 1522, 1936
BmsI	GCATC	9 cut(s)	328, 817, 835, 925, 1063, 1278, 1378, 1670, 2189
BpiI	GAAGAC	1 cut(s)	1620
BplI	GAGNNNNNCTC	8 cut(s)	589, 621, 790, 822, 965, 997, 1345, 1377
BpmI	CTGGAG	1 cut(s)	1196
Bpu10I	CCTNAGC	4 cut(s)	102, 789, 831, 1773
Bpu1102I	GCTNAGC	1 cut(s)	596
BpuEI	CTTGAG	2 cut(s)	1862, 1871
BpuMI	CCSGG	1 cut(s)	292
Bsa29I	ATCGAT	1 cut(s)	1386
BsaHI	GRCGYC	3 cut(s)	366, 375, 620
BsaJI	CCNNGG	7 cut(s)	987, 1023, 1440, 1521, 1566, 1911, 2061
BsaWI	WCCGGW	2 cut(s)	550, 558
BsaXI	ACNNNNNCTCC	4 cut(s)	179, 209, 545, 575
Bsc4I	CCNNNNNNNGG	5 cut(s)	636, 1281, 1402, 1708, 2151
Bse1I	ACTGG	6 cut(s)	69, 443, 705, 1179, 1440, 1959
BseAI	TCCGGA	1 cut(s)	550
BseBI	CCWGG	4 cut(s)	637, 1441, 1522, 1936
BseCI	ATCGAT	1 cut(s)	1386
BseDI	CCNNGG	7 cut(s)	987, 1023, 1440, 1521, 1566, 1911, 2061
BseGI	GGATG	8 cut(s)	85, 269, 1123, 1236, 1576, 1597, 1661, 1807
BseLI	CCNNNNNNNGG	5 cut(s)	636, 1281, 1402, 1708, 2151
BseNI	ACTGG	6 cut(s)	69, 443, 705, 1179, 1440, 1959
BseRI	GAGGAG	7 cut(s)	81, 84, 87, 90, 670, 673, 905
BseSI	GKGCMC	1 cut(s)	1902
BseX3I	CGGCCG	1 cut(s)	756
BseYI	CCCAGC	1 cut(s)	413
BsgI	GTGCAG	1 cut(s)	1743
Bsh1285I	CGRYCG	1 cut(s)	759
BshFI	GGCC	8 cut(s)	731, 758, 815, 1307, 1439, 1778, 1829, 1934
BshVI	ATCGAT	1 cut(s)	1386
BsiEI	CGRYCG	1 cut(s)	759
BsiHKAI	GWGCWC	3 cut(s)	558, 607, 2139
BsiSI	CCGG	5 cut(s)	292, 312, 551, 559, 1275
BslI	CCNNNNNNNGG	5 cut(s)	636, 1281, 1402, 1708, 2151
BsmAI	GTCTC	5 cut(s)	746, 1097, 1862, 1883, 2093
BsmBI	CGTCTC	1 cut(s)	746
BsmI	GAATGC	1 cut(s)	1644
BsnI	GGCC	8 cut(s)	731, 758, 815, 1307, 1439, 1778, 1829, 1934
Bsp1286I	GDGCHC	4 cut(s)	558, 607, 1902, 2139
Bsp13I	TCCGGA	1 cut(s)	550
Bsp143I	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
Bsp1720I	GCTNAGC	1 cut(s)	596
BspACI	CCGC	7 cut(s)	152, 309, 617, 633, 668, 816, 891
BspANI	GGCC	8 cut(s)	731, 758, 815, 1307, 1439, 1778, 1829, 1934
BspDI	ATCGAT	1 cut(s)	1386
BspEI	TCCGGA	1 cut(s)	550
BspLI	GGNNCC	1 cut(s)	394
BspMAI	CTGCAG	2 cut(s)	1453, 1603
BspMI	ACCTGC	1 cut(s)	2031
BspPI	GGATC	3 cut(s)	122, 248, 573
BsrI	ACTGG	6 cut(s)	69, 443, 705, 1179, 1440, 1959
BssECI	CCNNGG	7 cut(s)	987, 1023, 1440, 1521, 1566, 1911, 2061
BssMI	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
BssNAI	GTATAC	1 cut(s)	1808
BssNI	GRCGYC	3 cut(s)	366, 375, 620
BssT1I	CCWWGG	3 cut(s)	1023, 1911, 2061
Bst1107I	GTATAC	1 cut(s)	1808
Bst2UI	CCWGG	4 cut(s)	637, 1441, 1522, 1936
Bst4CI	ACNGT	5 cut(s)	208, 1094, 1347, 1626, 1873
