Prupe.1G553500_v2.0.a1

CBS domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
45222201 .. 45228670
6470 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G553500.1

Sequence Viewer

Length: 1623 bp
ATGAGCAACCAAGTAGGTGTCCGGAGGACCAGTCTGAGCCAGAAACGCGGTCCCTCCGCTGCGATTAAGAAATCGGTCCCTCCCGAAAATGGAACCTCCAATGGCACCACCAGCAAACCCTCGTCTCCTCCTCACCCCCTTTCGTCTGGTGGTGGGGAAAGGACGGTGAAGAAGCTAAGGTTGTCAAAAGCCCTAACTATTCCGGAGGGGACTACAGTATCCGATGCATGTCGGAGGATGGCGGCTCGCCGTGTGGATGCTGTGCTCTTAACTGATGCAAATGCGTTGCTTTCAGGAATTGTGACAGACAAGGACATTTTGGCTAGAGTCATTGCGGAGGGGTTGAGACCGGAGCAAACAATTGTATCAAAAATCATGACGCGGAATCCTATTTTTGTTAATTCTGATTCATTAGCCCTTGAAGCTCTCCAGAAGATGGTCCAAGGTAAATTCAGGCACCTCCCTGTTGTAGAGAATGGTGAAGTTATTGCCTTGTTAGATATCACCAAATGTCTCTATGATGCTATATCAAGAATGGAGAAGGCAGCGGAGCAGGGGAGTGCCATTGCTGCTGCAGTTGAAGGAGTGGAGCGCCAGTGGGGAGCCAATTTATCTGCTCCATATGCTTTTCTGGAAACTCTGAGGGAGCGAATGTTCAAGCCTTCCCTAGCAACTATCATTGGTGAAAATACGAAGGTTGCAATTGTTTCCCCATCAGATCCTGTCTATGTTGCAGCAAAAAGGATGCGGGAGTTTCGGATGAATTCAGCTATAATCGCTACAGGGAACAAGATTCAGGGGATACTAACTTCAAAGGATATCCTTATGCGAGTTGTGGCACAAAATCTCTCTCCTGAGTTGACTCTGGTGGAAAAGGTAATGACGCCAAACCCTGAGTGTGCCATGCTAGAGACAACAATCCTTGATGCACTGCATATAATGCATGAAGGGAAGTTCTTACATCTTCCTGTCTTAGACAGAGATGGAAGTGTTGCTGCTTGTGTGGATGTTCTGCAGATAACTCATGCAGCTATTTCTATGGTTGAAAGTAGCTCAGGAACTGCTAACACTATGGCAAACACAATGATGCAAAAATTCTGGGATTCAGCACTTGCTTTGGAGCCACCTGATGATTGTGATACTCAAAGTGAATTGTCTGCATTAATGGCTTCTGATGGGACAGATGGAAAGTTCCCTTATCCTTCTCTTGGTCTTGGAAATTCATTTGCGTTCAAGTTTGAAGATCTCAGGGGTCGAATGCATCGGATCAATTGTGGCATGGAAAATTTAGATGAGCTGTTATCTGCTGTCATGCAAAGGATTGGTGCTGCTAATGATCACGATCGTCCTCATATATTGTTTGAAGATGATGAAGGTGATAGAGTTCTACTTGCAACTGATGATGATCTTGTTAGTGCCGTCAGCCATGCACGAGGAGTGGGACTGAAGGTTCTAAGGTTGCATCTGGATTTCACTGATTCTGGCCACAGAACCATATCGCAGTCAGGTACAACAACGGCCCAGAAAAAGGGATGGACGTCTCTCCATACTGGAGTTTTGGCAAGTGCTGCTGCTTTAACCAGCATTGGGGTGTTGGTCTACTTAAAGCGCACTAACCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

541

Amino Acids

58.27

Weight (kDa)

6.69

Isoelectric Point (pI)

