Rmu_sc0004915.1_g000016

CBS domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004915.1
Physical Location & Seq
Reverse (-)
98739 .. 105351
6613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004915.1_g000016.1.cds

Sequence Viewer

Length: 1512 bp
atgagcagccaagttggcatgaggaggaccagtctcacccagaagcgcggcccctccaccgtcactaagaaatcggttccaagtgagaacggagccatctctaatggcaccaccagcaaaccctcgtctcctcctgcccttgcgactgctggtggagagaggacagtgaagaagctgaggttgtcgaaagccctcacaatccccgaggggaccactgtatccgatgcttgccggaggatggctgctcggcgtgtggatgctgtgcttttgaccgatgcaaatgcattgctttctggaattgtgactgacaaggacattgccagtagggtcattgcagagggattgagaccggagcagacaattgtatcaaagatcatgacgcggaatcctatttttgttaatgctgactcattggccatggaagctctacagaagatgatccagggtaaatttaggcaccttcctgttgtagaaaatggtgaggttattgccttgttggatatcacaaaatgcctctatgatgctatatcaagaatggaaaaggcagctgagcaggggagtgccattgctgctgcagttgaaggagttgaacgccagtggggagccaatttttctgctccatatgcttttctggaaactctgagggagcgaatgttcaagccgtcattgtcaaccatcattggtgaaaacacaaattcaaaggatattttaatgcgagtcgtggcacaaaatctttctcctgagttgactctggtggaaaaggtaatgacgccgaaccctgaatgtgctacattagagactacaattcttgatgcactgcatataatgcatgaagggaagttcttgcatcttcctgtcttagacagagatgaatctgttgctgcatgtgtggatgttctgcagataactcacgcggcaatctctatggttgaaagtagttcaggaaccgttaatgatatggcaaacacaatgatgcaaaagttctgggattcagcacttgctttagagccggctgatgactgtgatactcaaagtgaaatgtctgcactaatggcttctgatgcggcagaacaagccaagtttacttatccttctattggtcttggaaattcattcgccttcaagtttgaagatcgaaaaggtcgagtgcatcgactcaatagtggcacagaaaatttagatgagcttgtatctgctgtcatgcaaaggactggtggtgctaaggataacgatcgtcctcagattttgtatgaagatgatgaaggtgatagagttctacttgcaagtgatgatgatcttgttagtgctgtcagccatgctcgagcagtgggacagaaggtcctaaggttgcatctggatttctctgattctgggcaccaaatcacatcccaattgagtaaaaccacaacccagaaaatgggatggacgtattcgcacactggaattttggcaggtgcctgtgttttaactggcattggcttgatggcgtacataaagcgcactaatctgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

503

Amino Acids

54.46

Weight (kDa)

5.88

Isoelectric Point (pI)

37.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1442
Acc36I ACCTGC 1 cut(s) 1442
AccB1I GGYRCC 4 cut(s) 107, 456, 1374, 1454
AccB7I CCANNNNNTGG 1 cut(s) 1417
AccII CGCG 3 cut(s) 48, 382, 914
AciI CCGC 4 cut(s) 48, 382, 914, 1064
AclWI GGATC 1 cut(s) 433
AcoI YGGCCR 1 cut(s) 414
