f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54460 AT3G54460 |
| fragaria_vesca | FvH4_7g02950 FvH4_7g02950 FvH4_7g02950 |
| malus_domestica | MD02G1288500.v1.1 MD07G1038300.v1.1 |
| prunus_persica | Prupe.2G034500_v2.0.a1 Prupe.2G034500_v2.0.a1 |
| pyrus_communis | pycom07g02660 |
| rosa_chinensis | RchiOBHm_Chr1g0323901 |
| rosa_laevigata | RLG00000030243 RLG00000031960 |
| rosa_multiflora | Rmu_sc0001449.1_g000002 Rmu_sc0012343.1_g000008 |
| rosa_roxburghii | Rroxscaffold_4G00326120 |
| rosa_rugosa | Rorug01G0040500.1 |
| rosa_samantha | Rh1CG059700 Rh1CG060300 Rh1DG063700 Rh1DG064300 |
| rosa_wichuraiana | Rw0G011390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2688 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 161, 164 |
| AatII | GACGTC | 2 cut(s) | 23, 135 |
| Acc36I | ACCTGC | 1 cut(s) | 880 |
| AccB1I | GGYRCC | 1 cut(s) | 178 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 719 |
| AccI | GTMKAC | 1 cut(s) | 2902 |
| AccII | CGCG | 4 cut(s) | 112, 120, 448, 1607 |
| AccIII | TCCGGA | 1 cut(s) | 3196 |
| AciI | CCGC | 8 cut(s) | 45, 83, 118, 354, 448, 1570, 2068, 2497 |
| AclI | AACGTT | 2 cut(s) | 2240, 3847 |
| AclWI | GGATC | 4 cut(s) | 2735, 3159, 3188, 3201 |
| AcoI | YGGCCR | 2 cut(s) | 2829, 3113 |
| AcsI | RAATTY | 8 cut(s) | 651, 1335, 1627, 1792, 2107, 2783, 3359, 3409 |
| AcuI | CTGAAG | 3 cut(s) | 990, 1133, 1683 |
| AcvI | CACGTG | 1 cut(s) | 3721 |
| AcyI | GRCGYC | 4 cut(s) | 20, 132, 159, 360 |
| AfaI | GTAC | 7 cut(s) | 1152, 1168, 2721, 2794, 3058, 3717, 3900 |
| AflII | CTTAAG | 2 cut(s) | 1435, 1769 |
| AflIII | ACRYGT | 1 cut(s) | 3718 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1866 |
| AjnI | CCWGG | 6 cut(s) | 1072, 1313, 1339, 1538, 2152, 3064 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2407, 2439 |
| Alw21I | GWGCWC | 4 cut(s) | 288, 466, 2287, 3691 |
| Alw26I | GTCTC | 7 cut(s) | 674, 850, 1173, 1853, 1952, 2696, 3232 |
| Alw44I | GTGCAC | 2 cut(s) | 284, 2283 |
| AlwI | GGATC | 4 cut(s) | 2735, 3159, 3188, 3201 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1388, 2855 |
| Ama87I | CYCGRG | 1 cut(s) | 1516 |
| Aor13HI | TCCGGA | 1 cut(s) | 3196 |
| AoxI | GGCC | 7 cut(s) | 351, 2150, 2266, 2531, 2829, 3113, 3137 |
| ApaI | GGGCCC | 1 cut(s) | 2270 |
| ApaLI | GTGCAC | 2 cut(s) | 284, 2283 |
| ApeKI | GCWGC | 9 cut(s) | 122, 388, 1385, 1388, 2024, 2161, 3466, 3567, 3596 |
| ApoI | RAATTY | 8 cut(s) | 651, 1335, 1627, 1792, 2107, 2783, 3359, 3409 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 86, 118, 434, 466 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1932, 2865 |
