Prupe.2G034500_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
3715595 .. 3722386
6792 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G034500.2

Sequence Viewer

Length: 4110 bp
ATGGAGGAGCAGGAGGATACAGTGTCGTTCTCCGACCACAAGCGCTGCGGTTTCCTCTGTGCCGTTCTCACTGTTACTTCCCCGGACCACCCTGATCTCCGCCAAATCTTACCTTTCGGCACCCGCTTCCAATTCTCTCCAACCGGCGTGAGTTTCACGTCACGAAACGACGTCGTCCTATCTCCCATAGACGAAAACCCCAACGCCGATGATTCGACGAATAATGATTCGGAGCAATGCGAGGCTTCCTCTTCTTCGGAGTTGGGGAAGAAGAGGAAGGCCCCGGAGGTCTCGAAGAAGATAGGAATGCGGAAGAGGAGTATAGGGCTGGTGAATGGGAGCATAAGCGTGGTGCACCAGCTTCACTCTTTGGTTATGAACAAGTGCTTGATGATCGATGCTCGATTGGTTCGGGTTGAGGCCGGTGCCAATGGAGAAGTCAGGGCTGTTTTGCTGGTTGATGTCTATCTCACAATTGCATTATTGTCTGGTTGGCAGTTCCCGAGGTCCGGCTCCGTTGCCGGTGCTCTGTTCCGACATTTGAGTTCTGATTGGGCAGAGAGAAGCGCAATGCTCATGAATGGAGACTATCTCGAAAATACTGTAGGAACAAATAGAAGCATATGGAATCTTTCAGATTGCCATGTTTTTGGTTGCAAGCTGCATCATAATTTCTCTGATTCTTCGAAGAAAAGGCTATTTGAGCTTCATGAAATTTTTAAGAGCTTACCTAGTGTTGCAACGACAGGCAAACCTAATTCTTCTAGAATACAGTCATGTGATGACTCTTGTAGATCGGGTATTTCGGAGATATCTGATGACATTTTACTTGGTATTCTTGCTGTGCTTAGCCCAATTGACCTTGTTAGGGTGTCTGCAACCTGCCGCCATCTGAGACTGCTGGCTACCTCAATCATGCCATGCATGAAACTTAAACTGTTTCCTCATCAGCAAGCAGCAGTTGAGTGGATGCTACAACGTGAGAGAAATGCTGACGTCTTGCCACATCCGTTGTACATGGCTTTCTCAACTGAAGATGGATTTTCTTTCTACATAAACACCATATCTGGGGAAATAATCACTGGGGTGGCTCCCACTGTCAATGATTTTCACGGGGGAATGTTCTGTGATGAGCCTGGATTAGGCAAGACTATAACTGCTCTTTCCCTTATTCTGAAGACACAAGGAACACTGTCAAATCCACCAGATGGGGTACATGTTAACTGGTGTATGCATAATGGAGACCAGAGATGTGGTTATTATGAGCTTAATGGGGTTCATGCCACTGATAGGAACATGCTCTCGGAAAAGAGGGACATGGGTCAGAATGCTCAAACTATTCTTGCCTATTCCAAATACTACCGATCTAAAAGAGCTAGGGTACTTCTTGATGAGCAAATTCCAGGATTCAATAATTCATGTCCTGGACCTTCTGGTAAAGGAATAGAAACAGCAGCAGGTGCATACTCTGATCCAGCAATGTGTGTAGTTCAATGCACCAGAAACTTGAGTCGCATCAGTAAAAATCTTTTTCCCGCATTTGAAGTAGCATCTAGCAAATCCAGAAAAAGAAAAGCGGGGAAAAACTCTAGTAGAATGAAGCATGTTTCTGATGGTCCAGGACGTGTCACTCAGAAAAAGCGAGCTGCTATGCCACATGGACTTTCAAACAGTCACAAGAGGCTTGGGAAGGTTAATGGAGATAATTATGATTATAACGACACCTGGGTTCAGTGTGATGCTTGCTGCAAGTGGCGGAAGCTTCCAGAAAGTAGTAGTTCTGATGCTAGTGCAGCATGGTTTTGTAGCATGAATGCCGATCCTTTCTACCAGAGTTGTAGTGTTCCTGAAGAATCCTGGGATAATTGCCGGCCAATAACATATTTACTGGGATTTTGCACAAAGGAGACATCTGGAGGAGAGGAACAAAACGTTTCTTTCTTCATCAGTGTACTTAAAGAGCATTATGCCTTGATAAACTCCATAACAAAGAAATCCCTAAATTGGTTGGCTAAACTTCCTTCTGACAAGCTCTCAGCAATGGAGACAATTGGTTTGCGAAGTCCTTTCATAAGCACCTGTGTAACGCCTGGTGAAGATGCCTATGGGTTTCAAAAAATATTTCAAGCATTTGGTCTCAAAAGAAGAGTAGAAAAGGGTGTTAATAGGTGGTATTACCCACGAAATCTTCACAATATGAGTTTCGACATTGCTGCTCTCAGAATCGCTCTTTGTGCACCATTGGATTCACTTAGGCTGTATCTTTCAAGAGCAACCCTAATTGTTGTTCCAACCAACTTAGTTGATCATTGGAAAACCCAAATCCAGAAGCATGTAAGGCCTGGTCAGCTACGGGTTTATTTTTGGAATGACCATAGGAAGCCTTCTGCACACAGTCTAGCTTGGGACTACGATGTTGTCATAACCACATTCAATCGTTTAAGTGCAGAGTGGGGCCCTCGTAAGAAAAGTGCATTGATGCAAGTGCATTGGCTTAGAGTCATGTTAGATGAGGGGCATACCCTTGGCTCAAGTCTTAGCTTGACAAACAAAATGCAGATGGCAGTTTCATTGATGGCTTCAAACCGTTGGATATTGACTGGAACTCCAACTCCTAATACACCCAACAGTCAGCTGTCGCATCTTCAACCATTGCTCAAGTTCCTTCATGAGGAAGCTTATGGGAAGAATCATAAGTCATGGGAAGCTGGGATTCTTAGGCCTTTTGAAGCAAAAATGGAAGAAGGACGATCTCGTTTGTTGCATTTACTGCATAGGTGCATGATTAGTGCAAGAAAGGTAGATTTGCAGACTATTCCACCCTGCATCAAGAAAGTTACTTTTCTTGATTTTACAGAGGAGCATGCAAGAAGTTACAACGAATTGGTAGTTACAGTGCGGCGCAATATATTAATGGCTGACTGGAATGATCCTTCTCATGTTGAGAGTCTTTTGAATCCAAAACAGTGGAAATTTCGAAGTACAACTATTGGAAATGTCAGACTATCTTGCTGTGTGGCTGGGCATATAAAAGTAACAGATGCTGGTGAAGATATTCAAGAAACTATGGATATTCTAGCTGAAGATGGTCTAGATCCCACGTCTGAGGAGTATGCTTTTATAAAATATAATCTCCTTTATGGTGGCAACTGTATAAGATGCAAGGAATGGTGTCGGTTACCTGTCATTACACCTTGTAGGCATCTTTTGTGCCTTGATTGTGTTGGTTTGGACAGTGAAAGGTGTACATATCCTGGCTGTGGTCACTTATATGAGATGGAAACTCCGGATGCACTAACTCGGCCAGAAAATCCCAATCCTAAGTGGCCTGTTCCCAAAGATCTTATTGAGTTACAACCCTCATATAAACAGGATAACTGGGATCCTGATTGGCAGTCAACATCTAGCAGTAAAGTCGCCTATGTTGTACAGAAATTGAAAGCACTGCAGGAAGCTAATAGCAATGTTGATTGCCCTCTGGATGACAACAATAATGCCATGCGCACTGACAATTTAGTTTGTCTGTCTGAGATGAGCAATTCAAAAGGACTGAGGCAAGTTCATGACTTTAAAAGGACCACCAAGACTCATGAAACAAATTTGGAAAAAGTTTTGGTATTTTCTCAATTTCTTGAGCATATACATGTTATTGAACAACAGTTGACCATTGCTGGTATTAAATATGCTGGGATGTATAGTCCAATGCATTCTAGCAACAAGATGAAGTCACTGGCGATGTTCCAGCATGATGCTAGTTGCACAGTTCTTTTGATGGATGGAAGTGCTGCACTGGGTCTCGATCTGAGCTTTGTAACACATGTATTTTTAATGGAACCAATATGGGACAGAAGCATGGAGGAACAAGTTGTTAGTCGTGCTCATCGGATGGGTGCTACTCGTCCAATACACGTGGAAACTCTTGCAATGCGCGGTACAATTGAAGAGCAAATGCTGGAGTTCTTACAGGATGCTGATGAGTGCAGAAGATTTTTAAAGGAGGAGGTTGGAAAATCTGACCCTAAAGGGGCACGAACTCGCCGTTCATTACATGATTTTGCTGAGAGCAATTATCTGTCTCAAATTAGCTTTGTGCGGACAAATCCTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1370

Amino Acids

154.08

Weight (kDa)

8.14

Isoelectric Point (pI)

49.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1716, 3122
AarI CACCTGC 1 cut(s) 1448
AatII GACGTC 2 cut(s) 174, 999
Acc16I TGCGCA 1 cut(s) 3503
Acc36I ACCTGC 2 cut(s) 890, 1448
AccB1I GGYRCC 2 cut(s) 119, 425
AccB7I CCANNNNNTGG 1 cut(s) 1208
AccII CGCG 1 cut(s) 3930
AccIII TCCGGA 1 cut(s) 3286
AclI AACGTT 1 cut(s) 1932
AclWI GGATC 6 cut(s) 1466, 1814, 2924, 3089, 3377, 3390
AcoI YGGCCR 2 cut(s) 1871, 3302
AcsI RAATTY 4 cut(s) 714, 1398, 2972, 3598
AcuI CTGAAG 4 cut(s) 1053, 1196, 1869, 3102
