Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010691

Physical Location & Seq

Genomic Coordinates Forward (+)

19520982 .. 19525155

Gene Structure 4174 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G138100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 723 bp

ATGAGCACCGGCGAGCTTCTCAGCATCGAACCCCAAGAGCTCCAATTCCCTTTTGAATTGAGGAAGCAGATCTCTTGCTCTCTACTTCTCTCCAATAAGACCGATAGCTATATAGCTTTCAAGGTAAAGACAACAAATCCCAAAAAGTATTGTGTTAGACCCAACACTGGGGTTGTGTCCCCAAGGTCTACATGTGATGTTATAGTAACAATGCAAGCACAAAAGGAAGCACCTTCGGATATGCAATGCAAGGACAAGTTCCTTCTTCAGAGCGTAGTTGCTGGCCCCGGGGCTACCCCGAAGGATATCACTCCAGAGATGTTCAATAAGGAGTCGGGGCATAATGTTGAAGAGTGTAAGTTGAGGGTTCTCTATGTTGCTCCGCCTCGGCCACCATCTCCGGTTCATGAAGGTTCAGAGGAAGGTTCGTCACCCAGGGCTTCAGTGGACAACGGGAGTGCAATTGCTTCTGAGTTTAAAGCTGCTTCAAGAGCTTTTGCCGAGCAACATGAGCCTCAAGATAACTCATCCGAGACTAGGACACTAATTGTGAGGCTGACTGAGGAGAAAAATTCTGCTATTCAGCAAAATAACAGGCTTCAGCAAGAACTGGATCTTTTGAAGCGCGGGGCCAACAGAAGCAGTAGCGGCATCCCATTTATATATGTTGTTCTAGTTGGCTTGATTGGCATTATTTTGGGGTACCTTCTGAAGAAGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000322 GO:0000325 GO:0000326 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005783 GO:0005789 GO:0005829 GO:0005886 GO:0006605 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0031224 GO:0031984 GO:0033036 GO:0034613 GO:0042175 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Motile_Sperm

Protein Analysis

241

Amino Acids

26.41

Weight (kDa)

8.22

Isoelectric Point (pI)