| AspLEI | GCGC | 5 cut(s) | 114, 122, 1607, 1609, 2715 |
| AspS9I | GGNCC | 4 cut(s) | 85, 796, 2266, 2267 |
| AsuC2I | CCSGG | 3 cut(s) | 80, 1362, 2833 |
| AsuHPI | GGTGA | 6 cut(s) | 274, 316, 1223, 1339, 1919, 3359 |
| AsuII | TTCGAA | 1 cut(s) | 2788 |
| AsuNHI | GCTAGC | 2 cut(s) | 1601, 3563 |
| AvaI | CYCGRG | 1 cut(s) | 1516 |
| AvaII | GGWCC | 2 cut(s) | 85, 796 |
| BaeGI | GKGCMC | 4 cut(s) | 288, 2270, 2287, 3838 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 301, 334 |
| BamHI | GGATCC | 1 cut(s) | 3193 |
| BanI | GGYRCC | 1 cut(s) | 178 |
| BanII | GRGCYC | 1 cut(s) | 2270 |
| BbrPI | CACGTG | 1 cut(s) | 3721 |
| BbsI | GAAGAC | 3 cut(s) | 236, 1121, 2753 |
| Bbv12I | GWGCWC | 4 cut(s) | 288, 466, 2287, 3691 |
| BbvCI | CCTCAGC | 1 cut(s) | 2667 |
| BbvI | GCAGC | 9 cut(s) | 134, 375, 1375, 1397, 2011, 2148, 3478, 3554, 3583 |
| BceAI | ACGGC | 5 cut(s) | 44, 53, 146, 1545, 2989 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 37 |
| BciT130I | CCWGG | 6 cut(s) | 1074, 1315, 1341, 1540, 2154, 3066 |
| BclI | TGATCA | 1 cut(s) | 2116 |
| BcnI | CCSGG | 3 cut(s) | 80, 1362, 2833 |
| BcoDI | GTCTC | 7 cut(s) | 674, 850, 1173, 1853, 1952, 2696, 3232 |
| BfmI | CTRYAG | 1 cut(s) | 1618 |
| BfrI | CTTAAG | 2 cut(s) | 1435, 1769 |
| BfuAI | ACCTGC | 1 cut(s) | 880 |
| BglII | AGATCT | 1 cut(s) | 1453 |
| Bme1390I | CCNGG | 9 cut(s) | 80, 1074, 1315, 1341, 1362, 1540, 2154, 2833, 3066 |
| Bme18I | GGWCC | 2 cut(s) | 85, 796 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1866 |
| BmeT110I | CYCGRG | 1 cut(s) | 1516 |
| BmgT120I | GGNCC | 4 cut(s) | 85, 796, 2266, 2267 |
| BmiI | GGNNCC | 8 cut(s) | 87, 180, 724, 2267, 2268, 2269, 3195, 3645 |
| BmrFI | CCNGG | 9 cut(s) | 80, 1074, 1315, 1341, 1362, 1540, 2154, 2833, 3066 |
| BmrI | ACTGGG | 3 cut(s) | 499, 2131, 3199 |
| BmtI | GCTAGC | 2 cut(s) | 1605, 3567 |
| BmuI | ACTGGG | 3 cut(s) | 499, 2131, 3199 |
| BpiI | GAAGAC | 3 cut(s) | 236, 1121, 2753 |
| BpmI | CTGGAG | 4 cut(s) | 1026, 1125, 1749, 3785 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2667 |
| Bpu14I | TTCGAA | 1 cut(s) | 2788 |
| BpuEI | CTTGAG | 4 cut(s) | 499, 2326, 2453, 3464 |
| BpuMI | CCSGG | 3 cut(s) | 80, 1362, 2833 |
| Bsa29I | ATCGAT | 1 cut(s) | 327 |
| BsaAI | YACGTR | 1 cut(s) | 3721 |
| BsaBI | GATNNNNATC | 2 cut(s) | 402, 1914 |
| BsaHI | GRCGYC | 4 cut(s) | 20, 132, 159, 360 |
| BsaI | GGTCTC | 2 cut(s) | 1173, 1952 |
| BsaJI | CCNNGG | 9 cut(s) | 78, 837, 1539, 1610, 1716, 3064, 3147, 3309, 3829 |
| BsaWI | WCCGGW | 1 cut(s) | 3196 |