AcvI CACGTG 1 cut(s) 3910
AcyI GRCGYC 2 cut(s) 171, 996
AfaI GTAC 8 cut(s) 1016, 1215, 1383, 1953, 2983, 3247, 3429, 3934
AfeI AGCGCT 1 cut(s) 44
AflIII ACRYGT 5 cut(s) 1216, 1624, 3643, 3817, 3907
AjiI CACGTC 3 cut(s) 159, 1625, 3102
AjnI CCWGG 9 cut(s) 1135, 1402, 1423, 1618, 1724, 1856, 2089, 2341, 3253
AleI CACNNNNGTG 1 cut(s) 1085
AloI GAACNNNNNNTCC 2 cut(s) 2596, 2628
Alw21I GWGCWC 4 cut(s) 357, 529, 2239, 3880
Alw26I GTCTC 9 cut(s) 295, 579, 889, 1236, 1901, 2039, 2141, 3800, 4080
Alw44I GTGCAC 2 cut(s) 353, 2235
AlwI GGATC 6 cut(s) 1466, 1814, 2924, 3089, 3377, 3390
AlwNI CAGNNNCTG 1 cut(s) 3044
Ama87I CYCGRG 1 cut(s) 502
Aor13HI TCCGGA 1 cut(s) 3286
Aor51HI AGCGCT 1 cut(s) 44
AoxI GGCC 8 cut(s) 279, 420, 1871, 2339, 2455, 2720, 3302, 3326
ApaI GGGCCC 1 cut(s) 2459
ApaLI GTGCAC 2 cut(s) 353, 2235
ApeKI GCWGC 9 cut(s) 45, 661, 956, 1454, 1646, 1746, 1793, 2213, 3785
ApoI RAATTY 4 cut(s) 714, 1398, 2972, 3598
ArsI GACNNNNNNTTYG 2 cut(s) 2038, 2070
AseI ATTAAT 1 cut(s) 2912
Asp700I GAANNNNTTC 1 cut(s) 3054
AspLEI GCGC 5 cut(s) 45, 569, 2904, 3504, 3930
AspS9I GGNCC 8 cut(s) 85, 280, 507, 1427, 1616, 2455, 2456, 3576
AsuC2I CCSGG 2 cut(s) 83, 284
AsuHPI GGTGA 3 cut(s) 343, 2105, 3059
AsuII TTCGAA 2 cut(s) 686, 2977
AvaI CYCGRG 1 cut(s) 502
AvaII GGWCC 5 cut(s) 85, 507, 1427, 1616, 3576
BaeGI GKGCMC 4 cut(s) 357, 2239, 2459, 4030
BamHI GGATCC 1 cut(s) 3382
BanI GGYRCC 2 cut(s) 119, 425
BanII GRGCYC 1 cut(s) 2459
BbrPI CACGTG 1 cut(s) 3910
BbsI GAAGAC 1 cut(s) 1184
Bbv12I GWGCWC 4 cut(s) 357, 529, 2239, 3880
BbvI GCAGC 9 cut(s) 32, 648, 968, 1466, 1633, 1733, 1805, 2200, 3772
BceAI ACGGC 2 cut(s) 47, 4023
BcgI CGANNNNNNTGC 4 cut(s) 2195, 2229, 3397, 3431
BciT130I CCWGG 9 cut(s) 1137, 1404, 1425, 1620, 1726, 1858, 2091, 2343, 3255
BciVI GTATCC 1 cut(s) 10
BclI TGATCA 1 cut(s) 2305
BcnI CCSGG 2 cut(s) 83, 284
BcoDI GTCTC 9 cut(s) 295, 579, 889, 1236, 1901, 2039, 2141, 3800, 4080
BfmI CTRYAG 2 cut(s) 603, 3446
BfoI RGCGCY 1 cut(s) 46
BfuAI ACCTGC 2 cut(s) 890, 1448
BfuI GTATCC 1 cut(s) 10
BglII AGATCT 1 cut(s) 3340
BlpI GCTNAGC 1 cut(s) 848
Bme18I GGWCC 5 cut(s) 85, 507, 1427, 1616, 3576
BmeT110I CYCGRG 1 cut(s) 502
BmgBI CACGTC 3 cut(s) 159, 1625, 3102
BmgT120I GGNCC 8 cut(s) 85, 280, 507, 1427, 1616, 2455, 2456, 3576
BmiI GGNNCC 9 cut(s) 121, 282, 427, 514, 1092, 2456, 2457, 3384, 3834
BmrI ACTGGG 4 cut(s) 1092, 1898, 3388, 3800
BmuI ACTGGG 4 cut(s) 1092, 1898, 3388, 3800
BoxI GACNNNNGTC 1 cut(s) 1320