37.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1541
AccB1I GGYRCC 2 cut(s) 104, 456
AccB7I CCANNNNNTGG 1 cut(s) 436
AccI GTMKAC 1 cut(s) 1599
AccII CGCG 2 cut(s) 48, 382
AccIII TCCGGA 2 cut(s) 21, 202
AciI CCGC 7 cut(s) 48, 57, 242, 335, 382, 548, 748
AclWI GGATC 2 cut(s) 713, 1274
AcoI YGGCCR 1 cut(s) 1483
AcsI RAATTY 5 cut(s) 449, 763, 1094, 1219, 1285
AcuI CTGAAG 1 cut(s) 1466
AcyI GRCGYC 2 cut(s) 884, 1538
AfaI GTAC 1 cut(s) 1510
AfiI CCNNNNNNNGG 5 cut(s) 89, 436, 1208, 1528, 1587
AgsI TTSAA 8 cut(s) 422, 581, 658, 813, 1046, 1234, 1241, 1364
AloI GAACNNNNNNTCC 4 cut(s) 638, 670, 1434, 1466
AluBI AGCT 6 cut(s) 175, 425, 770, 1031, 1053, 1297
AluI AGCT 6 cut(s) 175, 425, 770, 1031, 1053, 1297
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 5 cut(s) 129, 340, 518, 905, 1545
AlwI GGATC 2 cut(s) 713, 1274
AlwNI CAGNNNCTG 2 cut(s) 722, 1061
Aor13HI TCCGGA 2 cut(s) 21, 202
AoxI GGCC 2 cut(s) 1483, 1518
ApoI RAATTY 5 cut(s) 449, 763, 1094, 1219, 1285
AseI ATTAAT 1 cut(s) 1163
AspLEI GCGC 2 cut(s) 594, 1611
AspS9I GGNCC 5 cut(s) 27, 50, 76, 439, 1519
AsuHPI GGTGA 6 cut(s) 125, 178, 491, 496, 695, 1388
AvaII GGWCC 4 cut(s) 27, 50, 76, 439
BaeI ACNNNNGTAYC 4 cut(s) 201, 234, 348, 381
BalI TGGCCA 1 cut(s) 1485
BanI GGYRCC 2 cut(s) 104, 456
BauI CACGAG 1 cut(s) 1431
Bbv12I GWGCWC 1 cut(s) 267
BccI CCATC 7 cut(s) 232, 430, 721, 977, 1169, 1178, 1527
BceAI ACGGC 3 cut(s) 234, 1403, 1533
BciVI GTATCC 2 cut(s) 229, 795
BclI TGATCA 1 cut(s) 1336
BcoDI GTCTC 5 cut(s) 129, 340, 518, 905, 1545
BfaI CTAG 3 cut(s) 324, 668, 908
BfmI CTRYAG 4 cut(s) 213, 573, 780, 1013
BfoI RGCGCY 1 cut(s) 595
BfuI GTATCC 2 cut(s) 229, 795
BglII AGATCT 1 cut(s) 1243
Bme18I GGWCC 4 cut(s) 27, 50, 76, 439
BmgT120I GGNCC 5 cut(s) 27, 50, 76, 439, 1519
BmiI GGNNCC 7 cut(s) 52, 78, 94, 106, 458, 604, 1122
BmsI GCATC 9 cut(s) 214, 247, 265, 511, 735, 916, 1077, 1270, 1471
BpmI CTGGAG 2 cut(s) 413, 1572
Bpu10I CCTNAGC 2 cut(s) 176, 1054
BsaBI GATNNNNATC 2 cut(s) 1341, 1404
BsaHI GRCGYC 2 cut(s) 884, 1538
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 1 cut(s) 442
BsaWI WCCGGW 3 cut(s) 21, 202, 349
BsaXI ACNNNNNCTCC 6 cut(s) 16, 46, 581, 611, 638, 668
Bsc4I CCNNNNNNNGG 5 cut(s) 89, 436, 1208, 1528, 1587
Bse1I ACTGG 3 cut(s) 30, 595, 1555
Bse3DI GCAATG 2 cut(s) 330, 564
Bse8I GATNNNNATC 2 cut(s) 1341, 1404
BseAI TCCGGA 2 cut(s) 21, 202
BseDI CCNNGG 1 cut(s) 442
BseGI GGATG 6 cut(s) 243, 262, 750, 765, 1012, 1538
BseJI GATNNNNATC 2 cut(s) 1341, 1404
BseLI CCNNNNNNNGG 5 cut(s) 89, 436, 1208, 1528, 1587
BseMI GCAATG 2 cut(s) 330, 564
BseMII CTCAG 6 cut(s) 26, 632, 846, 885, 1068, 1261
BseNI ACTGG 3 cut(s) 30, 595, 1555