AcsI RAATTY 5 cut(s) 449, 694, 1108, 1174, 1443
AcyI GRCGYC 1 cut(s) 770
AfaI GTAC 1 cut(s) 1490
AfiI CCNNNNNNNGG 3 cut(s) 238, 1097, 1417
AgsI TTSAA 7 cut(s) 581, 590, 658, 699, 932, 1123, 1130
AhdI GACNNNNNGTC 1 cut(s) 1337
AjnI CCWGG 1 cut(s) 441
AloI GAACNNNNNNTCC 2 cut(s) 638, 670
AluBI AGCT 4 cut(s) 175, 425, 548, 1186
AluI AGCT 4 cut(s) 175, 425, 548, 1186
Alw26I GTCTC 4 cut(s) 38, 132, 340, 791
AlwI GGATC 1 cut(s) 433
Ama87I CYCGRG 2 cut(s) 203, 1320
AoxI GGCC 2 cut(s) 49, 414
ApeKI GCWGC 6 cut(s) 6, 242, 545, 569, 572, 881
ApoI RAATTY 5 cut(s) 449, 694, 1108, 1174, 1443
AspLEI GCGC 2 cut(s) 48, 1500
AspS9I GGNCC 4 cut(s) 27, 50, 210, 1339
AsuHPI GGTGA 4 cut(s) 28, 491, 695, 1277
AvaI CYCGRG 2 cut(s) 203, 1320
AvaII GGWCC 3 cut(s) 27, 210, 1339
AxyI CCTNAGG 1 cut(s) 1343
BaeGI GKGCMC 1 cut(s) 1377
BaeI ACNNNNGTAYC 4 cut(s) 201, 234, 348, 381
BalI TGGCCA 1 cut(s) 416
BanI GGYRCC 4 cut(s) 107, 456, 1374, 1454
BbvCI CCTCAGC 1 cut(s) 176
BbvI GCAGC 6 cut(s) 18, 229, 556, 557, 559, 868
BccI CCATC 5 cut(s) 104, 232, 683, 1416, 1477
BceAI ACGGC 1 cut(s) 646
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BciT130I CCWGG 1 cut(s) 443
BciVI GTATCC 1 cut(s) 229
BcoDI GTCTC 4 cut(s) 38, 132, 340, 791
BfmI CTRYAG 3 cut(s) 428, 573, 899
BfuAI ACCTGC 1 cut(s) 1442
BfuI GTATCC 1 cut(s) 229
BglI GCCNNNNNGGC 1 cut(s) 15
BisI GCNGC 9 cut(s) 7, 49, 243, 546, 570, 573, 882, 915, 1065
BlpI GCTNAGC 1 cut(s) 549
BlsI GCNGC 9 cut(s) 8, 50, 244, 547, 571, 574, 883, 916, 1066
Bme1390I CCNGG 1 cut(s) 443
Bme18I GGWCC 3 cut(s) 27, 210, 1339
BmeRI GACNNNNNGTC 1 cut(s) 1337
BmeT110I CYCGRG 2 cut(s) 203, 1320
BmgT120I GGNCC 4 cut(s) 27, 50, 210, 1339
BmrFI CCNGG 1 cut(s) 443
Bpu10I CCTNAGC 2 cut(s) 176, 1221
Bpu1102I GCTNAGC 1 cut(s) 549
BsaBI GATNNNNATC 2 cut(s) 1230, 1293
BsaHI GRCGYC 1 cut(s) 770
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 3 cut(s) 204, 417, 442
BsaWI WCCGGW 1 cut(s) 349
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 638, 668
Bsc4I CCNNNNNNNGG 3 cut(s) 238, 1097, 1417
Bse118I RCCGGY 1 cut(s) 1009
Bse1I ACTGG 6 cut(s) 30, 321, 595, 1216, 1444, 1474
Bse21I CCTNAGG 1 cut(s) 1343
Bse3DI GCAATG 4 cut(s) 284, 315, 330, 564
Bse8I GATNNNNATC 2 cut(s) 1230, 1293