BpiI GAAGAC 1 cut(s) 1184
BplI GAGNNNNNCTC 4 cut(s) 233, 265, 576, 608
BpmI CTGGAG 2 cut(s) 1935, 3974
Bpu1102I GCTNAGC 1 cut(s) 848
Bpu14I TTCGAA 2 cut(s) 686, 2977
BpuEI CTTGAG 4 cut(s) 1528, 2515, 2642, 3653
BpuMI CCSGG 2 cut(s) 83, 284
Bsa29I ATCGAT 1 cut(s) 396
BsaAI YACGTR 1 cut(s) 3910
BsaBI GATNNNNATC 1 cut(s) 465
BsaHI GRCGYC 2 cut(s) 171, 996
BsaI GGTCTC 4 cut(s) 295, 1236, 2141, 3800
BsaJI CCNNGG 6 cut(s) 81, 282, 503, 1725, 1857, 2524
BsaWI WCCGGW 1 cut(s) 3286
BsaXI ACNNNNNCTCC 4 cut(s) 2590, 2596, 2620, 2626
Bse118I RCCGGY 4 cut(s) 143, 422, 521, 1869
Bse1I ACTGG 8 cut(s) 1087, 1229, 1893, 2605, 2927, 3383, 3735, 3795
Bse3DI GCAATG 9 cut(s) 242, 576, 1485, 2046, 2208, 2651, 3469, 3666, 3930
Bse8I GATNNNNATC 1 cut(s) 465
BseAI TCCGGA 1 cut(s) 3286
BseBI CCWGG 9 cut(s) 1137, 1404, 1425, 1620, 1726, 1858, 2091, 2343, 3255
BseCI ATCGAT 1 cut(s) 396
BseDI CCNNGG 6 cut(s) 81, 282, 503, 1725, 1857, 2524
BseGI GGATG 8 cut(s) 975, 1006, 3295, 3487, 3696, 3781, 3891, 3973
BseJI GATNNNNATC 1 cut(s) 465
BseMI GCAATG 9 cut(s) 242, 576, 1485, 2046, 2208, 2651, 3469, 3666, 3930
BseMII CTCAG 9 cut(s) 884, 1646, 2049, 2233, 3096, 3519, 3542, 3794, 4050
BseNI ACTGG 8 cut(s) 1087, 1229, 1893, 2605, 2927, 3383, 3735, 3795
BseRI GAGGAG 6 cut(s) 20, 331, 1932, 2873, 3122, 4013
BseSI GKGCMC 4 cut(s) 357, 2239, 2459, 4030
BseXI GCAGC 9 cut(s) 32, 648, 968, 1466, 1633, 1733, 1805, 2200, 3772
BseYI CCCAGC 3 cut(s) 2708, 3020, 3686
BsgI GTGCAG 5 cut(s) 1812, 2373, 2466, 3771, 4000
Bsh1236I CGCG 1 cut(s) 3930
BshFI GGCC 8 cut(s) 281, 422, 1873, 2341, 2457, 2722, 3304, 3328
BshNI GGYRCC 2 cut(s) 119, 425
BshVI ATCGAT 1 cut(s) 396
BsiHKAI GWGCWC 4 cut(s) 357, 529, 2239, 3880
BsiHKCI CYCGRG 1 cut(s) 502
BsiSI CCGG 8 cut(s) 83, 144, 284, 423, 510, 522, 1870, 3287
BslFI GGGAC 3 cut(s) 1328, 2420, 3857
BsmAI GTCTC 9 cut(s) 295, 579, 889, 1236, 1901, 2039, 2141, 3800, 4080
BsmFI GGGAC 3 cut(s) 1328, 2420, 3857
BsmI GAATGC 4 cut(s) 312, 1333, 1819, 3706
BsnI GGCC 8 cut(s) 281, 422, 1873, 2341, 2457, 2722, 3304, 3328
Bso31I GGTCTC 4 cut(s) 295, 1236, 2141, 3800
BsoBI CYCGRG 1 cut(s) 502
Bsp119I TTCGAA 2 cut(s) 686, 2977
Bsp120I GGGCCC 1 cut(s) 2455
Bsp1286I GDGCHC 6 cut(s) 357, 529, 2239, 2459, 3880, 4030
Bsp13I TCCGGA 1 cut(s) 3286
Bsp1407I TGTACA 3 cut(s) 1014, 3245, 3427
Bsp1720I GCTNAGC 1 cut(s) 848
BspANI GGCC 8 cut(s) 281, 422, 1873, 2341, 2457, 2722, 3304, 3328
BspCNI CTCAG 9 cut(s) 885, 1645, 2048, 2232, 3097, 3520, 3543, 3795, 4051
