Prupe.7G052500_v2.0.a1
MYB Family

At2g29880-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
9057494 .. 9058281
788 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G052500.1

Sequence Viewer

Length: 681 bp
ATGGGGGATTCACAACATGAAAATAGCAAAAGAAAGGGCAAAGGTTCTGAGATCTATGAATCTAGGACTATGGACGATACCAATGAGTTGTTACACCTTTTAGTGGATGCTGTCAATAGTGGATTGCGTGATGCTAATGGGACACTTAGCAAGCAAAATGTAGAAAGAGTGATACTTCCTCGTCTTAATGCGAAAATTAGGTTTCCAAAAACTTACAATCATTACTTGAGCCGAATGAAGTGGTTTAAGAAGCAATCTAACAAGATGTCTACACTTATGCGTAACAACTCTGGCTTTGGGTGGGACCCAATTGCAGAGACGCTCACTCCTAGTGATGAAGCATGGAAAGATTACTTGAAGTCCCACCTAAGTCACAGTAAACTTCAGGAAAGTAGTCTAGTTGATTATGAGGATTTGAAGATTGTCGTTAGGGGTGGAACTGCTACTGGCAATGGCTCGATTGCATTAGGCATTGATGAGACCAATGCAAGAACTTATGGGGTTGAAGAAAATAAAGATTTAGGGATGAAAGACTTTCTAGACAATCTTTCGATTGGGACCAACAGTCAAGCCAAAGTTCTAGACAATCTTTCTATTGGCATTGAGACTATTTCTGCTAATTTTGAAAGAATATCTAACCTAACGGAGAAAAAGACAGAGATAGAGAACTCAATGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

227

Amino Acids

25.4

Weight (kDa)

6.54

Isoelectric Point (pI)