BseBI CCWGG 1 cut(s) 443
BseDI CCNNGG 3 cut(s) 204, 417, 442
BseGI GGATG 5 cut(s) 243, 262, 898, 1385, 1427
BseJI GATNNNNATC 2 cut(s) 1230, 1293
BseLI CCNNNNNNNGG 3 cut(s) 238, 1097, 1417
BseMI GCAATG 4 cut(s) 284, 315, 330, 564
BseMII CTCAG 5 cut(s) 167, 540, 632, 732, 1253
BseNI ACTGG 6 cut(s) 30, 321, 595, 1216, 1444, 1474
BseRI GAGGAG 2 cut(s) 37, 120
BseSI GKGCMC 1 cut(s) 1377
BseXI GCAGC 6 cut(s) 18, 229, 556, 557, 559, 868
BsgI GTGCAG 1 cut(s) 1029
Bsh1236I CGCG 3 cut(s) 48, 382, 914
Bsh1285I CGRYCG 1 cut(s) 1234
BshFI GGCC 2 cut(s) 51, 416
BshNI GGYRCC 4 cut(s) 107, 456, 1374, 1454
BsiEI CGRYCG 1 cut(s) 1234
BsiHKCI CYCGRG 2 cut(s) 203, 1320
BsiSI CCGG 3 cut(s) 232, 350, 1010
BslFI GGGAC 2 cut(s) 223, 1344
BslI CCNNNNNNNGG 3 cut(s) 238, 1097, 1417
BsmAI GTCTC 4 cut(s) 38, 132, 340, 791
BsmBI CGTCTC 1 cut(s) 132
BsmFI GGGAC 2 cut(s) 223, 1344
BsnI GGCC 2 cut(s) 51, 416
Bso31I GGTCTC 1 cut(s) 340
BsoBI CYCGRG 2 cut(s) 203, 1320
Bsp1286I GDGCHC 1 cut(s) 1377
Bsp143I GATC 5 cut(s) 372, 438, 1132, 1231, 1294
Bsp1720I GCTNAGC 1 cut(s) 549
Bsp19I CCATGG 1 cut(s) 417
BspACI CCGC 4 cut(s) 48, 382, 914, 1064
BspANI GGCC 2 cut(s) 51, 416
BspCNI CTCAG 5 cut(s) 168, 541, 633, 733, 1252
BspFNI CGCG 3 cut(s) 48, 382, 914
BspHI TCATGA 1 cut(s) 375
BspMAI CTGCAG 2 cut(s) 577, 903
BspMI ACCTGC 1 cut(s) 1442
BspPI GGATC 1 cut(s) 433
BspT107I GGYRCC 4 cut(s) 107, 456, 1374, 1454
BspTNI GGTCTC 1 cut(s) 340
BsrDI GCAATG 4 cut(s) 284, 315, 330, 564
BsrFI RCCGGY 1 cut(s) 1009
BsrI ACTGG 6 cut(s) 30, 321, 595, 1216, 1444, 1474
BssAI RCCGGY 1 cut(s) 1009
BssECI CCNNGG 3 cut(s) 204, 417, 442
BssMI GATC 5 cut(s) 372, 438, 1132, 1231, 1294
BssNI GRCGYC 1 cut(s) 770
BssT1I CCWWGG 1 cut(s) 417
Bst2UI CCWGG 1 cut(s) 443
Bst4CI ACNGT 5 cut(s) 61, 166, 217, 949, 1022
BstACI GRCGYC 1 cut(s) 770
BstAPI GCANNNNNTGC 1 cut(s) 826
BstC8I GCNNGC 2 cut(s) 229, 1011
BstDEI CTNAG 9 cut(s) 66, 176, 549, 641, 741, 859, 1221, 1239, 1343
BstDSI CCRYGG 1 cut(s) 417
BstF5I GGATG 5 cut(s) 243, 262, 898, 1385, 1427
BstFNI CGCG 3 cut(s) 48, 382, 914
BstHHI GCGC 2 cut(s) 48, 1500
BstKTI GATC 5 cut(s) 375, 441, 1135, 1234, 1297
BstMAI GTCTC 4 cut(s) 38, 132, 340, 791