Bst6I	CTCTTC	7 cut(s)	6, 197, 720, 791, 988, 1851, 2091
BstACI	GRCGYC	3 cut(s)	366, 375, 620
BstAPI	GCANNNNNTGC	1 cut(s)	935
BstC8I	GCNNGC	3 cut(s)	733, 804, 2031
BstDSI	CCRYGG	1 cut(s)	987
BstENI	CCTNNNNNAGG	2 cut(s)	634, 1400
BstF5I	GGATG	8 cut(s)	85, 269, 1123, 1236, 1576, 1597, 1661, 1807
BstHHI	GCGC	1 cut(s)	908
BstKTI	GATC	8 cut(s)	130, 256, 261, 568, 585, 888, 1231, 2008
BstMAI	GTCTC	5 cut(s)	746, 1097, 1862, 1883, 2093
BstMBI	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
BstMCI	CGRYCG	1 cut(s)	759
BstNI	CCWGG	4 cut(s)	637, 1441, 1522, 1936
BstSCI	CCNGG	5 cut(s)	290, 635, 1439, 1520, 1934
BstSFI	CTRYAG	2 cut(s)	1449, 1599
BstSLI	GKGCMC	1 cut(s)	1902
BstV2I	GAAGAC	1 cut(s)	1620
BstX2I	RGATCY	2 cut(s)	127, 253
BstXI	CCANNNNNNTGG	1 cut(s)	1039
BstYI	RGATCY	2 cut(s)	127, 253
BstZ17I	GTATAC	1 cut(s)	1808
BstZI	CGGCCG	1 cut(s)	756
Bsu15I	ATCGAT	1 cut(s)	1386
BsuRI	GGCC	8 cut(s)	731, 758, 815, 1307, 1439, 1778, 1829, 1934
BsuTUI	ATCGAT	1 cut(s)	1386
BtgI	CCRYGG	1 cut(s)	987
BtgZI	GCGATG	1 cut(s)	367
BtsCI	GGATG	8 cut(s)	85, 269, 1123, 1236, 1576, 1597, 1661, 1807
BtsI	GCAGTG	1 cut(s)	607
BtsIMutI	CAGTG	3 cut(s)	204, 607, 1116
BveI	ACCTGC	1 cut(s)	2031
Cac8I	GCNNGC	3 cut(s)	733, 804, 2031
CaiI	CAGNNNCTG	5 cut(s)	808, 1624, 2039, 2054, 2183
CfoI	GCGC	1 cut(s)	908
ClaI	ATCGAT	1 cut(s)	1386
CseI	GACGC	3 cut(s)	374, 609, 653
Csp6I	GTAC	1 cut(s)	440
CviAII	CATG	4 cut(s)	40, 866, 1819, 2202
CviQI	GTAC	1 cut(s)	440
DpnI	GATC	8 cut(s)	129, 255, 260, 567, 584, 887, 1230, 2007
DpnII	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
DrdI	GACNNNNNNGTC	1 cut(s)	206
DriI	GACNNNNNGTC	1 cut(s)	2106
DseDI	GACNNNNNNGTC	1 cut(s)	206
EaeI	YGGCCR	4 cut(s)	756, 813, 1437, 1932
EagI	CGGCCG	1 cut(s)	756
Eam1104I	CTCTTC	7 cut(s)	6, 197, 720, 791, 988, 1851, 2091
Eam1105I	GACNNNNNGTC	1 cut(s)	2106
EarI	CTCTTC	7 cut(s)	6, 197, 720, 791, 988, 1851, 2091
EciI	GGCGGA	2 cut(s)	141, 622
Ecl136II	GAGCTC	1 cut(s)	556
EclXI	CGGCCG	1 cut(s)	756
Eco130I	CCWWGG	3 cut(s)	1023, 1911, 2061
Eco147I	AGGCCT	1 cut(s)	731
Eco24I	GRGCYC	1 cut(s)	558
Eco52I	CGGCCG	1 cut(s)	756
Eco53kI	GAGCTC	1 cut(s)	556
Eco57I	CTGAAG	7 cut(s)	561, 1038, 1092, 1601, 2061, 2076, 2181
EcoICRI	GAGCTC	1 cut(s)	556
EcoNI	CCTNNNNNAGG	2 cut(s)	634, 1400
EcoRI	GAATTC	1 cut(s)	280
EcoRII	CCWGG	4 cut(s)	635, 1439, 1520, 1934
EcoT14I	CCWWGG	3 cut(s)	1023, 1911, 2061
EcoT22I	ATGCAT	1 cut(s)	867
EcoT38I	GRGCYC	1 cut(s)	558
ErhI	CCWWGG	3 cut(s)	1023, 1911, 2061
Esp3I	CGTCTC	1 cut(s)	746