58.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010691)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45140 AT2G45140 AT3G60600 AT3G60600
fragaria_vesca	FvH4_7g11090
malus_domestica	MD02G1210500.v1.1 MD07G1115600.v1.1
prunus_persica	Prupe.2G138100_v2.0.a1
pyrus_communis	pycom02g17230 pycom07g10890
rosa_chinensis	RchiOBHm_Chr1g0349111
rosa_laevigata	RLG00000028605
rosa_multiflora	Rmu_sc0008324.1_g000004 Rmu_sc0012100.1_g000006
rosa_roxburghii	Rroxscaffold_4G00306110
rosa_rugosa	Rorug01G0200200
rosa_samantha	Rh1AG217900 Rh1BG183500 Rh1CG202300
rosa_wichuraiana	Rw1G018520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	702
AccB1I	GGYRCC	1 cut(s)	702
AccI	GTMKAC	1 cut(s)	188
AccII	CGCG	1 cut(s)	627
AciI	CCGC	3 cut(s)	383, 627, 648
AclWI	GGATC	1 cut(s)	621
AcoI	YGGCCR	1 cut(s)	389
AcsI	RAATTY	1 cut(s)	571
AcuI	CTGAAG	3 cut(s)	251, 426, 584
AfaI	GTAC	1 cut(s)	704
AfiI	CCNNNNNNNGG	3 cut(s)	167, 168, 537
AflIII	ACRYGT	1 cut(s)	191
AgsI	TTSAA	6 cut(s)	56, 121, 325, 350, 489, 622
AjnI	CCWGG	1 cut(s)	434
AluBI	AGCT	6 cut(s)	16, 40, 108, 116, 482, 494
AluI	AGCT	6 cut(s)	16, 40, 108, 116, 482, 494
Alw21I	GWGCWC	2 cut(s)	8, 42
Alw26I	GTCTC	1 cut(s)	527
AlwI	GGATC	1 cut(s)	621
Ama87I	CYCGRG	1 cut(s)	287
AoxI	GGCC	3 cut(s)	283, 389, 630
ApeKI	GCWGC	1 cut(s)	482
ApoI	RAATTY	1 cut(s)	571
Asp718I	GGTACC	1 cut(s)	702
AspLEI	GCGC	1 cut(s)	627
AspS9I	GGNCC	2 cut(s)	284, 630
AsuC2I	CCSGG	2 cut(s)	288, 289
AsuHPI	GGTGA	1 cut(s)	423
AvaI	CYCGRG	1 cut(s)	287
BanI	GGYRCC	1 cut(s)	702
BanII	GRGCYC	1 cut(s)	42
Bbv12I	GWGCWC	2 cut(s)	8, 42
BbvI	GCAGC	1 cut(s)	469
BccI	CCATC	1 cut(s)	403
BciT130I	CCWGG	1 cut(s)	436
BcnI	CCSGG	2 cut(s)	288, 289
BcoDI	GTCTC	1 cut(s)	527
BfaI	CTAG	2 cut(s)	537, 674
BglII	AGATCT	1 cut(s)	69
BisI	GCNGC	2 cut(s)	483, 649
BlsI	GCNGC	2 cut(s)	484, 650
Bme1390I	CCNGG	3 cut(s)	288, 289, 436
BmeT110I	CYCGRG	1 cut(s)	287
BmgT120I	GGNCC	2 cut(s)	284, 630
BmiI	GGNNCC	3 cut(s)	286, 631, 704
BmrFI	CCNGG	3 cut(s)	288, 289, 436
BmrI	ACTGGG	1 cut(s)	177
BmsI	GCATC	2 cut(s)	33, 660
BmuI	ACTGGG	1 cut(s)	177
BpmI	CTGGAG	1 cut(s)	297
BpuEI	CTTGAG	1 cut(s)	501
BpuMI	CCSGG	2 cut(s)	288, 289
BsaJI	CCNNGG	7 cut(s)	182, 286, 287, 288, 386, 434, 435
BsaWI	WCCGGW	1 cut(s)	400
Bsc4I	CCNNNNNNNGG	3 cut(s)	167, 168, 537
Bse118I	RCCGGY	1 cut(s)	8
Bse1I	ACTGG	2 cut(s)	172, 615
Bse3DI	GCAATG	1 cut(s)	251
BseBI	CCWGG	1 cut(s)	436
BseDI	CCNNGG	7 cut(s)	182, 286, 287, 288, 386, 434, 435
BseGI	GGATG	2 cut(s)	527, 651
BseLI	CCNNNNNNNGG	3 cut(s)	167, 168, 537
BseMI	GCAATG	1 cut(s)	251
BseMII	CTCAG	3 cut(s)	34, 462, 552
BseNI	ACTGG	2 cut(s)	172, 615
BseRI	GAGGAG	1 cut(s)	578
BseXI	GCAGC	1 cut(s)	469
Bsh1236I	CGCG	1 cut(s)	627
BshFI	GGCC	3 cut(s)	285, 391, 632
BshNI	GGYRCC	1 cut(s)	702
BsiHKAI	GWGCWC	2 cut(s)	8, 42
BsiHKCI	CYCGRG	1 cut(s)	287
BsiSI	CCGG	3 cut(s)	9, 288, 401