| Bse118I | RCCGGY | 3 cut(s) | 175, 356, 458 |
| Bse1I | ACTGG | 7 cut(s) | 494, 713, 1024, 2126, 2738, 3194, 3546 |
| Bse3DI | GCAATG | 5 cut(s) | 212, 513, 2462, 2722, 3477 |
| Bse8I | GATNNNNATC | 2 cut(s) | 402, 1914 |
| BseAI | TCCGGA | 1 cut(s) | 3196 |
| BseBI | CCWGG | 6 cut(s) | 1074, 1315, 1341, 1540, 2154, 3066 |
| BseCI | ATCGAT | 1 cut(s) | 327 |
| BseDI | CCNNGG | 9 cut(s) | 78, 837, 1539, 1610, 1716, 3064, 3147, 3309, 3829 |
| BseGI | GGATG | 8 cut(s) | 912, 943, 2905, 3190, 3394, 3507, 3592, 3702 |
| BseJI | GATNNNNATC | 2 cut(s) | 402, 1914 |
| BseMI | GCAATG | 5 cut(s) | 212, 513, 2462, 2722, 3477 |
| BseMII | CTCAG | 5 cut(s) | 391, 1674, 2073, 2658, 3330 |
| BseNI | ACTGG | 7 cut(s) | 494, 713, 1024, 2126, 2738, 3194, 3546 |
| BsePI | GCGCGC | 1 cut(s) | 1605 |
| BseRI | GAGGAG | 4 cut(s) | 181, 262, 1128, 2933 |
| BseSI | GKGCMC | 4 cut(s) | 288, 2270, 2287, 3838 |
| BseXI | GCAGC | 9 cut(s) | 134, 375, 1375, 1397, 2011, 2148, 3478, 3554, 3583 |
| BseYI | CCCAGC | 2 cut(s) | 2519, 3497 |
| BsgI | GTGCAG | 5 cut(s) | 1444, 2184, 2277, 3553, 3811 |
| Bsh1236I | CGCG | 4 cut(s) | 112, 120, 448, 1607 |
| BshFI | GGCC | 7 cut(s) | 353, 2152, 2268, 2533, 2831, 3115, 3139 |
| BshNI | GGYRCC | 1 cut(s) | 178 |
| BshVI | ATCGAT | 1 cut(s) | 327 |
| BsiHKAI | GWGCWC | 4 cut(s) | 288, 466, 2287, 3691 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1516 |
| BsiSI | CCGG | 8 cut(s) | 80, 176, 182, 357, 459, 1362, 2832, 3197 |
| BslFI | GGGAC | 5 cut(s) | 1344, 2084, 2231, 3291, 3668 |
| BsmAI | GTCTC | 7 cut(s) | 674, 850, 1173, 1853, 1952, 2696, 3232 |
| BsmFI | GGGAC | 5 cut(s) | 1344, 2084, 2231, 3291, 3668 |
| BsmI | GAATGC | 2 cut(s) | 3287, 3517 |
| BsnI | GGCC | 7 cut(s) | 353, 2152, 2268, 2533, 2831, 3115, 3139 |
| Bso31I | GGTCTC | 2 cut(s) | 1173, 1952 |
| BsoBI | CYCGRG | 1 cut(s) | 1516 |
| Bsp119I | TTCGAA | 1 cut(s) | 2788 |
| Bsp120I | GGGCCC | 1 cut(s) | 2266 |
| Bsp1286I | GDGCHC | 6 cut(s) | 288, 466, 2270, 2287, 3691, 3838 |
| Bsp13I | TCCGGA | 1 cut(s) | 3196 |
| Bsp1407I | TGTACA | 2 cut(s) | 1166, 3715 |
| Bsp143I | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| Bsp19I | CCATGG | 2 cut(s) | 1610, 3309 |
| BspACI | CCGC | 8 cut(s) | 45, 83, 118, 354, 448, 1570, 2068, 2497 |
| BspANI | GGCC | 7 cut(s) | 353, 2152, 2268, 2533, 2831, 3115, 3139 |
| BspCNI | CTCAG | 5 cut(s) | 390, 1675, 2072, 2659, 3331 |
| BspDI | ATCGAT | 1 cut(s) | 327 |
| BspEI | TCCGGA | 1 cut(s) | 3196 |
| BspFNI | CGCG | 4 cut(s) | 112, 120, 448, 1607 |
| BspHI | TCATGA | 3 cut(s) | 646, 2479, 3400 |
| BspLI | GGNNCC | 8 cut(s) | 87, 180, 724, 2267, 2268, 2269, 3195, 3645 |
