Rh2AG305900

CBS domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
38545936 .. 38554387
8452 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG305900.1

Sequence Viewer

Length: 1494 bp
ATGAGCAGCCAAGTTGGTCTGAGGAGGACCAGTCTCACCCAGAAGCGCGGCCCCTCCACCGTCACTAAGAAATCGGTCCCAAGCGAGAACGGAGCCATCTCTAATGGCACCACCAGCAAACCCTCGTCTCCTCCTGCCCTTGCGACTGCTGGTGGAGAGAGGACAGTGAAGAAGCTGAGGTTGTCGAAAGCCCTCACAATCCCCGAGGGGACCACTGTATCCGATGCTTGCCGGAGGATGGCTGCTCGGCGTGTGGATGCTGTGCTTTTGACTGATGCAAATGCATTGCTTTCTGGAATTGTGACTGACAAGGACATTGCCAGTAGGGTCATTGCAGAGGGATTGAGACCGGAGCAGACAATTGTATCAAAGATCATGACGCGGAATCCTATTTTTGTTAATGCTGACTCATTGGCCATGGAAGCTCTACAGAAGATGATCCAGGGTAAATTTAGGCACCTTCCTGTTGTAGAGAATGGTGAGGTTATTGCCTTGTTGGATATCACAAAATGCCTCTATGATGCTATATCAAGAATGGAAAAGGCAGCTGAGCAGGGGAGTGCCATTGCTGCTGCAGTTGAAGGAGTTGAACGCCAGTGGGGAGCCAATTTTTCTGCTCCATATGCTTTTCTGGAAACTCTGAGGGAGCGAATGTTCAAGCCTTCATTGTCAACCATCATTGGTGAAAACACAAAGGTTGCAATTGTATCCCCATCAGATCCTGTCTATGTTGCGGCAAAAAGGATGCGGGACTTTCGGGTTAATTCAGTTATAATTGTCATGGGGAACAAGATTCAAGGGATACTCACTTCAAAGGATATTTTAATGCGAGTCGTGGCACAAAATCTTTCTCCTGAGTTGACTCTGGTGGAAAAGGTAATGACGCCGAACCCTGAATGTGCTACATTAGAGACTACAATTCTTGATGCACTGCATATAATGCATGAAGGGAAGTTCTTGCATCTTCCTGTCTTAGACAGAGATGAATCTGTTGCTGCATGTGTGGATGTTCTGCAGATAACTCACGCGGCAATCTCTATGGTTGAAAGTAGTTCAGGAAGCGTTAATGATATGGCAAACACAATGATGCAAAAGTTCTGGGATTCAGCACTTGCTTTAGAGCCGGCTGATGACTGTGATACTCAAAGTGAAATGTCTGCACTAATGGCTTCTGATGCGGCAGAACAAGCCAAGTTTACTTATCCTTCTATTGGTCTTGGAAATTCATTCGCCTTCAAGTTTGAAGATCGAAAAGGTCGAGTGCATCGACTCAATAGTGGCACAGAAAATTTAGATGAGCTTGTATCTGCTGTCATGCGAAGGACTGGTGGTGCTAAGGATAATGATCGTCCTCAGATTTTGTATGAAGATGATGAAGGTGATAGAGTTCTACTTGCAAGTGATGATGATCTTGTTAGCGCTGTCAGCCATGCTCGAGCAGTGGGACAGAAGGTAGTGTTTATGCTTCATATATTATTTTTTTCTAGAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

497

Amino Acids

53.94

Weight (kDa)

6.14

Isoelectric Point (pI)