BslFI	GGGAC	1 cut(s)	163
BslI	CCNNNNNNNGG	3 cut(s)	167, 168, 537
BsmAI	GTCTC	1 cut(s)	527
BsmFI	GGGAC	1 cut(s)	163
BsnI	GGCC	3 cut(s)	285, 391, 632
BsoBI	CYCGRG	1 cut(s)	287
Bsp1286I	GDGCHC	2 cut(s)	8, 42
Bsp143I	GATC	2 cut(s)	69, 613
BspACI	CCGC	3 cut(s)	383, 627, 648
BspANI	GGCC	3 cut(s)	285, 391, 632
BspCNI	CTCAG	3 cut(s)	33, 463, 553
BspFNI	CGCG	1 cut(s)	627
BspHI	TCATGA	1 cut(s)	406
BspLI	GGNNCC	3 cut(s)	286, 631, 704
BspPI	GGATC	1 cut(s)	621
BspT107I	GGYRCC	1 cut(s)	702
BsrDI	GCAATG	1 cut(s)	251
BsrFI	RCCGGY	1 cut(s)	8
BsrI	ACTGG	2 cut(s)	172, 615
BssAI	RCCGGY	1 cut(s)	8
BssECI	CCNNGG	7 cut(s)	182, 286, 287, 288, 386, 434, 435
BssMI	GATC	2 cut(s)	69, 613
BssT1I	CCWWGG	1 cut(s)	182
Bst2UI	CCWGG	1 cut(s)	436
Bst6I	CTCTTC	1 cut(s)	345
BstC8I	GCNNGC	3 cut(s)	14, 216, 283
BstDEI	CTNAG	3 cut(s)	20, 471, 561
BstF5I	GGATG	2 cut(s)	527, 651
BstFNI	CGCG	1 cut(s)	627
BstHHI	GCGC	1 cut(s)	627
BstKTI	GATC	2 cut(s)	72, 616
BstMAI	GTCTC	1 cut(s)	527
BstMBI	GATC	2 cut(s)	69, 613
BstMWI	GCNNNNNNNGC	4 cut(s)	491, 511, 648, 687
BstNI	CCWGG	1 cut(s)	436
BstNSI	RCATGY	1 cut(s)	195
BstSCI	CCNGG	3 cut(s)	286, 287, 434
BstUI	CGCG	1 cut(s)	627
BstV1I	GCAGC	1 cut(s)	469
BstX2I	RGATCY	2 cut(s)	69, 613
BstYI	RGATCY	2 cut(s)	69, 613
BsuRI	GGCC	3 cut(s)	285, 391, 632
BtsCI	GGATG	2 cut(s)	527, 651
BtsIMutI	CAGTG	2 cut(s)	165, 450
Cac8I	GCNNGC	3 cut(s)	14, 216, 283
CciI	TCATGA	1 cut(s)	406
CfoI	GCGC	1 cut(s)	627
Cfr10I	RCCGGY	1 cut(s)	8
Cfr13I	GGNCC	2 cut(s)	284, 630
Cfr9I	CCCGGG	1 cut(s)	287
Csp6I	GTAC	1 cut(s)	703
CviAII	CATG	4 cut(s)	192, 407, 509, 720
CviQI	GTAC	1 cut(s)	703
DdeI	CTNAG	3 cut(s)	20, 471, 561
DpnI	GATC	2 cut(s)	71, 615
DpnII	GATC	2 cut(s)	69, 613
DraI	TTTAAA	1 cut(s)	478
EaeI	YGGCCR	1 cut(s)	389
Eam1104I	CTCTTC	1 cut(s)	345
EarI	CTCTTC	1 cut(s)	345
EciI	GGCGGA	1 cut(s)	372
Ecl136II	GAGCTC	1 cut(s)	40
Eco130I	CCWWGG	1 cut(s)	182
Eco24I	GRGCYC	1 cut(s)	42
Eco32I	GATATC	1 cut(s)	307
Eco53kI	GAGCTC	1 cut(s)	40
Eco57I	CTGAAG	3 cut(s)	251, 426, 584
Eco88I	CYCGRG	1 cut(s)	287
EcoICRI	GAGCTC	1 cut(s)	40
EcoRII	CCWGG	1 cut(s)	434
EcoRV	GATATC	1 cut(s)	307
EcoT14I	CCWWGG	1 cut(s)	182
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	1 cut(s)	182
FaeI	CATG	4 cut(s)	195, 410, 512, 723
FaqI	GGGAC	1 cut(s)	163
FatI	CATG	4 cut(s)	191, 406, 508, 719
FauI	CCCGC	1 cut(s)	620
FblI	GTMKAC	1 cut(s)	188
Fnu4HI	GCNGC	2 cut(s)	483, 649
FokI	GGATG	2 cut(s)	514, 638
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	2 cut(s)	483, 649
FspBI	CTAG	2 cut(s)	537, 674
GlaI	GCGC	1 cut(s)	626
GluI	GCNGC	2 cut(s)	483, 649
GsuI	CTGGAG	1 cut(s)	297
HaeIII	GGCC	3 cut(s)	285, 391, 632
HapII	CCGG	3 cut(s)	9, 288, 401
HhaI	GCGC	1 cut(s)	627
Hin1II	CATG	4 cut(s)	195, 410, 512, 723
Hin6I	GCGC	1 cut(s)	625
HinP1I	GCGC	1 cut(s)	625
HinfI	GANTC	1 cut(s)	332
HpaII	CCGG	3 cut(s)	9, 288, 401
HphI	GGTGA	1 cut(s)	423