| BspMI | ACCTGC | 1 cut(s) | 880 |
| BspOI | GCTAGC | 2 cut(s) | 1605, 3567 |
| BspPI | GGATC | 4 cut(s) | 2735, 3159, 3188, 3201 |
| BspQI | GCTCTTC | 1 cut(s) | 3747 |
| BspT104I | TTCGAA | 1 cut(s) | 2788 |
| BspT107I | GGYRCC | 1 cut(s) | 178 |
| BspTI | CTTAAG | 2 cut(s) | 1435, 1769 |
| BspTNI | GGTCTC | 2 cut(s) | 1173, 1952 |
| BsrDI | GCAATG | 5 cut(s) | 212, 513, 2462, 2722, 3477 |
| BsrFI | RCCGGY | 3 cut(s) | 175, 356, 458 |
| BsrGI | TGTACA | 2 cut(s) | 1166, 3715 |
| BsrI | ACTGG | 7 cut(s) | 494, 713, 1024, 2126, 2738, 3194, 3546 |
| BssAI | RCCGGY | 3 cut(s) | 175, 356, 458 |
| BssECI | CCNNGG | 9 cut(s) | 78, 837, 1539, 1610, 1716, 3064, 3147, 3309, 3829 |
| BssHII | GCGCGC | 1 cut(s) | 1605 |
| BssMI | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| BssNI | GRCGYC | 4 cut(s) | 20, 132, 159, 360 |
| BssT1I | CCWWGG | 6 cut(s) | 837, 1610, 1716, 3147, 3309, 3829 |
| Bst2UI | CCWGG | 6 cut(s) | 1074, 1315, 1341, 1540, 2154, 3066 |
| Bst4CI | ACNGT | 9 cut(s) | 578, 1864, 2207, 2399, 2707, 2963, 3032, 3047, 3574 |
| Bst6I | CTCTTC | 3 cut(s) | 239, 3747, 3804 |
| BstACI | GRCGYC | 4 cut(s) | 20, 132, 159, 360 |
| BstAFI | CTTAAG | 2 cut(s) | 1435, 1769 |
| BstAUI | TGTACA | 2 cut(s) | 1166, 3715 |
| BstBAI | YACGTR | 1 cut(s) | 3721 |
| BstBI | TTCGAA | 1 cut(s) | 2788 |
| BstC8I | GCNNGC | 7 cut(s) | 358, 513, 1603, 1607, 2857, 3011, 3565 |
| BstDSI | CCRYGG | 2 cut(s) | 1610, 3309 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1077, 2480 |
| BstF5I | GGATG | 8 cut(s) | 912, 943, 2905, 3190, 3394, 3507, 3592, 3702 |
| BstFNI | CGCG | 4 cut(s) | 112, 120, 448, 1607 |
| BstHHI | GCGC | 5 cut(s) | 114, 122, 1607, 1609, 2715 |
| BstKTI | GATC | 8 cut(s) | 327, 1304, 1456, 2119, 2564, 2743, 3154, 3196 |
| BstMAI | GTCTC | 7 cut(s) | 674, 850, 1173, 1853, 1952, 2696, 3232 |
| BstMBI | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 65, 512, 640, 1431, 1440, 1693, 2149, 2158, 3010 |
| BstNI | CCWGG | 6 cut(s) | 1074, 1315, 1341, 1540, 2154, 3066 |
| BstNSI | RCATGY | 3 cut(s) | 2147, 2678, 3632 |
| BstSCI | CCNGG | 9 cut(s) | 78, 1072, 1313, 1339, 1360, 1538, 2152, 2831, 3064 |
| BstSFI | CTRYAG | 1 cut(s) | 1618 |
| BstSLI | GKGCMC | 4 cut(s) | 288, 2270, 2287, 3838 |
| BstUI | CGCG | 4 cut(s) | 112, 120, 448, 1607 |
| BstV1I | GCAGC | 9 cut(s) | 134, 375, 1375, 1397, 2011, 2148, 3478, 3554, 3583 |
| BstV2I | GAAGAC | 3 cut(s) | 236, 1121, 2753 |
| BstX2I | RGATCY | 3 cut(s) | 1453, 3151, 3193 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1190, 2778 |