32.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 269
AcuI CTGAAG 1 cut(s) 368
AfiI CCNNNNNNNGG 1 cut(s) 103
AgsI TTSAA 4 cut(s) 358, 418, 506, 626
AhdI GACNNNNNGTC 1 cut(s) 564
Alw26I GTCTC 3 cut(s) 311, 473, 599
AspS9I GGNCC 2 cut(s) 304, 558
AvaII GGWCC 2 cut(s) 304, 558
BcoDI GTCTC 3 cut(s) 311, 473, 599
BfaI CTAG 5 cut(s) 63, 330, 398, 539, 581
BglII AGATCT 1 cut(s) 51
Bme18I GGWCC 2 cut(s) 304, 558
BmeRI GACNNNNNGTC 1 cut(s) 564
BmgT120I GGNCC 2 cut(s) 304, 558
BmiI GGNNCC 3 cut(s) 305, 306, 559
BmsI GCATC 2 cut(s) 97, 121
BpuEI CTTGAG 1 cut(s) 247
BsaI GGTCTC 1 cut(s) 473
BsaXI ACNNNNNCTCC 2 cut(s) 310, 340
Bsc4I CCNNNNNNNGG 1 cut(s) 103
Bse1I ACTGG 1 cut(s) 451
Bse3DI GCAATG 1 cut(s) 457
BseGI GGATG 2 cut(s) 112, 531
BseLI CCNNNNNNNGG 1 cut(s) 103
BseMI GCAATG 1 cut(s) 457
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 1 cut(s) 451
BslFI GGGAC 4 cut(s) 154, 317, 346, 571
BslI CCNNNNNNNGG 1 cut(s) 103
BsmAI GTCTC 3 cut(s) 311, 473, 599
BsmBI CGTCTC 1 cut(s) 311
BsmFI GGGAC 4 cut(s) 154, 317, 346, 571
Bso31I GGTCTC 1 cut(s) 473
Bsp143I GATC 1 cut(s) 51
BspCNI CTCAG 1 cut(s) 40
BspLI GGNNCC 3 cut(s) 305, 306, 559
BspTNI GGTCTC 1 cut(s) 473
BsrDI GCAATG 1 cut(s) 457
BsrI ACTGG 1 cut(s) 451
BssMI GATC 1 cut(s) 51
Bst4CI ACNGT 2 cut(s) 377, 566
BstC8I GCNNGC 1 cut(s) 152
BstDEI CTNAG 3 cut(s) 48, 146, 368
BstF5I GGATG 2 cut(s) 112, 531
BstKTI GATC 1 cut(s) 54
BstMAI GTCTC 3 cut(s) 311, 473, 599
BstMBI GATC 1 cut(s) 51
BstX2I RGATCY 1 cut(s) 51
BstYI RGATCY 1 cut(s) 51
BtsCI GGATG 2 cut(s) 112, 531
Cac8I GCNNGC 1 cut(s) 152
Cfr13I GGNCC 2 cut(s) 304, 558
CseI GACGC 1 cut(s) 328
CviAII CATG 2 cut(s) 17, 342
CviJI RGCY 4 cut(s) 231, 294, 456, 572
CviKI_1 RGCY 4 cut(s) 231, 294, 456, 572
DdeI CTNAG 3 cut(s) 48, 146, 368
DpnI GATC 1 cut(s) 53
DpnII GATC 1 cut(s) 51
DriI GACNNNNNGTC 1 cut(s) 564
Eam1105I GACNNNNNGTC 1 cut(s) 564
Eco31I GGTCTC 1 cut(s) 473
Eco47I GGWCC 2 cut(s) 304, 558
Eco57I CTGAAG 1 cut(s) 368
EcoO109I RGGNCCY 1 cut(s) 304
Esp3I CGTCTC 1 cut(s) 311
FaeI CATG 2 cut(s) 20, 345
FaiI YATR 7 cut(s) 18, 57, 71, 278, 343, 408, 498
FaqI GGGAC 4 cut(s) 154, 317, 346, 571
FatI CATG 2 cut(s) 16, 341
FblI GTMKAC 1 cut(s) 269
FokI GGATG 2 cut(s) 119, 538
FspBI CTAG 5 cut(s) 63, 330, 398, 539, 581
HgaI GACGC 1 cut(s) 328
Hin1II CATG 2 cut(s) 20, 345
HinfI GANTC 2 cut(s) 8, 59
Hpy166II GTNNAC 2 cut(s) 270, 380
Hpy188I TCNGA 1 cut(s) 49
Hpy188III TCNNGA 3 cut(s) 386, 539, 581
Hpy8I GTNNAC 2 cut(s) 270, 380
HpyCH4III ACNGT 2 cut(s) 377, 566
HpyCH4V TGCA 3 cut(s) 314, 464, 488
HpyF3I CTNAG 3 cut(s) 48, 146, 368
Hsp92II CATG 2 cut(s) 20, 345
KflI GGGWCCC 1 cut(s) 304
Kzo9I GATC 1 cut(s) 51
LpnPI CCDG 3 cut(s) 276, 371, 432
LweI GCATC 2 cut(s) 97, 121
MaeI CTAG 5 cut(s) 63, 330, 398, 539, 581
MaeIII GTNAC 3 cut(s) 90, 281, 371
MalI GATC 1 cut(s) 53
MboI GATC 1 cut(s) 51
MboII GAAGA 2 cut(s) 430, 518
MfeI CAATTG 1 cut(s) 309
MflI RGATCY 1 cut(s) 51
MluCI AATT 3 cut(s) 195, 309, 619
MnlI CCTC 2 cut(s) 189, 403
MseI TTAA 2 cut(s) 186, 246
MunI CAATTG 1 cut(s) 309
NdeII GATC 1 cut(s) 51
NlaIII CATG 2 cut(s) 20, 345
NlaIV GGNNCC 3 cut(s) 305, 306, 559
NmuCI GTSAC 1 cut(s) 371
PfeI GAWTC 2 cut(s) 8, 59
PpuMI RGGWCCY 1 cut(s) 304
Psp5II RGGWCCY 1 cut(s) 304
PspN4I GGNNCC 3 cut(s) 305, 306, 559
PspPI GGNCC 2 cut(s) 304, 558
PspPPI RGGWCCY 1 cut(s) 304
PsuI RGATCY 1 cut(s) 51
SaqAI TTAA 2 cut(s) 186, 246
Sau3AI GATC 1 cut(s) 51
Sau96I GGNCC 2 cut(s) 304, 558
SetI ASST 5 cut(s) 46, 99, 203, 369, 642
SfaNI GCATC 2 cut(s) 97, 121
SinI GGWCC 2 cut(s) 304, 558
SmlI CTYRAG 1 cut(s) 226
SmoI CTYRAG 1 cut(s) 226
Sse9I AATT 3 cut(s) 195, 309, 619
SspMI CTAG 5 cut(s) 63, 330, 398, 539, 581
TaaI ACNGT 2 cut(s) 377, 566
TaqI TCGA 2 cut(s) 458, 551
TasI AATT 3 cut(s) 195, 309, 619
TfiI GAWTC 2 cut(s) 8, 59
Tru1I TTAA 2 cut(s) 186, 246
Tru9I TTAA 2 cut(s) 186, 246
TseFI GTSAC 1 cut(s) 371
Tsp45I GTSAC 1 cut(s) 371
TspDTI ATGAA 5 cut(s) 33, 72, 251, 351, 542
TspGWI ACGGA 1 cut(s) 659
VpaK11BI GGWCC 2 cut(s) 304, 558
XbaI TCTAGA 2 cut(s) 538, 580
XmiI GTMKAC 1 cut(s) 269
XspI CTAG 5 cut(s) 63, 330, 398, 539, 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.