BspDI ATCGAT 1 cut(s) 396
BspEI TCCGGA 1 cut(s) 3286
BspFNI CGCG 1 cut(s) 3930
BspHI TCATGA 5 cut(s) 576, 709, 2668, 3562, 3589
BspLI GGNNCC 9 cut(s) 121, 282, 427, 514, 1092, 2456, 2457, 3384, 3834
BspMAI CTGCAG 1 cut(s) 3450
BspMI ACCTGC 2 cut(s) 890, 1448
BspPI GGATC 6 cut(s) 1466, 1814, 2924, 3089, 3377, 3390
BspQI GCTCTTC 1 cut(s) 3936
BspT104I TTCGAA 2 cut(s) 686, 2977
BspT107I GGYRCC 2 cut(s) 119, 425
BspTNI GGTCTC 4 cut(s) 295, 1236, 2141, 3800
BsrDI GCAATG 9 cut(s) 242, 576, 1485, 2046, 2208, 2651, 3469, 3666, 3930
BsrFI RCCGGY 4 cut(s) 143, 422, 521, 1869
BsrGI TGTACA 3 cut(s) 1014, 3245, 3427
BsrI ACTGG 8 cut(s) 1087, 1229, 1893, 2605, 2927, 3383, 3735, 3795
BssAI RCCGGY 4 cut(s) 143, 422, 521, 1869
BssECI CCNNGG 6 cut(s) 81, 282, 503, 1725, 1857, 2524
BssNI GRCGYC 2 cut(s) 171, 996
BssT1I CCWWGG 1 cut(s) 2524
Bst2UI CCWGG 9 cut(s) 1137, 1404, 1425, 1620, 1726, 1858, 2091, 2343, 3255
Bst6I CTCTTC 5 cut(s) 256, 266, 308, 2140, 3936
BstACI GRCGYC 2 cut(s) 171, 996
BstAPI GCANNNNNTGC 2 cut(s) 1460, 2770
BstAUI TGTACA 3 cut(s) 1014, 3245, 3427
BstBAI YACGTR 1 cut(s) 3910
BstBI TTCGAA 2 cut(s) 686, 2977
BstC8I GCNNGC 7 cut(s) 659, 903, 954, 1644, 1744, 1871, 2865
BstEII GGTNACC 1 cut(s) 3177
BstENI CCTNNNNNAGG 2 cut(s) 1140, 2669
BstF5I GGATG 8 cut(s) 975, 1006, 3295, 3487, 3696, 3781, 3891, 3973
BstFNI CGCG 1 cut(s) 3930
BstH2I RGCGCY 1 cut(s) 46
BstHHI GCGC 5 cut(s) 45, 569, 2904, 3504, 3930
BstMAI GTCTC 9 cut(s) 295, 579, 889, 1236, 1901, 2039, 2141, 3800, 4080
BstMWI GCNNNNNNNGC 7 cut(s) 703, 1460, 1793, 2234, 2338, 2347, 2770
BstNI CCWGG 9 cut(s) 1137, 1404, 1425, 1620, 1726, 1858, 2091, 2343, 3255
BstNSI RCATGY 7 cut(s) 1220, 1300, 1607, 2336, 2867, 3647, 3821
BstPAI GACNNNNGTC 1 cut(s) 1320
BstPI GGTNACC 1 cut(s) 3177
BstSFI CTRYAG 2 cut(s) 603, 3446
BstSLI GKGCMC 4 cut(s) 357, 2239, 2459, 4030
BstUI CGCG 1 cut(s) 3930
BstV1I GCAGC 9 cut(s) 32, 648, 968, 1466, 1633, 1733, 1805, 2200, 3772
BstV2I GAAGAC 1 cut(s) 1184
BstX2I RGATCY 3 cut(s) 3094, 3340, 3382
BstXI CCANNNNNNTGG 3 cut(s) 650, 1253, 2967
BstYI RGATCY 3 cut(s) 3094, 3340, 3382
Bsu15I ATCGAT 1 cut(s) 396
BsuI GTATCC 1 cut(s) 10
BsuRI GGCC 8 cut(s) 281, 422, 1873, 2341, 2457, 2722, 3304, 3328
BsuTUI ATCGAT 1 cut(s) 396
BtgZI GCGATG 1 cut(s) 3749
BtrI CACGTC 3 cut(s) 159, 1625, 3102
BtsCI GGATG 8 cut(s) 975, 1006, 3295, 3487, 3696, 3781, 3891, 3973
BtsI GCAGTG 1 cut(s) 3443
BveI ACCTGC 2 cut(s) 890, 1448
