Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0018272

Physical Location & Seq

Genomic Coordinates Reverse (-)

1331687 .. 1332811

Gene Structure 1125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G010100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 951 bp

ATGGGGGATTCACAACAAGAAAATAACAAAGGAAAGGGCAAAGAGAAAGAGAACTATGAATCTTGGACCATGGACGATACCAATGAGTTGTTGCATCTCTTGGTGGATGCTATCAATAGTGGATTGCGTGATGCTAATGGATCACTTAGCAAGCAAAATGTAGAAAGAGTGATACTTCCTCGTCTTAATGCGAAAATTAGGTTCCCTAAAACTTATAATCATTATTTGAGTCGAATGAAGTGGTTTAAGAAGCAATATAACAAGATGTCGACGCTTATGCGTAACAACTCTGGCTTTGGTCACAGTAAACTTAAAGAAAAAAGTGTAGTTGATTATGAGGATTTGAAGATTGTCGTTGGGAGTGGAACTGCTACTGGGAATGGTTCCACTGCATTAGGCGCTGATGATACCGATGCAACAACTTATGGTGAAGAAAATAGAGATTTTGGGATGGAAGACTTTTCATATGATCCTAACAATGATGCGTTCATAGCACCAAATCACTATGAACCATCCTACCAGCCTCCATTACCCCGCCAATGCAGTCCACCATCTCATTCCCCTTTAGGTTCGGAGGTTCCCACTAAAAAATCAAGCCGCAATAAGCGAAATAGATCCGAGTATGAAGGGAGTTCTAGATCAGTTGGGACCAACAATCAAGCCAAAGTTCTAGAAAATCTTTCTATTGGCATTGAGACTACTTCTACCAATTTTGAAAAAATATCTAACCTAATGGAGAAAAGAGAGAGAGATAGAGAGCTCAATGAAATAGAGAAAAGAGAAAGAGAGAGAAAAAGTAATATTTGGGATGCTATAAAAGAGATTCCAAATTTGGATGACAATACTCATTACATGGCAGGTGATTTGCTTAATACTAAAGCAAAAAAGGACTTGTTCTTGAAGATGTCATTGGAAGAGCACTCATCTTGGATAAACTTCAAGTTAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_3

Protein Analysis

317

Amino Acids

36.04

Weight (kDa)

6.69

Isoelectric Point (pI)