BstMBI GATC 5 cut(s) 372, 438, 1132, 1231, 1294
BstMCI CGRYCG 1 cut(s) 1234
BstMWI GCNNNNNNNGC 9 cut(s) 15, 114, 422, 569, 623, 826, 1052, 1061, 1073
BstNI CCWGG 1 cut(s) 443
BstNSI RCATGY 1 cut(s) 888
BstSCI CCNGG 1 cut(s) 441
BstSFI CTRYAG 3 cut(s) 428, 573, 899
BstSLI GKGCMC 1 cut(s) 1377
BstUI CGCG 3 cut(s) 48, 382, 914
BstV1I GCAGC 6 cut(s) 18, 229, 556, 557, 559, 868
Bsu36I CCTNAGG 1 cut(s) 1343
BsuI GTATCC 1 cut(s) 229
BsuRI GGCC 2 cut(s) 51, 416
BtgI CCRYGG 1 cut(s) 417
BtsCI GGATG 5 cut(s) 243, 262, 898, 1385, 1427
BtsI GCAGTG 2 cut(s) 815, 1332
BtsIMutI CAGTG 6 cut(s) 171, 213, 602, 815, 1332, 1437
BveI ACCTGC 1 cut(s) 1442
Cac8I GCNNGC 2 cut(s) 229, 1011
CciI TCATGA 1 cut(s) 375
CfoI GCGC 2 cut(s) 48, 1500
Cfr10I RCCGGY 1 cut(s) 1009
Cfr13I GGNCC 4 cut(s) 27, 50, 210, 1339
CseI GACGC 2 cut(s) 388, 778
Csp6I GTAC 1 cut(s) 1489
CviAII CATG 7 cut(s) 19, 376, 418, 830, 885, 1201, 1316
CviQI GTAC 1 cut(s) 1489
DdeI CTNAG 9 cut(s) 66, 176, 549, 641, 741, 859, 1221, 1239, 1343
DpnI GATC 5 cut(s) 374, 440, 1134, 1233, 1296
DpnII GATC 5 cut(s) 372, 438, 1132, 1231, 1294
DriI GACNNNNNGTC 1 cut(s) 1337
EaeI YGGCCR 1 cut(s) 414
Eam1105I GACNNNNNGTC 1 cut(s) 1337
Eco130I CCWWGG 1 cut(s) 417
Eco31I GGTCTC 1 cut(s) 340
Eco32I GATATC 1 cut(s) 502
Eco47I GGWCC 3 cut(s) 27, 210, 1339
Eco81I CCTNAGG 1 cut(s) 1343
Eco88I CYCGRG 2 cut(s) 203, 1320
EcoO109I RGGNCCY 1 cut(s) 1339
EcoRII CCWGG 1 cut(s) 441
EcoRV GATATC 1 cut(s) 502
EcoT14I CCWWGG 1 cut(s) 417
EcoT22I ATGCAT 2 cut(s) 286, 831
ErhI CCWWGG 1 cut(s) 417
Esp3I CGTCTC 1 cut(s) 132
FaeI CATG 7 cut(s) 22, 379, 421, 833, 888, 1204, 1319
FaqI GGGAC 2 cut(s) 223, 1344
FatI CATG 7 cut(s) 18, 375, 417, 829, 884, 1200, 1315
FauNDI CATATG 1 cut(s) 622
Fnu4HI GCNGC 9 cut(s) 7, 49, 243, 546, 570, 573, 882, 915, 1065
FokI GGATG 5 cut(s) 250, 269, 905, 1372, 1434
Fsp4HI GCNGC 9 cut(s) 7, 49, 243, 546, 570, 573, 882, 915, 1065
GlaI GCGC 2 cut(s) 47, 1499
GluI GCNGC 9 cut(s) 7, 49, 243, 546, 570, 573, 882, 915, 1065
HaeIII GGCC 2 cut(s) 51, 416
HapII CCGG 3 cut(s) 232, 350, 1010
HgaI GACGC 2 cut(s) 388, 778
HhaI GCGC 2 cut(s) 48, 1500
Hin1I GRCGYC 1 cut(s) 770
Hin1II CATG 7 cut(s) 22, 379, 421, 833, 888, 1204, 1319
Hin6I GCGC 2 cut(s) 46, 1498