Cac8I GCNNGC 7 cut(s) 659, 903, 954, 1644, 1744, 1871, 2865
CaiI CAGNNNCTG 1 cut(s) 3044
CciI TCATGA 5 cut(s) 576, 709, 2668, 3562, 3589
CfoI GCGC 5 cut(s) 45, 569, 2904, 3504, 3930
Cfr10I RCCGGY 4 cut(s) 143, 422, 521, 1869
Cfr13I GGNCC 8 cut(s) 85, 280, 507, 1427, 1616, 2455, 2456, 3576
ClaI ATCGAT 1 cut(s) 396
Csp6I GTAC 8 cut(s) 1015, 1214, 1382, 1952, 2982, 3246, 3428, 3933
CspCI CAANNNNNGTGG 4 cut(s) 993, 1028, 3891, 3926
CviQI GTAC 8 cut(s) 1015, 1214, 1382, 1952, 2982, 3246, 3428, 3933
DraI TTTAAA 2 cut(s) 3571, 3993
EaeI YGGCCR 2 cut(s) 1871, 3302
Eam1104I CTCTTC 5 cut(s) 256, 266, 308, 2140, 3936
EarI CTCTTC 5 cut(s) 256, 266, 308, 2140, 3936
EciI GGCGGA 2 cut(s) 89, 1771
Eco130I CCWWGG 1 cut(s) 2524
Eco147I AGGCCT 2 cut(s) 2341, 2722
Eco24I GRGCYC 1 cut(s) 2459
Eco31I GGTCTC 4 cut(s) 295, 1236, 2141, 3800
Eco32I GATATC 1 cut(s) 813
Eco47I GGWCC 5 cut(s) 85, 507, 1427, 1616, 3576
Eco47III AGCGCT 1 cut(s) 44
Eco57I CTGAAG 4 cut(s) 1053, 1196, 1869, 3102
Eco72I CACGTG 1 cut(s) 3910
Eco88I CYCGRG 1 cut(s) 502
Eco91I GGTNACC 1 cut(s) 3177
EcoNI CCTNNNNNAGG 2 cut(s) 1140, 2669
EcoO109I RGGNCCY 3 cut(s) 280, 2455, 2456
EcoO65I GGTNACC 1 cut(s) 3177
EcoRII CCWGG 9 cut(s) 1135, 1402, 1423, 1618, 1724, 1856, 2089, 2341, 3253
EcoRV GATATC 1 cut(s) 813
EcoT14I CCWWGG 1 cut(s) 2524
EcoT22I ATGCAT 3 cut(s) 926, 1236, 3708
EcoT38I GRGCYC 1 cut(s) 2459
ErhI CCWWGG 1 cut(s) 2524
FaqI GGGAC 3 cut(s) 1328, 2420, 3857
FauI CCCGC 3 cut(s) 131, 1543, 1570
FauNDI CATATG 1 cut(s) 623
FbaI TGATCA 1 cut(s) 2305
FokI GGATG 8 cut(s) 982, 993, 3302, 3494, 3703, 3788, 3898, 3980
FriOI GRGCYC 1 cut(s) 2459
FspAI RTGCGCAY 1 cut(s) 3503
FspI TGCGCA 1 cut(s) 3503
GlaI GCGC 5 cut(s) 44, 568, 2903, 3503, 3929
GsaI CCCAGC 3 cut(s) 2712, 3024, 3690
GsuI CTGGAG 2 cut(s) 1935, 3974
HaeII RGCGCY 1 cut(s) 46
HaeIII GGCC 8 cut(s) 281, 422, 1873, 2341, 2457, 2722, 3304, 3328
HapII CCGG 8 cut(s) 83, 144, 284, 423, 510, 522, 1870, 3287
HhaI GCGC 5 cut(s) 45, 569, 2904, 3504, 3930
Hin1I GRCGYC 2 cut(s) 171, 996
Hin6I GCGC 5 cut(s) 43, 567, 2902, 3502, 3928
HinP1I GCGC 5 cut(s) 43, 567, 2902, 3502, 3928
HincII GTYRAC 3 cut(s) 1222, 3399, 3663
HindII GTYRAC 3 cut(s) 1222, 3399, 3663
HindIII AAGCTT 2 cut(s) 1760, 2676
HpaI GTTAAC 1 cut(s) 1222
HpaII CCGG 8 cut(s) 83, 144, 284, 423, 510, 522, 1870, 3287
HphI GGTGA 3 cut(s) 343, 2105, 3059
Hpy166II GTNNAC 7 cut(s) 355, 1222, 1952, 2237, 3246, 3399, 3663
Hpy8I GTNNAC 7 cut(s) 355, 1222, 1952, 2237, 3246, 3399, 3663