Hpy166II	GTNNAC	2 cut(s)	189, 448
Hpy188I	TCNGA	6 cut(s)	238, 270, 418, 472, 532, 711
Hpy188III	TCNNGA	4 cut(s)	314, 407, 489, 518
Hpy8I	GTNNAC	2 cut(s)	189, 448
HpyAV	CCTTC	6 cut(s)	243, 272, 295, 404, 416, 716
HpyCH4V	TGCA	4 cut(s)	214, 244, 249, 461
HpyF10VI	GCNNNNNNNGC	4 cut(s)	491, 511, 648, 687
HpyF3I	CTNAG	3 cut(s)	20, 471, 561
Hsp92II	CATG	4 cut(s)	195, 410, 512, 723
HspAI	GCGC	1 cut(s)	625
KpnI	GGTACC	1 cut(s)	706
Kzo9I	GATC	2 cut(s)	69, 613
LmnI	GCTCC	2 cut(s)	45, 385
Lsp1109I	GCAGC	1 cut(s)	469
LweI	GCATC	2 cut(s)	33, 660
MaeI	CTAG	2 cut(s)	537, 674
MaeIII	GTNAC	2 cut(s)	205, 429
MalI	GATC	2 cut(s)	71, 615
MboI	GATC	2 cut(s)	69, 613
MboII	GAAGA	2 cut(s)	257, 362
MfeI	CAATTG	1 cut(s)	462
MflI	RGATCY	2 cut(s)	69, 613
MhlI	GDGCHC	2 cut(s)	8, 42
MluCI	AATT	5 cut(s)	44, 56, 462, 546, 571
MlyI	GAGTC	1 cut(s)	341
MnlI	CCTC	7 cut(s)	54, 357, 396, 412, 525, 546, 556
MseI	TTAA	1 cut(s)	477
MspI	CCGG	3 cut(s)	9, 288, 401
MspR9I	CCNGG	3 cut(s)	288, 289, 436
MunI	CAATTG	1 cut(s)	462
MvaI	CCWGG	1 cut(s)	436
MvnI	CGCG	1 cut(s)	627
MwoI	GCNNNNNNNGC	4 cut(s)	491, 511, 648, 687
NciI	CCSGG	2 cut(s)	288, 289
NdeII	GATC	2 cut(s)	69, 613
NlaIII	CATG	4 cut(s)	195, 410, 512, 723
NlaIV	GGNNCC	3 cut(s)	286, 631, 704
NmeAIII	GCCGAG	2 cut(s)	367, 526
NmuCI	GTSAC	1 cut(s)	429
NspI	RCATGY	1 cut(s)	195
PagI	TCATGA	1 cut(s)	406
PasI	CCCWGGG	1 cut(s)	435
PciI	ACATGT	1 cut(s)	191
PkrI	GCNGC	2 cut(s)	484, 650
PleI	GAGTC	1 cut(s)	340
PpsI	GAGTC	1 cut(s)	340
PscI	ACATGT	1 cut(s)	191
Psp124BI	GAGCTC	1 cut(s)	42
Psp6I	CCWGG	1 cut(s)	434
PspGI	CCWGG	1 cut(s)	434
PspN4I	GGNNCC	3 cut(s)	286, 631, 704
PspPI	GGNCC	2 cut(s)	284, 630
PsuI	RGATCY	2 cut(s)	69, 613
RsaI	GTAC	1 cut(s)	704
RsaNI	GTAC	1 cut(s)	703
SacI	GAGCTC	1 cut(s)	42
SaqAI	TTAA	1 cut(s)	477
SatI	GCNGC	2 cut(s)	483, 649
Sau3AI	GATC	2 cut(s)	69, 613
Sau96I	GGNCC	2 cut(s)	284, 630
SchI	GAGTC	1 cut(s)	341
ScrFI	CCNGG	3 cut(s)	288, 289, 436
SduI	GDGCHC	2 cut(s)	8, 42
SfaNI	GCATC	2 cut(s)	33, 660
SgrAI	CRCCGGYG	1 cut(s)	8
SmaI	CCCGGG	1 cut(s)	289
SmlI	CTYRAG	1 cut(s)	516
SmoI	CTYRAG	1 cut(s)	516
Sse9I	AATT	5 cut(s)	44, 56, 462, 546, 571
SsiI	CCGC	3 cut(s)	383, 627, 648
SspMI	CTAG	2 cut(s)	537, 674
SstI	GAGCTC	1 cut(s)	42
StyD4I	CCNGG	3 cut(s)	286, 287, 434
StyI	CCWWGG	1 cut(s)	182
TaqI	TCGA	1 cut(s)	27
TaqII	GACCGA	1 cut(s)	116
TasI	AATT	5 cut(s)	44, 56, 462, 546, 571
TauI	GCSGC	1 cut(s)	651
Tru1I	TTAA	1 cut(s)	477
Tru9I	TTAA	1 cut(s)	477
TscAI	CASTG	2 cut(s)	172, 450
TseFI	GTSAC	1 cut(s)	429
TseI	GCWGC	1 cut(s)	482
Tsp45I	GTSAC	1 cut(s)	429
TspDTI	ATGAA	2 cut(s)	395, 423
TspMI	CCCGGG	1 cut(s)	287
TspRI	CASTG	2 cut(s)	172, 450
XapI	RAATTY	1 cut(s)	571
XceI	RCATGY	1 cut(s)	195
XcmI	CCANNNNNNNNNTGG	1 cut(s)	442
XmaI	CCCGGG	1 cut(s)	287
XmiI	GTMKAC	1 cut(s)	188
XspI	CTAG	2 cut(s)	537, 674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.