HinP1I GCGC 2 cut(s) 46, 1498
HincII GTYRAC 2 cut(s) 672, 747
HindII GTYRAC 2 cut(s) 672, 747
HinfI GANTC 8 cut(s) 385, 407, 717, 748, 872, 989, 1155, 1367
HpaII CCGG 3 cut(s) 232, 350, 1010
HphI GGTGA 4 cut(s) 28, 491, 695, 1277
Hpy166II GTNNAC 3 cut(s) 672, 747, 1083
Hpy188I TCNGA 5 cut(s) 223, 642, 1060, 1242, 1366
Hpy188III TCNNGA 8 cut(s) 294, 376, 531, 632, 740, 809, 942, 1355
Hpy8I GTNNAC 3 cut(s) 672, 747, 1083
HpyAV CCTTC 7 cut(s) 470, 575, 827, 1101, 1129, 1256, 1330
HpyCH4III ACNGT 5 cut(s) 61, 166, 217, 949, 1022
HpyCH4IV ACGT 1 cut(s) 1427
HpyF10VI GCNNNNNNNGC 9 cut(s) 15, 114, 422, 569, 623, 826, 1052, 1061, 1073
HpyF3I CTNAG 9 cut(s) 66, 176, 549, 641, 741, 859, 1221, 1239, 1343
HpySE526I ACGT 1 cut(s) 1427
Hsp92I GRCGYC 1 cut(s) 770
Hsp92II CATG 7 cut(s) 22, 379, 421, 833, 888, 1204, 1319
HspAI GCGC 2 cut(s) 46, 1498
KroI GCCGGC 1 cut(s) 1009
KroNI GCCGGC 1 cut(s) 1011
Kzo9I GATC 5 cut(s) 372, 438, 1132, 1231, 1294
LmnI GCTCC 5 cut(s) 92, 352, 602, 622, 646
Lsp1109I GCAGC 6 cut(s) 18, 229, 556, 557, 559, 868
MaeII ACGT 1 cut(s) 1427
MaeIII GTNAC 2 cut(s) 61, 301
MalI GATC 5 cut(s) 374, 440, 1134, 1233, 1296
MboI GATC 5 cut(s) 372, 438, 1132, 1231, 1294
MboII GAAGA 5 cut(s) 181, 445, 842, 1142, 1265
MfeI CAATTG 2 cut(s) 360, 1391
MhlI GDGCHC 1 cut(s) 1377
MlsI TGGCCA 1 cut(s) 416
MluNI TGGCCA 1 cut(s) 416
MlyI GAGTC 4 cut(s) 401, 726, 742, 1149
MmeI TCCRAC 1 cut(s) 477
Mox20I TGGCCA 1 cut(s) 416
Mph1103I ATGCAT 2 cut(s) 286, 831
MroNI GCCGGC 1 cut(s) 1009
MscI TGGCCA 1 cut(s) 416
MseI TTAA 4 cut(s) 399, 710, 951, 1466
MslI CAYNNNNRTG 1 cut(s) 971
Msp20I TGGCCA 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 548
MspI CCGG 3 cut(s) 232, 350, 1010
MspR9I CCNGG 1 cut(s) 443
MunI CAATTG 2 cut(s) 360, 1391
MvaI CCWGG 1 cut(s) 443
MvnI CGCG 3 cut(s) 48, 382, 914
MwoI GCNNNNNNNGC 9 cut(s) 15, 114, 422, 569, 623, 826, 1052, 1061, 1073
NaeI GCCGGC 1 cut(s) 1011
NcoI CCATGG 1 cut(s) 417
NdeI CATATG 1 cut(s) 622
NdeII GATC 5 cut(s) 372, 438, 1132, 1231, 1294
NgoMIV GCCGGC 1 cut(s) 1009
NlaIII CATG 7 cut(s) 22, 379, 421, 833, 888, 1204, 1319
NmeAIII GCCGAG 1 cut(s) 226
NmuCI GTSAC 2 cut(s) 61, 301
NsiI ATGCAT 2 cut(s) 286, 831