41.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBS PF00571 62 - 110 3.3e-07 CBS domain
CBS PF00571 122 - 168 2.7e-09 CBS domain
CBS PF00571 230 - 278 8.7e-07 CBS domain
CBS PF00571 290 - 329 6.6e-06 CBS domain
PB1 PF00564 410 - 489 1.1e-12 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 773
AccB1I GGYRCC 2 cut(s) 107, 456
AccII CGCG 3 cut(s) 48, 382, 1028
AciI CCGC 6 cut(s) 48, 382, 734, 748, 1028, 1178
AclWI GGATC 2 cut(s) 433, 713
AcoI YGGCCR 1 cut(s) 414
AcsI RAATTY 3 cut(s) 449, 1222, 1288
AcyI GRCGYC 1 cut(s) 884
AfeI AGCGCT 1 cut(s) 1420
AfiI CCNNNNNNNGG 2 cut(s) 238, 1211
AgsI TTSAA 8 cut(s) 581, 590, 658, 797, 813, 1046, 1237, 1244
AjnI CCWGG 1 cut(s) 441
AloI GAACNNNNNNTCC 2 cut(s) 638, 670
AluBI AGCT 4 cut(s) 175, 425, 548, 1300
AluI AGCT 4 cut(s) 175, 425, 548, 1300
Alw26I GTCTC 4 cut(s) 38, 132, 340, 905
AlwI GGATC 2 cut(s) 433, 713
AlwNI CAGNNNCTG 1 cut(s) 722
Ama87I CYCGRG 2 cut(s) 203, 1434
Aor51HI AGCGCT 1 cut(s) 1420
AoxI GGCC 2 cut(s) 49, 414
ApeKI GCWGC 6 cut(s) 6, 242, 545, 569, 572, 995
ApoI RAATTY 3 cut(s) 449, 1222, 1288
AspLEI GCGC 2 cut(s) 48, 1421
AspS9I GGNCC 4 cut(s) 27, 50, 76, 210
AsuHPI GGTGA 4 cut(s) 28, 491, 695, 1391
AvaI CYCGRG 2 cut(s) 203, 1434
AvaII GGWCC 3 cut(s) 27, 76, 210
BaeI ACNNNNGTAYC 4 cut(s) 201, 234, 348, 381
BalI TGGCCA 1 cut(s) 416
BanI GGYRCC 2 cut(s) 107, 456
BbvCI CCTCAGC 1 cut(s) 176
BbvI GCAGC 6 cut(s) 18, 229, 556, 557, 559, 982
BccI CCATC 4 cut(s) 104, 232, 683, 721
BciT130I CCWGG 1 cut(s) 443
BciVI GTATCC 3 cut(s) 229, 718, 795
BcoDI GTCTC 4 cut(s) 38, 132, 340, 905
BfaI CTAG 1 cut(s) 1485
BfmI CTRYAG 3 cut(s) 428, 573, 1013
BfoI RGCGCY 1 cut(s) 1422
BfuI GTATCC 3 cut(s) 229, 718, 795
BlpI GCTNAGC 1 cut(s) 549
Bme1390I CCNGG 1 cut(s) 443
Bme18I GGWCC 3 cut(s) 27, 76, 210
BmeT110I CYCGRG 2 cut(s) 203, 1434
BmgT120I GGNCC 4 cut(s) 27, 50, 76, 210
BmiI GGNNCC 7 cut(s) 52, 78, 94, 109, 211, 458, 604
BmrFI CCNGG 1 cut(s) 443
Bpu10I CCTNAGC 2 cut(s) 176, 1335
Bpu1102I GCTNAGC 1 cut(s) 549
BsaBI GATNNNNATC 2 cut(s) 1344, 1407
BsaHI GRCGYC 1 cut(s) 884
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 3 cut(s) 204, 417, 442
BsaWI WCCGGW 1 cut(s) 349
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 638, 668
Bsc4I CCNNNNNNNGG 2 cut(s) 238, 1211
Bse118I RCCGGY 1 cut(s) 1123
Bse1I ACTGG 4 cut(s) 30, 321, 595, 1330
Bse3DI GCAATG 4 cut(s) 284, 315, 330, 564
Bse8I GATNNNNATC 2 cut(s) 1344, 1407
BseBI CCWGG 1 cut(s) 443
BseDI CCNNGG 3 cut(s) 204, 417, 442
BseGI GGATG 4 cut(s) 243, 262, 750, 1012
BseJI GATNNNNATC 2 cut(s) 1344, 1407
BseLI CCNNNNNNNGG 2 cut(s) 238, 1211
BseMI GCAATG 4 cut(s) 284, 315, 330, 564
BseMII CTCAG 6 cut(s) 11, 167, 540, 632, 846, 1367