42.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018272)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28820
prunus_persica	Prupe.1G177900_v2.0.a1 Prupe.2G137700_v2.0.a1 Prupe.3G105400_v2.0.a1 Prupe.5G010600_v2.0.a1 Prupe.6G148000_v2.0.a1 Prupe.7G010100_v2.0.a1 Prupe.7G052500_v2.0.a1 Prupe.7G084200_v2.0.a1 Prupe.8G061600_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	216
AarI	CACCTGC	1 cut(s)	848
Acc36I	ACCTGC	1 cut(s)	848
AccI	GTMKAC	1 cut(s)	269
AciI	CCGC	2 cut(s)	535, 598
AclWI	GGATC	3 cut(s)	148, 464, 609
AcsI	RAATTY	1 cut(s)	829
AgsI	TTSAA	4 cut(s)	346, 716, 901, 940
AjuI	GAANNNNNNNTTGG	2 cut(s)	893, 925
AluBI	AGCT	1 cut(s)	760
AluI	AGCT	1 cut(s)	760
Alw21I	GWGCWC	2 cut(s)	762, 921
Alw26I	GTCTC	1 cut(s)	689
AlwI	GGATC	3 cut(s)	148, 464, 609
ApoI	RAATTY	1 cut(s)	829
AspLEI	GCGC	1 cut(s)	401
AspS9I	GGNCC	2 cut(s)	66, 648
AsuHPI	GGTGA	2 cut(s)	440, 872
AvaII	GGWCC	2 cut(s)	66, 648
BanII	GRGCYC	1 cut(s)	762
BbsI	GAAGAC	1 cut(s)	462
Bbv12I	GWGCWC	2 cut(s)	762, 921
BccI	CCATC	3 cut(s)	445, 520, 559
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BcoDI	GTCTC	1 cut(s)	689
BfaI	CTAG	2 cut(s)	636, 671
BfoI	RGCGCY	1 cut(s)	402
BfuAI	ACCTGC	1 cut(s)	848
BisI	GCNGC	1 cut(s)	598
BlsI	GCNGC	1 cut(s)	599
Bme18I	GGWCC	2 cut(s)	66, 648
BmgT120I	GGNCC	2 cut(s)	66, 648
BmiI	GGNNCC	4 cut(s)	203, 385, 579, 649
BmrI	ACTGGG	1 cut(s)	384
BmsI	GCATC	6 cut(s)	97, 103, 121, 403, 472, 799
BmuI	ACTGGG	1 cut(s)	384
BpiI	GAAGAC	1 cut(s)	462
BsaJI	CCNNGG	1 cut(s)	69
Bse1I	ACTGG	1 cut(s)	379
BseDI	CCNNGG	1 cut(s)	69
BseGI	GGATG	5 cut(s)	112, 456, 512, 814, 841
BseNI	ACTGG	1 cut(s)	379
BsiHKAI	GWGCWC	2 cut(s)	762, 921
BslFI	GGGAC	1 cut(s)	661
BsmAI	GTCTC	1 cut(s)	689
BsmFI	GGGAC	1 cut(s)	661
Bsp1286I	GDGCHC	2 cut(s)	762, 921
Bsp143I	GATC	4 cut(s)	140, 469, 614, 638
Bsp19I	CCATGG	1 cut(s)	69
BspACI	CCGC	2 cut(s)	535, 598
BspLI	GGNNCC	4 cut(s)	203, 385, 579, 649
BspMI	ACCTGC	1 cut(s)	848
BspPI	GGATC	3 cut(s)	148, 464, 609
BspQI	GCTCTTC	1 cut(s)	909
BsrI	ACTGG	1 cut(s)	379
BssECI	CCNNGG	1 cut(s)	69
BssMI	GATC	4 cut(s)	140, 469, 614, 638
BssT1I	CCWWGG	1 cut(s)	69
Bst4CI	ACNGT	1 cut(s)	305
Bst6I	CTCTTC	1 cut(s)	909
BstC8I	GCNNGC	1 cut(s)	152
BstDEI	CTNAG	1 cut(s)	146
BstDSI	CCRYGG	1 cut(s)	69
BstF5I	GGATG	5 cut(s)	112, 456, 512, 814, 841
BstH2I	RGCGCY	1 cut(s)	402
BstHHI	GCGC	1 cut(s)	401
BstKTI	GATC	4 cut(s)	143, 472, 617, 641
BstMAI	GTCTC	1 cut(s)	689
BstMBI	GATC	4 cut(s)	140, 469, 614, 638
BstMWI	GCNNNNNNNGC	2 cut(s)	398, 491
BstV2I	GAAGAC	1 cut(s)	462
BstX2I	RGATCY	1 cut(s)	614
BstYI	RGATCY	1 cut(s)	614
BtgI	CCRYGG	1 cut(s)	69
BtsCI	GGATG	5 cut(s)	112, 456, 512, 814, 841
BtsI	GCAGTG	1 cut(s)	387
BtsIMutI	CAGTG	1 cut(s)	387
BveI	ACCTGC	1 cut(s)	848
Cac8I	GCNNGC	1 cut(s)	152
CfoI	GCGC	1 cut(s)	401
Cfr13I	GGNCC	2 cut(s)	66, 648
CseI	GACGC	1 cut(s)	280
CviAII	CATG	2 cut(s)	70, 853
CviJI	RGCY	5 cut(s)	294, 523, 597, 662, 760
CviKI_1	RGCY	5 cut(s)	294, 523, 597, 662, 760
DdeI	CTNAG	1 cut(s)	146
DpnI	GATC	4 cut(s)	142, 471, 616, 640
DpnII	GATC	4 cut(s)	140, 469, 614, 638
Eam1104I	CTCTTC	1 cut(s)	909
EarI	CTCTTC	1 cut(s)	909
Ecl136II	GAGCTC	1 cut(s)	760
Eco130I	CCWWGG	1 cut(s)	69
Eco24I	GRGCYC	1 cut(s)	762
Eco47I	GGWCC	2 cut(s)	66, 648
Eco53kI	GAGCTC	1 cut(s)	760
EcoICRI	GAGCTC	1 cut(s)	760