FaeI	CATG	4 cut(s)	43, 869, 1822, 2205
FalI	AAGNNNNNCTT	2 cut(s)	1317, 1349
FatI	CATG	4 cut(s)	39, 865, 1818, 2201
FblI	GTMKAC	3 cut(s)	852, 1807, 2110
FokI	GGATG	8 cut(s)	72, 256, 1130, 1223, 1583, 1604, 1648, 1814
FriOI	GRGCYC	1 cut(s)	558
FspBI	CTAG	5 cut(s)	236, 710, 1187, 1314, 1541
GlaI	GCGC	1 cut(s)	907
GsaI	CCCAGC	1 cut(s)	417
GsuI	CTGGAG	1 cut(s)	1196
HaeIII	GGCC	8 cut(s)	731, 758, 815, 1307, 1439, 1778, 1829, 1934
HapII	CCGG	5 cut(s)	292, 312, 551, 559, 1275
HgaI	GACGC	3 cut(s)	374, 609, 653
HhaI	GCGC	1 cut(s)	908
Hin1I	GRCGYC	3 cut(s)	366, 375, 620
Hin1II	CATG	4 cut(s)	43, 869, 1822, 2205
Hin6I	GCGC	1 cut(s)	906
HinP1I	GCGC	1 cut(s)	906
HincII	GTYRAC	3 cut(s)	853, 1368, 1876
HindII	GTYRAC	3 cut(s)	853, 1368, 1876
HindIII	AAGCTT	2 cut(s)	1559, 1847
HpaII	CCGG	5 cut(s)	292, 312, 551, 559, 1275
HphI	GGTGA	3 cut(s)	1082, 1207, 2015
Hpy166II	GTNNAC	5 cut(s)	853, 1368, 1808, 1876, 2111
Hpy188I	TCNGA	9 cut(s)	76, 172, 199, 258, 824, 1538, 1567, 1837, 2056
Hpy8I	GTNNAC	5 cut(s)	853, 1368, 1808, 1876, 2111
Hpy99I	CGWCG	4 cut(s)	185, 368, 392, 536
HpyAV	CCTTC	3 cut(s)	429, 634, 1198
HpyCH4III	ACNGT	5 cut(s)	208, 1094, 1347, 1626, 1873
HpyCH4IV	ACGT	1 cut(s)	375
HpySE526I	ACGT	1 cut(s)	375
Hsp92I	GRCGYC	3 cut(s)	366, 375, 620
Hsp92II	CATG	4 cut(s)	43, 869, 1822, 2205
HspAI	GCGC	1 cut(s)	906
Kpn2I	TCCGGA	1 cut(s)	550
Kzo9I	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
LmnI	GCTCC	6 cut(s)	154, 553, 561, 1405, 1418, 1587
LweI	GCATC	9 cut(s)	328, 817, 835, 925, 1063, 1278, 1378, 1670, 2189
MaeI	CTAG	5 cut(s)	236, 710, 1187, 1314, 1541
MaeII	ACGT	1 cut(s)	375
MaeIII	GTNAC	4 cut(s)	326, 770, 1232, 1316
MalI	GATC	8 cut(s)	129, 255, 260, 567, 584, 887, 1230, 2007
MboI	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
MfeI	CAATTG	1 cut(s)	648
MflI	RGATCY	2 cut(s)	127, 253
MhlI	GDGCHC	4 cut(s)	558, 607, 1902, 2139
MlsI	TGGCCA	1 cut(s)	1439
MluNI	TGGCCA	1 cut(s)	1439
MlyI	GAGTC	6 cut(s)	71, 541, 848, 1472, 1504, 2045
MmeI	TCCRAC	8 cut(s)	99, 222, 543, 943, 1264, 1329, 1609, 2145
Mox20I	TGGCCA	1 cut(s)	1439
Mph1103I	ATGCAT	1 cut(s)	867
MroI	TCCGGA	1 cut(s)	550
MroXI	GAANNNNTTC	2 cut(s)	191, 397
MscI	TGGCCA	1 cut(s)	1439
MseI	TTAA	4 cut(s)	317, 962, 1088, 1863
Msp20I	TGGCCA	1 cut(s)	1439
MspA1I	CMGCKG	1 cut(s)	721
MspI	CCGG	5 cut(s)	292, 312, 551, 559, 1275
MspR9I	CCNGG	5 cut(s)	292, 637, 1441, 1522, 1936
MunI	CAATTG	1 cut(s)	648
Mva1269I	GAATGC	1 cut(s)	1644
MvaI	CCWGG	4 cut(s)	637, 1441, 1522, 1936