BseNI ACTGG 4 cut(s) 30, 321, 595, 1330
BseRI GAGGAG 2 cut(s) 37, 120
BseXI GCAGC 6 cut(s) 18, 229, 556, 557, 559, 982
BsgI GTGCAG 1 cut(s) 1143
Bsh1236I CGCG 3 cut(s) 48, 382, 1028
BshFI GGCC 2 cut(s) 51, 416
BshNI GGYRCC 2 cut(s) 107, 456
BsiHKCI CYCGRG 2 cut(s) 203, 1434
BsiSI CCGG 3 cut(s) 232, 350, 1124
BslFI GGGAC 4 cut(s) 62, 223, 764, 1458
BslI CCNNNNNNNGG 2 cut(s) 238, 1211
BsmAI GTCTC 4 cut(s) 38, 132, 340, 905
BsmBI CGTCTC 1 cut(s) 132
BsmFI GGGAC 4 cut(s) 62, 223, 764, 1458
BsnI GGCC 2 cut(s) 51, 416
Bso31I GGTCTC 1 cut(s) 340
BsoBI CYCGRG 2 cut(s) 203, 1434
Bsp143I GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
Bsp1720I GCTNAGC 1 cut(s) 549
Bsp19I CCATGG 1 cut(s) 417
BspACI CCGC 6 cut(s) 48, 382, 734, 748, 1028, 1178
BspANI GGCC 2 cut(s) 51, 416
BspCNI CTCAG 6 cut(s) 12, 168, 541, 633, 847, 1366
BspFNI CGCG 3 cut(s) 48, 382, 1028
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 7 cut(s) 52, 78, 94, 109, 211, 458, 604
BspMAI CTGCAG 2 cut(s) 577, 1017
BspPI GGATC 2 cut(s) 433, 713
BspT107I GGYRCC 2 cut(s) 107, 456
BspTNI GGTCTC 1 cut(s) 340
BsrDI GCAATG 4 cut(s) 284, 315, 330, 564
BsrFI RCCGGY 1 cut(s) 1123
BsrI ACTGG 4 cut(s) 30, 321, 595, 1330
BssAI RCCGGY 1 cut(s) 1123
BssECI CCNNGG 3 cut(s) 204, 417, 442
BssMI GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
BssNI GRCGYC 1 cut(s) 884
BssT1I CCWWGG 1 cut(s) 417
Bst2UI CCWGG 1 cut(s) 443
Bst4CI ACNGT 4 cut(s) 61, 166, 217, 1136
BstACI GRCGYC 1 cut(s) 884
BstAPI GCANNNNNTGC 1 cut(s) 940
BstC8I GCNNGC 2 cut(s) 229, 1125
BstDEI CTNAG 9 cut(s) 20, 66, 176, 549, 641, 855, 973, 1335, 1353
BstDSI CCRYGG 1 cut(s) 417
BstF5I GGATG 4 cut(s) 243, 262, 750, 1012
BstFNI CGCG 3 cut(s) 48, 382, 1028
BstH2I RGCGCY 1 cut(s) 1422
BstHHI GCGC 2 cut(s) 48, 1421
BstKTI GATC 6 cut(s) 375, 441, 721, 1249, 1348, 1411
BstMAI GTCTC 4 cut(s) 38, 132, 340, 905
BstMBI GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
BstMWI GCNNNNNNNGC 9 cut(s) 114, 422, 569, 623, 940, 1166, 1175, 1187, 1425
BstNI CCWGG 1 cut(s) 443
BstNSI RCATGY 1 cut(s) 1002
BstSCI CCNGG 1 cut(s) 441
BstSFI CTRYAG 3 cut(s) 428, 573, 1013
BstUI CGCG 3 cut(s) 48, 382, 1028
BstV1I GCAGC 6 cut(s) 18, 229, 556, 557, 559, 982
BstX2I RGATCY 1 cut(s) 718
BstYI RGATCY 1 cut(s) 718
BsuI GTATCC 3 cut(s) 229, 718, 795
BsuRI GGCC 2 cut(s) 51, 416
BtgI CCRYGG 1 cut(s) 417
BtsCI GGATG 4 cut(s) 243, 262, 750, 1012
BtsI GCAGTG 2 cut(s) 929, 1446
BtsIMutI CAGTG 5 cut(s) 171, 213, 602, 929, 1446
Cac8I GCNNGC 2 cut(s) 229, 1125
CaiI CAGNNNCTG 1 cut(s) 722
CciI TCATGA 1 cut(s) 375
CfoI GCGC 2 cut(s) 48, 1421
Cfr10I RCCGGY 1 cut(s) 1123
Cfr13I GGNCC 4 cut(s) 27, 50, 76, 210
CseI GACGC 2 cut(s) 388, 892