EcoT14I	CCWWGG	1 cut(s)	69
EcoT38I	GRGCYC	1 cut(s)	762
ErhI	CCWWGG	1 cut(s)	69
FaeI	CATG	2 cut(s)	73, 856
FaqI	GGGAC	1 cut(s)	661
FatI	CATG	2 cut(s)	69, 852
FauI	CCCGC	1 cut(s)	542
FauNDI	CATATG	1 cut(s)	466
FblI	GTMKAC	1 cut(s)	269
Fnu4HI	GCNGC	1 cut(s)	598
FokI	GGATG	5 cut(s)	119, 463, 499, 821, 848
FriOI	GRGCYC	1 cut(s)	762
Fsp4HI	GCNGC	1 cut(s)	598
FspBI	CTAG	2 cut(s)	636, 671
GlaI	GCGC	1 cut(s)	400
GluI	GCNGC	1 cut(s)	598
HaeII	RGCGCY	1 cut(s)	402
HgaI	GACGC	1 cut(s)	280
HhaI	GCGC	1 cut(s)	401
Hin1II	CATG	2 cut(s)	73, 856
Hin6I	GCGC	1 cut(s)	399
HinP1I	GCGC	1 cut(s)	399
HincII	GTYRAC	1 cut(s)	270
HindII	GTYRAC	1 cut(s)	270
HinfI	GANTC	4 cut(s)	8, 59, 229, 823
HphI	GGTGA	2 cut(s)	440, 872
Hpy166II	GTNNAC	3 cut(s)	270, 308, 548
Hpy188I	TCNGA	2 cut(s)	574, 619
Hpy188III	TCNNGA	3 cut(s)	636, 671, 898
Hpy8I	GTNNAC	3 cut(s)	270, 308, 548
Hpy99I	CGWCG	1 cut(s)	274
HpyAV	CCTTC	1 cut(s)	620
HpyCH4III	ACNGT	1 cut(s)	305
HpyCH4V	TGCA	4 cut(s)	94, 392, 416, 543
HpyF10VI	GCNNNNNNNGC	2 cut(s)	398, 491
HpyF3I	CTNAG	1 cut(s)	146
Hsp92II	CATG	2 cut(s)	73, 856
HspAI	GCGC	1 cut(s)	399
Kzo9I	GATC	4 cut(s)	140, 469, 614, 638
LguI	GCTCTTC	1 cut(s)	909
LpnPI	CCDG	4 cut(s)	276, 360, 533, 843
LweI	GCATC	6 cut(s)	97, 103, 121, 403, 472, 799
MaeI	CTAG	2 cut(s)	636, 671
MaeIII	GTNAC	2 cut(s)	281, 299
MalI	GATC	4 cut(s)	142, 471, 616, 640
MboI	GATC	4 cut(s)	140, 469, 614, 638
MboII	GAAGA	5 cut(s)	358, 443, 467, 913, 926
MflI	RGATCY	1 cut(s)	614
MhlI	GDGCHC	2 cut(s)	762, 921
MluCI	AATT	3 cut(s)	195, 709, 829
MlyI	GAGTC	1 cut(s)	238
MnlI	CCTC	4 cut(s)	189, 331, 534, 568
MseI	TTAA	4 cut(s)	186, 246, 312, 870
MwoI	GCNNNNNNNGC	2 cut(s)	398, 491
NcoI	CCATGG	1 cut(s)	69
NdeI	CATATG	1 cut(s)	466
NdeII	GATC	4 cut(s)	140, 469, 614, 638
NlaIII	CATG	2 cut(s)	73, 856
NlaIV	GGNNCC	4 cut(s)	203, 385, 579, 649
NmuCI	GTSAC	1 cut(s)	299
PaqCI	CACCTGC	1 cut(s)	848
PciSI	GCTCTTC	1 cut(s)	909
PfeI	GAWTC	3 cut(s)	8, 59, 823
PkrI	GCNGC	1 cut(s)	599
PleI	GAGTC	1 cut(s)	237
PpsI	GAGTC	1 cut(s)	237
PsiI	TTATAA	1 cut(s)	216
Psp124BI	GAGCTC	1 cut(s)	762
PspN4I	GGNNCC	4 cut(s)	203, 385, 579, 649
PspPI	GGNCC	2 cut(s)	66, 648
PsuI	RGATCY	1 cut(s)	614
SacI	GAGCTC	1 cut(s)	762
SalI	GTCGAC	1 cut(s)	268
SapI	GCTCTTC	1 cut(s)	909
SaqAI	TTAA	4 cut(s)	186, 246, 312, 870
SatI	GCNGC	1 cut(s)	598
Sau3AI	GATC	4 cut(s)	140, 469, 614, 638
Sau96I	GGNCC	2 cut(s)	66, 648
SchI	GAGTC	1 cut(s)	238
SduI	GDGCHC	2 cut(s)	762, 921
SetI	ASST	6 cut(s)	203, 571, 579, 732, 762, 862
SfaNI	GCATC	6 cut(s)	97, 103, 121, 403, 472, 799
SinI	GGWCC	2 cut(s)	66, 648
Sse9I	AATT	3 cut(s)	195, 709, 829
SsiI	CCGC	2 cut(s)	535, 598
SspI	AATATT	1 cut(s)	802
SspMI	CTAG	2 cut(s)	636, 671
SstI	GAGCTC	1 cut(s)	762
StyI	CCWWGG	1 cut(s)	69
TaaI	ACNGT	1 cut(s)	305
TaqI	TCGA	2 cut(s)	232, 269
TasI	AATT	3 cut(s)	195, 709, 829
TauI	GCSGC	1 cut(s)	600
TfiI	GAWTC	3 cut(s)	8, 59, 823
Tru1I	TTAA	4 cut(s)	186, 246, 312, 870
Tru9I	TTAA	4 cut(s)	186, 246, 312, 870
TscAI	CASTG	1 cut(s)	394
TseFI	GTSAC	1 cut(s)	299
Tsp45I	GTSAC	1 cut(s)	299
TspDTI	ATGAA	7 cut(s)	72, 251, 453, 478, 522, 639, 780
TspRI	CASTG	1 cut(s)	394
VpaK11BI	GGWCC	2 cut(s)	66, 648
XapI	RAATTY	1 cut(s)	829
XbaI	TCTAGA	2 cut(s)	635, 670
XmiI	GTMKAC	1 cut(s)	269
XspI	CTAG	2 cut(s)	636, 671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.