Prupe.2G137700_v2.0.a1
MYB Family

At2g29880-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
19491406 .. 19492979
1574 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G137700.1

Sequence Viewer

Length: 312 bp
ATGGGGAATCCACAACAAGGAAATAACAAAGGAAATGGTAAAGTTTCTGAGAACTATGAATTTTGGACCATGGATGATACCAACGAGTTGTTGCACCTCTTGGTGGATGCTATCAATAGTGGATTGTGTGATGCTAATGGGTCACTTAGCAAGCAAAATGTAGAAAGAGTGATACTTCCTCGTCTTAGTGCGAAAATTATATTTCCAAAAACTTATAATCATTACTTGAGCAGAAAGAAGTGGTTTAGGAAGCATTATAACAAGATATCTACGCTTATGCATAACAACTCTGGGTTTGGGCTAGACTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.77

Weight (kDa)

9.34

Isoelectric Point (pI)

32.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 216, 258
AcsI RAATTY 1 cut(s) 59
AfiI CCNNNNNNNGG 2 cut(s) 17, 103
ApoI RAATTY 1 cut(s) 59
AspS9I GGNCC 1 cut(s) 66
AvaII GGWCC 1 cut(s) 66
BfaI CTAG 1 cut(s) 302
Bme18I GGWCC 1 cut(s) 66
BmgT120I GGNCC 1 cut(s) 66
BmsI GCATC 2 cut(s) 97, 121
BpuEI CTTGAG 1 cut(s) 247
BsaJI CCNNGG 1 cut(s) 69
Bsc4I CCNNNNNNNGG 2 cut(s) 17, 103
BseDI CCNNGG 1 cut(s) 69
BseGI GGATG 2 cut(s) 79, 112
BseLI CCNNNNNNNGG 2 cut(s) 17, 103
BseMII CTCAG 1 cut(s) 39
BslI CCNNNNNNNGG 2 cut(s) 17, 103
Bsp19I CCATGG 1 cut(s) 69
BspCNI CTCAG 1 cut(s) 40
BssECI CCNNGG 1 cut(s) 69
BssT1I CCWWGG 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 152
BstDEI CTNAG 3 cut(s) 48, 146, 185
BstDSI CCRYGG 1 cut(s) 69
BstF5I GGATG 2 cut(s) 79, 112
BtgI CCRYGG 1 cut(s) 69
BtsCI GGATG 2 cut(s) 79, 112
Cac8I GCNNGC 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 66
CviAII CATG 1 cut(s) 70
CviJI RGCY 1 cut(s) 301
CviKI_1 RGCY 1 cut(s) 301
DdeI CTNAG 3 cut(s) 48, 146, 185
Eco130I CCWWGG 1 cut(s) 69
Eco32I GATATC 1 cut(s) 267
Eco47I GGWCC 1 cut(s) 66
EcoRV GATATC 1 cut(s) 267
EcoT14I CCWWGG 1 cut(s) 69
EcoT22I ATGCAT 1 cut(s) 282
ErhI CCWWGG 1 cut(s) 69
FaeI CATG 1 cut(s) 73
FaiI YATR 8 cut(s) 57, 71, 200, 216, 258, 278, 282, 310
FatI CATG 1 cut(s) 69
FokI GGATG 2 cut(s) 86, 119
FspBI CTAG 1 cut(s) 302
Hin1II CATG 1 cut(s) 73
HinfI GANTC 2 cut(s) 7, 305
Hpy188I TCNGA 1 cut(s) 49
HpyCH4V TGCA 2 cut(s) 94, 280
HpyF3I CTNAG 3 cut(s) 48, 146, 185
Hsp92II CATG 1 cut(s) 73
LpnPI CCDG 1 cut(s) 276
LweI GCATC 2 cut(s) 97, 121
MaeI CTAG 1 cut(s) 302
MaeIII GTNAC 1 cut(s) 141
MluCI AATT 2 cut(s) 59, 195
MlyI GAGTC 1 cut(s) 299
MnlI CCTC 2 cut(s) 107, 189
Mph1103I ATGCAT 1 cut(s) 282
NcoI CCATGG 1 cut(s) 69
NlaIII CATG 1 cut(s) 73
NmuCI GTSAC 1 cut(s) 141
NsiI ATGCAT 1 cut(s) 282
PfeI GAWTC 1 cut(s) 7
PleI GAGTC 1 cut(s) 299
PpsI GAGTC 1 cut(s) 299
PsiI TTATAA 2 cut(s) 216, 258
PspPI GGNCC 1 cut(s) 66
Sau96I GGNCC 1 cut(s) 66
SchI GAGTC 1 cut(s) 299
SetI ASST 1 cut(s) 99
SfaNI GCATC 2 cut(s) 97, 121
SgeI CNNG 9 cut(s) 29, 82, 97, 112, 163, 192, 238, 274, 303
SinI GGWCC 1 cut(s) 66
SmlI CTYRAG 1 cut(s) 226
SmoI CTYRAG 1 cut(s) 226
Sse9I AATT 2 cut(s) 59, 195
SspMI CTAG 1 cut(s) 302
StyI CCWWGG 1 cut(s) 69
TasI AATT 2 cut(s) 59, 195
TfiI GAWTC 1 cut(s) 7
TseFI GTSAC 1 cut(s) 141
Tsp45I GTSAC 1 cut(s) 141
TspDTI ATGAA 1 cut(s) 72
VpaK11BI GGWCC 1 cut(s) 66
XapI RAATTY 1 cut(s) 59
XspI CTAG 1 cut(s) 302
Zsp2I ATGCAT 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.