Prupe.7G084200_v2.0.a1
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
11963515 .. 11964163
649 bp
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UTR
Exon/CDS
Intron
Prupe.7G084200.1

Sequence Viewer

Length: 456 bp
ATGGACGATGCCAATGAATTGTTGCACCTCTTGGTGGATGCTAGCAATACTGGATTGCATGATGCTAATGGGTCACTTAGCAAGCAAAATGTAGAAAGAGTGATATTTCCTCGTCTTAATGCGAAAATTAGGTTCCCAAAAACTTATAATCATTACTTGAGCCGAATGAAGTGGTTTAAGAAGCAATATAACAAGATGTCTACGCTTATGCTTAACAACTCTGGCTTTGGGTGGGACCCAATTGCAAAGACGTTAACTGCTAGTGATAAAGTATGGAAAGATTACTTGAAGTCCCACCCAAGTCACAGTAAACTTCGAGAAAAAAGTGTAGTTGATTATGAGGATTTGAAGATTGTTGTTGGGGGTGGAACTGCTACTGGGAATAGCTCCATTGCATGGACGCTGATGATACCGATGCAACAACTTATGGGGAAGAAAATAGAGATTTCGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

152

Amino Acids

17.1

Weight (kDa)

9.6

Isoelectric Point (pI)