BseRI GAGGAG 3 cut(s) 117, 120, 1449
Bsh1236I CGCG 2 cut(s) 48, 382
Bsh1285I CGRYCG 1 cut(s) 1345
BshFI GGCC 2 cut(s) 1485, 1520
BshNI GGYRCC 2 cut(s) 104, 456
BsiEI CGRYCG 1 cut(s) 1345
BsiHKAI GWGCWC 1 cut(s) 267
BsiSI CCGG 3 cut(s) 22, 203, 350
BslFI GGGAC 5 cut(s) 36, 62, 223, 1192, 1455
BslI CCNNNNNNNGG 5 cut(s) 89, 436, 1208, 1528, 1587
BsmAI GTCTC 5 cut(s) 129, 340, 518, 905, 1545
BsmBI CGTCTC 2 cut(s) 129, 1545
BsmFI GGGAC 5 cut(s) 36, 62, 223, 1192, 1455
BsmI GAATGC 1 cut(s) 1263
BsnI GGCC 2 cut(s) 1485, 1520
Bso31I GGTCTC 1 cut(s) 340
Bsp1286I GDGCHC 1 cut(s) 267
Bsp13I TCCGGA 2 cut(s) 21, 202
Bsp143I GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
BspACI CCGC 7 cut(s) 48, 57, 242, 335, 382, 548, 748
BspANI GGCC 2 cut(s) 1485, 1520
BspCNI CTCAG 6 cut(s) 27, 633, 847, 886, 1067, 1260
BspEI TCCGGA 2 cut(s) 21, 202
BspFNI CGCG 2 cut(s) 48, 382
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 7 cut(s) 52, 78, 94, 106, 458, 604, 1122
BspMAI CTGCAG 2 cut(s) 577, 1017
BspPI GGATC 2 cut(s) 713, 1274
BspT107I GGYRCC 2 cut(s) 104, 456
BspTNI GGTCTC 1 cut(s) 340
BsrDI GCAATG 2 cut(s) 330, 564
BsrI ACTGG 3 cut(s) 30, 595, 1555
BssECI CCNNGG 1 cut(s) 442
BssMI GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
BssNI GRCGYC 2 cut(s) 884, 1538
BssSI CACGAG 1 cut(s) 1431
BssT1I CCWWGG 1 cut(s) 442
Bst2BI CACGAG 1 cut(s) 1431
Bst4CI ACNGT 2 cut(s) 166, 217
BstACI GRCGYC 2 cut(s) 884, 1538
BstAPI GCANNNNNTGC 2 cut(s) 940, 1568
BstC8I GCNNGC 1 cut(s) 247
BstDEI CTNAG 9 cut(s) 35, 176, 641, 855, 894, 973, 1054, 1247, 1454
BstF5I GGATG 6 cut(s) 243, 262, 750, 765, 1012, 1538
BstFNI CGCG 2 cut(s) 48, 382
BstH2I RGCGCY 1 cut(s) 595
BstHHI GCGC 2 cut(s) 594, 1611
BstKTI GATC 6 cut(s) 721, 1246, 1269, 1339, 1345, 1408
BstMAI GTCTC 5 cut(s) 129, 340, 518, 905, 1545
BstMBI GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
BstMCI CGRYCG 1 cut(s) 1345
BstMWI GCNNNNNNNGC 9 cut(s) 45, 111, 422, 569, 623, 776, 940, 1166, 1568
BstNSI RCATGY 1 cut(s) 231
BstSFI CTRYAG 4 cut(s) 213, 573, 780, 1013
BstUI CGCG 2 cut(s) 48, 382
BstX2I RGATCY 2 cut(s) 718, 1243
BstYI RGATCY 2 cut(s) 718, 1243
BsuI GTATCC 2 cut(s) 229, 795
BsuRI GGCC 2 cut(s) 1485, 1520
BtsCI GGATG 6 cut(s) 243, 262, 750, 765, 1012, 1538
BtsI GCAGTG 1 cut(s) 929
BtsIMutI CAGTG 3 cut(s) 602, 929, 1473
Cac8I GCNNGC 1 cut(s) 247
CaiI CAGNNNCTG 2 cut(s) 722, 1061
CciI TCATGA 1 cut(s) 375
CfoI GCGC 2 cut(s) 594, 1611
Cfr13I GGNCC 5 cut(s) 27, 50, 76, 439, 1519
CseI GACGC 2 cut(s) 388, 892
Csp6I GTAC 1 cut(s) 1509
CviAII CATG 8 cut(s) 228, 376, 904, 944, 1025, 1279, 1312, 1427
CviQI GTAC 1 cut(s) 1509