NspI RCATGY 1 cut(s) 888
PaeR7I CTCGAG 1 cut(s) 1320
PagI TCATGA 1 cut(s) 375
PaqCI CACCTGC 1 cut(s) 1442
PcsI WCGNNNNNNNCGW 2 cut(s) 1141, 1150
PdiI GCCGGC 1 cut(s) 1011
PfeI GAWTC 4 cut(s) 385, 872, 989, 1367
PflMI CCANNNNNTGG 1 cut(s) 1417
PkrI GCNGC 9 cut(s) 8, 50, 244, 547, 571, 574, 883, 916, 1066
Ple19I CGATCG 1 cut(s) 1234
PleI GAGTC 4 cut(s) 401, 725, 742, 1149
PpsI GAGTC 4 cut(s) 401, 725, 742, 1149
PpuMI RGGWCCY 1 cut(s) 1339
Psp5II RGGWCCY 1 cut(s) 1339
Psp6I CCWGG 1 cut(s) 441
PspGI CCWGG 1 cut(s) 441
PspPI GGNCC 4 cut(s) 27, 50, 210, 1339
PspPPI RGGWCCY 1 cut(s) 1339
PspXI VCTCGAGB 1 cut(s) 1320
PstI CTGCAG 2 cut(s) 577, 903
PvuI CGATCG 1 cut(s) 1234
PvuII CAGCTG 1 cut(s) 548
RsaI GTAC 1 cut(s) 1490
RsaNI GTAC 1 cut(s) 1489
RseI CAYNNNNRTG 1 cut(s) 971
SaqAI TTAA 4 cut(s) 399, 710, 951, 1466
SatI GCNGC 9 cut(s) 7, 49, 243, 546, 570, 573, 882, 915, 1065
Sau3AI GATC 5 cut(s) 372, 438, 1132, 1231, 1294
Sau96I GGNCC 4 cut(s) 27, 50, 210, 1339
SchI GAGTC 4 cut(s) 401, 726, 742, 1149
ScrFI CCNGG 1 cut(s) 443
SduI GDGCHC 1 cut(s) 1377
SfcI CTRYAG 3 cut(s) 428, 573, 899
Sfr274I CTCGAG 1 cut(s) 1320
SinI GGWCC 3 cut(s) 27, 210, 1339
SlaI CTCGAG 1 cut(s) 1320
SmiMI CAYNNNNRTG 1 cut(s) 971
SmlI CTYRAG 1 cut(s) 1320
SmoI CTYRAG 1 cut(s) 1320
SsiI CCGC 4 cut(s) 48, 382, 914, 1064
StyD4I CCNGG 1 cut(s) 441
StyI CCWWGG 1 cut(s) 417
TaaI ACNGT 5 cut(s) 61, 166, 217, 949, 1022
TaiI ACGT 1 cut(s) 1430
TaqI TCGA 5 cut(s) 185, 1135, 1144, 1153, 1321
TaqII GACCGA 1 cut(s) 287
TauI GCSGC 3 cut(s) 51, 917, 1067
TfiI GAWTC 4 cut(s) 385, 872, 989, 1367
Tru1I TTAA 4 cut(s) 399, 710, 951, 1466
Tru9I TTAA 4 cut(s) 399, 710, 951, 1466
TscAI CASTG 6 cut(s) 171, 220, 602, 822, 1332, 1444
TseFI GTSAC 2 cut(s) 61, 301
TseI GCWGC 6 cut(s) 6, 242, 545, 569, 572, 881
Tsp45I GTSAC 2 cut(s) 61, 301
TspDTI ATGAA 5 cut(s) 846, 885, 1101, 1266, 1275
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 6 cut(s) 171, 220, 602, 822, 1332, 1444
Van91I CCANNNNNTGG 1 cut(s) 1417
VpaK11BI GGWCC 3 cut(s) 27, 210, 1339
XapI RAATTY 5 cut(s) 449, 694, 1108, 1174, 1443
XceI RCATGY 1 cut(s) 888
XhoI CTCGAG 1 cut(s) 1320
Zsp2I ATGCAT 2 cut(s) 286, 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.