Hpy99I CGWCG 3 cut(s) 173, 176, 220
HpyAV CCTTC 8 cut(s) 271, 1440, 1684, 2031, 2394, 2675, 2738, 2943
HpyCH4IV ACGT 8 cut(s) 158, 171, 979, 996, 1624, 1932, 3101, 3909
HpyF10VI GCNNNNNNNGC 7 cut(s) 703, 1460, 1793, 2234, 2338, 2347, 2770
HpySE526I ACGT 8 cut(s) 158, 171, 979, 996, 1624, 1932, 3101, 3909
Hsp92I GRCGYC 2 cut(s) 171, 996
HspAI GCGC 5 cut(s) 43, 567, 2902, 3502, 3928
Kpn2I TCCGGA 1 cut(s) 3286
KroI GCCGGC 1 cut(s) 1869
KroNI GCCGGC 1 cut(s) 1871
Ksp22I TGATCA 1 cut(s) 2305
KspAI GTTAAC 1 cut(s) 1222
LguI GCTCTTC 1 cut(s) 3936
LmnI GCTCC 6 cut(s) 7, 232, 339, 518, 1096, 2860
Lsp1109I GCAGC 9 cut(s) 32, 648, 968, 1466, 1633, 1733, 1805, 2200, 3772
MaeII ACGT 8 cut(s) 158, 171, 979, 996, 1624, 1932, 3101, 3909
MfeI CAATTG 4 cut(s) 474, 855, 2049, 3936
MflI RGATCY 3 cut(s) 3094, 3340, 3382
MhlI GDGCHC 6 cut(s) 357, 529, 2239, 2459, 3880, 4030
MlyI GAGTC 5 cut(s) 779, 1519, 2508, 2956, 3580
MmeI TCCRAC 7 cut(s) 57, 164, 559, 2315, 2570, 2633, 3985
Mph1103I ATGCAT 3 cut(s) 926, 1236, 3708
MroI TCCGGA 1 cut(s) 3286
MroNI GCCGGC 1 cut(s) 1869
MroXI GAANNNNTTC 1 cut(s) 3054
MslI CAYNNNNRTG 4 cut(s) 347, 1085, 3270, 3642
MspA1I CMGCKG 1 cut(s) 2635
MspI CCGG 8 cut(s) 83, 144, 284, 423, 510, 522, 1870, 3287
MunI CAATTG 4 cut(s) 474, 855, 2049, 3936
Mva1269I GAATGC 4 cut(s) 312, 1333, 1819, 3706
MvaI CCWGG 9 cut(s) 1137, 1404, 1425, 1620, 1726, 1858, 2091, 2343, 3255
MvnI CGCG 1 cut(s) 3930
MwoI GCNNNNNNNGC 7 cut(s) 703, 1460, 1793, 2234, 2338, 2347, 2770
NaeI GCCGGC 1 cut(s) 1871
NciI CCSGG 2 cut(s) 83, 284
NdeI CATATG 1 cut(s) 623
NgoMIV GCCGGC 1 cut(s) 1869
NlaIV GGNNCC 9 cut(s) 121, 282, 427, 514, 1092, 2456, 2457, 3384, 3834
NmeAIII GCCGAG 1 cut(s) 3280
NmuCI GTSAC 5 cut(s) 159, 1627, 1673, 3263, 3726
NsbI TGCGCA 1 cut(s) 3503
NsiI ATGCAT 3 cut(s) 926, 1236, 3708
NspI RCATGY 7 cut(s) 1220, 1300, 1607, 2336, 2867, 3647, 3821
NspV TTCGAA 2 cut(s) 686, 2977
OliI CACNNNNGTG 1 cut(s) 1085
PaeI GCATGC 1 cut(s) 2867
PagI TCATGA 5 cut(s) 576, 709, 2668, 3562, 3589
PaqCI CACCTGC 1 cut(s) 1448
PceI AGGCCT 2 cut(s) 2341, 2722
PciI ACATGT 3 cut(s) 1216, 3643, 3817
PciSI GCTCTTC 1 cut(s) 3936
PcsI WCGNNNNNNNCGW 1 cut(s) 4036
PctI GAATGC 4 cut(s) 312, 1333, 1819, 3706
PdiI GCCGGC 1 cut(s) 1871
PdmI GAANNNNTTC 1 cut(s) 3054
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 1 cut(s) 1208
PfoI TCCNGGA 3 cut(s) 1402, 1423, 1618
PleI GAGTC 5 cut(s) 779, 1518, 2507, 2955, 3580
PmaCI CACGTG 1 cut(s) 3910
PmlI CACGTG 1 cut(s) 3910