DdeI CTNAG 9 cut(s) 35, 176, 641, 855, 894, 973, 1054, 1247, 1454
DpnI GATC 6 cut(s) 720, 1245, 1268, 1338, 1344, 1407
DpnII GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
EaeI YGGCCR 1 cut(s) 1483
Eco130I CCWWGG 1 cut(s) 442
Eco31I GGTCTC 1 cut(s) 340
Eco32I GATATC 2 cut(s) 502, 820
Eco47I GGWCC 4 cut(s) 27, 50, 76, 439
Eco57I CTGAAG 1 cut(s) 1466
EcoRI GAATTC 1 cut(s) 763
EcoRV GATATC 2 cut(s) 502, 820
EcoT14I CCWWGG 1 cut(s) 442
EcoT22I ATGCAT 3 cut(s) 229, 945, 1263
ErhI CCWWGG 1 cut(s) 442
Esp3I CGTCTC 2 cut(s) 129, 1545
FaeI CATG 8 cut(s) 231, 379, 907, 947, 1028, 1282, 1315, 1430
FaqI GGGAC 5 cut(s) 36, 62, 223, 1192, 1455
FatI CATG 8 cut(s) 227, 375, 903, 943, 1024, 1278, 1311, 1426
FauI CCCGC 1 cut(s) 741
FauNDI CATATG 1 cut(s) 622
FbaI TGATCA 1 cut(s) 1336
FblI GTMKAC 1 cut(s) 1599
FokI GGATG 6 cut(s) 250, 269, 757, 772, 1019, 1545
FspBI CTAG 3 cut(s) 324, 668, 908
GlaI GCGC 2 cut(s) 593, 1610
GsuI CTGGAG 2 cut(s) 413, 1572
HaeII RGCGCY 1 cut(s) 595
HaeIII GGCC 2 cut(s) 1485, 1520
HapII CCGG 3 cut(s) 22, 203, 350
HgaI GACGC 2 cut(s) 388, 892
HhaI GCGC 2 cut(s) 594, 1611
Hin1I GRCGYC 2 cut(s) 884, 1538
Hin1II CATG 8 cut(s) 231, 379, 907, 947, 1028, 1282, 1315, 1430
Hin6I GCGC 2 cut(s) 592, 1609
HinP1I GCGC 2 cut(s) 592, 1609
HincII GTYRAC 1 cut(s) 861
HindII GTYRAC 1 cut(s) 861
HinfI GANTC 7 cut(s) 327, 385, 407, 793, 862, 1103, 1478
HpaII CCGG 3 cut(s) 22, 203, 350
HphI GGTGA 6 cut(s) 125, 178, 491, 496, 695, 1388
Hpy166II GTNNAC 2 cut(s) 861, 1600
Hpy188I TCNGA 9 cut(s) 36, 223, 234, 406, 642, 718, 759, 1174, 1266
Hpy8I GTNNAC 2 cut(s) 861, 1600
HpyAV CCTTC 8 cut(s) 535, 575, 672, 688, 941, 1212, 1367, 1441
HpyCH4III ACNGT 2 cut(s) 166, 217
HpyCH4IV ACGT 1 cut(s) 1538
HpyF10VI GCNNNNNNNGC 9 cut(s) 45, 111, 422, 569, 623, 776, 940, 1166, 1568
HpyF3I CTNAG 9 cut(s) 35, 176, 641, 855, 894, 973, 1054, 1247, 1454
HpySE526I ACGT 1 cut(s) 1538
Hsp92I GRCGYC 2 cut(s) 884, 1538
Hsp92II CATG 8 cut(s) 231, 379, 907, 947, 1028, 1282, 1315, 1430
HspAI GCGC 2 cut(s) 592, 1609
Kpn2I TCCGGA 2 cut(s) 21, 202
Ksp22I TGATCA 1 cut(s) 1336
Kzo9I GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
LmnI GCTCC 7 cut(s) 352, 550, 589, 602, 622, 646, 1120
LweI GCATC 9 cut(s) 214, 247, 265, 511, 735, 916, 1077, 1270, 1471
MaeI CTAG 3 cut(s) 324, 668, 908
MaeII ACGT 1 cut(s) 1538
MaeIII GTNAC 1 cut(s) 301
MalI GATC 6 cut(s) 720, 1245, 1268, 1338, 1344, 1407
MboI GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
MboII GAAGA 5 cut(s) 181, 445, 956, 1253, 1376
MfeI CAATTG 3 cut(s) 360, 702, 1270
MflI RGATCY 2 cut(s) 718, 1243
MhlI GDGCHC 1 cut(s) 267
MlsI TGGCCA 1 cut(s) 1485
MluNI TGGCCA 1 cut(s) 1485