NciI	CCSGG	1 cut(s)	292
NdeII	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
NlaIII	CATG	4 cut(s)	43, 869, 1822, 2205
NlaIV	GGNNCC	1 cut(s)	394
NmeAIII	GCCGAG	1 cut(s)	613
NmuCI	GTSAC	2 cut(s)	770, 1232
NsiI	ATGCAT	1 cut(s)	867
PceI	AGGCCT	1 cut(s)	731
PcsI	WCGNNNNNNNCGW	2 cut(s)	372, 756
PctI	GAATGC	1 cut(s)	1644
PdmI	GAANNNNTTC	2 cut(s)	191, 397
PfeI	GAWTC	7 cut(s)	23, 109, 321, 398, 1055, 1136, 1698
PfoI	TCCNGGA	1 cut(s)	290
PleI	GAGTC	6 cut(s)	71, 541, 848, 1471, 1503, 2045
PpsI	GAGTC	6 cut(s)	71, 541, 848, 1471, 1503, 2045
Psp124BI	GAGCTC	1 cut(s)	558
Psp6I	CCWGG	4 cut(s)	635, 1439, 1520, 1934
PspFI	CCCAGC	1 cut(s)	413
PspGI	CCWGG	4 cut(s)	635, 1439, 1520, 1934
PspN4I	GGNNCC	1 cut(s)	394
PstI	CTGCAG	2 cut(s)	1453, 1603
PstNI	CAGNNNCTG	5 cut(s)	808, 1624, 2039, 2054, 2183
PsuI	RGATCY	2 cut(s)	127, 253
PvuII	CAGCTG	1 cut(s)	721
RsaI	GTAC	1 cut(s)	441
RsaNI	GTAC	1 cut(s)	440
SacI	GAGCTC	1 cut(s)	558
SalI	GTCGAC	1 cut(s)	851
SaqAI	TTAA	4 cut(s)	317, 962, 1088, 1863
Sau3AI	GATC	8 cut(s)	127, 253, 258, 565, 582, 885, 1228, 2005
SchI	GAGTC	6 cut(s)	71, 541, 848, 1472, 1504, 2045
ScrFI	CCNGG	5 cut(s)	292, 637, 1441, 1522, 1936
SduI	GDGCHC	4 cut(s)	558, 607, 1902, 2139
SfaNI	GCATC	9 cut(s)	328, 817, 835, 925, 1063, 1278, 1378, 1670, 2189
SfcI	CTRYAG	2 cut(s)	1449, 1599
SmlI	CTYRAG	2 cut(s)	1841, 1850
SmoI	CTYRAG	2 cut(s)	1841, 1850
SseBI	AGGCCT	1 cut(s)	731
SsiI	CCGC	7 cut(s)	152, 309, 617, 633, 668, 816, 891
SspMI	CTAG	5 cut(s)	236, 710, 1187, 1314, 1541
SstI	GAGCTC	1 cut(s)	558
StuI	AGGCCT	1 cut(s)	731
StyD4I	CCNGG	5 cut(s)	290, 635, 1439, 1520, 1934
StyI	CCWWGG	3 cut(s)	1023, 1911, 2061
TaaI	ACNGT	5 cut(s)	208, 1094, 1347, 1626, 1873
TaiI	ACGT	1 cut(s)	378
TaqI	TCGA	9 cut(s)	33, 51, 180, 284, 363, 471, 750, 852, 1386
TauI	GCSGC	5 cut(s)	311, 620, 671, 818, 893
TfiI	GAWTC	7 cut(s)	23, 109, 321, 398, 1055, 1136, 1698
Tru1I	TTAA	4 cut(s)	317, 962, 1088, 1863
Tru9I	TTAA	4 cut(s)	317, 962, 1088, 1863
TscAI	CASTG	3 cut(s)	211, 607, 1116
TseFI	GTSAC	2 cut(s)	770, 1232
Tsp45I	GTSAC	2 cut(s)	770, 1232
TspDTI	ATGAA	2 cut(s)	999, 1675
TspGWI	ACGGA	3 cut(s)	405, 1004, 1181
TspRI	CASTG	3 cut(s)	211, 607, 1116
XagI	CCTNNNNNAGG	2 cut(s)	634, 1400
XapI	RAATTY	2 cut(s)	280, 1744
XbaI	TCTAGA	1 cut(s)	709
XmiI	GTMKAC	3 cut(s)	852, 1807, 2110
XmnI	GAANNNNTTC	2 cut(s)	191, 397
XspI	CTAG	5 cut(s)	236, 710, 1187, 1314, 1541
ZraI	GACGTC	1 cut(s)	376
Zsp2I	ATGCAT	1 cut(s)	867

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.