PpsI GAGTC 5 cut(s) 779, 1518, 2507, 2955, 3580
Ppu21I YACGTR 1 cut(s) 3910
PscI ACATGT 3 cut(s) 1216, 3643, 3817
PshAI GACNNNNGTC 1 cut(s) 1320
PshBI ATTAAT 1 cut(s) 2912
PsiI TTATAA 2 cut(s) 1716, 3122
Psp1406I AACGTT 1 cut(s) 1932
Psp6I CCWGG 9 cut(s) 1135, 1402, 1423, 1618, 1724, 1856, 2089, 2341, 3253
PspCI CACGTG 1 cut(s) 3910
PspEI GGTNACC 1 cut(s) 3177
PspFI CCCAGC 3 cut(s) 2708, 3020, 3686
PspGI CCWGG 9 cut(s) 1135, 1402, 1423, 1618, 1724, 1856, 2089, 2341, 3253
PspN4I GGNNCC 9 cut(s) 121, 282, 427, 514, 1092, 2456, 2457, 3384, 3834
PspOMI GGGCCC 1 cut(s) 2455
PspPI GGNCC 8 cut(s) 85, 280, 507, 1427, 1616, 2455, 2456, 3576
PstI CTGCAG 1 cut(s) 3450
PstNI CAGNNNCTG 1 cut(s) 3044
PsuI RGATCY 3 cut(s) 3094, 3340, 3382
PsyI GACNNNGTC 1 cut(s) 173
PvuII CAGCTG 1 cut(s) 2635
RsaI GTAC 8 cut(s) 1016, 1215, 1383, 1953, 2983, 3247, 3429, 3934
RsaNI GTAC 8 cut(s) 1015, 1214, 1382, 1952, 2982, 3246, 3428, 3933
RseI CAYNNNNRTG 4 cut(s) 347, 1085, 3270, 3642
SapI GCTCTTC 1 cut(s) 3936
Sau96I GGNCC 8 cut(s) 85, 280, 507, 1427, 1616, 2455, 2456, 3576
SchI GAGTC 5 cut(s) 779, 1519, 2508, 2956, 3580
SduI GDGCHC 6 cut(s) 357, 529, 2239, 2459, 3880, 4030
SfcI CTRYAG 2 cut(s) 603, 3446
SfuI TTCGAA 2 cut(s) 686, 2977
SinI GGWCC 5 cut(s) 85, 507, 1427, 1616, 3576
SmiMI CAYNNNNRTG 4 cut(s) 347, 1085, 3270, 3642
SmlI CTYRAG 4 cut(s) 1507, 2530, 2657, 3632
SmoI CTYRAG 4 cut(s) 1507, 2530, 2657, 3632
SphI GCATGC 1 cut(s) 2867
SseBI AGGCCT 2 cut(s) 2341, 2722
SspI AATATT 1 cut(s) 2121
StuI AGGCCT 2 cut(s) 2341, 2722
StyI CCWWGG 1 cut(s) 2524
TaiI ACGT 8 cut(s) 161, 174, 982, 999, 1627, 1935, 3104, 3912
TaqI TCGA 9 cut(s) 215, 293, 396, 403, 594, 686, 2205, 2977, 3798
TatI WGTACW 5 cut(s) 1014, 1951, 2981, 3245, 3427
TauI GCSGC 2 cut(s) 888, 2902
TseFI GTSAC 5 cut(s) 159, 1627, 1673, 3263, 3726
TseI GCWGC 9 cut(s) 45, 661, 956, 1454, 1646, 1746, 1793, 2213, 3785
Tsp45I GTSAC 5 cut(s) 159, 1627, 1673, 3263, 3726
TspGWI ACGGA 2 cut(s) 505, 999
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 1 cut(s) 1208
VneI GTGCAC 2 cut(s) 353, 2235
VpaK11BI GGWCC 5 cut(s) 85, 507, 1427, 1616, 3576
VspI ATTAAT 1 cut(s) 2912
XagI CCTNNNNNAGG 2 cut(s) 1140, 2669
XapI RAATTY 4 cut(s) 714, 1398, 2972, 3598
XbaI TCTAGA 2 cut(s) 764, 3091
XceI RCATGY 7 cut(s) 1220, 1300, 1607, 2336, 2867, 3647, 3821
XmnI GAANNNNTTC 1 cut(s) 3054
ZraI GACGTC 2 cut(s) 172, 997
Zsp2I ATGCAT 3 cut(s) 926, 1236, 3708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.