| BstYI | RGATCY | 3 cut(s) | 1453, 3151, 3193 |
| Bsu15I | ATCGAT | 1 cut(s) | 327 |
| BsuRI | GGCC | 7 cut(s) | 353, 2152, 2268, 2533, 2831, 3115, 3139 |
| BsuTUI | ATCGAT | 1 cut(s) | 327 |
| BtgI | CCRYGG | 2 cut(s) | 1610, 3309 |
| BtgZI | GCGATG | 1 cut(s) | 3749 |
| BtsCI | GGATG | 8 cut(s) | 912, 943, 2905, 3190, 3394, 3507, 3592, 3702 |
| BtsI | GCAGTG | 2 cut(s) | 1413, 2783 |
| BveI | ACCTGC | 1 cut(s) | 880 |
| Cac8I | GCNNGC | 7 cut(s) | 358, 513, 1603, 1607, 2857, 3011, 3565 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1388, 2855 |
| CciI | TCATGA | 3 cut(s) | 646, 2479, 3400 |
| CfoI | GCGC | 5 cut(s) | 114, 122, 1607, 1609, 2715 |
| Cfr10I | RCCGGY | 3 cut(s) | 175, 356, 458 |
| Cfr13I | GGNCC | 4 cut(s) | 85, 796, 2266, 2267 |
| ClaI | ATCGAT | 1 cut(s) | 327 |
| CseI | GACGC | 4 cut(s) | 20, 167, 349, 3634 |
| Csp6I | GTAC | 7 cut(s) | 1151, 1167, 2720, 2793, 3057, 3716, 3899 |
| CviQI | GTAC | 7 cut(s) | 1151, 1167, 2720, 2793, 3057, 3716, 3899 |
| DpnI | GATC | 8 cut(s) | 326, 1303, 1455, 2118, 2563, 2742, 3153, 3195 |
| DpnII | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 161, 164 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1866 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 161, 164 |
| EaeI | YGGCCR | 2 cut(s) | 2829, 3113 |
| Eam1104I | CTCTTC | 3 cut(s) | 239, 3747, 3804 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1866 |
| EarI | CTCTTC | 3 cut(s) | 239, 3747, 3804 |
| EciI | GGCGGA | 3 cut(s) | 98, 1585, 2512 |
| Eco130I | CCWWGG | 6 cut(s) | 837, 1610, 1716, 3147, 3309, 3829 |
| Eco147I | AGGCCT | 2 cut(s) | 2152, 2533 |
| Eco24I | GRGCYC | 1 cut(s) | 2270 |
| Eco31I | GGTCTC | 2 cut(s) | 1173, 1952 |
| Eco47I | GGWCC | 2 cut(s) | 85, 796 |
| Eco57I | CTGAAG | 3 cut(s) | 990, 1133, 1683 |
| Eco72I | CACGTG | 1 cut(s) | 3721 |
| Eco88I | CYCGRG | 1 cut(s) | 1516 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1077, 2480 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2266, 2267 |
| EcoRI | GAATTC | 1 cut(s) | 1627 |
| EcoRII | CCWGG | 6 cut(s) | 1072, 1313, 1339, 1538, 2152, 3064 |
| EcoT14I | CCWWGG | 6 cut(s) | 837, 1610, 1716, 3147, 3309, 3829 |
| EcoT22I | ATGCAT | 2 cut(s) | 863, 3519 |
| EcoT38I | GRGCYC | 1 cut(s) | 2270 |
| ErhI | CCWWGG | 6 cut(s) | 837, 1610, 1716, 3147, 3309, 3829 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2071, 2103 |
| FaqI | GGGAC | 5 cut(s) | 1344, 2084, 2231, 3291, 3668 |
| FauNDI | CATATG | 1 cut(s) | 560 |
| FbaI | TGATCA | 1 cut(s) | 2116 |
| FblI | GTMKAC | 1 cut(s) | 2902 |
| FokI | GGATG | 8 cut(s) | 919, 930, 2892, 3197, 3401, 3514, 3599, 3709 |