CviAII CATG 7 cut(s) 376, 418, 781, 944, 999, 1315, 1430
DdeI CTNAG 9 cut(s) 20, 66, 176, 549, 641, 855, 973, 1335, 1353
DpnI GATC 6 cut(s) 374, 440, 720, 1248, 1347, 1410
DpnII GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
EaeI YGGCCR 1 cut(s) 414
Eco130I CCWWGG 1 cut(s) 417
Eco31I GGTCTC 1 cut(s) 340
Eco32I GATATC 1 cut(s) 502
Eco47I GGWCC 3 cut(s) 27, 76, 210
Eco47III AGCGCT 1 cut(s) 1420
Eco88I CYCGRG 2 cut(s) 203, 1434
EcoRII CCWGG 1 cut(s) 441
EcoRV GATATC 1 cut(s) 502
EcoT14I CCWWGG 1 cut(s) 417
EcoT22I ATGCAT 2 cut(s) 286, 945
ErhI CCWWGG 1 cut(s) 417
Esp3I CGTCTC 1 cut(s) 132
FaeI CATG 7 cut(s) 379, 421, 784, 947, 1002, 1318, 1433
FaqI GGGAC 4 cut(s) 62, 223, 764, 1458
FatI CATG 7 cut(s) 375, 417, 780, 943, 998, 1314, 1429
FauI CCCGC 1 cut(s) 741
FauNDI CATATG 1 cut(s) 622
FokI GGATG 4 cut(s) 250, 269, 757, 1019
FspBI CTAG 1 cut(s) 1485
GlaI GCGC 2 cut(s) 47, 1420
HaeII RGCGCY 1 cut(s) 1422
HaeIII GGCC 2 cut(s) 51, 416
HapII CCGG 3 cut(s) 232, 350, 1124
HgaI GACGC 2 cut(s) 388, 892
HhaI GCGC 2 cut(s) 48, 1421
Hin1I GRCGYC 1 cut(s) 884
Hin1II CATG 7 cut(s) 379, 421, 784, 947, 1002, 1318, 1433
Hin6I GCGC 2 cut(s) 46, 1419
HinP1I GCGC 2 cut(s) 46, 1419
HincII GTYRAC 2 cut(s) 672, 861
HindII GTYRAC 2 cut(s) 672, 861
HinfI GANTC 8 cut(s) 385, 407, 793, 831, 862, 986, 1103, 1269
HpaII CCGG 3 cut(s) 232, 350, 1124
HphI GGTGA 4 cut(s) 28, 491, 695, 1391
Hpy166II GTNNAC 3 cut(s) 672, 861, 1197
Hpy188I TCNGA 6 cut(s) 21, 223, 642, 718, 1174, 1356
Hpy188III TCNNGA 8 cut(s) 294, 376, 531, 632, 854, 923, 1056, 1485
Hpy8I GTNNAC 3 cut(s) 672, 861, 1197
HpyAV CCTTC 9 cut(s) 470, 575, 672, 941, 1215, 1243, 1314, 1370, 1444
HpyCH4III ACNGT 4 cut(s) 61, 166, 217, 1136
HpyF10VI GCNNNNNNNGC 9 cut(s) 114, 422, 569, 623, 940, 1166, 1175, 1187, 1425
HpyF3I CTNAG 9 cut(s) 20, 66, 176, 549, 641, 855, 973, 1335, 1353
Hsp92I GRCGYC 1 cut(s) 884
Hsp92II CATG 7 cut(s) 379, 421, 784, 947, 1002, 1318, 1433
HspAI GCGC 2 cut(s) 46, 1419
KroI GCCGGC 1 cut(s) 1123
KroNI GCCGGC 1 cut(s) 1125
Kzo9I GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
LmnI GCTCC 5 cut(s) 92, 352, 602, 622, 646
Lsp1109I GCAGC 6 cut(s) 18, 229, 556, 557, 559, 982
MaeI CTAG 1 cut(s) 1485
MaeIII GTNAC 2 cut(s) 61, 301
MalI GATC 6 cut(s) 374, 440, 720, 1248, 1347, 1410
MboI GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
MboII GAAGA 5 cut(s) 181, 445, 956, 1256, 1379
MfeI CAATTG 2 cut(s) 360, 702
MflI RGATCY 1 cut(s) 718
MlsI TGGCCA 1 cut(s) 416
MluNI TGGCCA 1 cut(s) 416
MlyI GAGTC 4 cut(s) 401, 840, 856, 1263
MmeI TCCRAC 1 cut(s) 477
Mox20I TGGCCA 1 cut(s) 416
Mph1103I ATGCAT 2 cut(s) 286, 945
MroNI GCCGGC 1 cut(s) 1123
MscI TGGCCA 1 cut(s) 416
MseI TTAA 5 cut(s) 399, 762, 824, 1065, 1492