MlyI GAGTC 2 cut(s) 336, 856
MmeI TCCRAC 1 cut(s) 212
Mox20I TGGCCA 1 cut(s) 1485
Mph1103I ATGCAT 3 cut(s) 229, 945, 1263
MroI TCCGGA 2 cut(s) 21, 202
MscI TGGCCA 1 cut(s) 1485
MseI TTAA 6 cut(s) 66, 269, 399, 1163, 1577, 1604
MslI CAYNNNNRTG 2 cut(s) 1085, 1589
Msp20I TGGCCA 1 cut(s) 1485
MspA1I CMGCKG 2 cut(s) 59, 548
MspI CCGG 3 cut(s) 22, 203, 350
MunI CAATTG 3 cut(s) 360, 702, 1270
Mva1269I GAATGC 1 cut(s) 1263
MvnI CGCG 2 cut(s) 48, 382
MwoI GCNNNNNNNGC 9 cut(s) 45, 111, 422, 569, 623, 776, 940, 1166, 1568
NdeI CATATG 1 cut(s) 622
NdeII GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
NlaIII CATG 8 cut(s) 231, 379, 907, 947, 1028, 1282, 1315, 1430
NlaIV GGNNCC 7 cut(s) 52, 78, 94, 106, 458, 604, 1122
NmuCI GTSAC 1 cut(s) 301
NsiI ATGCAT 3 cut(s) 229, 945, 1263
NspI RCATGY 1 cut(s) 231
PagI TCATGA 1 cut(s) 375
PctI GAATGC 1 cut(s) 1263
PfeI GAWTC 5 cut(s) 385, 407, 793, 1103, 1478
PflMI CCANNNNNTGG 1 cut(s) 436
Ple19I CGATCG 1 cut(s) 1345
PleI GAGTC 2 cut(s) 335, 856
PpsI GAGTC 2 cut(s) 335, 856
PshBI ATTAAT 1 cut(s) 1163
PspN4I GGNNCC 7 cut(s) 52, 78, 94, 106, 458, 604, 1122
PspPI GGNCC 5 cut(s) 27, 50, 76, 439, 1519
PstI CTGCAG 2 cut(s) 577, 1017
PstNI CAGNNNCTG 2 cut(s) 722, 1061
PsuI RGATCY 2 cut(s) 718, 1243
PvuI CGATCG 1 cut(s) 1345
RsaI GTAC 1 cut(s) 1510
RsaNI GTAC 1 cut(s) 1509
RseI CAYNNNNRTG 2 cut(s) 1085, 1589
SaqAI TTAA 6 cut(s) 66, 269, 399, 1163, 1577, 1604
Sau3AI GATC 6 cut(s) 718, 1243, 1266, 1336, 1342, 1405
Sau96I GGNCC 5 cut(s) 27, 50, 76, 439, 1519
SchI GAGTC 2 cut(s) 336, 856
SduI GDGCHC 1 cut(s) 267
SfaNI GCATC 9 cut(s) 214, 247, 265, 511, 735, 916, 1077, 1270, 1471
SfcI CTRYAG 4 cut(s) 213, 573, 780, 1013
SinI GGWCC 4 cut(s) 27, 50, 76, 439
SmiMI CAYNNNNRTG 2 cut(s) 1085, 1589
SsiI CCGC 7 cut(s) 48, 57, 242, 335, 382, 548, 748
SspMI CTAG 3 cut(s) 324, 668, 908
StyI CCWWGG 1 cut(s) 442
TaaI ACNGT 2 cut(s) 166, 217
TaiI ACGT 1 cut(s) 1541
TaqI TCGA 1 cut(s) 1255
TaqII GACCGA 1 cut(s) 64
TauI GCSGC 1 cut(s) 245
TfiI GAWTC 5 cut(s) 385, 407, 793, 1103, 1478
Tru1I TTAA 6 cut(s) 66, 269, 399, 1163, 1577, 1604
Tru9I TTAA 6 cut(s) 66, 269, 399, 1163, 1577, 1604
TscAI CASTG 3 cut(s) 602, 936, 1480
TseFI GTSAC 1 cut(s) 301
Tsp45I GTSAC 1 cut(s) 301
TspDTI ATGAA 5 cut(s) 399, 776, 960, 1212, 1386
TspRI CASTG 3 cut(s) 602, 936, 1480
Van91I CCANNNNNTGG 1 cut(s) 436
VpaK11BI GGWCC 4 cut(s) 27, 50, 76, 439
VspI ATTAAT 1 cut(s) 1163
XapI RAATTY 5 cut(s) 449, 763, 1094, 1219, 1285
XceI RCATGY 1 cut(s) 231
XmiI GTMKAC 1 cut(s) 1599
XspI CTAG 3 cut(s) 324, 668, 908
ZraI GACGTC 1 cut(s) 1539
Zsp2I ATGCAT 3 cut(s) 229, 945, 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.