| FriOI | GRGCYC | 1 cut(s) | 2270 |
| GlaI | GCGC | 5 cut(s) | 113, 121, 1606, 1608, 2714 |
| GsaI | CCCAGC | 2 cut(s) | 2523, 3501 |
| GsuI | CTGGAG | 4 cut(s) | 1026, 1125, 1749, 3785 |
| HaeIII | GGCC | 7 cut(s) | 353, 2152, 2268, 2533, 2831, 3115, 3139 |
| HapII | CCGG | 8 cut(s) | 80, 176, 182, 357, 459, 1362, 2832, 3197 |
| HgaI | GACGC | 4 cut(s) | 20, 167, 349, 3634 |
| HhaI | GCGC | 5 cut(s) | 114, 122, 1607, 1609, 2715 |
| Hin1I | GRCGYC | 4 cut(s) | 20, 132, 159, 360 |
| Hin6I | GCGC | 5 cut(s) | 112, 120, 1605, 1607, 2713 |
| HinP1I | GCGC | 5 cut(s) | 112, 120, 1605, 1607, 2713 |
| HincII | GTYRAC | 3 cut(s) | 2444, 3210, 3474 |
| HindII | GTYRAC | 3 cut(s) | 2444, 3210, 3474 |
| HindIII | AAGCTT | 2 cut(s) | 1574, 3252 |
| HpaII | CCGG | 8 cut(s) | 80, 176, 182, 357, 459, 1362, 2832, 3197 |
| HphI | GGTGA | 6 cut(s) | 274, 316, 1223, 1339, 1919, 3359 |
| Hpy99I | CGWCG | 9 cut(s) | 11, 14, 22, 25, 134, 158, 161, 167, 365 |
| HpyAV | CCTTC | 8 cut(s) | 112, 1950, 2486, 2549, 2754, 3297, 3378, 3799 |
| HpyCH4III | ACNGT | 9 cut(s) | 578, 1864, 2207, 2399, 2707, 2963, 3032, 3047, 3574 |
| HpyCH4IV | ACGT | 7 cut(s) | 20, 132, 916, 2240, 2566, 3720, 3847 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 65, 512, 640, 1431, 1440, 1693, 2149, 2158, 3010 |
| HpySE526I | ACGT | 7 cut(s) | 20, 132, 916, 2240, 2566, 3720, 3847 |
| Hsp92I | GRCGYC | 4 cut(s) | 20, 132, 159, 360 |
| HspAI | GCGC | 5 cut(s) | 112, 120, 1605, 1607, 2713 |
| Kpn2I | TCCGGA | 1 cut(s) | 3196 |
| KroI | GCCGGC | 1 cut(s) | 356 |
| KroNI | GCCGGC | 1 cut(s) | 358 |
| Ksp22I | TGATCA | 1 cut(s) | 2116 |
| Kzo9I | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| LguI | GCTCTTC | 1 cut(s) | 3747 |
| Lsp1109I | GCAGC | 9 cut(s) | 134, 375, 1375, 1397, 2011, 2148, 3478, 3554, 3583 |
| MaeII | ACGT | 7 cut(s) | 20, 132, 916, 2240, 2566, 3720, 3847 |
| MaeIII | GTNAC | 7 cut(s) | 70, 1015, 1985, 2180, 2845, 3537, 3622 |
| MalI | GATC | 8 cut(s) | 326, 1303, 1455, 2118, 2563, 2742, 3153, 3195 |
| MboI | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| MflI | RGATCY | 3 cut(s) | 1453, 3151, 3193 |
| MhlI | GDGCHC | 6 cut(s) | 288, 466, 2270, 2287, 3691, 3838 |
| MlyI | GAGTC | 4 cut(s) | 2319, 2416, 2767, 3391 |
| MmeI | TCCRAC | 3 cut(s) | 1554, 2381, 2444 |
| Mph1103I | ATGCAT | 2 cut(s) | 863, 3519 |
| MreI | CGCCGGCG | 1 cut(s) | 356 |
| MroI | TCCGGA | 1 cut(s) | 3196 |
| MroNI | GCCGGC | 1 cut(s) | 356 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1932, 2865 |
| MslI | CAYNNNNRTG | 3 cut(s) | 278, 1763, 3453 |