MslI CAYNNNNRTG 1 cut(s) 1085
Msp20I TGGCCA 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 548
MspI CCGG 3 cut(s) 232, 350, 1124
MspR9I CCNGG 1 cut(s) 443
MunI CAATTG 2 cut(s) 360, 702
MvaI CCWGG 1 cut(s) 443
MvnI CGCG 3 cut(s) 48, 382, 1028
MwoI GCNNNNNNNGC 9 cut(s) 114, 422, 569, 623, 940, 1166, 1175, 1187, 1425
NaeI GCCGGC 1 cut(s) 1125
NcoI CCATGG 1 cut(s) 417
NdeI CATATG 1 cut(s) 622
NdeII GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
NgoMIV GCCGGC 1 cut(s) 1123
NlaIII CATG 7 cut(s) 379, 421, 784, 947, 1002, 1318, 1433
NlaIV GGNNCC 7 cut(s) 52, 78, 94, 109, 211, 458, 604
NmeAIII GCCGAG 1 cut(s) 226
NmuCI GTSAC 2 cut(s) 61, 301
NsiI ATGCAT 2 cut(s) 286, 945
NspI RCATGY 1 cut(s) 1002
PaeR7I CTCGAG 1 cut(s) 1434
PagI TCATGA 1 cut(s) 375
PcsI WCGNNNNNNNCGW 2 cut(s) 1255, 1264
PdiI GCCGGC 1 cut(s) 1125
PfeI GAWTC 4 cut(s) 385, 793, 986, 1103
PleI GAGTC 4 cut(s) 401, 839, 856, 1263
PpsI GAGTC 4 cut(s) 401, 839, 856, 1263
PsiI TTATAA 1 cut(s) 773
Psp6I CCWGG 1 cut(s) 441
PspGI CCWGG 1 cut(s) 441
PspN4I GGNNCC 7 cut(s) 52, 78, 94, 109, 211, 458, 604
PspPI GGNCC 4 cut(s) 27, 50, 76, 210
PspXI VCTCGAGB 1 cut(s) 1434
PstI CTGCAG 2 cut(s) 577, 1017
PstNI CAGNNNCTG 1 cut(s) 722
PsuI RGATCY 1 cut(s) 718
PvuII CAGCTG 1 cut(s) 548
RseI CAYNNNNRTG 1 cut(s) 1085
SaqAI TTAA 5 cut(s) 399, 762, 824, 1065, 1492
Sau3AI GATC 6 cut(s) 372, 438, 718, 1246, 1345, 1408
Sau96I GGNCC 4 cut(s) 27, 50, 76, 210
SchI GAGTC 4 cut(s) 401, 840, 856, 1263
ScrFI CCNGG 1 cut(s) 443
SfcI CTRYAG 3 cut(s) 428, 573, 1013
Sfr274I CTCGAG 1 cut(s) 1434
SinI GGWCC 3 cut(s) 27, 76, 210
SlaI CTCGAG 1 cut(s) 1434
SmiMI CAYNNNNRTG 1 cut(s) 1085
SmlI CTYRAG 1 cut(s) 1434
SmoI CTYRAG 1 cut(s) 1434
SsiI CCGC 6 cut(s) 48, 382, 734, 748, 1028, 1178
SspMI CTAG 1 cut(s) 1485
StyD4I CCNGG 1 cut(s) 441
StyI CCWWGG 1 cut(s) 417
TaaI ACNGT 4 cut(s) 61, 166, 217, 1136
TaqI TCGA 5 cut(s) 185, 1249, 1258, 1267, 1435
TaqII GACCGA 1 cut(s) 64
TauI GCSGC 4 cut(s) 51, 737, 1031, 1181
TfiI GAWTC 4 cut(s) 385, 793, 986, 1103
Tru1I TTAA 5 cut(s) 399, 762, 824, 1065, 1492
Tru9I TTAA 5 cut(s) 399, 762, 824, 1065, 1492
TscAI CASTG 5 cut(s) 171, 220, 602, 936, 1446
TseFI GTSAC 2 cut(s) 61, 301
TseI GCWGC 6 cut(s) 6, 242, 545, 569, 572, 995
Tsp45I GTSAC 2 cut(s) 61, 301
TspDTI ATGAA 7 cut(s) 654, 960, 999, 1215, 1380, 1389, 1457
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 5 cut(s) 171, 220, 602, 936, 1446
VpaK11BI GGWCC 3 cut(s) 27, 76, 210
XapI RAATTY 3 cut(s) 449, 1222, 1288
XbaI TCTAGA 1 cut(s) 1484
XceI RCATGY 1 cut(s) 1002
XhoI CTCGAG 1 cut(s) 1434
XspI CTAG 1 cut(s) 1485
Zsp2I ATGCAT 2 cut(s) 286, 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.