22.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 147
AccB7I CCANNNNNTGG 1 cut(s) 396
AccI GTMKAC 1 cut(s) 200
AfiI CCNNNNNNNGG 2 cut(s) 34, 396
AgsI TTSAA 2 cut(s) 289, 349
AluBI AGCT 1 cut(s) 387
AluI AGCT 1 cut(s) 387
AspS9I GGNCC 1 cut(s) 235
AsuNHI GCTAGC 1 cut(s) 41
AvaII GGWCC 1 cut(s) 235
BfaI CTAG 2 cut(s) 42, 261
Bme18I GGWCC 1 cut(s) 235
BmgT120I GGNCC 1 cut(s) 235
BmiI GGNNCC 3 cut(s) 134, 236, 237
BmrI ACTGGG 1 cut(s) 387
BmsI GCATC 3 cut(s) 28, 52, 405
BmtI GCTAGC 1 cut(s) 45
BmuI ACTGGG 1 cut(s) 387
BpuEI CTTGAG 1 cut(s) 178
Bsc4I CCNNNNNNNGG 2 cut(s) 34, 396
Bse1I ACTGG 2 cut(s) 55, 382
Bse3DI GCAATG 1 cut(s) 390
BseGI GGATG 1 cut(s) 43
BseLI CCNNNNNNNGG 2 cut(s) 34, 396
BseMI GCAATG 1 cut(s) 390
BseNI ACTGG 2 cut(s) 55, 382
BslFI GGGAC 2 cut(s) 248, 277
BslI CCNNNNNNNGG 2 cut(s) 34, 396
BsmFI GGGAC 2 cut(s) 248, 277
BspLI GGNNCC 3 cut(s) 134, 236, 237
BspOI GCTAGC 1 cut(s) 45
BsrDI GCAATG 1 cut(s) 390
BsrI ACTGG 2 cut(s) 55, 382
Bst4CI ACNGT 1 cut(s) 308
BstC8I GCNNGC 2 cut(s) 43, 83
BstDEI CTNAG 1 cut(s) 77
BstF5I GGATG 1 cut(s) 43
BtsCI GGATG 1 cut(s) 43
Cac8I GCNNGC 2 cut(s) 43, 83
Cfr13I GGNCC 1 cut(s) 235
CseI GACGC 1 cut(s) 409
CviAII CATG 2 cut(s) 59, 396
CviJI RGCY 3 cut(s) 162, 225, 387
CviKI_1 RGCY 3 cut(s) 162, 225, 387
DdeI CTNAG 1 cut(s) 77
Eco47I GGWCC 1 cut(s) 235
EcoO109I RGGNCCY 1 cut(s) 235
FaeI CATG 2 cut(s) 62, 399
FaiI YATR 8 cut(s) 60, 147, 189, 209, 274, 339, 397, 428
FaqI GGGAC 2 cut(s) 248, 277
FatI CATG 2 cut(s) 58, 395
FblI GTMKAC 1 cut(s) 200
FokI GGATG 1 cut(s) 50
FspBI CTAG 2 cut(s) 42, 261
HgaI GACGC 1 cut(s) 409
Hin1II CATG 2 cut(s) 62, 399
HincII GTYRAC 1 cut(s) 255
HindII GTYRAC 1 cut(s) 255
HpaI GTTAAC 1 cut(s) 255
Hpy166II GTNNAC 3 cut(s) 201, 255, 311
Hpy188III TCNNGA 2 cut(s) 317, 450
Hpy8I GTNNAC 3 cut(s) 201, 255, 311
HpyCH4III ACNGT 1 cut(s) 308
HpyCH4IV ACGT 1 cut(s) 251
HpyCH4V TGCA 5 cut(s) 25, 58, 245, 395, 418
HpyF3I CTNAG 1 cut(s) 77
HpySE526I ACGT 1 cut(s) 251
Hsp92II CATG 2 cut(s) 62, 399
KflI GGGWCCC 1 cut(s) 235
KspAI GTTAAC 1 cut(s) 255
LmnI GCTCC 1 cut(s) 392
LpnPI CCDG 3 cut(s) 36, 207, 363
LweI GCATC 3 cut(s) 28, 52, 405
MaeI CTAG 2 cut(s) 42, 261
MaeII ACGT 1 cut(s) 251
MaeIII GTNAC 2 cut(s) 72, 302
MboII GAAGA 2 cut(s) 361, 445
MfeI CAATTG 1 cut(s) 240
MluCI AATT 3 cut(s) 17, 126, 240
MnlI CCTC 3 cut(s) 38, 120, 334
MseI TTAA 4 cut(s) 117, 177, 213, 254
MunI CAATTG 1 cut(s) 240
NheI GCTAGC 1 cut(s) 41
NlaIII CATG 2 cut(s) 62, 399
NlaIV GGNNCC 3 cut(s) 134, 236, 237
NmuCI GTSAC 2 cut(s) 72, 302
PflMI CCANNNNNTGG 1 cut(s) 396
PpuMI RGGWCCY 1 cut(s) 235
PsiI TTATAA 1 cut(s) 147
Psp5II RGGWCCY 1 cut(s) 235
PspN4I GGNNCC 3 cut(s) 134, 236, 237
PspPI GGNCC 1 cut(s) 235
PspPPI RGGWCCY 1 cut(s) 235
SaqAI TTAA 4 cut(s) 117, 177, 213, 254
Sau96I GGNCC 1 cut(s) 235
SetI ASST 4 cut(s) 30, 134, 254, 389
SfaNI GCATC 3 cut(s) 28, 52, 405
SinI GGWCC 1 cut(s) 235
SmlI CTYRAG 1 cut(s) 157
SmoI CTYRAG 1 cut(s) 157
Sse9I AATT 3 cut(s) 17, 126, 240
SspMI CTAG 2 cut(s) 42, 261
TaaI ACNGT 1 cut(s) 308
TaiI ACGT 1 cut(s) 254
TaqI TCGA 1 cut(s) 316
TasI AATT 3 cut(s) 17, 126, 240
Tru1I TTAA 4 cut(s) 117, 177, 213, 254
Tru9I TTAA 4 cut(s) 117, 177, 213, 254
TseFI GTSAC 2 cut(s) 72, 302
Tsp45I GTSAC 2 cut(s) 72, 302
TspDTI ATGAA 2 cut(s) 30, 182
Van91I CCANNNNNTGG 1 cut(s) 396
VpaK11BI GGWCC 1 cut(s) 235
XmiI GTMKAC 1 cut(s) 200
XspI CTAG 2 cut(s) 42, 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.