| MspA1I | CMGCKG | 4 cut(s) | 1388, 1727, 1846, 2161 |
| MspCI | CTTAAG | 2 cut(s) | 1435, 1769 |
| MspI | CCGG | 8 cut(s) | 80, 176, 182, 357, 459, 1362, 2832, 3197 |
| MspR9I | CCNGG | 9 cut(s) | 80, 1074, 1315, 1341, 1362, 1540, 2154, 2833, 3066 |
| Mva1269I | GAATGC | 2 cut(s) | 3287, 3517 |
| MvaI | CCWGG | 6 cut(s) | 1074, 1315, 1341, 1540, 2154, 3066 |
| MvnI | CGCG | 4 cut(s) | 112, 120, 448, 1607 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 65, 512, 640, 1431, 1440, 1693, 2149, 2158, 3010 |
| NaeI | GCCGGC | 1 cut(s) | 358 |
| NciI | CCSGG | 3 cut(s) | 80, 1362, 2833 |
| NcoI | CCATGG | 2 cut(s) | 1610, 3309 |
| NdeI | CATATG | 1 cut(s) | 560 |
| NdeII | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| NgoMIV | GCCGGC | 1 cut(s) | 356 |
| NheI | GCTAGC | 2 cut(s) | 1601, 3563 |
| NlaIV | GGNNCC | 8 cut(s) | 87, 180, 724, 2267, 2268, 2269, 3195, 3645 |
| NmeAIII | GCCGAG | 1 cut(s) | 3091 |
| NmuCI | GTSAC | 5 cut(s) | 70, 1015, 2180, 3537, 3622 |
| NsiI | ATGCAT | 2 cut(s) | 863, 3519 |
| NspI | RCATGY | 3 cut(s) | 2147, 2678, 3632 |
| NspV | TTCGAA | 1 cut(s) | 2788 |
| PaeR7I | CTCGAG | 1 cut(s) | 1516 |
| PagI | TCATGA | 3 cut(s) | 646, 2479, 3400 |
| PauI | GCGCGC | 1 cut(s) | 1605 |
| PceI | AGGCCT | 2 cut(s) | 2152, 2533 |
| PciSI | GCTCTTC | 1 cut(s) | 3747 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 159, 162, 2417, 3844 |
| PctI | GAATGC | 2 cut(s) | 3287, 3517 |
| PdiI | GCCGGC | 1 cut(s) | 358 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1932, 2865 |
| PflFI | GACNNNGTC | 1 cut(s) | 161 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 719 |
| PfoI | TCCNGGA | 1 cut(s) | 1339 |
| PleI | GAGTC | 4 cut(s) | 2318, 2416, 2766, 3391 |
| PmaCI | CACGTG | 1 cut(s) | 3721 |
| PmlI | CACGTG | 1 cut(s) | 3721 |
| PpsI | GAGTC | 4 cut(s) | 2318, 2416, 2766, 3391 |
| Ppu21I | YACGTR | 1 cut(s) | 3721 |
| PsiI | TTATAA | 1 cut(s) | 2688 |
| Psp1406I | AACGTT | 2 cut(s) | 2240, 3847 |
| Psp6I | CCWGG | 6 cut(s) | 1072, 1313, 1339, 1538, 2152, 3064 |
| PspCI | CACGTG | 1 cut(s) | 3721 |
| PspFI | CCCAGC | 2 cut(s) | 2519, 3497 |
| PspGI | CCWGG | 6 cut(s) | 1072, 1313, 1339, 1538, 2152, 3064 |
| PspN4I | GGNNCC | 8 cut(s) | 87, 180, 724, 2267, 2268, 2269, 3195, 3645 |
| PspOMI | GGGCCC | 1 cut(s) | 2266 |
| PspPI | GGNCC | 4 cut(s) | 85, 796, 2266, 2267 |
| PspXI | VCTCGAGB | 1 cut(s) | 1516 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1388, 2855 |
| PsuI | RGATCY | 3 cut(s) | 1453, 3151, 3193 |
| PsyI | GACNNNGTC | 1 cut(s) | 161 |
| PteI | GCGCGC | 1 cut(s) | 1605 |
| PvuII | CAGCTG | 4 cut(s) | 1388, 1727, 1846, 2161 |
| RsaI | GTAC | 7 cut(s) | 1152, 1168, 2721, 2794, 3058, 3717, 3900 |
| RsaNI | GTAC | 7 cut(s) | 1151, 1167, 2720, 2793, 3057, 3716, 3899 |
| RseI | CAYNNNNRTG | 3 cut(s) | 278, 1763, 3453 |
| SapI | GCTCTTC | 1 cut(s) | 3747 |
| Sau3AI | GATC | 8 cut(s) | 324, 1301, 1453, 2116, 2561, 2740, 3151, 3193 |
| Sau96I | GGNCC | 4 cut(s) | 85, 796, 2266, 2267 |
| SchI | GAGTC | 4 cut(s) | 2319, 2416, 2767, 3391 |
| ScrFI | CCNGG | 9 cut(s) | 80, 1074, 1315, 1341, 1362, 1540, 2154, 2833, 3066 |
| SduI | GDGCHC | 6 cut(s) | 288, 466, 2270, 2287, 3691, 3838 |
| SfcI | CTRYAG | 1 cut(s) | 1618 |
| Sfr274I | CTCGAG | 1 cut(s) | 1516 |
| SfuI | TTCGAA | 1 cut(s) | 2788 |
| SgrAI | CRCCGGYG | 2 cut(s) | 175, 356 |
| SinI | GGWCC | 2 cut(s) | 85, 796 |
| SlaI | CTCGAG | 1 cut(s) | 1516 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 278, 1763, 3453 |
| SmlI | CTYRAG | 7 cut(s) | 478, 1435, 1516, 1769, 2341, 2468, 3443 |
| SmoI | CTYRAG | 7 cut(s) | 478, 1435, 1516, 1769, 2341, 2468, 3443 |
| SseBI | AGGCCT | 2 cut(s) | 2152, 2533 |
| SsiI | CCGC | 8 cut(s) | 45, 83, 118, 354, 448, 1570, 2068, 2497 |
| SspI | AATATT | 1 cut(s) | 2944 |
| StuI | AGGCCT | 2 cut(s) | 2152, 2533 |
| StyD4I | CCNGG | 9 cut(s) | 78, 1072, 1313, 1339, 1360, 1538, 2152, 2831, 3064 |
| StyI | CCWWGG | 6 cut(s) | 837, 1610, 1716, 3147, 3309, 3829 |
| TaaI | ACNGT | 9 cut(s) | 578, 1864, 2207, 2399, 2707, 2963, 3032, 3047, 3574 |
| TaiI | ACGT | 7 cut(s) | 23, 135, 919, 2243, 2569, 3723, 3850 |
| TaqI | TCGA | 6 cut(s) | 327, 348, 472, 1517, 2788, 3027 |
| TatI | WGTACW | 5 cut(s) | 1166, 2719, 2792, 3056, 3715 |
| TauI | GCSGC | 2 cut(s) | 48, 356 |
| TseFI | GTSAC | 5 cut(s) | 70, 1015, 2180, 3537, 3622 |
| TseI | GCWGC | 9 cut(s) | 122, 388, 1385, 1388, 2024, 2161, 3466, 3567, 3596 |
| Tsp45I | GTSAC | 5 cut(s) | 70, 1015, 2180, 3537, 3622 |
| TspGWI | ACGGA | 1 cut(s) | 3916 |
| Tth111I | GACNNNGTC | 1 cut(s) | 161 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 719 |
| Vha464I | CTTAAG | 2 cut(s) | 1435, 1769 |
| VneI | GTGCAC | 2 cut(s) | 284, 2283 |
| VpaK11BI | GGWCC | 2 cut(s) | 85, 796 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1077, 2480 |
| XapI | RAATTY | 8 cut(s) | 651, 1335, 1627, 1792, 2107, 2783, 3359, 3409 |
| XceI | RCATGY | 3 cut(s) | 2147, 2678, 3632 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3132 |
| XhoI | CTCGAG | 1 cut(s) | 1516 |
| XmiI | GTMKAC | 1 cut(s) | 2902 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1932, 2865 |
| ZraI | GACGTC | 2 cut(s) | 21, 133 |
| Zsp2I | ATGCAT | 2 cut(s) | 863, 3519 |